hg19_v2_chr9_+_90112117_90112164	0.960235	AIRE	ENST00000358077.5|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr12_-_15038779_15038860	0.937919	AIRE	ENST00000228938.5|MGP|ENSG00000111341.5|matrix Gla protein 	ENST00000539261.1|MGP|ENSG00000111341.5|matrix Gla protein
hg19_v2_chr2_-_225811747_225811796	0.84677	AIRE	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr4_-_57524061_57524074	0.806949	AIRE	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr8_+_104384616_104384661	0.76968	AIRE	ENST00000520337.1|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr12_+_75874984_75875053	0.666879	AIRE	ENST00000550491.1|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr20_+_12989596_12989642	0.553415	AIRE	ENST00000434210.1|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3 	ENST00000399002.2|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3
hg19_v2_chr6_-_31514333_31514414	0.526618	AIRE	ENST00000376151.4|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr5_+_32788945_32788945	0.524651	AIRE	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chr12_+_75874580_75874661	0.489489	AIRE	ENST00000456650.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr4_-_186696425_186696452	0.482129	AIRE	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr1_-_243326612_243326642	0.463833	AIRE	ENST00000492145.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000490813.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000464936.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr6_-_31514516_31514625	0.450534	AIRE	ENST00000303892.5|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 	ENST00000483251.1|ATP6V1G2|ENSG00000213760.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2
hg19_v2_chr12_+_75874460_75874549	0.424475	AIRE	ENST00000266659.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr12_+_55248289_55248321	0.419616	AIRE	ENST00000308796.6|MUCL1|ENSG00000172551.6|mucin-like 1
hg19_v2_chr9_-_113761720_113761756	0.370926	AIRE	ENST00000541779.1|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1 	ENST00000374430.2|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr9_-_21482312_21482312	0.370403	AIRE	ENST00000448696.3|IFNE|ENSG00000184995.6|interferon, epsilon
hg19_v2_chr10_+_90660832_90660832	0.35316	AIRE	ENST00000371924.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr19_-_52551814_52552023	0.309997	AIRE	ENST00000594154.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000598745.1|ZNF432|ENSG00000256087.2|zinc finger protein 432 	ENST00000597273.1|ZNF432|ENSG00000256087.2|zinc finger protein 432
hg19_v2_chr1_+_79115503_79115530	0.289057	AIRE	ENST00000370747.4|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000438486.1|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000545124.1|IFI44|ENSG00000137965.6|interferon-induced protein 44
hg19_v2_chr5_+_72143988_72144011	0.258461	AIRE	ENST00000506351.2|TNPO1|ENSG00000083312.13|transportin 1
hg19_v2_chrX_-_100307076_100307107	0.255893	AIRE	ENST00000338687.7|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000545398.1|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000372931.5|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v2_chr20_-_33735070_33735175	0.254665	AIRE	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chrX_-_100307043_100307072	0.251763	AIRE	ENST00000372939.1|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000372935.1|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae) 	ENST00000372936.3|TRMT2B|ENSG00000188917.10|tRNA methyltransferase 2 homolog B (S. cerevisiae)
hg19_v2_chrM_+_12331_12348	0.241286	AIRE	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr3_-_49466686_49466764	0.239322	AIRE	ENST00000273598.3|NICN1|ENSG00000145029.7|nicolin 1 	ENST00000436744.2|NICN1|ENSG00000145029.7|nicolin 1
hg19_v2_chr10_-_106240032_106240047	0.239266	AIRE	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr5_+_140625147_140625147	0.229597	AIRE	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr19_+_11455900_11455977	0.22676	AIRE	ENST00000588790.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr19_-_48752812_48752925	0.22335	AIRE	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr6_+_36839616_36839646	0.22031	AIRE	ENST00000359359.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000510325.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89
hg19_v2_chr2_-_166060571_166060582	0.219825	AIRE	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr12_-_6580094_6580153	0.217374	AIRE	ENST00000361716.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr13_+_50570019_50570028	0.215267	AIRE	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr19_-_48753104_48753123	0.214499	AIRE	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr1_+_174843548_174843609	0.210211	AIRE	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr4_-_114682936_114683083	0.199127	AIRE	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr2_-_166060552_166060566	0.196108	AIRE	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr16_+_32077386_32077386	0.182033	AIRE	ENST00000354689.6|IGHV3OR16-9|ENSG00000270472.1|immunoglobulin heavy variable 3/OR16-9 (non-functional)
hg19_v2_chr9_-_114361665_114361719	0.174584	AIRE	ENST00000309195.5|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr8_-_7220490_7220490	0.170564	AIRE	ENST00000400078.2|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr4_-_66536057_66536071	0.168628	AIRE	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr15_+_27112948_27113033	0.166243	AIRE	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr17_-_295730_295730	0.159297	AIRE	ENST00000329099.4|FAM101B|ENSG00000183688.4|family with sequence similarity 101, member B
hg19_v2_chr19_+_18208603_18208614	0.157728	AIRE	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr19_-_23869999_23870022	0.15563	AIRE	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr12_-_6579808_6579819	0.153922	AIRE	ENST00000535180.1|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1) 	ENST00000400911.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr9_-_114362093_114362138	0.152832	AIRE	ENST00000538962.1|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000407693.2|PTGR1|ENSG00000106853.12|prostaglandin reductase 1 	ENST00000238248.3|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr2_+_179316163_179316163	0.143743	AIRE	ENST00000409117.3|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr2_+_201981527_201981560	0.140685	AIRE	ENST00000441224.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr7_-_87936195_87936223	0.137169	AIRE	ENST00000414498.1|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000301959.5|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000380079.4|STEAP4|ENSG00000127954.8|STEAP family member 4
hg19_v2_chr10_-_101841588_101841634	0.135036	AIRE	ENST00000370418.3|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr9_-_114361919_114361975	0.129396	AIRE	ENST00000422125.1|PTGR1|ENSG00000106853.12|prostaglandin reductase 1
hg19_v2_chr5_-_107703556_107703655	0.127842	AIRE	ENST00000496714.1|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr9_-_4666421_4666492	0.126454	AIRE	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr14_-_24911971_24912015	0.113409	AIRE	ENST00000555365.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000399395.3|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr8_+_105352050_105352056	0.112892	AIRE	ENST00000297581.2|DCSTAMP|ENSG00000164935.2|dendrocyte expressed seven transmembrane protein
hg19_v2_chr12_+_52643077_52643093	0.112625	AIRE	ENST00000553310.2|KRT86|ENSG00000170442.7|keratin 86 	ENST00000544024.1|KRT86|ENSG00000170442.7|keratin 86
hg19_v2_chr16_+_14802801_14802801	0.112314	AIRE	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr16_+_3254247_3254247	0.110987	AIRE	ENST00000304646.2|OR1F1|ENSG00000168124.2|olfactory receptor, family 1, subfamily F, member 1
hg19_v2_chr14_+_58894706_58894720	0.110363	AIRE	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr1_-_145826450_145826450	0.109525	AIRE	ENST00000462900.2|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chr3_-_19975665_19975719	0.104966	AIRE	ENST00000295824.9|EFHB|ENSG00000163576.13|EF-hand domain family, member B 	ENST00000389256.4|EFHB|ENSG00000163576.13|EF-hand domain family, member B
hg19_v2_chr1_+_152627927_152627953	0.104179	AIRE	ENST00000444515.1|LINC00302|ENSG00000176075.6|long intergenic non-protein coding RNA 302 	ENST00000536536.1|LINC00302|ENSG00000176075.6|long intergenic non-protein coding RNA 302
hg19_v2_chr2_+_172864490_172864490	0.101505	AIRE	ENST00000315796.4|METAP1D|ENSG00000172878.9|methionyl aminopeptidase type 1D (mitochondrial)
hg19_v2_chrM_-_14670_14676	0.0991276	AIRE	ENST00000361681.2|MT-ND6|ENSG00000198695.2|mitochondrially encoded NADH dehydrogenase 6
hg19_v2_chr4_-_104119528_104119570	0.0978614	AIRE	ENST00000380026.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000503705.1|CENPE|ENSG00000138778.7|centromere protein E, 312kDa 	ENST00000265148.3|CENPE|ENSG00000138778.7|centromere protein E, 312kDa
hg19_v2_chr2_-_202508169_202508263	0.0961295	AIRE	ENST00000409883.2|TMEM237|ENSG00000155755.14|transmembrane protein 237
hg19_v2_chr5_+_122181184_122181213	0.0949066	AIRE	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr16_-_71518504_71518542	0.0920127	AIRE	ENST00000565100.2|ZNF19|ENSG00000157429.11|zinc finger protein 19
hg19_v2_chr2_+_166150541_166150594	0.0914546	AIRE	ENST00000283256.6|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr5_+_122181279_122181321	0.0889646	AIRE	ENST00000395451.4|SNX24|ENSG00000064652.6|sorting nexin 24 	ENST00000506996.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr22_+_40322595_40322618	0.0869313	AIRE	ENST00000420971.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000544756.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr15_+_52043758_52043809	0.0859323	AIRE	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr19_-_23869970_23869991	0.0850268	AIRE	ENST00000601010.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr22_+_40322623_40322646	0.084059	AIRE	ENST00000399090.2|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr14_-_24912047_24912064	0.0815114	AIRE	ENST00000553930.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr3_+_189507460_189507471	0.0802634	AIRE	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr11_+_30252549_30252565	0.077657	AIRE	ENST00000254122.3|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide 	ENST00000417547.1|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide
hg19_v2_chr8_-_7309887_7309887	0.0771626	AIRE	ENST00000458665.1|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000528168.1|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B
hg19_v2_chr17_-_38721711_38721730	0.0752137	AIRE	ENST00000578085.1|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7 	ENST00000246657.2|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7
hg19_v2_chr14_-_55658323_55658396	0.0723682	AIRE	ENST00000554067.1|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5 	ENST00000247191.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chr13_+_103459704_103459704	0.0719536	AIRE	ENST00000602836.1|BIVM-ERCC5|ENSG00000270181.1|BIVM-ERCC5 readthrough
hg19_v2_chr3_-_123710199_123710199	0.0711134	AIRE	ENST00000184183.4|ROPN1|ENSG00000065371.13|rhophilin associated tail protein 1
hg19_v2_chr20_-_43150601_43150751	0.0699643	AIRE	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr5_+_122181128_122181144	0.0684217	AIRE	ENST00000261369.4|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr19_+_11708259_11708309	0.067906	AIRE	ENST00000587939.1|ZNF627|ENSG00000198551.5|zinc finger protein 627 	ENST00000588174.1|ZNF627|ENSG00000198551.5|zinc finger protein 627
hg19_v2_chr11_+_64794875_64794983	0.0677737	AIRE	ENST00000377244.3|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000534637.1|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000524831.1|SNX15|ENSG00000110025.8|sorting nexin 15
hg19_v2_chr19_-_36643329_36643407	0.0670505	AIRE	ENST00000589154.1|COX7A1|ENSG00000161281.6|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)
hg19_v2_chr8_+_7716700_7716700	0.0664688	AIRE	ENST00000454911.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000326625.5|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A
hg19_v2_chr4_+_78829479_78829479	0.0661478	AIRE	ENST00000504901.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr12_-_76462713_76462773	0.0648672	AIRE	ENST00000552056.1|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr3_+_88199099_88199154	0.0647495	AIRE	ENST00000486971.1|C3orf38|ENSG00000179021.5|chromosome 3 open reading frame 38
hg19_v2_chr4_+_1385340_1385340	0.0640527	AIRE	ENST00000324803.4|CRIPAK|ENSG00000179979.7|cysteine-rich PAK1 inhibitor
hg19_v2_chr19_-_59084922_59084947	0.0625775	AIRE	ENST00000215057.2|MZF1|ENSG00000099326.4|myeloid zinc finger 1 	ENST00000599369.1|MZF1|ENSG00000099326.4|myeloid zinc finger 1
hg19_v2_chr18_-_37380230_37380283	0.0616268	AIRE	ENST00000591629.1|LINC00669|ENSG00000267374.1|long intergenic non-protein coding RNA 669
hg19_v2_chr1_-_35497506_35497574	0.0602081	AIRE	ENST00000317538.5|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000373340.2|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000357182.4|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6
hg19_v2_chrX_-_102941596_102941746	0.0593667	AIRE	ENST00000441076.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422355.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000442614.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422154.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000451301.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr22_+_36649056_36649164	0.0585848	AIRE	ENST00000397278.3|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000422706.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000426053.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000319136.4|APOL1|ENSG00000100342.16|apolipoprotein L, 1
hg19_v2_chr11_+_6947647_6947698	0.057816	AIRE	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr7_-_55606346_55606366	0.0575289	AIRE	ENST00000545390.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr5_+_118690466_118690505	0.0565613	AIRE	ENST00000503646.1|TNFAIP8|ENSG00000145779.7|tumor necrosis factor, alpha-induced protein 8
hg19_v2_chr17_+_3323862_3323862	0.0564566	AIRE	ENST00000291231.1|OR3A3|ENSG00000159961.1|olfactory receptor, family 3, subfamily A, member 3
hg19_v2_chr14_-_55658252_55658321	0.0539829	AIRE	ENST00000395425.2|DLGAP5|ENSG00000126787.8|discs, large (Drosophila) homolog-associated protein 5
hg19_v2_chr19_-_10491234_10491352	0.0538878	AIRE	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr11_-_18956556_18956556	0.0529004	AIRE	ENST00000302797.3|MRGPRX1|ENSG00000170255.6|MAS-related GPR, member X1
hg19_v2_chr17_+_41857793_41857814	0.0528683	AIRE	ENST00000449302.3|C17orf105|ENSG00000231256.3|chromosome 17 open reading frame 105
hg19_v2_chr3_-_139199565_139199582	0.0517972	AIRE	ENST00000511956.1|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr8_+_54764346_54764460	0.0512279	AIRE	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chr15_-_99789736_99789820	0.0512059	AIRE	ENST00000560235.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394132.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560860.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558078.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394136.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000262074.4|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558613.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394130.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560772.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr19_+_45418067_45418126	0.0504748	AIRE	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr7_-_64023441_64023484	0.0494954	AIRE	ENST00000309683.6|ZNF680|ENSG00000173041.7|zinc finger protein 680
hg19_v2_chr4_+_71587669_71587752	0.0490367	AIRE	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr4_+_76649797_76650004	0.0487871	AIRE	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr16_+_446713_446769	0.04867	AIRE	ENST00000397722.1|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4 	ENST00000454619.1|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4
hg19_v2_chrM_+_7586_7655	0.0482101	AIRE	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr3_+_39424828_39424918	0.0458115	AIRE	ENST00000273158.4|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38 	ENST00000431510.1|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38
hg19_v2_chr12_-_75603482_75603534	0.0454832	AIRE	ENST00000341669.3|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000298972.1|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000350228.2|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v2_chr19_-_35719609_35719632	0.0452508	AIRE	ENST00000324675.3|FAM187B|ENSG00000177558.3|family with sequence similarity 187, member B
hg19_v2_chr3_-_121468513_121468599	0.0441258	AIRE	ENST00000494517.1|GOLGB1|ENSG00000173230.11|golgin B1 	ENST00000393667.3|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr12_-_6579833_6579850	0.0438723	AIRE	ENST00000396308.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr17_+_77030267_77030391	0.0434626	AIRE	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr19_-_21950362_21950430	0.0426369	AIRE	ENST00000358296.6|ZNF100|ENSG00000197020.6|zinc finger protein 100
hg19_v2_chrM_+_5824_5904	0.0423579	AIRE	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr8_-_145652336_145652378	0.0419154	AIRE	ENST00000529182.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000526054.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr3_-_121468602_121468617	0.0380394	AIRE	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr12_-_11287243_11287243	0.0376691	AIRE	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr19_+_45417921_45417970	0.0369878	AIRE	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr3_-_133648656_133648656	0.0369009	AIRE	ENST00000408895.2|C3orf36|ENSG00000221972.2|chromosome 3 open reading frame 36
hg19_v2_chr7_-_137028498_137028520	0.0368668	AIRE	ENST00000393083.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr1_+_100810575_100810584	0.0367964	AIRE	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr16_+_56672571_56672587	0.0364374	AIRE	ENST00000290705.8|MT1A|ENSG00000205362.6|metallothionein 1A
hg19_v2_chr2_-_136633940_136634022	0.036075	AIRE	ENST00000264156.2|MCM6|ENSG00000076003.4|minichromosome maintenance complex component 6
hg19_v2_chr12_+_12223867_12223883	0.0349968	AIRE	ENST00000308721.5|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr16_+_50059125_50059180	0.034576	AIRE	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr4_+_71588372_71588404	0.0341744	AIRE	ENST00000536664.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr12_+_12202774_12202780	0.0341327	AIRE	ENST00000589718.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr2_+_38177575_38177612	0.0337812	AIRE	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr1_+_207669573_207669606	0.0329778	AIRE	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr12_-_59175485_59175529	0.0321545	AIRE	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr12_+_12202785_12202802	0.0312958	AIRE	ENST00000586576.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000464885.2|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr7_-_15601595_15601657	0.0312485	AIRE	ENST00000342526.3|AGMO|ENSG00000187546.9|alkylglycerol monooxygenase
hg19_v2_chr1_+_47603109_47603127	0.0303229	AIRE	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chr17_-_42019836_42019844	0.0283777	AIRE	ENST00000225992.3|PPY|ENSG00000108849.3|pancreatic polypeptide
hg19_v2_chr7_-_137028534_137028611	0.0280654	AIRE	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr6_+_118869452_118869475	0.0273948	AIRE	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr12_-_11463353_11463372	0.0270384	AIRE	ENST00000279575.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000535904.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000445719.2|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4
hg19_v2_chrX_-_139866723_139866723	0.0257267	AIRE	ENST00000370532.2|CDR1|ENSG00000184258.5|cerebellar degeneration-related protein 1, 34kDa
hg19_v2_chr20_+_21284416_21284490	0.0238222	AIRE	ENST00000539513.1|XRN2|ENSG00000088930.6|5'-3' exoribonuclease 2
hg19_v2_chr22_+_42017987_42018029	0.0236126	AIRE	ENST00000405506.1|XRCC6|ENSG00000196419.8|X-ray repair complementing defective repair in Chinese hamster cells 6
hg19_v2_chr5_+_141488070_141488094	0.023503	AIRE	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr1_+_36038971_36038971	0.023421	AIRE	ENST00000373235.3|TFAP2E|ENSG00000116819.6|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
hg19_v2_chr3_+_193965426_193965445	0.022995	AIRE	ENST00000455821.1|RP11-513G11.3|ENSG00000238097.1|RP11-513G11.3
hg19_v2_chr21_-_44495919_44495953	0.0227752	AIRE	ENST00000398158.1|CBS|ENSG00000160200.13|cystathionine-beta-synthase
hg19_v2_chr14_-_46185155_46185184	0.0218283	AIRE	ENST00000555442.1|RP11-369C8.1|ENSG00000258616.1|RP11-369C8.1
hg19_v2_chrX_+_70503433_70503517	0.0213622	AIRE	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr4_-_17513851_17513862	0.0212581	AIRE	ENST00000281243.5|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr11_-_327537_327537	0.0211655	AIRE	ENST00000602735.1|IFITM3|ENSG00000142089.11|interferon induced transmembrane protein 3
hg19_v2_chr14_+_101123580_101123695	0.0209097	AIRE	ENST00000556697.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000360899.2|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000553623.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523
hg19_v2_chr1_+_174670143_174670160	0.0200879	AIRE	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr2_-_127977654_127977654	0.0197785	AIRE	ENST00000409327.1|CYP27C1|ENSG00000186684.8|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v2_chr6_+_116937636_116937787	0.0191996	AIRE	ENST00000368581.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000229554.5|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000368580.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas)
hg19_v2_chr22_+_25202232_25202286	0.0185525	AIRE	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr16_+_72088376_72088537	0.0180007	AIRE	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr6_+_26104104_26104169	0.0178416	AIRE	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr1_-_198990166_198990193	0.0174965	AIRE	ENST00000427439.1|RP11-16L9.3|ENSG00000233410.1|RP11-16L9.3
hg19_v2_chr12_+_12224331_12224402	0.0170093	AIRE	ENST00000396367.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000266434.4|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000396369.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr10_-_46030787_46030824	0.0137759	AIRE	ENST00000395769.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr16_-_28503327_28503356	0.0100568	AIRE	ENST00000535392.1|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3 	ENST00000395653.4|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3
hg19_v2_chr20_+_54823788_54823788	0.00778474	AIRE	ENST00000243911.2|MC3R|ENSG00000124089.4|melanocortin 3 receptor
hg19_v2_chr19_+_45417812_45417869	0.00752848	AIRE	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr14_-_106668095_106668116	0.00497528	AIRE	ENST00000390606.2|IGHV3-20|ENSG00000211946.2|immunoglobulin heavy variable 3-20
hg19_v2_chr21_-_44495964_44496055	0.0047906	AIRE	ENST00000398168.1|CBS|ENSG00000160200.13|cystathionine-beta-synthase 	ENST00000398165.3|CBS|ENSG00000160200.13|cystathionine-beta-synthase
hg19_v2_chr1_-_52344471_52344481	0.00405031	AIRE	ENST00000352171.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase) 	ENST00000354831.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr2_-_198540719_198540748	0.00403013	AIRE	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr16_+_75182376_75182480	0.00344331	AIRE	ENST00000570010.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000568079.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000464850.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000332307.4|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000393430.2|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein
hg19_v2_chr10_+_82300575_82300575	0.00336167	AIRE	ENST00000313455.4|SH2D4B|ENSG00000178217.9|SH2 domain containing 4B
hg19_v2_chr14_-_75330537_75330537	0.00211292	AIRE	ENST00000556084.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000556489.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000445876.1|PROX2|ENSG00000119608.8|prospero homeobox 2
hg19_v2_chr2_-_89568263_89568263	0.00198314	AIRE	ENST00000473726.1|IGKV1-33|ENSG00000242076.1|immunoglobulin kappa variable 1-33
hg19_v2_chr1_-_161208013_161208092	0.00159406	AIRE	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_-_154600421_154600480	0.000609694	AIRE	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr17_+_34171081_34171145	0.000296772	AIRE	ENST00000585577.1|TAF15|ENSG00000172660.7|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
