hg19_v2_chr6_-_46293378_46293415	0.313748	AGCCCUU	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chr6_+_72596604_72596727	0.249862	AGCCCUU	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr4_-_39640700_39640712	0.199184	AGCCCUU	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr20_-_48099182_48099214	0.198642	AGCCCUU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr5_+_148521046_148521076	0.189483	AGCCCUU	ENST00000326685.7|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3 	ENST00000356541.3|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3 	ENST00000309868.7|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr3_-_114790179_114790222	0.186954	AGCCCUU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr11_-_1771797_1771832	0.164604	AGCCCUU	ENST00000340134.4|IFITM10|ENSG00000244242.1|interferon induced transmembrane protein 10
hg19_v2_chr21_-_39288743_39288765	0.160064	AGCCCUU	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr5_-_136834982_136835037	0.138458	AGCCCUU	ENST00000510689.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 	ENST00000394945.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v2_chr12_-_81331697_81331733	0.110621	AGCCCUU	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr8_-_91658303_91658327	0.106327	AGCCCUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr10_-_62704005_62704045	0.104909	AGCCCUU	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr2_-_180129484_180129574	0.104846	AGCCCUU	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr5_-_137368708_137368721	0.104517	AGCCCUU	ENST00000033079.3|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr14_+_53019822_53019873	0.101087	AGCCCUU	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr17_+_58677539_58677610	0.0950222	AGCCCUU	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr15_-_83316254_83316368	0.0928083	AGCCCUU	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr20_+_34894247_34894279	0.0900466	AGCCCUU	ENST00000373913.3|DLGAP4|ENSG00000080845.13|discs, large (Drosophila) homolog-associated protein 4
hg19_v2_chr10_+_72972281_72972336	0.0887552	AGCCCUU	ENST00000335350.6|UNC5B|ENSG00000107731.8|unc-5 homolog B (C. elegans)
hg19_v2_chr15_-_48470558_48470714	0.0835288	AGCCCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chrX_-_13956737_13956808	0.0834111	AGCCCUU	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr2_-_122407097_122407163	0.0817977	AGCCCUU	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr5_+_118407053_118407239	0.0808512	AGCCCUU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr9_-_86153218_86153461	0.0796407	AGCCCUU	ENST00000304195.3|FRMD3|ENSG00000172159.11|FERM domain containing 3 	ENST00000376438.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr20_+_33292068_33292164	0.077392	AGCCCUU	ENST00000374810.3|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000374809.2|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000451665.1|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2
hg19_v2_chr17_-_53800217_53800231	0.0742922	AGCCCUU	ENST00000424486.2|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr18_-_65184217_65184217	0.0668393	AGCCCUU	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr12_+_94542459_94542513	0.0664458	AGCCCUU	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr19_-_41196534_41196568	0.0629743	AGCCCUU	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr3_-_141868357_141868393	0.0616043	AGCCCUU	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr1_+_178062855_178062903	0.0573995	AGCCCUU	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr11_-_105892937_105893130	0.0573272	AGCCCUU	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr15_+_60296421_60296464	0.0571405	AGCCCUU	ENST00000396057.4|FOXB1|ENSG00000171956.5|forkhead box B1
hg19_v2_chr5_-_114880533_114880591	0.0567502	AGCCCUU	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr10_+_60272814_60272900	0.0564849	AGCCCUU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr12_-_4758159_4758232	0.0543532	AGCCCUU	ENST00000545990.2|AKAP3|ENSG00000111254.3|A kinase (PRKA) anchor protein 3
hg19_v2_chr11_+_120195992_120196023	0.0529405	AGCCCUU	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr8_-_116681221_116681236	0.0517915	AGCCCUU	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr10_-_33623564_33623603	0.0487603	AGCCCUU	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr12_+_56367697_56367893	0.0484731	AGCCCUU	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr14_+_45366472_45366514	0.0474097	AGCCCUU	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr11_-_22851367_22851411	0.0472281	AGCCCUU	ENST00000354193.4|SVIP|ENSG00000198168.4|small VCP/p97-interacting protein
hg19_v2_chr5_-_38595498_38595514	0.0471711	AGCCCUU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr6_+_45389893_45389914	0.0446899	AGCCCUU	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr14_-_34420259_34420291	0.0433224	AGCCCUU	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr17_+_47074758_47074787	0.042617	AGCCCUU	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr16_+_66878814_66878843	0.0420011	AGCCCUU	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr6_+_170102210_170102275	0.0416722	AGCCCUU	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr16_+_28303804_28303864	0.0397117	AGCCCUU	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr16_+_69599861_69599887	0.0397013	AGCCCUU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr8_+_26240414_26240631	0.0377196	AGCCCUU	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr16_-_20911641_20911720	0.0375215	AGCCCUU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chrX_+_110339439_110339605	0.0357073	AGCCCUU	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr12_+_56511943_56512191	0.0354463	AGCCCUU	ENST00000257940.2|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551790.1|ESYT1|ENSG00000139641.8|extended synaptotagmin-like protein 1 	ENST00000552345.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551880.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000546903.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10
hg19_v2_chr13_-_49107303_49107369	0.0348817	AGCCCUU	ENST00000344532.3|RCBTB2|ENSG00000136161.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
hg19_v2_chr15_-_68724490_68724516	0.0348313	AGCCCUU	ENST00000315757.7|ITGA11|ENSG00000137809.12|integrin, alpha 11 	ENST00000423218.2|ITGA11|ENSG00000137809.12|integrin, alpha 11
hg19_v2_chr2_-_37899323_37899374	0.0347205	AGCCCUU	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr16_+_85646763_85646822	0.0342562	AGCCCUU	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr9_-_21335356_21335411	0.0334329	AGCCCUU	ENST00000359039.4|KLHL9|ENSG00000198642.5|kelch-like family member 9
hg19_v2_chr8_+_104152922_104152992	0.0333597	AGCCCUU	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr5_+_40679584_40679600	0.0332473	AGCCCUU	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr14_+_59104741_59104897	0.0329687	AGCCCUU	ENST00000395153.3|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1 	ENST00000335867.4|DACT1|ENSG00000165617.10|dishevelled-binding antagonist of beta-catenin 1
hg19_v2_chr15_+_63569731_63569783	0.0328973	AGCCCUU	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr1_+_205012293_205012326	0.0313603	AGCCCUU	ENST00000331830.4|CNTN2|ENSG00000184144.5|contactin 2 (axonal)
hg19_v2_chr2_+_45878790_45878913	0.0298441	AGCCCUU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr9_+_129622904_129622956	0.0296622	AGCCCUU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr3_+_179370517_179370543	0.0291785	AGCCCUU	ENST00000263966.3|USP13|ENSG00000058056.4|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg19_v2_chr2_+_242577027_242577074	0.0288678	AGCCCUU	ENST00000402096.1|ATG4B|ENSG00000168397.12|autophagy related 4B, cysteine peptidase 	ENST00000404914.3|ATG4B|ENSG00000168397.12|autophagy related 4B, cysteine peptidase
hg19_v2_chr12_+_69864129_69864222	0.0286522	AGCCCUU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr9_-_73736511_73736546	0.0279319	AGCCCUU	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr12_+_121837844_121837892	0.0278378	AGCCCUU	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr4_-_170533723_170533789	0.0268988	AGCCCUU	ENST00000510533.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000439128.2|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000511633.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000512193.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000507142.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1
hg19_v2_chr17_+_4487294_4487307	0.025529	AGCCCUU	ENST00000338859.4|SMTNL2|ENSG00000188176.7|smoothelin-like 2
hg19_v2_chr2_+_24714729_24714927	0.0252785	AGCCCUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr5_+_161274685_161274747	0.0248619	AGCCCUU	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr4_+_6784401_6784510	0.0247706	AGCCCUU	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr15_-_50978965_50979012	0.0240241	AGCCCUU	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr5_-_107006596_107006651	0.0233103	AGCCCUU	ENST00000333274.6|EFNA5|ENSG00000184349.8|ephrin-A5
hg19_v2_chr13_+_98086445_98086493	0.0227477	AGCCCUU	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr16_+_28875126_28875195	0.0226633	AGCCCUU	ENST00000359285.5|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1 	ENST00000538342.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr20_-_3767324_3767443	0.0224592	AGCCCUU	ENST00000379751.4|CENPB|ENSG00000125817.7|centromere protein B, 80kDa
hg19_v2_chr11_+_111807863_111807937	0.0222696	AGCCCUU	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr3_+_29322803_29322850	0.0221227	AGCCCUU	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr2_+_178257372_178257523	0.0216609	AGCCCUU	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr1_-_205719295_205719404	0.0216373	AGCCCUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr9_-_19786926_19786926	0.0214656	AGCCCUU	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr5_-_142783175_142783297	0.0213194	AGCCCUU	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr6_-_146135880_146135952	0.0212783	AGCCCUU	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr7_-_132261253_132261323	0.0211048	AGCCCUU	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr1_-_108507631_108507809	0.0210896	AGCCCUU	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr15_+_67358163_67358192	0.021049	AGCCCUU	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr5_+_139493665_139493718	0.0210449	AGCCCUU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr4_-_78740511_78740544	0.0209746	AGCCCUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr6_+_21593972_21594071	0.0209223	AGCCCUU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr12_+_48166978_48167047	0.0209202	AGCCCUU	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr8_+_126442563_126442624	0.0207935	AGCCCUU	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr10_-_115904361_115904375	0.0202816	AGCCCUU	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr2_+_187558698_187558795	0.0197627	AGCCCUU	ENST00000304698.5|FAM171B|ENSG00000144369.8|family with sequence similarity 171, member B
hg19_v2_chr18_+_9136758_9136852	0.0196823	AGCCCUU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr1_+_93913713_93913839	0.0193654	AGCCCUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr9_-_72374848_72374894	0.0190746	AGCCCUU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr9_+_34990219_34990312	0.0186521	AGCCCUU	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr4_-_170192185_170192256	0.0186358	AGCCCUU	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chr3_+_141106643_141106681	0.0186242	AGCCCUU	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr12_-_65146636_65146651	0.018475	AGCCCUU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr14_-_76127519_76127543	0.018088	AGCCCUU	ENST00000256319.6|C14orf1|ENSG00000133935.6|chromosome 14 open reading frame 1
hg19_v2_chr1_-_27816556_27816572	0.0179547	AGCCCUU	ENST00000536657.1|WASF2|ENSG00000158195.6|WAS protein family, member 2
hg19_v2_chr13_+_51796497_51796517	0.0178148	AGCCCUU	ENST00000322475.8|FAM124A|ENSG00000150510.11|family with sequence similarity 124A 	ENST00000280057.6|FAM124A|ENSG00000150510.11|family with sequence similarity 124A
hg19_v2_chr15_-_75744014_75744087	0.0171868	AGCCCUU	ENST00000394947.3|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000565264.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr3_-_185826855_185826911	0.0171647	AGCCCUU	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chr11_-_64612041_64612116	0.0171162	AGCCCUU	ENST00000342711.5|CDC42BPG|ENSG00000171219.8|CDC42 binding protein kinase gamma (DMPK-like)
hg19_v2_chr1_+_51701924_51702001	0.0170429	AGCCCUU	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr17_+_55333876_55333939	0.0169193	AGCCCUU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr11_+_61520075_61520136	0.0164331	AGCCCUU	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr7_-_6388537_6388611	0.0163208	AGCCCUU	ENST00000313324.4|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A 	ENST00000530143.1|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A
hg19_v2_chr6_-_99873145_99873207	0.0160994	AGCCCUU	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr8_-_139509065_139509113	0.0158607	AGCCCUU	ENST00000395297.1|FAM135B|ENSG00000147724.7|family with sequence similarity 135, member B
hg19_v2_chr1_+_61547894_61547980	0.0157272	AGCCCUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_+_206557366_206557368	0.0155922	AGCCCUU	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr12_-_48499591_48499663	0.01548	AGCCCUU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr16_-_4292071_4292088	0.0153957	AGCCCUU	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr2_+_113239710_113239753	0.0153711	AGCCCUU	ENST00000233336.6|TTL|ENSG00000114999.7|tubulin tyrosine ligase
hg19_v2_chr9_-_74383799_74383818	0.015365	AGCCCUU	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr20_+_30555805_30555984	0.0153135	AGCCCUU	ENST00000562532.2|XKR7|ENSG00000260903.2|XK, Kell blood group complex subunit-related family, member 7
hg19_v2_chr6_+_147525541_147525566	0.0151481	AGCCCUU	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr8_-_82024290_82024310	0.0150572	AGCCCUU	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr13_-_23949671_23949702	0.0148084	AGCCCUU	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr1_-_51425902_51425976	0.0146517	AGCCCUU	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr11_-_117186946_117186981	0.0141054	AGCCCUU	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr16_-_30134524_30134630	0.0140908	AGCCCUU	ENST00000395202.1|MAPK3|ENSG00000102882.7|mitogen-activated protein kinase 3 	ENST00000395199.3|MAPK3|ENSG00000102882.7|mitogen-activated protein kinase 3 	ENST00000263025.4|MAPK3|ENSG00000102882.7|mitogen-activated protein kinase 3 	ENST00000322266.5|MAPK3|ENSG00000102882.7|mitogen-activated protein kinase 3 	ENST00000403394.1|MAPK3|ENSG00000102882.7|mitogen-activated protein kinase 3
hg19_v2_chr20_-_48532019_48532045	0.014054	AGCCCUU	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr14_-_35099315_35099369	0.0127932	AGCCCUU	ENST00000396526.3|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000396534.3|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000355110.5|SNX6|ENSG00000129515.14|sorting nexin 6 	ENST00000557265.1|SNX6|ENSG00000129515.14|sorting nexin 6
hg19_v2_chr2_-_47168906_47168994	0.0124243	AGCCCUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr12_-_56583332_56583369	0.0120496	AGCCCUU	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr9_-_127952032_127952098	0.011881	AGCCCUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr2_+_208394616_208394655	0.0116061	AGCCCUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr15_+_50716576_50716624	0.0111989	AGCCCUU	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr13_-_40177261_40177339	0.0109983	AGCCCUU	ENST00000379589.3|LHFP|ENSG00000183722.7|lipoma HMGIC fusion partner
hg19_v2_chr15_+_79724858_79724858	0.0109272	AGCCCUU	ENST00000305428.3|KIAA1024|ENSG00000169330.4|KIAA1024
hg19_v2_chr10_+_114206956_114207040	0.0109206	AGCCCUU	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr2_-_86564776_86564813	0.0106731	AGCCCUU	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr10_+_70661014_70661090	0.0106033	AGCCCUU	ENST00000373585.3|DDX50|ENSG00000107625.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
hg19_v2_chr22_+_41697520_41697613	0.0103342	AGCCCUU	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr15_+_44580899_44580947	0.0102517	AGCCCUU	ENST00000559222.1|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4 	ENST00000299957.6|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4
hg19_v2_chr1_+_161087873_161087925	0.00989831	AGCCCUU	ENST00000368009.2|NIT1|ENSG00000158793.9|nitrilase 1 	ENST00000368007.4|NIT1|ENSG00000158793.9|nitrilase 1 	ENST00000368008.1|NIT1|ENSG00000158793.9|nitrilase 1 	ENST00000392190.5|NIT1|ENSG00000158793.9|nitrilase 1
hg19_v2_chr5_+_80256453_80256506	0.00969663	AGCCCUU	ENST00000265080.4|RASGRF2|ENSG00000113319.7|Ras protein-specific guanine nucleotide-releasing factor 2
hg19_v2_chr12_-_14133053_14133159	0.00968538	AGCCCUU	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr9_+_129089088_129089163	0.00939326	AGCCCUU	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr14_+_64932210_64932226	0.00889941	AGCCCUU	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr22_-_31688431_31688520	0.00869505	AGCCCUU	ENST00000402249.3|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000443175.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000215912.5|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000441972.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr20_+_43595115_43595220	0.00854808	AGCCCUU	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr19_+_18747775_18747844	0.00819099	AGCCCUU	ENST00000300976.4|KLHL26|ENSG00000167487.7|kelch-like family member 26 	ENST00000595182.1|KLHL26|ENSG00000167487.7|kelch-like family member 26 	ENST00000599006.1|KLHL26|ENSG00000167487.7|kelch-like family member 26
hg19_v2_chr3_-_69101413_69101457	0.00818537	AGCCCUU	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr16_-_57513657_57513826	0.00811093	AGCCCUU	ENST00000566936.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000568617.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000567276.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000569548.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000569250.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000564378.1|DOK4|ENSG00000125170.6|docking protein 4
hg19_v2_chr17_+_75136980_75137028	0.00792769	AGCCCUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr12_+_74931551_74931656	0.00781729	AGCCCUU	ENST00000519948.2|ATXN7L3B|ENSG00000253719.2|ataxin 7-like 3B
hg19_v2_chr16_-_17564738_17564834	0.0075583	AGCCCUU	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr4_-_76439596_76439643	0.00743421	AGCCCUU	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr5_+_76145920_76145948	0.00740928	AGCCCUU	ENST00000317593.4|S100Z|ENSG00000171643.9|S100 calcium binding protein Z
hg19_v2_chr16_-_15736953_15737025	0.007243	AGCCCUU	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr1_+_173684047_173684136	0.00720027	AGCCCUU	ENST00000546011.1|KLHL20|ENSG00000076321.6|kelch-like family member 20 	ENST00000209884.4|KLHL20|ENSG00000076321.6|kelch-like family member 20
hg19_v2_chr20_+_43374421_43374436	0.00699476	AGCCCUU	ENST00000372861.3|KCNK15|ENSG00000124249.5|potassium channel, subfamily K, member 15
hg19_v2_chr17_-_63052929_63052962	0.00682611	AGCCCUU	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr12_+_122242597_122242638	0.00674484	AGCCCUU	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr18_+_46065393_46065444	0.00671461	AGCCCUU	ENST00000256413.3|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr11_+_118307179_118307228	0.00648597	AGCCCUU	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr2_-_54087066_54087297	0.00635334	AGCCCUU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr1_+_246729724_246729794	0.00577536	AGCCCUU	ENST00000366513.4|CNST|ENSG00000162852.9|consortin, connexin sorting protein 	ENST00000366512.3|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr5_+_133451254_133451316	0.00571523	AGCCCUU	ENST00000517851.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000521639.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000522375.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000378560.4|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000432532.2|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000520958.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000518915.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000395023.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box)
hg19_v2_chr17_+_46125707_46125746	0.00555147	AGCCCUU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr5_+_179921430_179921461	0.00536563	AGCCCUU	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr4_+_3768075_3768125	0.00528265	AGCCCUU	ENST00000509482.1|ADRA2C|ENSG00000184160.6|adrenoceptor alpha 2C 	ENST00000330055.5|ADRA2C|ENSG00000184160.6|adrenoceptor alpha 2C
hg19_v2_chr6_+_126277842_126277993	0.00523418	AGCCCUU	ENST00000229633.5|HINT3|ENSG00000111911.5|histidine triad nucleotide binding protein 3
hg19_v2_chr4_-_68620053_68620112	0.00505954	AGCCCUU	ENST00000420975.2|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor 	ENST00000226413.4|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor
hg19_v2_chr5_+_65222299_65222361	0.00490018	AGCCCUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr6_+_56954867_56954882	0.00427388	AGCCCUU	ENST00000370708.4|ZNF451|ENSG00000112200.12|zinc finger protein 451 	ENST00000370702.1|ZNF451|ENSG00000112200.12|zinc finger protein 451
hg19_v2_chr17_+_30677136_30677205	0.00416918	AGCCCUU	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr1_-_165738085_165738139	0.00407053	AGCCCUU	ENST00000464650.1|TMCO1|ENSG00000143183.12|transmembrane and coiled-coil domains 1 	ENST00000392129.6|TMCO1|ENSG00000143183.12|transmembrane and coiled-coil domains 1
hg19_v2_chr3_-_125094093_125094198	0.00400941	AGCCCUU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr19_+_54466179_54466294	0.00396795	AGCCCUU	ENST00000270458.2|CACNG8|ENSG00000142408.2|calcium channel, voltage-dependent, gamma subunit 8
hg19_v2_chr4_-_116034979_116035046	0.00376092	AGCCCUU	ENST00000264363.2|NDST4|ENSG00000138653.5|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg19_v2_chr12_+_52404270_52404311	0.00375563	AGCCCUU	ENST00000552049.1|GRASP|ENSG00000161835.6|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein 	ENST00000546756.1|GRASP|ENSG00000161835.6|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein
hg19_v2_chr16_+_19535133_19535231	0.00343382	AGCCCUU	ENST00000396212.2|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa 	ENST00000381396.5|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa
hg19_v2_chr21_+_17102311_17102496	0.0033739	AGCCCUU	ENST00000285679.6|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000351097.5|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000285681.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000400183.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25
hg19_v2_chr22_-_39268308_39268319	0.00335982	AGCCCUU	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr16_-_2246436_2246526	0.00324173	AGCCCUU	ENST00000343516.6|CASKIN1|ENSG00000167971.14|CASK interacting protein 1
hg19_v2_chr20_+_60718785_60718853	0.00213977	AGCCCUU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr1_-_23495340_23495357	0.00205591	AGCCCUU	ENST00000418342.1|LUZP1|ENSG00000169641.9|leucine zipper protein 1
hg19_v2_chr7_+_44240520_44240652	0.00197258	AGCCCUU	ENST00000496112.1|YKT6|ENSG00000106636.3|YKT6 v-SNARE homolog (S. cerevisiae) 	ENST00000223369.2|YKT6|ENSG00000106636.3|YKT6 v-SNARE homolog (S. cerevisiae)
hg19_v2_chr16_+_28962128_28962335	0.00196646	AGCCCUU	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr2_+_73144604_73144654	0.00191513	AGCCCUU	ENST00000258106.6|EMX1|ENSG00000135638.9|empty spiracles homeobox 1
hg19_v2_chr15_+_44719394_44719579	0.00188527	AGCCCUU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr17_+_5031687_5031687	0.00187307	AGCCCUU	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr15_+_38544476_38544574	0.00145752	AGCCCUU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr2_+_241375069_241375136	0.0013553	AGCCCUU	ENST00000264039.2|GPC1|ENSG00000063660.4|glypican 1
hg19_v2_chr22_+_40573921_40573946	0.00133297	AGCCCUU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr17_+_43971643_43971748	0.00102341	AGCCCUU	ENST00000344290.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000262410.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000351559.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000340799.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000535772.1|MAPT|ENSG00000186868.11|microtubule-associated protein tau 	ENST00000347967.5|MAPT|ENSG00000186868.11|microtubule-associated protein tau
hg19_v2_chr19_-_11591848_11591865	0.000815914	AGCCCUU	ENST00000359227.3|ELAVL3|ENSG00000196361.5|ELAV like neuron-specific RNA binding protein 3
hg19_v2_chr1_+_23037323_23037463	0.000700154	AGCCCUU	ENST00000544305.1|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374630.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000400191.3|EPHB2|ENSG00000133216.12|EPH receptor B2 	ENST00000374632.3|EPHB2|ENSG00000133216.12|EPH receptor B2
hg19_v2_chr13_+_33590553_33590571	0.000403064	AGCCCUU	ENST00000380099.3|KL|ENSG00000133116.6|klotho
hg19_v2_chr17_-_73775839_73775868	0.000306935	AGCCCUU	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
