hg19_v2_chr10_+_31608054_31608156	1.31716	AACACUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr11_+_113930291_113930339	0.815262	AACACUG	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr5_+_82767284_82767310	0.735867	AACACUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr7_-_47621736_47621747	0.652087	AACACUG	ENST00000311160.9|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr22_-_29075853_29075853	0.582116	AACACUG	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr10_-_81205373_81205429	0.554885	AACACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr1_-_84464780_84464862	0.52929	AACACUG	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr11_-_2158507_2158535	0.484462	AACACUG	ENST00000381392.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000381395.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000418738.2|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr14_-_30396948_30396998	0.472197	AACACUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr6_+_72596604_72596727	0.470663	AACACUG	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr6_-_52441713_52441784	0.46809	AACACUG	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr12_-_131323719_131323746	0.430002	AACACUG	ENST00000392373.2|STX2|ENSG00000111450.9|syntaxin 2
hg19_v2_chr10_-_33623564_33623603	0.411624	AACACUG	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr3_-_112360116_112360153	0.404714	AACACUG	ENST00000206423.3|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80 	ENST00000439685.2|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr9_+_90112741_90112761	0.399569	AACACUG	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr14_-_61116168_61116180	0.396786	AACACUG	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr22_-_28197486_28197544	0.389103	AACACUG	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr5_-_172198190_172198206	0.377045	AACACUG	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr10_-_62704005_62704045	0.328958	AACACUG	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr11_-_105892937_105893130	0.32558	AACACUG	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr17_+_47074758_47074787	0.322697	AACACUG	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr1_-_232697304_232697304	0.313999	AACACUG	ENST00000366630.1|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr8_-_95908902_95908927	0.304128	AACACUG	ENST00000520509.1|CCNE2|ENSG00000175305.12|cyclin E2
hg19_v2_chr2_-_37899323_37899374	0.298355	AACACUG	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr17_+_68165657_68165688	0.294739	AACACUG	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr17_-_8534067_8534088	0.288642	AACACUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr8_+_55370487_55370503	0.286799	AACACUG	ENST00000297316.4|SOX17|ENSG00000164736.5|SRY (sex determining region Y)-box 17
hg19_v2_chr14_+_53019822_53019873	0.286132	AACACUG	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chrX_+_51928002_51928017	0.284767	AACACUG	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr2_-_214014959_214015058	0.269764	AACACUG	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr11_-_82782861_82782949	0.26311	AACACUG	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr8_-_13372395_13372429	0.254695	AACACUG	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr7_-_111846435_111846471	0.253107	AACACUG	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr11_-_118550375_118550407	0.247092	AACACUG	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr2_-_175499294_175499339	0.245236	AACACUG	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr16_+_53088885_53088961	0.239147	AACACUG	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr11_+_122526383_122526406	0.236018	AACACUG	ENST00000284273.5|UBASH3B|ENSG00000154127.5|ubiquitin associated and SH3 domain containing B
hg19_v2_chr12_+_60083118_60083157	0.235234	AACACUG	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr7_-_132261253_132261323	0.217054	AACACUG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chrX_-_13956737_13956808	0.21327	AACACUG	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr3_-_114790179_114790222	0.212353	AACACUG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr11_-_74109422_74109518	0.212346	AACACUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr5_+_118407053_118407239	0.210954	AACACUG	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr8_-_67525473_67525518	0.208773	AACACUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr18_-_65184217_65184217	0.204317	AACACUG	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr19_-_31840438_31840470	0.200067	AACACUG	ENST00000240587.4|TSHZ3|ENSG00000121297.6|teashirt zinc finger homeobox 3
hg19_v2_chr10_+_76586348_76586400	0.198812	AACACUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr3_+_62304712_62304732	0.194374	AACACUG	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr4_-_129208940_129208976	0.193582	AACACUG	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr5_-_146833485_146833522	0.188704	AACACUG	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr7_-_100287071_100287071	0.187326	AACACUG	ENST00000275732.5|GIGYF1|ENSG00000146830.9|GRB10 interacting GYF protein 1
hg19_v2_chr4_+_160188889_160188968	0.183729	AACACUG	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr2_+_46926048_46926095	0.182409	AACACUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr17_-_42908155_42908204	0.179282	AACACUG	ENST00000426548.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000590758.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000591424.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa
hg19_v2_chr12_-_42877764_42877803	0.17291	AACACUG	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr5_+_173315283_173315335	0.17239	AACACUG	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr14_-_90085458_90085557	0.170345	AACACUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr3_+_187930719_187930729	0.168471	AACACUG	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr2_-_167232484_167232503	0.164486	AACACUG	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr2_+_148778570_148778589	0.1607	AACACUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr13_+_93879085_93879136	0.160158	AACACUG	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr5_-_32444828_32444872	0.158468	AACACUG	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr9_+_4490394_4490446	0.158175	AACACUG	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr7_+_8008418_8008443	0.15807	AACACUG	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr3_+_132136331_132136378	0.157119	AACACUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr5_-_41510656_41510713	0.156133	AACACUG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr3_+_197687071_197687128	0.153421	AACACUG	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr1_+_211433275_211433335	0.147518	AACACUG	ENST00000367005.4|RCOR3|ENSG00000117625.9|REST corepressor 3
hg19_v2_chr17_-_49198216_49198236	0.142209	AACACUG	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr9_+_32384617_32384709	0.141991	AACACUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr1_+_118148556_118148681	0.141789	AACACUG	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr9_-_6015607_6015634	0.141158	AACACUG	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr4_-_85887503_85887544	0.139357	AACACUG	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr2_+_45878790_45878913	0.137047	AACACUG	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr14_+_52118576_52118673	0.136591	AACACUG	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr8_-_57123815_57123867	0.135411	AACACUG	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr16_+_31191431_31191472	0.134971	AACACUG	ENST00000254108.7|FUS|ENSG00000089280.14|fused in sarcoma 	ENST00000380244.3|FUS|ENSG00000089280.14|fused in sarcoma 	ENST00000568685.1|FUS|ENSG00000089280.14|fused in sarcoma
hg19_v2_chr2_-_218808771_218808851	0.131801	AACACUG	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr11_+_118307179_118307228	0.128944	AACACUG	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chrX_-_51812268_51812368	0.126919	AACACUG	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr16_-_71758602_71758604	0.126823	AACACUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr17_+_66508537_66508650	0.125316	AACACUG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr16_-_46865047_46865103	0.12506	AACACUG	ENST00000394806.2|C16orf87|ENSG00000155330.5|chromosome 16 open reading frame 87
hg19_v2_chr8_+_41435696_41435734	0.122564	AACACUG	ENST00000396987.3|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6 	ENST00000519853.1|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6
hg19_v2_chr12_-_96794143_96794264	0.119716	AACACUG	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr20_-_4982132_4982164	0.119552	AACACUG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr13_-_110438914_110438937	0.118698	AACACUG	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr3_+_152017181_152017229	0.117443	AACACUG	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr9_+_118916082_118916108	0.117215	AACACUG	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr15_-_52821247_52821295	0.115655	AACACUG	ENST00000399231.3|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin) 	ENST00000399233.2|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin)
hg19_v2_chr4_-_5894777_5894799	0.114188	AACACUG	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr10_+_70320413_70320413	0.113675	AACACUG	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chrX_+_153686614_153686629	0.113051	AACACUG	ENST00000369682.3|PLXNA3|ENSG00000130827.5|plexin A3
hg19_v2_chr1_+_218519577_218519594	0.112433	AACACUG	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr3_+_33318914_33318985	0.11136	AACACUG	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr5_+_169010638_169010799	0.111323	AACACUG	ENST00000265295.4|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000506574.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000515224.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000508247.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000513941.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr1_+_114472222_114472377	0.111288	AACACUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr17_+_26989109_26989248	0.110556	AACACUG	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr22_+_40573921_40573946	0.109344	AACACUG	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr1_+_93811438_93811548	0.108277	AACACUG	ENST00000370272.4|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2) 	ENST00000370267.1|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2)
hg19_v2_chr18_+_18943554_18943587	0.107983	AACACUG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr7_-_152133059_152133102	0.105093	AACACUG	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr7_-_105517021_105517050	0.103625	AACACUG	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr11_-_73309228_73309257	0.102525	AACACUG	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr3_+_160473996_160474033	0.102117	AACACUG	ENST00000498165.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr3_+_155588300_155588369	0.101389	AACACUG	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr6_+_10556215_10556240	0.100769	AACACUG	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr11_+_117049445_117049466	0.0996149	AACACUG	ENST00000324225.4|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2 	ENST00000532960.1|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2
hg19_v2_chr8_-_71316021_71316068	0.0992896	AACACUG	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr17_-_78450398_78450413	0.0985138	AACACUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr6_+_147525541_147525566	0.0979471	AACACUG	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr4_-_69215699_69215815	0.0974425	AACACUG	ENST00000510746.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000344157.4|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000355665.3|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr1_-_225840747_225840860	0.090634	AACACUG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr3_+_5020801_5020952	0.0904454	AACACUG	ENST00000256495.3|BHLHE40|ENSG00000134107.4|basic helix-loop-helix family, member e40
hg19_v2_chr7_-_156685890_156685924	0.0889099	AACACUG	ENST00000353442.5|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr12_+_12938541_12938600	0.0878235	AACACUG	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr3_-_136471204_136471249	0.0876202	AACACUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr16_-_30798492_30798535	0.0874484	AACACUG	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr1_+_84543734_84543775	0.0864008	AACACUG	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr10_+_60936347_60936358	0.086284	AACACUG	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chr11_+_32914579_32914724	0.0855293	AACACUG	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr6_-_122792919_122792970	0.0851033	AACACUG	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr3_+_39851094_39851151	0.0838225	AACACUG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr12_+_96588143_96588185	0.0816531	AACACUG	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr11_-_117186946_117186981	0.0813239	AACACUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr20_+_3776371_3776506	0.0809208	AACACUG	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr19_-_41196534_41196568	0.0798219	AACACUG	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr1_+_39456895_39456986	0.0792677	AACACUG	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr14_-_57735528_57735726	0.0785979	AACACUG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_-_11904152_11904166	0.0784459	AACACUG	ENST00000304623.8|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000458100.2|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr1_+_40723779_40723828	0.0782933	AACACUG	ENST00000372759.3|ZMPSTE24|ENSG00000084073.4|zinc metallopeptidase STE24
hg19_v2_chr13_-_77460525_77460548	0.0780507	AACACUG	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr4_+_113970772_113970885	0.0778033	AACACUG	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr15_-_61521495_61521518	0.0775802	AACACUG	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr15_+_62853562_62853614	0.0772095	AACACUG	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr10_+_116581503_116581570	0.0757798	AACACUG	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr13_+_42846272_42846334	0.075382	AACACUG	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr3_+_61547585_61547585	0.0752024	AACACUG	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr14_-_77495007_77495093	0.0746274	AACACUG	ENST00000238647.3|IRF2BPL|ENSG00000119669.3|interferon regulatory factor 2 binding protein-like
hg19_v2_chr2_+_178257372_178257523	0.0744171	AACACUG	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr20_+_46130601_46130613	0.0735734	AACACUG	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr21_+_34697209_34697245	0.07354	AACACUG	ENST00000270139.3|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chr10_+_63661053_63661079	0.0733166	AACACUG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr20_+_5107420_5107432	0.0716895	AACACUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr4_+_159690218_159690290	0.0701799	AACACUG	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr10_+_115803650_115803806	0.0684343	AACACUG	ENST00000369295.2|ADRB1|ENSG00000043591.4|adrenoceptor beta 1
hg19_v2_chr15_-_51058005_51058028	0.0680551	AACACUG	ENST00000261854.5|SPPL2A|ENSG00000138600.5|signal peptide peptidase like 2A
hg19_v2_chr3_+_152552685_152552736	0.0673413	AACACUG	ENST00000305097.3|P2RY1|ENSG00000169860.4|purinergic receptor P2Y, G-protein coupled, 1
hg19_v2_chr14_-_35182994_35183034	0.0671501	AACACUG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr5_-_95158375_95158485	0.066763	AACACUG	ENST00000512469.2|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000379979.4|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000505427.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000508780.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase)
hg19_v2_chr6_+_155054459_155054561	0.0665575	AACACUG	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr14_-_31676964_31677017	0.0665221	AACACUG	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr3_-_125313934_125313934	0.0650766	AACACUG	ENST00000296220.5|OSBPL11|ENSG00000144909.7|oxysterol binding protein-like 11
hg19_v2_chrX_+_49687216_49687265	0.0639134	AACACUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr3_-_55523966_55523979	0.0634421	AACACUG	ENST00000474267.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr6_+_64281906_64281922	0.0633131	AACACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr17_-_58603568_58603610	0.0630442	AACACUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr9_+_112542572_112542590	0.0620336	AACACUG	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr2_-_50574856_50574892	0.0609744	AACACUG	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr9_+_112810878_112810985	0.060845	AACACUG	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr1_-_211752073_211752084	0.0607298	AACACUG	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr10_-_65225722_65225755	0.0600871	AACACUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr2_-_161350305_161350391	0.0585344	AACACUG	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr13_-_30881621_30881675	0.0583791	AACACUG	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr5_+_172483347_172483407	0.0583505	AACACUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_-_132113036_132113061	0.0569588	AACACUG	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr5_-_43313574_43313614	0.0563237	AACACUG	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr5_+_177019159_177019213	0.0558901	AACACUG	ENST00000332598.6|TMED9|ENSG00000184840.7|transmembrane emp24 protein transport domain containing 9
hg19_v2_chr4_-_125633876_125633897	0.0557047	AACACUG	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr4_-_140098339_140098392	0.0549366	AACACUG	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr12_-_109125285_109125372	0.0547996	AACACUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr17_+_30677136_30677205	0.0547662	AACACUG	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr2_+_5832799_5832799	0.0546071	AACACUG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr10_+_14920843_14920921	0.0540216	AACACUG	ENST00000433779.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000378325.3|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000354919.6|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000313519.5|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000420416.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila)
hg19_v2_chr9_-_135819987_135820020	0.0539581	AACACUG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr17_-_4167142_4167281	0.0536951	AACACUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr18_+_29171689_29171847	0.0535861	AACACUG	ENST00000237014.3|TTR|ENSG00000118271.5|transthyretin
hg19_v2_chr3_+_141205852_141205929	0.0527751	AACACUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr7_+_99613195_99613206	0.0516865	AACACUG	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr15_-_37390482_37390572	0.0515208	AACACUG	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr10_+_65281123_65281183	0.0512422	AACACUG	ENST00000298249.4|REEP3|ENSG00000165476.8|receptor accessory protein 3 	ENST00000373758.4|REEP3|ENSG00000165476.8|receptor accessory protein 3
hg19_v2_chr1_+_25757376_25757411	0.0512243	AACACUG	ENST00000399766.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000399763.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000374343.4|TMEM57|ENSG00000204178.5|transmembrane protein 57
hg19_v2_chr17_-_74137374_74137385	0.051033	AACACUG	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr20_+_277737_277737	0.0508567	AACACUG	ENST00000382352.3|ZCCHC3|ENSG00000177764.6|zinc finger, CCHC domain containing 3
hg19_v2_chr5_-_132073210_132073330	0.0497271	AACACUG	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr3_-_56502375_56502428	0.0484936	AACACUG	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr5_-_56247935_56247959	0.0482957	AACACUG	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr2_-_100939195_100939195	0.0479564	AACACUG	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr11_+_86748863_86748948	0.0475535	AACACUG	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr1_+_236305826_236305877	0.0468516	AACACUG	ENST00000366592.3|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B 	ENST00000366591.4|GPR137B|ENSG00000077585.9|G protein-coupled receptor 137B
hg19_v2_chr15_+_57210818_57210930	0.0467884	AACACUG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr16_-_20911641_20911720	0.0463335	AACACUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr11_-_46638720_46638788	0.046226	AACACUG	ENST00000326737.3|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr19_-_46296011_46296061	0.0459829	AACACUG	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr12_-_46766577_46766650	0.0457852	AACACUG	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr1_-_243418344_243418356	0.0452165	AACACUG	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr5_-_24645078_24645096	0.0452083	AACACUG	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr1_-_205719295_205719404	0.0441299	AACACUG	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr21_+_35445827_35445886	0.0439649	AACACUG	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr17_-_38804061_38804112	0.0430079	AACACUG	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr2_-_2334888_2335053	0.0427401	AACACUG	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr17_+_28705921_28706000	0.0421432	AACACUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr5_-_142783175_142783297	0.0408886	AACACUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr12_+_22778009_22778112	0.0405792	AACACUG	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr1_-_28969517_28969605	0.0405483	AACACUG	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr12_+_68042495_68042508	0.0398448	AACACUG	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr17_-_74099795_74099875	0.0391076	AACACUG	ENST00000406660.3|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000335146.7|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000405575.4|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000589210.1|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000607838.1|EXOC7|ENSG00000182473.16|exocyst complex component 7
hg19_v2_chr4_-_100815525_100815647	0.0389547	AACACUG	ENST00000226522.8|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 	ENST00000499666.2|LAMTOR3|ENSG00000109270.8|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
hg19_v2_chr1_-_35658736_35658754	0.0389382	AACACUG	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr21_-_15755446_15755508	0.0388329	AACACUG	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr12_-_76478686_76478813	0.0383683	AACACUG	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr13_-_73356009_73356074	0.0382775	AACACUG	ENST00000377780.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae) 	ENST00000377767.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae)
hg19_v2_chr16_+_21610797_21610850	0.0380556	AACACUG	ENST00000358154.3|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr10_+_93558069_93558154	0.03716	AACACUG	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr13_+_53226963_53227023	0.0369322	AACACUG	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr3_-_72496035_72496069	0.0366688	AACACUG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr20_+_33814457_33814506	0.0365005	AACACUG	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr20_+_30555805_30555984	0.0360552	AACACUG	ENST00000562532.2|XKR7|ENSG00000260903.2|XK, Kell blood group complex subunit-related family, member 7
hg19_v2_chr3_+_171758344_171758358	0.0359651	AACACUG	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr6_+_170102210_170102275	0.0357866	AACACUG	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr2_+_179059365_179059376	0.0356889	AACACUG	ENST00000190611.4|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chr3_+_58318594_58318694	0.0356528	AACACUG	ENST00000356151.2|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000302779.5|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000383716.3|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000463280.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000383715.4|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000484288.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000479241.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase 	ENST00000536660.1|PXK|ENSG00000168297.11|PX domain containing serine/threonine kinase
hg19_v2_chr20_+_1099233_1099315	0.0355749	AACACUG	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chr20_+_43104508_43104540	0.0348345	AACACUG	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr10_-_61666267_61666414	0.0342317	AACACUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr10_-_64576105_64576133	0.033709	AACACUG	ENST00000242480.3|EGR2|ENSG00000122877.9|early growth response 2 	ENST00000411732.1|EGR2|ENSG00000122877.9|early growth response 2
hg19_v2_chr4_-_184580353_184580378	0.0336917	AACACUG	ENST00000326397.5|RWDD4|ENSG00000182552.10|RWD domain containing 4
hg19_v2_chr9_+_129622904_129622956	0.0336792	AACACUG	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr3_+_113465866_113465925	0.0332638	AACACUG	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr9_+_108210279_108210435	0.0328513	AACACUG	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr11_-_9025541_9025596	0.031865	AACACUG	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr3_+_85008089_85008189	0.0313396	AACACUG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr1_+_110162448_110162517	0.0308124	AACACUG	ENST00000342115.4|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000469039.2|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000474459.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000528667.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr17_+_4901199_4901291	0.0306396	AACACUG	ENST00000320785.5|KIF1C|ENSG00000129250.7|kinesin family member 1C 	ENST00000574165.1|KIF1C|ENSG00000129250.7|kinesin family member 1C
hg19_v2_chr3_-_21792838_21792927	0.0305605	AACACUG	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr1_+_100818009_100818072	0.0304428	AACACUG	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr13_-_31038370_31038509	0.0304255	AACACUG	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr1_+_168195229_168195294	0.0303235	AACACUG	ENST00000271375.4|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2 	ENST00000367825.3|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2
hg19_v2_chrX_+_21857717_21857763	0.0301746	AACACUG	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr10_+_112404132_112404155	0.02997	AACACUG	ENST00000369519.3|RBM20|ENSG00000203867.7|RNA binding motif protein 20
hg19_v2_chr22_+_31556134_31556263	0.0297632	AACACUG	ENST00000426256.2|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000326132.6|RNF185|ENSG00000138942.11|ring finger protein 185 	ENST00000266252.7|RNF185|ENSG00000138942.11|ring finger protein 185
hg19_v2_chr17_+_48796905_48797008	0.0294469	AACACUG	ENST00000505658.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000393227.2|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000240304.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000311571.3|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000505619.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000544170.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000510984.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr6_-_62996066_62996137	0.0286026	AACACUG	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr5_-_133561752_133561833	0.0285882	AACACUG	ENST00000519718.1|CTD-2410N18.5|ENSG00000272772.1|S-phase kinase-associated protein 1  	ENST00000481195.1|PPP2CA|ENSG00000113575.5|protein phosphatase 2, catalytic subunit, alpha isozyme
hg19_v2_chr8_-_95961578_95961639	0.028277	AACACUG	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr9_-_123476719_123476810	0.0281858	AACACUG	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr10_+_69644404_69644427	0.0279174	AACACUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr13_-_27334879_27334930	0.0274485	AACACUG	ENST00000405846.3|GPR12|ENSG00000132975.6|G protein-coupled receptor 12
hg19_v2_chr10_-_73848531_73848564	0.0272264	AACACUG	ENST00000373109.2|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chr2_+_68592305_68592405	0.0272065	AACACUG	ENST00000234313.7|PLEK|ENSG00000115956.9|pleckstrin
hg19_v2_chr3_-_113160334_113160457	0.0270198	AACACUG	ENST00000393845.2|WDR52|ENSG00000206530.4|WD repeat domain 52 	ENST00000295868.2|WDR52|ENSG00000206530.4|WD repeat domain 52
hg19_v2_chr4_-_76598296_76598318	0.0267466	AACACUG	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr2_-_37193606_37193633	0.026133	AACACUG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr2_+_71558858_71558936	0.0260091	AACACUG	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr10_+_111767720_111767752	0.0257276	AACACUG	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr6_+_167412665_167412698	0.0253675	AACACUG	ENST00000366847.4|FGFR1OP|ENSG00000213066.7|FGFR1 oncogene partner
hg19_v2_chr1_+_22379120_22379177	0.0253501	AACACUG	ENST00000400259.1|CDC42|ENSG00000070831.11|cell division cycle 42 	ENST00000344548.3|CDC42|ENSG00000070831.11|cell division cycle 42
hg19_v2_chr12_-_133338379_133338425	0.0252428	AACACUG	ENST00000539605.1|ANKLE2|ENSG00000176915.10|ankyrin repeat and LEM domain containing 2
hg19_v2_chr3_-_107809816_107809885	0.0249589	AACACUG	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr4_-_17783135_17783250	0.0249398	AACACUG	ENST00000265018.3|FAM184B|ENSG00000047662.4|family with sequence similarity 184, member B
hg19_v2_chr10_+_8096631_8096660	0.0242638	AACACUG	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr13_-_79177673_79177701	0.0241563	AACACUG	ENST00000377208.5|POU4F1|ENSG00000152192.6|POU class 4 homeobox 1
hg19_v2_chr1_+_24742264_24742312	0.024069	AACACUG	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr4_-_42659102_42659161	0.0237821	AACACUG	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr2_+_113403434_113403496	0.0237197	AACACUG	ENST00000272542.3|SLC20A1|ENSG00000144136.6|solute carrier family 20 (phosphate transporter), member 1
hg19_v2_chr16_+_19125252_19125267	0.0236667	AACACUG	ENST00000566735.1|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2 	ENST00000381440.3|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2
hg19_v2_chr19_-_10614386_10614417	0.0236655	AACACUG	ENST00000171111.5|KEAP1|ENSG00000079999.9|kelch-like ECH-associated protein 1
hg19_v2_chr2_+_10861775_10861786	0.0236129	AACACUG	ENST00000272238.4|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 	ENST00000381661.3|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg19_v2_chr1_-_171711387_171711420	0.0233164	AACACUG	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr17_+_40118759_40118772	0.0228364	AACACUG	ENST00000393892.3|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr9_+_130374537_130374568	0.0228262	AACACUG	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr13_+_33160553_33160564	0.0228223	AACACUG	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr2_+_150187020_150187120	0.0228118	AACACUG	ENST00000334166.4|LYPD6|ENSG00000187123.10|LY6/PLAUR domain containing 6
hg19_v2_chr11_+_36589547_36589575	0.0227058	AACACUG	ENST00000299440.5|RAG1|ENSG00000166349.5|recombination activating gene 1
hg19_v2_chr16_-_69368774_69368774	0.0226337	AACACUG	ENST00000562949.1|RP11-343C2.12|ENSG00000272617.1|Conserved oligomeric Golgi complex subunit 8
hg19_v2_chr2_+_138721850_138721890	0.0222832	AACACUG	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr9_+_72873837_72873937	0.0221365	AACACUG	ENST00000361138.5|SMC5|ENSG00000198887.7|structural maintenance of chromosomes 5
hg19_v2_chr21_-_44846999_44847017	0.0220584	AACACUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr12_-_122018859_122018941	0.0212061	AACACUG	ENST00000536437.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000377071.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000538046.2|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr22_+_39966758_39966758	0.0211345	AACACUG	ENST00000407673.1|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit 	ENST00000401624.1|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit 	ENST00000404898.1|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit 	ENST00000402142.3|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit 	ENST00000336649.4|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit 	ENST00000400164.3|CACNA1I|ENSG00000100346.13|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg19_v2_chr12_+_49761224_49761259	0.0207526	AACACUG	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr16_-_69364467_69364516	0.0206222	AACACUG	ENST00000288022.1|PDF|ENSG00000258429.1|peptide deformylase (mitochondrial)
hg19_v2_chr17_+_57642886_57643006	0.0205873	AACACUG	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr1_+_50574585_50574638	0.0205601	AACACUG	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr10_-_121356007_121356147	0.0204118	AACACUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr1_-_57889687_57889754	0.0202774	AACACUG	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr14_+_36295504_36295580	0.0201165	AACACUG	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr14_+_60558627_60558738	0.020088	AACACUG	ENST00000317623.4|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000391611.2|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406854.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406949.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila)
hg19_v2_chr7_-_27224795_27224840	0.0194974	AACACUG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr12_+_94542459_94542513	0.0194966	AACACUG	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr13_-_50367057_50367142	0.0186254	AACACUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr17_-_41856305_41856363	0.0185615	AACACUG	ENST00000397937.2|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3 	ENST00000226004.3|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3
hg19_v2_chr4_+_48343339_48343414	0.0184959	AACACUG	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr17_-_17875688_17875736	0.0184243	AACACUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr5_+_179125907_179126038	0.0183321	AACACUG	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr2_-_139537918_139537946	0.0181853	AACACUG	ENST00000272641.3|NXPH2|ENSG00000144227.4|neurexophilin 2
hg19_v2_chr1_-_91487013_91487070	0.0180611	AACACUG	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr1_+_87380299_87380475	0.0176858	AACACUG	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr20_-_10654639_10654694	0.0174893	AACACUG	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr5_-_145214848_145214886	0.0172641	AACACUG	ENST00000505416.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000334744.4|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000358004.2|PRELID2|ENSG00000186314.7|PRELI domain containing 2 	ENST00000511435.1|PRELID2|ENSG00000186314.7|PRELI domain containing 2
hg19_v2_chr6_-_46138676_46138726	0.0171327	AACACUG	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr17_-_58042075_58042135	0.0168231	AACACUG	ENST00000305783.8|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000589113.1|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000442346.2|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1
hg19_v2_chr20_+_47538357_47538427	0.0166158	AACACUG	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr17_-_46178527_46178566	0.0164925	AACACUG	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr3_+_11314099_11314122	0.0164763	AACACUG	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr10_+_89622870_89622870	0.0164713	AACACUG	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr7_-_99774945_99775026	0.0164707	AACACUG	ENST00000292377.2|GPC2|ENSG00000213420.3|glypican 2
hg19_v2_chr19_+_7459998_7460046	0.0162351	AACACUG	ENST00000319670.9|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18 	ENST00000599752.1|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v2_chr11_+_45825896_45825965	0.0158253	AACACUG	ENST00000314134.3|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr14_+_61201445_61201530	0.0157305	AACACUG	ENST00000261245.4|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1 	ENST00000539616.2|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1
hg19_v2_chr5_+_174905398_174905507	0.0153966	AACACUG	ENST00000321442.5|SFXN1|ENSG00000164466.8|sideroflexin 1
hg19_v2_chrX_+_78426469_78426469	0.014721	AACACUG	ENST00000276077.1|GPR174|ENSG00000147138.1|G protein-coupled receptor 174
hg19_v2_chr3_-_88108192_88108203	0.0138371	AACACUG	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr9_-_101984184_101984238	0.0136907	AACACUG	ENST00000476832.1|ALG2|ENSG00000119523.8|ALG2, alpha-1,3/1,6-mannosyltransferase
hg19_v2_chr7_+_88388628_88388682	0.0136795	AACACUG	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr1_-_212004090_212004168	0.0133072	AACACUG	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr12_+_14518598_14518663	0.0131291	AACACUG	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr11_-_86666427_86666450	0.0125453	AACACUG	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr15_+_41523335_41523350	0.012492	AACACUG	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr1_+_61547894_61547980	0.0124023	AACACUG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chrX_-_137793826_137793893	0.0121858	AACACUG	ENST00000315930.6|FGF13|ENSG00000129682.9|fibroblast growth factor 13
hg19_v2_chr17_-_27621125_27621143	0.0121767	AACACUG	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr7_+_128379346_128379447	0.0121495	AACACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr17_-_62502639_62502849	0.0121108	AACACUG	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr1_-_24306798_24306828	0.0120773	AACACUG	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr5_+_112312416_112312440	0.0117892	AACACUG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr20_-_62462566_62462631	0.0116611	AACACUG	ENST00000245663.4|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46 	ENST00000302995.2|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46
hg19_v2_chr19_+_50432400_50432479	0.0114043	AACACUG	ENST00000423777.2|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000600336.1|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000597227.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr9_-_36400213_36400296	0.0112599	AACACUG	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr6_-_30524951_30524957	0.0103038	AACACUG	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr4_-_186125077_186125182	0.010145	AACACUG	ENST00000458385.2|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000514798.1|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000296775.6|KIAA1430|ENSG00000164323.8|KIAA1430
hg19_v2_chrX_-_131352152_131352204	0.00984292	AACACUG	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr2_-_54087066_54087297	0.0097729	AACACUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr20_+_3451650_3451729	0.00931927	AACACUG	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chrX_+_70752917_70752933	0.00919318	AACACUG	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr4_+_128886532_128886576	0.00910901	AACACUG	ENST00000444616.1|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29 	ENST00000388795.5|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29
hg19_v2_chr1_-_150208291_150208309	0.00903799	AACACUG	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr3_-_52931557_52931623	0.00890635	AACACUG	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr11_-_67888671_67888774	0.00858839	AACACUG	ENST00000265689.4|CHKA|ENSG00000110721.7|choline kinase alpha
hg19_v2_chr12_-_56727487_56727533	0.00848189	AACACUG	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr21_+_38071430_38071456	0.00834434	AACACUG	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr3_-_142682178_142682178	0.00816095	AACACUG	ENST00000340634.3|PAQR9|ENSG00000188582.4|progestin and adipoQ receptor family member IX
hg19_v2_chr5_-_146258205_146258230	0.00803641	AACACUG	ENST00000394413.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr11_+_13299186_13299432	0.00786666	AACACUG	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr17_+_46985731_46985777	0.00782885	AACACUG	ENST00000360943.5|UBE2Z|ENSG00000159202.13|ubiquitin-conjugating enzyme E2Z
hg19_v2_chr6_+_134210243_134210276	0.00760452	AACACUG	ENST00000367882.4|TCF21|ENSG00000118526.6|transcription factor 21
hg19_v2_chr11_+_842808_842881	0.00754152	AACACUG	ENST00000397397.2|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000397411.2|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000397396.1|TSPAN4|ENSG00000214063.6|tetraspanin 4
hg19_v2_chr18_+_43304092_43304121	0.00741784	AACACUG	ENST00000321925.4|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 	ENST00000587601.1|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v2_chr7_+_35840542_35840671	0.00738008	AACACUG	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr6_+_163835669_163835693	0.00720722	AACACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_-_168006591_168006638	0.0069578	AACACUG	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chrX_-_122866874_122866911	0.00693601	AACACUG	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr2_+_160568978_160569064	0.00683053	AACACUG	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr5_+_177631497_177631508	0.00646098	AACACUG	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr15_-_85259330_85259352	0.00635217	AACACUG	ENST00000560266.1|SEC11A|ENSG00000140612.9|SEC11 homolog A (S. cerevisiae)
hg19_v2_chr4_-_42154895_42154895	0.0055788	AACACUG	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr2_-_24149977_24150007	0.00493964	AACACUG	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr5_+_10353780_10353890	0.0048763	AACACUG	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr2_+_198669365_198669426	0.00485674	AACACUG	ENST00000428675.1|PLCL1|ENSG00000115896.11|phospholipase C-like 1
hg19_v2_chr6_+_99282570_99282591	0.00468517	AACACUG	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr17_+_49230897_49231026	0.00454631	AACACUG	ENST00000393196.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393198.3|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000336097.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000480143.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000511355.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393193.2|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000376392.6|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000608447.1|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000555572.1|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000013034.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1
hg19_v2_chr1_-_67519782_67519810	0.00422979	AACACUG	ENST00000235345.5|SLC35D1|ENSG00000116704.6|solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
hg19_v2_chr10_-_88281494_88281572	0.00422892	AACACUG	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr1_+_93913713_93913839	0.00404146	AACACUG	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr4_+_119809984_119810024	0.00377498	AACACUG	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr7_+_129710350_129710434	0.00377178	AACACUG	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr17_-_37557846_37557920	0.00322839	AACACUG	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr18_-_21977748_21977823	0.00316101	AACACUG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr12_-_54673871_54673925	0.00308416	AACACUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr1_+_33283043_33283198	0.00219047	AACACUG	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chrX_+_118370211_118370222	0.00207431	AACACUG	ENST00000217971.7|PGRMC1|ENSG00000101856.8|progesterone receptor membrane component 1
hg19_v2_chrX_-_119694538_119694555	0.00187384	AACACUG	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr5_+_56205081_56205092	0.0018471	AACACUG	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr17_+_72427477_72427667	0.0014874	AACACUG	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr11_+_119076745_119076792	0.00122164	AACACUG	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr11_+_33563821_33563877	0.00098335	AACACUG	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr3_+_19988566_19988648	0.000762602	AACACUG	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr5_+_138629417_138629467	0.000710144	AACACUG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr20_+_57226284_57226345	0.000601549	AACACUG	ENST00000458280.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000355957.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000361770.5|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000312283.8|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000412911.1|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000359617.4|STX16|ENSG00000124222.17|syntaxin 16 	ENST00000371141.4|STX16|ENSG00000124222.17|syntaxin 16
hg19_v2_chr6_+_107811162_107811196	0.00054014	AACACUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr22_+_38054721_38054737	0.000217446	AACACUG	ENST00000215904.6|PDXP|ENSG00000241360.1|pyridoxal (pyridoxine, vitamin B6) phosphatase
