Motif ID: CCAGCAU

Z-value: 0.555


Mature miRNA associated with seed CCAGCAU:

NamemiRBase Accession
hsa-miR-338-3p MIMAT0000763



Activity profile for motif CCAGCAU.

activity profile for motif CCAGCAU


Sorted Z-values histogram for motif CCAGCAU

Sorted Z-values for motif CCAGCAU



Network of associatons between targets according to the STRING database.



First level regulatory network of CCAGCAU

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_-_160990971 0.419 NM_016946
F11R
F11 receptor
chr10_-_123356158 0.387 NM_001144915
FGFR2
fibroblast growth factor receptor 2
chr10_-_123353771 0.360 NM_001144916
FGFR2
fibroblast growth factor receptor 2
chr3_-_56809594 0.360 NM_001128616
ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
chr3_-_56835829 0.359 NM_019555
ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
chr3_-_57113292 0.343 NM_001128615
ARHGEF3
Rho guanine nucleotide exchange factor (GEF) 3
chr1_+_109792640 0.282 NM_001408
CELSR2
cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)
chr16_-_75528925 0.238 NM_021615
CHST6
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
chr11_+_100557851 0.206 NM_152432
ARHGAP42
Rho GTPase activating protein 42
chr10_-_105614952 0.189 NM_014631
SH3PXD2A
SH3 and PX domains 2A
chr10_-_105845619 0.187 NM_000494
COL17A1
collagen, type XVII, alpha 1
chr6_-_99797530 0.183 NM_032511
C6orf168
chromosome 6 open reading frame 168
chr10_-_73533196 0.171 NM_022153
C10orf54
chromosome 10 open reading frame 54
chr8_-_17579729 0.170 NM_001001931
MTUS1
microtubule associated tumor suppressor 1
chr16_+_68771192 0.169 NM_004360
CDH1
cadherin 1, type 1, E-cadherin (epithelial)
chr11_-_16497917 0.165 NM_033326
SOX6
SRY (sex determining region Y)-box 6
chr8_-_17555158 0.163 NM_020749
MTUS1
microtubule associated tumor suppressor 1
chr8_-_17580024 0.161 NM_001166393
MTUS1
microtubule associated tumor suppressor 1
chr11_-_16430425 0.160 NM_001145811
SOX6
SRY (sex determining region Y)-box 6
chr10_-_123357503 0.159 NM_000141
NM_001144917
NM_001144918
NM_001144919
NM_022970
FGFR2




fibroblast growth factor receptor 2




chr8_-_17658385 0.159 NM_001001924
NM_001001925
MTUS1

microtubule associated tumor suppressor 1

chr4_+_77356252 0.157 NM_020859
SHROOM3
shroom family member 3
chr1_+_95558072 0.147 NM_001199679
TMEM56
transmembrane protein 56
chr14_+_70078309 0.146 NM_014734
KIAA0247
KIAA0247
chr11_-_16424391 0.145 NM_001145819
NM_017508
SOX6

SRY (sex determining region Y)-box 6

chr1_-_209979388 0.145 NM_001206696
NM_006147
IRF6

interferon regulatory factor 6

chr10_-_123353330 0.145 NM_001144913
NM_001144914
FGFR2

fibroblast growth factor receptor 2

chr7_+_145813452 0.144 NM_014141
CNTNAP2
contactin associated protein-like 2
chr12_-_58160823 0.139 NM_000785
CYP27B1
cytochrome P450, family 27, subfamily B, polypeptide 1
chr7_-_156803224 0.139 NM_005515
MNX1
motor neuron and pancreas homeobox 1
chr6_-_39197225 0.134 NM_003740
KCNK5
potassium channel, subfamily K, member 5
chr1_-_201368617 0.131 NM_005558
LAD1
ladinin 1
chr19_-_49258646 0.125 NM_000148
FUT1
fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)
chr2_+_64681270 0.124 NM_014181
LGALSL
lectin, galactoside-binding-like
chr11_+_32851469 0.124 NM_024081
PRRG4
proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
chr1_-_38273852 0.121 NM_024640
YRDC
yrdC domain containing (E. coli)
chr1_+_95582827 0.120 NM_152487
TMEM56
transmembrane protein 56
chr4_+_153864134 0.114 NM_033393
FHDC1
FH2 domain containing 1
chr20_-_41818464 0.113 NM_007050
NM_133170
PTPRT

protein tyrosine phosphatase, receptor type, T

chr2_+_131674223 0.113 NM_015320
NM_032995
ARHGEF4

Rho guanine nucleotide exchange factor (GEF) 4

chr11_-_123525300 0.111 NM_001040151
NM_018400
SCN3B

sodium channel, voltage-gated, type III, beta

chr1_-_93426998 0.109 NM_001006605
NM_001252269
NM_001252270
NM_001252273
FAM69A



family with sequence similarity 69, member A



chr7_-_36406446 0.109 NM_001199707
NM_001199706
NM_015314
NM_001199708
KIAA0895



KIAA0895



chr7_-_156801980 0.109 NM_001165255
MNX1
motor neuron and pancreas homeobox 1
chr11_+_58939539 0.107 NM_015177
DTX4
deltex homolog 4 (Drosophila)
chr8_+_28351694 0.106 NM_017412
NM_145866
FZD3

frizzled family receptor 3

chr7_-_36429695 0.105 NM_001100425
KIAA0895
KIAA0895
chr20_+_58630965 0.103 NM_173644
C20orf197
chromosome 20 open reading frame 197
chr16_+_50321822 0.102 NM_001114
ADCY7
adenylate cyclase 7
chr2_-_216003068 0.101 NM_173076
ABCA12
ATP-binding cassette, sub-family A (ABC1), member 12
chr6_+_21593963 0.100 NM_003107
SOX4
SRY (sex determining region Y)-box 4
chr2_-_215896809 0.098 NM_015657
ABCA12
ATP-binding cassette, sub-family A (ABC1), member 12
chr9_+_124329398 0.096 NM_032552
DAB2IP
DAB2 interacting protein
chr1_+_233463513 0.094 NM_032435
KIAA1804
mixed lineage kinase 4
chr17_-_3599487 0.093 NM_001204519
NM_001204520
NM_002561
NM_175080
P2RX5-TAX1BP3
P2RX5



P2RX5-TAX1BP3 readthrough
purinergic receptor P2X, ligand-gated ion channel, 5



chr1_-_175161832 0.091 NM_001162895
NM_014656
NM_001162893
NM_001162894
KIAA0040



KIAA0040



chr1_-_154531083 0.091 NM_017582
UBE2Q1
ubiquitin-conjugating enzyme E2Q family member 1
chr3_+_186739643 0.091 NM_003032
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr3_+_186648273 0.091 NM_173216
NM_173217
ST6GAL1

ST6 beta-galactosamide alpha-2,6-sialyltranferase 1

chr17_-_38657814 0.089 NM_032865
TNS4
tensin 4
chr11_-_79151694 0.088 NM_001098816
ODZ4
odz, odd Oz/ten-m homolog 4 (Drosophila)
chr18_-_53255734 0.087 NM_001083962
NM_001243230
NM_003199
TCF4


transcription factor 4


chr3_+_118892363 0.087 NM_006952
UPK1B
uroplakin 1B
chr14_-_94856926 0.087 NM_001002235
NM_001002236
NM_001127700
NM_001127701
NM_001127702
NM_001127703
NM_001127704
NM_001127705
NM_001127706
NM_001127707
SERPINA1









serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1









chr20_+_51588945 0.087 NM_173485
TSHZ2
teashirt zinc finger homeobox 2
chr14_-_95786095 0.083 NM_024734
CLMN
calmin (calponin-like, transmembrane)
chr14_-_94855120 0.082 NM_000295
SERPINA1
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
chr11_+_44785975 0.082 NM_130783
TSPAN18
tetraspanin 18
chr20_+_51801821 0.082 NM_001193421
TSHZ2
teashirt zinc finger homeobox 2
chr3_-_9291251 0.081 NM_001033117
NM_014850
SRGAP3

SLIT-ROBO Rho GTPase activating protein 3

chr1_-_85514174 0.081 NM_001253693
NM_018298
MCOLN3

mucolipin 3

chr18_+_47088400 0.080 NM_006033
LIPG
lipase, endothelial
chr12_+_13043955 0.080 NM_003979
GPRC5A
G protein-coupled receptor, family C, group 5, member A
chr1_+_65613771 0.079 NM_013410
AK4
adenylate kinase 4
chr11_-_128894008 0.078 NM_014715
ARHGAP32
Rho GTPase activating protein 32
chr1_+_167599329 0.078 NM_052862
RCSD1
RCSD domain containing 1
chr15_+_73976621 0.078 NM_001024736
NM_025240
CD276

CD276 molecule

chr1_+_65613211 0.077 NM_203464
NM_001005353
AK4

adenylate kinase 4

chr10_-_45474210 0.077 NM_007021
C10orf10
chromosome 10 open reading frame 10
chr2_-_238499713 0.077 NM_022449
RAB17
RAB17, member RAS oncogene family
chr1_-_202679415 0.076 NM_177402
SYT2
synaptotagmin II
chr10_-_104211244 0.076 NM_024886
C10orf95
chromosome 10 open reading frame 95
chr5_+_149109814 0.076 NM_001172698
NM_133263
PPARGC1B

peroxisome proliferator-activated receptor gamma, coactivator 1 beta

chr2_-_235405692 0.075 NM_005737
ARL4C
ADP-ribosylation factor-like 4C
chr14_+_75745480 0.074 NM_005252
FOS
FBJ murine osteosarcoma viral oncogene homolog
chr4_+_78978723 0.074 NM_001166133
NM_025074
FRAS1

Fraser syndrome 1

chr1_+_156254069 0.074 NM_032323
TMEM79
transmembrane protein 79
chr9_-_126030854 0.073 NM_001171137
STRBP
spermatid perinuclear RNA binding protein
chr15_-_63674074 0.073 NM_001218
NM_206925
CA12

carbonic anhydrase XII

chr2_+_95940195 0.073 NM_001165977
NM_001165978
NM_144707
PROM2


prominin 2


chr11_+_117947726 0.072 NM_001083947
NM_001173551
NM_001173552
NM_019894
TMPRSS4



transmembrane protease, serine 4



chr12_-_12715244 0.072 NM_030640
DUSP16
dual specificity phosphatase 16
chr7_-_20256942 0.071 NM_182762
MACC1
metastasis associated in colon cancer 1
chr1_-_6662898 0.071 NM_014851
KLHL21
kelch-like 21 (Drosophila)
chr7_-_139876718 0.071 NM_030647
JHDM1D
jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)
chr19_+_34287662 0.071 NM_001129994
NM_001129995
NM_024076
KCTD15


potassium channel tetramerisation domain containing 15


chr15_-_72490109 0.070 NM_001012642
GRAMD2
GRAM domain containing 2
chr1_-_202612580 0.070 NM_001136504
SYT2
synaptotagmin II
chr15_-_79237353 0.069 NM_004390
CTSH
cathepsin H
chr20_-_50384899 0.069 NM_006045
ATP9A
ATPase, class II, type 9A
chr5_+_149151502 0.069 NM_001172699
PPARGC1B
peroxisome proliferator-activated receptor gamma, coactivator 1 beta
chr6_+_27215479 0.068 NM_005865
PRSS16
protease, serine, 16 (thymus)
chr9_+_22446783 0.067 NM_022160
DMRTA1
DMRT-like family A1
chr6_-_143266283 0.067 NM_006734
HIVEP2
human immunodeficiency virus type I enhancer binding protein 2
chr5_-_148442606 0.067 NM_024577
SH3TC2
SH3 domain and tetratricopeptide repeats 2
chr1_-_204459445 0.067 NM_002646
PIK3C2B
phosphoinositide-3-kinase, class 2, beta polypeptide
chr12_+_11802726 0.064 NM_001987
ETV6
ets variant 6
chr3_+_50192847 0.064 NM_004186
SEMA3F
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr17_+_47653176 0.063 NM_007225
NXPH3
neurexophilin 3
chr8_-_95274540 0.063 NM_005261
NM_181702
GEM

GTP binding protein overexpressed in skeletal muscle

chr11_-_129062092 0.063 NM_001142685
ARHGAP32
Rho GTPase activating protein 32
chr10_+_28966419 0.063 NM_012342
BAMBI
BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)
chr10_-_50970321 0.061 NM_001143996
NM_001143997
NM_018245
OGDHL


oxoglutarate dehydrogenase-like


chr9_-_126030792 0.061 NM_018387
STRBP
spermatid perinuclear RNA binding protein
chr11_-_88070905 0.060 NM_001114173
NM_001814
NM_148170
CTSC


cathepsin C


chr18_+_29598444 0.060 NM_017831
RNF125
ring finger protein 125
chr4_+_120133764 0.060 NM_019050
USP53
ubiquitin specific peptidase 53
chr7_-_51384458 0.060 NM_015198
COBL
cordon-bleu homolog (mouse)
chr14_+_103243813 0.058 NM_001199427
NM_003300
NM_145725
NM_145726
TRAF3



TNF receptor-associated factor 3



chr14_-_92333856 0.058 NM_001128596
TC2N
tandem C2 domains, nuclear
chr11_+_130318457 0.057 NM_139055
ADAMTS15
ADAM metallopeptidase with thrombospondin type 1 motif, 15
chr8_-_22550708 0.057 NM_004430
EGR3
early growth response 3
chr2_+_46524448 0.056 NM_001430
EPAS1
endothelial PAS domain protein 1
chr10_+_129705299 0.055 NM_006504
PTPRE
protein tyrosine phosphatase, receptor type, E
chr14_-_92302612 0.054 NM_001128595
NM_152332
TC2N

tandem C2 domains, nuclear

chr7_-_108096693 0.054 NM_001193582
NM_001193583
NM_001193584
NM_005010
NRCAM



neuronal cell adhesion molecule



chr17_+_8924822 0.054 NM_004822
NTN1
netrin 1
chr5_-_175964223 0.053 NM_014901
RNF44
ring finger protein 44
chr7_+_23636970 0.053 NM_138771
CCDC126
coiled-coil domain containing 126
chr1_-_167523016 0.053 NM_003851
CREG1
cellular repressor of E1A-stimulated genes 1
chr8_-_22550057 0.053 NM_001199881
EGR3
early growth response 3
chr8_-_22549901 0.052 NM_001199880
EGR3
early growth response 3
chr3_+_127641901 0.052 NM_207335
KBTBD12
kelch repeat and BTB (POZ) domain containing 12
chr21_+_33245304 0.052 NM_014586
HUNK
hormonally up-regulated Neu-associated kinase
chr11_-_115375065 0.051 NM_001098517
NM_014333
CADM1

cell adhesion molecule 1

chr18_+_43753986 0.051 NM_001008239
NM_145055
C18orf25

chromosome 18 open reading frame 25

chr2_+_7057471 0.051 NM_014746
RNF144A
ring finger protein 144A
chr6_+_14117857 0.051 NM_001040280
NM_004233
CD83

CD83 molecule

chr2_-_20425166 0.050 NM_001006946
SDC1
syndecan 1
chrX_+_49126299 0.050 NM_001184745
NM_033215
PPP1R3F

protein phosphatase 1, regulatory subunit 3F

chr6_+_47624222 0.050 NM_153839
GPR111
G protein-coupled receptor 111
chr15_+_94841429 0.050 NM_001159643
NM_018349
MCTP2

multiple C2 domains, transmembrane 2

chr10_+_129845806 0.050 NM_130435
PTPRE
protein tyrosine phosphatase, receptor type, E
chr1_-_9970265 0.050 NM_001012329
NM_020248
CTNNBIP1

catenin, beta interacting protein 1

chr12_-_57400199 0.050 NM_014830
ZBTB39
zinc finger and BTB domain containing 39
chr8_-_130799133 0.049 NM_031415
GSDMC
gasdermin C
chr11_-_118023534 0.049 NM_001142348
NM_174934
SCN4B

sodium channel, voltage-gated, type IV, beta

chr10_-_1779669 0.049 NM_018702
ADARB2
adenosine deaminase, RNA-specific, B2
chr10_+_85933553 0.049 NM_207373
C10orf99
chromosome 10 open reading frame 99
chr11_-_118016134 0.048 NM_001142349
SCN4B
sodium channel, voltage-gated, type IV, beta
chr19_+_12902295 0.047 NM_002229
JUNB
jun B proto-oncogene
chr15_-_33360084 0.047 NM_001103184
FMN1
formin 1
chr1_+_167189948 0.047 NM_001198786
NM_002697
POU2F1

POU class 2 homeobox 1

chr22_+_26825220 0.045 NM_020437
ASPHD2
aspartate beta-hydroxylase domain containing 2
chr3_-_143567163 0.045 NM_173653
SLC9A9
solute carrier family 9 (sodium/hydrogen exchanger), member 9
chr19_+_41222915 0.045 NM_025194
ITPKC
inositol-trisphosphate 3-kinase C
chr2_-_20424627 0.045 NM_002997
SDC1
syndecan 1
chr8_+_21912327 0.045 NM_001114136
NM_001114139
EPB49

erythrocyte membrane protein band 4.9 (dematin)

chr4_-_84030995 0.044 NM_001130716
PLAC8
placenta-specific 8
chr19_-_6110561 0.044 NM_000635
NM_134433
RFX2

regulatory factor X, 2 (influences HLA class II expression)

chr18_+_59992519 0.044 NM_003839
TNFRSF11A
tumor necrosis factor receptor superfamily, member 11a, NFKB activator
chr18_+_55714457 0.044 NM_001144964
NEDD4L
neural precursor cell expressed, developmentally down-regulated 4-like
chr5_+_63802427 0.044 NM_001029875
RGS7BP
regulator of G-protein signaling 7 binding protein
chr6_-_24383519 0.044 NM_001195610
DCDC2
doublecortin domain containing 2
chr1_+_11714431 0.044 NM_183412
FBXO44
F-box protein 44
chr20_-_1306512 0.043 NM_001199784
SDCBP2
syndecan binding protein (syntenin) 2
chr12_+_31079837 0.043 NM_001080509
TSPAN11
tetraspanin 11
chr8_+_75736771 0.043 NM_015886
PI15
peptidase inhibitor 15
chr17_+_7342688 0.043 NM_004112
FGF11
fibroblast growth factor 11
chr1_-_203320287 0.042 NM_002023
FMOD
fibromodulin
chr8_+_21915371 0.041 NM_001114135
EPB49
erythrocyte membrane protein band 4.9 (dematin)
chr2_+_238536183 0.041 NM_001137550
LRRFIP1
leucine rich repeat (in FLII) interacting protein 1
chr8_+_21916685 0.041 NM_001114138
NM_001978
EPB49

erythrocyte membrane protein band 4.9 (dematin)

chr19_-_6459735 0.041 NM_024103
SLC25A23
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr1_+_156123321 0.040 NM_001193300
NM_022367
NM_001193302
SEMA4A


sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A


chr4_-_139163222 0.040 NM_014331
SLC7A11
solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
chr13_+_80055257 0.040 NM_001161407
NM_019080
NDFIP2

Nedd4 family interacting protein 2

chr22_+_38302085 0.040 NM_033386
MICALL1
MICAL-like 1
chr22_+_25960738 0.040 NM_005160
ADRBK2
adrenergic, beta, receptor kinase 2
chr14_+_92790151 0.040 NM_153646
SLC24A4
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
chr3_+_126707380 0.040 NM_032242
PLXNA1
plexin A1
chr2_-_72374919 0.040 NM_019885
CYP26B1
cytochrome P450, family 26, subfamily B, polypeptide 1
chr8_+_21911062 0.039 NM_001114137
EPB49
erythrocyte membrane protein band 4.9 (dematin)
chr18_+_55711388 0.039 NM_001144967
NM_001243960
NM_015277
NEDD4L


neural precursor cell expressed, developmentally down-regulated 4-like


chr7_+_150147936 0.039 NM_175571
GIMAP8
GTPase, IMAP family member 8
chr3_-_128840605 0.039 NM_001204886
NM_001204887
NM_001204888
NM_198490
NM_001204885
RAB43




RAB43, member RAS oncogene family




chr13_-_76055872 0.039 NM_014832
TBC1D4
TBC1 domain family, member 4
chr1_+_156119734 0.039 NM_001193301
SEMA4A
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
chr20_-_1294111 0.038 NM_015685
SDCBP2
syndecan binding protein (syntenin) 2
chr3_-_128840856 0.038 NM_001204884
NM_001204883
RAB43

RAB43, member RAS oncogene family

chr18_+_55862577 0.038 NM_001144970
NEDD4L
neural precursor cell expressed, developmentally down-regulated 4-like
chr19_-_47290541 0.038 NM_001145144
SLC1A5
solute carrier family 1 (neutral amino acid transporter), member 5
chr14_-_38064440 0.038 NM_004496
FOXA1
forkhead box A1
chr6_+_116692098 0.038 NM_013352
DSE
dermatan sulfate epimerase
chr6_-_24358279 0.038 NM_016356
DCDC2
doublecortin domain containing 2
chrX_-_8700170 0.038 NM_000216
KAL1
Kallmann syndrome 1 sequence
chr1_+_16091458 0.038 NM_001024216
FBLIM1
filamin binding LIM protein 1
chr2_-_73496595 0.038 NM_001080410
FBXO41
F-box protein 41
chr9_+_97136817 0.037 NM_032558
HIATL1
hippocampus abundant transcript-like 1
chr1_-_89738477 0.037 NM_001134486
NM_052942
GBP5

guanylate binding protein 5


Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
3.44 5.16e-03 GO:0006814 sodium ion transport
1.35 5.99e-03 GO:0023052 signaling
1.72 2.04e-02 GO:0007154 cell communication
2.07 2.66e-02 GO:0030001 metal ion transport
2.05 3.11e-02 GO:0019226 transmission of nerve impulse
2.05 3.11e-02 GO:0035637 multicellular organismal signaling
1.45 3.30e-02 GO:0065008 regulation of biological quality

Nothing significant found in compartment category.

Gene overrepresentation in function category:

enrichment   p-value GO term description
4.75 2.88e-03 GO:0015300 solute:solute antiporter activity
1.97 4.77e-03 GO:0008324 cation transmembrane transporter activity
2.44 6.54e-03 GO:0005261 cation channel activity
4.12 1.35e-02 GO:0015297 antiporter activity
2.91 2.22e-02 GO:0022843 voltage-gated cation channel activity
2.57 2.45e-02 GO:0015291 secondary active transmembrane transporter activity
2.58 3.32e-02 GO:0005244 voltage-gated ion channel activity
2.58 3.32e-02 GO:0022832 voltage-gated channel activity
1.67 3.37e-02 GO:0022891 substrate-specific transmembrane transporter activity