hg19_v2_chr10_+_69865866_69865912	0.75064	ALX1_ARX	ENST00000354393.2|MYPN|ENSG00000138347.11|myopalladin
hg19_v2_chr1_-_92371839_92371892	0.521667	ALX1_ARX	ENST00000370399.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr12_-_91546926_91546972	0.463534	ALX1_ARX	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr2_-_145278475_145278621	0.342466	ALX1_ARX	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr3_-_195310802_195310818	0.294292	ALX1_ARX	ENST00000421243.1|APOD|ENSG00000189058.4|apolipoprotein D 	ENST00000453131.1|APOD|ENSG00000189058.4|apolipoprotein D
hg19_v2_chr1_+_183774240_183774270	0.287841	ALX1_ARX	ENST00000360851.3|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr5_-_111312622_111312634	0.222059	ALX1_ARX	ENST00000395634.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr2_+_152214098_152214115	0.193655	ALX1_ARX	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr1_-_232651312_232651312	0.168777	ALX1_ARX	ENST00000262861.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr6_-_154751629_154751694	0.160741	ALX1_ARX	ENST00000424998.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr20_+_31823792_31823808	0.152463	ALX1_ARX	ENST00000375413.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000354297.4|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1 	ENST00000375422.2|BPIFA1|ENSG00000198183.7|BPI fold containing family A, member 1
hg19_v2_chr3_+_12329358_12329393	0.150841	ALX1_ARX	ENST00000309576.6|PPARG|ENSG00000132170.15|peroxisome proliferator-activated receptor gamma
hg19_v2_chr12_-_52946923_52946931	0.143982	ALX1_ARX	ENST00000267119.5|KRT71|ENSG00000139648.6|keratin 71
hg19_v2_chr3_+_12329397_12329433	0.143338	ALX1_ARX	ENST00000397015.2|PPARG|ENSG00000132170.15|peroxisome proliferator-activated receptor gamma
hg19_v2_chr11_-_96076334_96076419	0.139543	ALX1_ARX	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chrX_+_77166172_77166261	0.131135	ALX1_ARX	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr8_-_122653630_122653661	0.130104	ALX1_ARX	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr12_+_59989918_59989965	0.125539	ALX1_ARX	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr3_-_164914640_164914667	0.115305	ALX1_ARX	ENST00000241274.3|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr7_+_90338712_90338907	0.114652	ALX1_ARX	ENST00000265741.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14 	ENST00000406263.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr12_+_18414446_18414474	0.111108	ALX1_ARX	ENST00000433979.1|PIK3C2G|ENSG00000139144.5|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma
hg19_v2_chr10_+_89420706_89420712	0.109051	ALX1_ARX	ENST00000427144.2|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
hg19_v2_chr6_+_34204642_34204664	0.109024	ALX1_ARX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr16_+_53133070_53133081	0.10656	ALX1_ARX	ENST00000565832.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr17_+_39240459_39240459	0.102566	ALX1_ARX	ENST00000391417.4|KRTAP4-7|ENSG00000240871.3|keratin associated protein 4-7
hg19_v2_chr2_-_145275228_145275464	0.101687	ALX1_ARX	ENST00000427902.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000409487.3|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000470879.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000435831.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr11_-_82708435_82708472	0.0971573	ALX1_ARX	ENST00000525117.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000532548.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr3_-_157824292_157824334	0.0923533	ALX1_ARX	ENST00000483851.2|SHOX2|ENSG00000168779.15|short stature homeobox 2
hg19_v2_chr8_+_38677850_38678065	0.0840535	ALX1_ARX	ENST00000518809.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520611.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chrX_-_15332665_15332693	0.0799595	ALX1_ARX	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr15_-_52970820_52970960	0.0777298	ALX1_ARX	ENST00000261844.7|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000399202.4|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000562135.1|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr12_-_92539614_92539673	0.0775337	ALX1_ARX	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr5_+_140762268_140762467	0.0707992	ALX1_ARX	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr19_+_50016610_50016658	0.0685299	ALX1_ARX	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr8_-_57123815_57123867	0.0679776	ALX1_ARX	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr1_+_206557366_206557368	0.0673937	ALX1_ARX	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr10_-_31146615_31146708	0.0660634	ALX1_ARX	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr15_+_44719970_44719991	0.0643092	ALX1_ARX	ENST00000558966.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr5_-_160279207_160279247	0.0630188	ALX1_ARX	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr14_+_95078714_95078739	0.0625895	ALX1_ARX	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr8_-_26724784_26724800	0.0618999	ALX1_ARX	ENST00000380573.3|ADRA1A|ENSG00000120907.13|adrenoceptor alpha 1A
hg19_v2_chr3_+_111393501_111393538	0.0609133	ALX1_ARX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr2_-_145277882_145277967	0.0591569	ALX1_ARX	ENST00000465070.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000444559.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr17_+_44588877_44588877	0.058365	ALX1_ARX	ENST00000576629.1|LRRC37A2|ENSG00000238083.3|leucine rich repeat containing 37, member A2
hg19_v2_chr4_-_83769996_83770031	0.0581543	ALX1_ARX	ENST00000511338.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr17_-_5321549_5321549	0.0531732	ALX1_ARX	ENST00000572809.1|NUP88|ENSG00000108559.7|nucleoporin 88kDa
hg19_v2_chr3_+_138340049_138340056	0.0528422	ALX1_ARX	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr5_+_137203465_137203480	0.0524521	ALX1_ARX	ENST00000239926.4|MYOT|ENSG00000120729.5|myotilin
hg19_v2_chr18_+_66465302_66465324	0.0521938	ALX1_ARX	ENST00000360242.5|CCDC102B|ENSG00000150636.11|coiled-coil domain containing 102B 	ENST00000358653.5|CCDC102B|ENSG00000150636.11|coiled-coil domain containing 102B
hg19_v2_chr10_-_29923893_29923907	0.0517177	ALX1_ARX	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr1_+_84630645_84630652	0.0509898	ALX1_ARX	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr1_-_12946025_12946025	0.0506022	ALX1_ARX	ENST00000235349.5|PRAMEF4|ENSG00000243073.3|PRAME family member 4
hg19_v2_chr15_-_26874230_26874243	0.049383	ALX1_ARX	ENST00000400188.3|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr9_-_95298314_95298340	0.0489216	ALX1_ARX	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr5_+_140743859_140743898	0.0487216	ALX1_ARX	ENST00000518069.1|PCDHGA5|ENSG00000253485.1|protocadherin gamma subfamily A, 5
hg19_v2_chr13_-_81801115_81801122	0.048578	ALX1_ARX	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr7_-_140482926_140482957	0.0483062	ALX1_ARX	ENST00000496384.2|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chr7_+_138915102_138915102	0.0472328	ALX1_ARX	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr10_+_134150835_134150852	0.0468362	ALX1_ARX	ENST00000432555.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr6_+_31895254_31895274	0.0464886	ALX1_ARX	ENST00000299367.5|C2|ENSG00000166278.10|complement component 2 	ENST00000442278.2|C2|ENSG00000166278.10|complement component 2
hg19_v2_chr5_+_59783540_59783584	0.0460175	ALX1_ARX	ENST00000515734.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr2_+_179318295_179318295	0.0459062	ALX1_ARX	ENST00000442710.1|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr2_+_161993465_161993481	0.0458789	ALX1_ARX	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr3_+_40518599_40518664	0.0445654	ALX1_ARX	ENST00000314686.5|ZNF619|ENSG00000177873.8|zinc finger protein 619 	ENST00000447116.2|ZNF619|ENSG00000177873.8|zinc finger protein 619 	ENST00000429348.2|ZNF619|ENSG00000177873.8|zinc finger protein 619 	ENST00000456778.1|ZNF619|ENSG00000177873.8|zinc finger protein 619
hg19_v2_chr14_+_57671888_57671888	0.0436927	ALX1_ARX	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chrX_+_36246735_36246735	0.0433772	ALX1_ARX	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr2_+_65215604_65215625	0.0430989	ALX1_ARX	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr4_-_119759795_119759833	0.0419786	ALX1_ARX	ENST00000419654.2|SEC24D|ENSG00000150961.10|SEC24 family member D
hg19_v2_chr13_+_53602894_53602924	0.0412907	ALX1_ARX	ENST00000219022.2|OLFM4|ENSG00000102837.6|olfactomedin 4
hg19_v2_chr1_+_44679159_44679189	0.0397075	ALX1_ARX	ENST00000315913.5|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000372289.2|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr2_+_101437487_101437619	0.0382887	ALX1_ARX	ENST00000427413.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2 	ENST00000542504.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr1_+_158978768_158978800	0.0371156	ALX1_ARX	ENST00000447473.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr1_+_44679113_44679152	0.0369855	ALX1_ARX	ENST00000361745.6|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000446292.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000440641.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000436069.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1 	ENST00000437511.1|DMAP1|ENSG00000178028.9|DNA methyltransferase 1 associated protein 1
hg19_v2_chr2_+_161993412_161993453	0.0369746	ALX1_ARX	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr3_-_124774802_124774852	0.0367423	ALX1_ARX	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr17_-_71228357_71228533	0.0365133	ALX1_ARX	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chrX_+_36254051_36254051	0.036313	ALX1_ARX	ENST00000378657.4|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr11_+_120973375_120973375	0.0359431	ALX1_ARX	ENST00000264037.2|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr12_-_118796910_118796943	0.0353684	ALX1_ARX	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr7_+_148287657_148287657	0.0351554	ALX1_ARX	ENST00000307003.2|C7orf33|ENSG00000170279.2|chromosome 7 open reading frame 33
hg19_v2_chr1_+_154401791_154401819	0.0351152	ALX1_ARX	ENST00000476006.1|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr8_+_11961898_11961898	0.0344508	ALX1_ARX	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chrX_-_48858667_48858680	0.0344479	ALX1_ARX	ENST00000376423.4|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376441.1|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr12_+_12878829_12878871	0.0342899	ALX1_ARX	ENST00000326765.6|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr12_-_53601055_53601091	0.0337674	ALX1_ARX	ENST00000552972.1|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000422257.3|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000267082.5|ITGB7|ENSG00000139626.11|integrin, beta 7
hg19_v2_chr15_+_51669444_51669479	0.0337234	ALX1_ARX	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr3_+_138340067_138340080	0.0334856	ALX1_ARX	ENST00000479848.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chrX_-_48858630_48858660	0.03347	ALX1_ARX	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr1_+_52682052_52682052	0.0328584	ALX1_ARX	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr4_+_113568207_113568367	0.0322403	ALX1_ARX	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr12_-_53601000_53601043	0.0316226	ALX1_ARX	ENST00000338737.4|ITGB7|ENSG00000139626.11|integrin, beta 7 	ENST00000549086.2|ITGB7|ENSG00000139626.11|integrin, beta 7
hg19_v2_chr8_-_62602327_62602408	0.0315852	ALX1_ARX	ENST00000445642.3|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517847.2|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000389204.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517661.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517903.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522603.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522349.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522835.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000541428.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518306.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr4_+_74347400_74347479	0.0314012	ALX1_ARX	ENST00000226355.3|AFM|ENSG00000079557.3|afamin
hg19_v2_chr3_-_47934234_47934325	0.0311415	ALX1_ARX	ENST00000420772.2|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr7_+_90339169_90339182	0.0304564	ALX1_ARX	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr19_-_6393216_6393229	0.0304045	ALX1_ARX	ENST00000595047.1|GTF2F1|ENSG00000125651.9|general transcription factor IIF, polypeptide 1, 74kDa
hg19_v2_chrX_-_19817869_19817922	0.0303276	ALX1_ARX	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr6_-_111804905_111804921	0.0302805	ALX1_ARX	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr7_-_14880892_14881075	0.0300912	ALX1_ARX	ENST00000406247.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000399322.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000258767.5|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr5_+_68860949_68860949	0.0287699	ALX1_ARX	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr4_-_83765613_83765662	0.027791	ALX1_ARX	ENST00000503937.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr2_+_54683419_54683442	0.0273221	ALX1_ARX	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr5_+_140514782_140514851	0.0272578	ALX1_ARX	ENST00000231134.5|PCDHB5|ENSG00000113209.6|protocadherin beta 5
hg19_v2_chr17_-_39623681_39623681	0.027129	ALX1_ARX	ENST00000225899.3|KRT32|ENSG00000108759.3|keratin 32
hg19_v2_chr17_+_71228793_71228838	0.0264565	ALX1_ARX	ENST00000426147.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr5_+_140079919_140080042	0.0262301	ALX1_ARX	ENST00000274712.3|ZMAT2|ENSG00000146007.6|zinc finger, matrin-type 2
hg19_v2_chr14_-_81425828_81425857	0.0257278	ALX1_ARX	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr7_+_55980331_55980331	0.0254341	ALX1_ARX	ENST00000429591.2|ZNF713|ENSG00000178665.10|zinc finger protein 713
hg19_v2_chrX_+_16668278_16668282	0.0243987	ALX1_ARX	ENST00000380200.3|S100G|ENSG00000169906.5|S100 calcium binding protein G
hg19_v2_chr14_-_101036119_101036131	0.0242469	ALX1_ARX	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr15_-_75748115_75748126	0.0240146	ALX1_ARX	ENST00000360439.4|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr17_+_71228537_71228668	0.0237615	ALX1_ARX	ENST00000577615.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000585109.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr21_+_48055527_48055608	0.0236754	ALX1_ARX	ENST00000397638.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000458387.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000451211.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000291705.6|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397637.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000334494.4|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397628.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000440086.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2
hg19_v2_chr6_-_107235331_107235354	0.0233901	ALX1_ARX	ENST00000433965.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1	ENST00000430094.1|RP1-60O19.1|ENSG00000235142.3|RP1-60O19.1
hg19_v2_chr1_+_192127578_192127613	0.0231853	ALX1_ARX	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chr2_+_228678550_228678570	0.0228981	ALX1_ARX	ENST00000409189.3|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20 	ENST00000358813.4|CCL20|ENSG00000115009.7|chemokine (C-C motif) ligand 20
hg19_v2_chr10_+_53806501_53806537	0.021757	ALX1_ARX	ENST00000373975.2|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr10_+_35464513_35464631	0.021074	ALX1_ARX	ENST00000494479.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463314.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000342105.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000495301.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463960.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr19_-_54619006_54619055	0.0197838	ALX1_ARX	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chrX_+_38211777_38211798	0.0197005	ALX1_ARX	ENST00000039007.4|OTC|ENSG00000036473.6|ornithine carbamoyltransferase
hg19_v2_chr4_+_88754113_88754139	0.0191738	ALX1_ARX	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr18_-_21891460_21891506	0.0179929	ALX1_ARX	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr3_-_186262166_186262240	0.0178269	ALX1_ARX	ENST00000307944.5|CRYGS|ENSG00000213139.3|crystallin, gamma S
hg19_v2_chr5_-_39270725_39270771	0.0177019	ALX1_ARX	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr5_+_38148582_38148600	0.0172221	ALX1_ARX	ENST00000508853.1|CTD-2207A17.1|ENSG00000248461.1|CTD-2207A17.1
hg19_v2_chr4_+_76649797_76650004	0.0165547	ALX1_ARX	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr21_+_17442799_17442853	0.0160849	ALX1_ARX	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr8_+_7353368_7353368	0.0151753	ALX1_ARX	ENST00000355602.2|DEFB107B|ENSG00000198129.2|defensin, beta 107B
hg19_v2_chr5_+_59783941_59784066	0.0151332	ALX1_ARX	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr1_+_186265399_186265414	0.0149576	ALX1_ARX	ENST00000367486.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367484.3|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000533951.1|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367482.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367483.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000367485.4|PRG4|ENSG00000116690.7|proteoglycan 4 	ENST00000445192.2|PRG4|ENSG00000116690.7|proteoglycan 4
hg19_v2_chr11_+_62496114_62496322	0.0144745	ALX1_ARX	ENST00000532583.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr5_+_133562095_133562118	0.0143141	ALX1_ARX	ENST00000602919.1|CTD-2410N18.3|ENSG00000270177.1|CTD-2410N18.3
hg19_v2_chr15_+_43477580_43477656	0.0142352	ALX1_ARX	ENST00000356633.5|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr6_-_76072719_76072770	0.0139873	ALX1_ARX	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr2_-_70529180_70529222	0.0132056	ALX1_ARX	ENST00000450256.1|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A 	ENST00000037869.3|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A
hg19_v2_chr17_-_3030875_3030875	0.0127483	ALX1_ARX	ENST00000328890.2|OR1G1|ENSG00000183024.3|olfactory receptor, family 1, subfamily G, member 1
hg19_v2_chr15_+_66874502_66874528	0.0125974	ALX1_ARX	ENST00000558797.1|RP11-321F6.1|ENSG00000259471.1|HCG2003567; Uncharacterized protein
hg19_v2_chr3_+_159943362_159943423	0.0124409	ALX1_ARX	ENST00000326474.3|C3orf80|ENSG00000180044.3|chromosome 3 open reading frame 80
hg19_v2_chr5_+_137203557_137203571	0.0124275	ALX1_ARX	ENST00000515645.1|MYOT|ENSG00000120729.5|myotilin
hg19_v2_chr14_+_24099318_24099333	0.0118911	ALX1_ARX	ENST00000432832.2|DHRS2|ENSG00000100867.10|dehydrogenase/reductase (SDR family) member 2
hg19_v2_chr17_+_75181292_75181298	0.0115512	ALX1_ARX	ENST00000431431.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr16_+_1728257_1728296	0.0114698	ALX1_ARX	ENST00000248098.3|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000562684.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000561516.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382711.5|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000566742.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr16_+_68119247_68119293	0.011357	ALX1_ARX	ENST00000575270.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr17_+_71228740_71228776	0.0113048	ALX1_ARX	ENST00000268942.8|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000359042.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr12_-_10151773_10151899	0.011003	ALX1_ARX	ENST00000298527.6|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B 	ENST00000348658.4|CLEC1B|ENSG00000165682.10|C-type lectin domain family 1, member B
hg19_v2_chr15_+_57511609_57511664	0.0109244	ALX1_ARX	ENST00000543579.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000537840.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000343827.3|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr6_-_150067696_150067814	0.0108119	ALX1_ARX	ENST00000340413.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367403.3|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr1_-_151148492_151148512	0.010702	ALX1_ARX	ENST00000295314.4|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle)
hg19_v2_chr3_-_12587055_12587055	0.010441	ALX1_ARX	ENST00000564146.3|C3orf83|ENSG00000225526.4|chromosome 3 open reading frame 83
hg19_v2_chr8_+_77318769_77318889	0.00952252	ALX1_ARX	ENST00000518732.1|RP11-706J10.1|ENSG00000254300.1|long intergenic non-protein coding RNA 1111
hg19_v2_chr11_-_111649015_111649030	0.0093614	ALX1_ARX	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr8_-_57472154_57472382	0.0087529	ALX1_ARX	ENST00000499425.1|LINC00968|ENSG00000246430.2|long intergenic non-protein coding RNA 968 	ENST00000523664.1|LINC00968|ENSG00000246430.2|long intergenic non-protein coding RNA 968 	ENST00000518943.1|LINC00968|ENSG00000246430.2|long intergenic non-protein coding RNA 968 	ENST00000524338.1|LINC00968|ENSG00000246430.2|long intergenic non-protein coding RNA 968
hg19_v2_chr9_+_44867571_44867571	0.00841785	ALX1_ARX	ENST00000377548.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr19_-_6393465_6393479	0.00839681	ALX1_ARX	ENST00000394456.5|GTF2F1|ENSG00000125651.9|general transcription factor IIF, polypeptide 1, 74kDa
hg19_v2_chrX_-_138724994_138725023	0.00838739	ALX1_ARX	ENST00000536274.1|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence
hg19_v2_chr4_-_100356291_100356446	0.00824396	ALX1_ARX	ENST00000476959.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 	ENST00000482593.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr6_-_133055815_133055834	0.00819289	ALX1_ARX	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chrX_+_35937843_35937868	0.00747048	ALX1_ARX	ENST00000297866.5|CXorf22|ENSG00000165164.8|chromosome X open reading frame 22
hg19_v2_chr2_+_74685413_74685456	0.00729376	ALX1_ARX	ENST00000233615.2|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr3_+_155860751_155860786	0.00718119	ALX1_ARX	ENST00000471742.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr6_-_133055896_133055910	0.00711463	ALX1_ARX	ENST00000367927.5|VNN3|ENSG00000093134.9|vanin 3 	ENST00000425515.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000207771.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000392393.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000450865.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000392394.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr7_-_7575477_7575491	0.00699444	ALX1_ARX	ENST00000399429.3|COL28A1|ENSG00000215018.5|collagen, type XXVIII, alpha 1
hg19_v2_chr11_+_95523621_95523710	0.00679279	ALX1_ARX	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr11_-_58499434_58499452	0.00666383	ALX1_ARX	ENST00000344743.3|GLYAT|ENSG00000149124.6|glycine-N-acyltransferase 	ENST00000278400.3|GLYAT|ENSG00000149124.6|glycine-N-acyltransferase
hg19_v2_chr8_-_61880248_61880334	0.00659653	ALX1_ARX	ENST00000525556.1|AC022182.3|ENSG00000254802.1|AC022182.3
hg19_v2_chr12_-_57873631_57873672	0.0065822	ALX1_ARX	ENST00000393791.3|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000356411.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000552249.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr12_+_122241928_122242086	0.00566971	ALX1_ARX	ENST00000604567.1|SETD1B|ENSG00000139718.6|SET domain containing 1B 	ENST00000542440.1|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr4_-_89951028_89951062	0.00533939	ALX1_ARX	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr2_+_119699742_119699777	0.00504269	ALX1_ARX	ENST00000327097.4|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chrM_+_7586_7655	0.00489698	ALX1_ARX	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr9_+_77230499_77230516	0.00488596	ALX1_ARX	ENST00000396204.2|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr1_-_151148442_151148469	0.00438119	ALX1_ARX	ENST00000441701.1|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle) 	ENST00000416280.2|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle)
hg19_v2_chr1_-_154600421_154600480	0.00435492	ALX1_ARX	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr1_-_13390765_13390765	0.00406803	ALX1_ARX	ENST00000357367.2|PRAMEF8|ENSG00000182330.6|PRAME family member 8
hg19_v2_chr19_-_58485895_58485905	0.00345647	ALX1_ARX	ENST00000314391.3|C19orf18|ENSG00000177025.3|chromosome 19 open reading frame 18
hg19_v2_chr6_-_41039567_41039597	0.00324268	ALX1_ARX	ENST00000468811.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr16_+_68119324_68119364	0.00285185	ALX1_ARX	ENST00000349223.5|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr15_+_44092784_44092823	0.00277106	ALX1_ARX	ENST00000458412.1|HYPK|ENSG00000242028.1|huntingtin interacting protein K
hg19_v2_chr2_+_36923830_36923874	0.00266362	ALX1_ARX	ENST00000379242.3|VIT|ENSG00000205221.8|vitrin 	ENST00000389975.3|VIT|ENSG00000205221.8|vitrin
hg19_v2_chr3_+_151591422_151591440	0.00242736	ALX1_ARX	ENST00000362032.5|SUCNR1|ENSG00000198829.5|succinate receptor 1
hg19_v2_chr1_-_110155671_110155685	0.00236425	ALX1_ARX	ENST00000351050.3|GNAT2|ENSG00000134183.7|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
hg19_v2_chr1_+_104615595_104615645	0.00170714	ALX1_ARX	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr3_+_140660743_140660758	0.00132019	ALX1_ARX	ENST00000453248.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr14_+_38264418_38264513	0.000602939	ALX1_ARX	ENST00000267368.7|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6 	ENST00000382320.3|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr2_+_185463093_185463181	0.000480228	ALX1_ARX	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr3_+_39424828_39424918	0.000471607	ALX1_ARX	ENST00000273158.4|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38 	ENST00000431510.1|SLC25A38|ENSG00000144659.6|solute carrier family 25, member 38
hg19_v2_chr3_-_101039402_101039429	0.000462915	ALX1_ARX	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr4_+_95128748_95128794	0.00040237	ALX1_ARX	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr11_+_18433840_18433917	0.000300642	ALX1_ARX	ENST00000541669.1|LDHC|ENSG00000166796.7|lactate dehydrogenase C 	ENST00000280704.4|LDHC|ENSG00000166796.7|lactate dehydrogenase C
hg19_v2_chr16_+_68119440_68119561	5.01219e-05	ALX1_ARX	ENST00000346183.3|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000329524.4|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
