hg19_v2_chrX_+_152953505_152953554	0.372926	AUGGCUU	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chr8_+_24772455_24772535	0.35177	AUGGCUU	ENST00000433454.2|NEFM|ENSG00000104722.9|neurofilament, medium polypeptide
hg19_v2_chr6_-_99797522_99797572	0.333076	AUGGCUU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr17_-_56494713_56494851	0.330345	AUGGCUU	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr7_-_41742697_41742714	0.315748	AUGGCUU	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr22_+_40390930_40390994	0.302729	AUGGCUU	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr9_+_2621798_2621834	0.298712	AUGGCUU	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr2_+_18059906_18059945	0.27854	AUGGCUU	ENST00000304101.4|KCNS3|ENSG00000170745.7|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg19_v2_chrX_-_24690771_24690794	0.250353	AUGGCUU	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr12_+_101188547_101188585	0.249219	AUGGCUU	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr7_-_83824169_83824217	0.247818	AUGGCUU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr11_-_119599794_119599857	0.242699	AUGGCUU	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr16_+_577697_577856	0.242036	AUGGCUU	ENST00000562370.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000568988.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000219611.2|CAPN15|ENSG00000103326.6|calpain 15
hg19_v2_chr12_+_104850740_104850768	0.237163	AUGGCUU	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr8_-_66754172_66754201	0.226699	AUGGCUU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr8_+_104831472_104831510	0.222526	AUGGCUU	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr22_+_29279552_29279586	0.212755	AUGGCUU	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr11_-_115375107_115375283	0.208071	AUGGCUU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr1_+_107683644_107683673	0.190953	AUGGCUU	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr7_+_97736197_97736211	0.190173	AUGGCUU	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr7_-_139876812_139876860	0.187334	AUGGCUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr4_-_111119804_111119832	0.186043	AUGGCUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr19_-_55954230_55954230	0.183811	AUGGCUU	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr12_-_54779511_54779577	0.182387	AUGGCUU	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr9_-_126030817_126030906	0.181778	AUGGCUU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr6_-_116381918_116381977	0.174477	AUGGCUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr3_+_113666748_113666846	0.173743	AUGGCUU	ENST00000330212.3|ZDHHC23|ENSG00000184307.9|zinc finger, DHHC-type containing 23 	ENST00000498275.1|ZDHHC23|ENSG00000184307.9|zinc finger, DHHC-type containing 23
hg19_v2_chr1_-_94374946_94374994	0.170308	AUGGCUU	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr8_-_104427313_104427413	0.168421	AUGGCUU	ENST00000297578.4|SLC25A32|ENSG00000164933.7|solute carrier family 25 (mitochondrial folate carrier), member 32
hg19_v2_chr17_-_7197881_7197901	0.168164	AUGGCUU	ENST00000007699.5|YBX2|ENSG00000006047.8|Y box binding protein 2
hg19_v2_chr6_+_18155560_18155624	0.167512	AUGGCUU	ENST00000546309.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000388870.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000397244.1|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B
hg19_v2_chr10_+_5454505_5454540	0.165355	AUGGCUU	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr8_-_119124045_119124097	0.163687	AUGGCUU	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr3_-_79068594_79068627	0.156627	AUGGCUU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr22_+_50247449_50247515	0.155508	AUGGCUU	ENST00000216268.5|ZBED4|ENSG00000100426.6|zinc finger, BED-type containing 4
hg19_v2_chr13_-_76056250_76056280	0.153895	AUGGCUU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr15_-_34628951_34629045	0.150371	AUGGCUU	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr2_-_40679186_40679297	0.150098	AUGGCUU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr10_+_101419187_101419313	0.149659	AUGGCUU	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chr5_+_149109825_149109907	0.147713	AUGGCUU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr17_-_44896047_44896126	0.147283	AUGGCUU	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr15_+_42066632_42066722	0.147063	AUGGCUU	ENST00000457542.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000221214.6|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000260357.7|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1 	ENST00000456763.2|MAPKBP1|ENSG00000137802.9|mitogen-activated protein kinase binding protein 1
hg19_v2_chr1_+_65210772_65210840	0.146563	AUGGCUU	ENST00000371072.4|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2 	ENST00000294428.3|RAVER2|ENSG00000162437.10|ribonucleoprotein, PTB-binding 2
hg19_v2_chr16_-_84538218_84538364	0.14519	AUGGCUU	ENST00000562447.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000565765.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000535580.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000343629.6|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1
hg19_v2_chr8_-_20161466_20161481	0.14341	AUGGCUU	ENST00000381569.1|LZTS1|ENSG00000061337.11|leucine zipper, putative tumor suppressor 1
hg19_v2_chr6_-_11044509_11044582	0.139945	AUGGCUU	ENST00000354666.3|ELOVL2|ENSG00000197977.3|ELOVL fatty acid elongase 2
hg19_v2_chr7_-_138666053_138666146	0.138462	AUGGCUU	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr10_-_89577910_89578010	0.133505	AUGGCUU	ENST00000308448.7|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1 	ENST00000541004.1|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1
hg19_v2_chr7_-_112430647_112430776	0.131531	AUGGCUU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr3_+_3841108_3841126	0.128804	AUGGCUU	ENST00000319331.3|LRRN1|ENSG00000175928.5|leucine rich repeat neuronal 1
hg19_v2_chr13_+_31774073_31774153	0.128354	AUGGCUU	ENST00000343307.4|B3GALTL|ENSG00000187676.7|beta 1,3-galactosyltransferase-like
hg19_v2_chr10_-_52383644_52383743	0.127598	AUGGCUU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr8_+_98656336_98656535	0.126209	AUGGCUU	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr12_+_4382917_4382938	0.126069	AUGGCUU	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr6_-_107436473_107436543	0.125634	AUGGCUU	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr8_+_1449532_1449532	0.123636	AUGGCUU	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr2_-_47798044_47798132	0.121728	AUGGCUU	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr12_-_25102252_25102393	0.11989	AUGGCUU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr11_-_101454658_101454671	0.119791	AUGGCUU	ENST00000344327.3|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr1_+_203595903_203595934	0.1187	AUGGCUU	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr1_-_155942086_155942145	0.11773	AUGGCUU	ENST00000368315.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr8_+_94929168_94929235	0.113881	AUGGCUU	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr15_-_68498376_68498417	0.113614	AUGGCUU	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr2_-_129076151_129076151	0.112777	AUGGCUU	ENST00000259241.6|HS6ST1|ENSG00000136720.6|heparan sulfate 6-O-sulfotransferase 1
hg19_v2_chr3_+_122513642_122513664	0.111194	AUGGCUU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr3_-_171178157_171178225	0.110985	AUGGCUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr2_+_48541776_48541874	0.110354	AUGGCUU	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr6_-_10415470_10415508	0.109884	AUGGCUU	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr4_-_819901_819986	0.109741	AUGGCUU	ENST00000304062.6|CPLX1|ENSG00000168993.10|complexin 1
hg19_v2_chr13_-_86373536_86373623	0.108253	AUGGCUU	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr17_-_60005365_60005377	0.103701	AUGGCUU	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr8_-_8751068_8751158	0.103549	AUGGCUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr20_-_48330377_48330441	0.101453	AUGGCUU	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chr11_+_121322832_121322912	0.10123	AUGGCUU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr1_+_27153173_27153230	0.0996333	AUGGCUU	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr1_-_10856694_10856715	0.0983697	AUGGCUU	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr8_-_141645645_141645783	0.0945772	AUGGCUU	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr9_+_77112244_77112281	0.0942342	AUGGCUU	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr13_+_95254085_95254171	0.0920913	AUGGCUU	ENST00000376958.4|GPR180|ENSG00000152749.7|G protein-coupled receptor 180
hg19_v2_chr7_-_35734730_35734777	0.0901029	AUGGCUU	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr11_+_20620946_20620946	0.0899159	AUGGCUU	ENST00000525748.1|SLC6A5|ENSG00000165970.7|solute carrier family 6 (neurotransmitter transporter), member 5
hg19_v2_chr7_+_77325738_77325789	0.0898263	AUGGCUU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chrX_+_12156582_12156603	0.0894222	AUGGCUU	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr15_+_59730348_59730435	0.0890941	AUGGCUU	ENST00000288228.5|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000559628.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000557914.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000560474.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A
hg19_v2_chr6_+_11094266_11094506	0.0888014	AUGGCUU	ENST00000416247.2|SMIM13|ENSG00000224531.4|small integral membrane protein 13
hg19_v2_chr13_+_80055284_80055295	0.0885122	AUGGCUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr9_+_131843377_131843413	0.0880637	AUGGCUU	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr2_+_32390925_32390941	0.0869491	AUGGCUU	ENST00000440718.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000379343.2|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000282587.5|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000435660.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000538303.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000357055.3|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6 	ENST00000406369.1|SLC30A6|ENSG00000152683.10|solute carrier family 30 (zinc transporter), member 6
hg19_v2_chr7_-_71801980_71802013	0.0859626	AUGGCUU	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr7_-_107204337_107204485	0.0848673	AUGGCUU	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr8_-_29208183_29208208	0.0842979	AUGGCUU	ENST00000240100.2|DUSP4|ENSG00000120875.4|dual specificity phosphatase 4
hg19_v2_chr3_-_151176497_151176497	0.0830665	AUGGCUU	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr1_-_157108130_157108173	0.0827402	AUGGCUU	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr19_+_4007644_4007699	0.0804262	AUGGCUU	ENST00000262971.2|PIAS4|ENSG00000105229.2|protein inhibitor of activated STAT, 4
hg19_v2_chr19_-_44143939_44144010	0.0799309	AUGGCUU	ENST00000222374.2|CADM4|ENSG00000105767.2|cell adhesion molecule 4
hg19_v2_chr2_+_183580954_183581049	0.0796637	AUGGCUU	ENST00000264065.7|DNAJC10|ENSG00000077232.12|DnaJ (Hsp40) homolog, subfamily C, member 10
hg19_v2_chr16_+_1662326_1662442	0.079286	AUGGCUU	ENST00000397412.3|CRAMP1L|ENSG00000007545.11|Crm, cramped-like (Drosophila)
hg19_v2_chr1_-_184723942_184724047	0.078118	AUGGCUU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr3_-_119813264_119813272	0.0773588	AUGGCUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr1_-_68962782_68962801	0.076994	AUGGCUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr7_-_32338917_32338946	0.0768551	AUGGCUU	ENST00000396193.1|PDE1C|ENSG00000154678.12|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v2_chr5_-_98262240_98262240	0.0765264	AUGGCUU	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chrX_+_56259316_56259480	0.0747778	AUGGCUU	ENST00000468660.1|KLF8|ENSG00000102349.10|Kruppel-like factor 8
hg19_v2_chr2_+_238536207_238536290	0.0737677	AUGGCUU	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr10_-_62149433_62149488	0.0730007	AUGGCUU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr13_-_107187462_107187462	0.0727942	AUGGCUU	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr18_+_42260861_42260882	0.0713858	AUGGCUU	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr15_-_68521996_68522085	0.0702569	AUGGCUU	ENST00000418702.2|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000565471.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000564752.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000562767.1|RP11-315D16.2|ENSG00000260007.1|Uncharacterized protein  	ENST00000566347.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000249806.5|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant
hg19_v2_chr7_+_4721885_4721945	0.0684751	AUGGCUU	ENST00000328914.4|FOXK1|ENSG00000164916.9|forkhead box K1
hg19_v2_chr6_-_86352642_86352709	0.0673847	AUGGCUU	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr7_-_75988321_75988348	0.0671819	AUGGCUU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr17_+_12569306_12569344	0.0669188	AUGGCUU	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr21_-_43346790_43346823	0.06532	AUGGCUU	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr10_+_88516396_88516426	0.0651617	AUGGCUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr1_-_212004090_212004168	0.0646609	AUGGCUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr1_+_28995231_28995250	0.0644327	AUGGCUU	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr1_+_15943995_15944014	0.0636358	AUGGCUU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr14_-_75179774_75179818	0.0635617	AUGGCUU	ENST00000555249.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000556202.1|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1 	ENST00000338772.5|AC007956.1|ENSG00000214670.3|Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein  	ENST00000356357.4|AREL1|ENSG00000119682.12|apoptosis resistant E3 ubiquitin protein ligase 1
hg19_v2_chr12_-_57505121_57505216	0.0634424	AUGGCUU	ENST00000538913.2|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000537215.2|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000454075.3|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000554825.1|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000553275.1|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced 	ENST00000300134.3|STAT6|ENSG00000166888.6|signal transducer and activator of transcription 6, interleukin-4 induced
hg19_v2_chr16_+_72042487_72042700	0.0632597	AUGGCUU	ENST00000572887.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000219240.4|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000574309.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000576145.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone)
hg19_v2_chr1_+_171454659_171454723	0.0631758	AUGGCUU	ENST00000367742.3|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C 	ENST00000338920.4|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C
hg19_v2_chr20_-_60640866_60640901	0.0630518	AUGGCUU	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr12_-_58027138_58027159	0.0626776	AUGGCUU	ENST00000341156.4|B4GALNT1|ENSG00000135454.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
hg19_v2_chr19_-_1863567_1863586	0.0623836	AUGGCUU	ENST00000250916.4|KLF16|ENSG00000129911.4|Kruppel-like factor 16
hg19_v2_chr11_-_1593150_1593150	0.0615272	AUGGCUU	ENST00000397374.3|DUSP8|ENSG00000184545.6|dual specificity phosphatase 8
hg19_v2_chr1_-_150208291_150208309	0.0610561	AUGGCUU	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr17_+_73512594_73512662	0.0609056	AUGGCUU	ENST00000333213.6|TSEN54|ENSG00000182173.8|TSEN54 tRNA splicing endonuclease subunit
hg19_v2_chr10_-_735553_735683	0.0608833	AUGGCUU	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr3_+_43328004_43328095	0.0605449	AUGGCUU	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr4_+_128703295_128703496	0.0601236	AUGGCUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr3_+_142442841_142443011	0.0600683	AUGGCUU	ENST00000476941.1|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1 	ENST00000273482.6|TRPC1|ENSG00000144935.10|transient receptor potential cation channel, subfamily C, member 1
hg19_v2_chr1_-_229478236_229478308	0.0597495	AUGGCUU	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr15_-_72410109_72410161	0.0588481	AUGGCUU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr11_+_19138670_19138732	0.0586885	AUGGCUU	ENST00000446113.2|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13 	ENST00000399351.3|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13
hg19_v2_chr3_-_135914615_135914701	0.058613	AUGGCUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr7_-_37956409_37956517	0.0579513	AUGGCUU	ENST00000436072.2|SFRP4|ENSG00000106483.7|secreted frizzled-related protein 4
hg19_v2_chr19_-_55628927_55628948	0.0579311	AUGGCUU	ENST00000263433.3|PPP1R12C|ENSG00000125503.8|protein phosphatase 1, regulatory subunit 12C 	ENST00000376393.2|PPP1R12C|ENSG00000125503.8|protein phosphatase 1, regulatory subunit 12C
hg19_v2_chr10_+_76871454_76871467	0.0566284	AUGGCUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr19_-_344786_344826	0.056598	AUGGCUU	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr12_+_57984965_57985059	0.0562114	AUGGCUU	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr2_+_108602971_108602995	0.0558276	AUGGCUU	ENST00000409059.1|SLC5A7|ENSG00000115665.4|solute carrier family 5 (sodium/choline cotransporter), member 7 	ENST00000540517.1|SLC5A7|ENSG00000115665.4|solute carrier family 5 (sodium/choline cotransporter), member 7 	ENST00000264047.2|SLC5A7|ENSG00000115665.4|solute carrier family 5 (sodium/choline cotransporter), member 7
hg19_v2_chr9_+_129376722_129376748	0.0555725	AUGGCUU	ENST00000526117.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000373474.4|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000355497.5|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000425646.2|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta 	ENST00000561065.1|LMX1B|ENSG00000136944.13|LIM homeobox transcription factor 1, beta
hg19_v2_chr2_+_155554797_155554837	0.0552732	AUGGCUU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chrX_+_41192595_41192651	0.055237	AUGGCUU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr9_+_101867359_101867376	0.0546832	AUGGCUU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr10_-_88281494_88281572	0.0539207	AUGGCUU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr14_+_103058948_103059005	0.0538109	AUGGCUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr3_+_111578027_111578080	0.0530932	AUGGCUU	ENST00000431670.2|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2 	ENST00000412622.1|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chr8_-_145559943_145559943	0.0526646	AUGGCUU	ENST00000332135.4|SCRT1|ENSG00000170616.9|scratch family zinc finger 1
hg19_v2_chr22_+_21771656_21771693	0.0526082	AUGGCUU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr13_+_42622781_42622889	0.0525759	AUGGCUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr17_-_66287257_66287276	0.051835	AUGGCUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr1_+_178694300_178694346	0.0513035	AUGGCUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr11_-_60929074_60929172	0.0512754	AUGGCUU	ENST00000301765.5|VPS37C|ENSG00000167987.6|vacuolar protein sorting 37 homolog C (S. cerevisiae)
hg19_v2_chr4_-_39033963_39034047	0.0508578	AUGGCUU	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr18_-_21166841_21166864	0.0508302	AUGGCUU	ENST00000269228.5|NPC1|ENSG00000141458.8|Niemann-Pick disease, type C1
hg19_v2_chr6_-_119670919_119670943	0.0507568	AUGGCUU	ENST00000368468.3|MAN1A1|ENSG00000111885.5|mannosidase, alpha, class 1A, member 1
hg19_v2_chr6_-_53409890_53409927	0.0506588	AUGGCUU	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr1_+_42846443_42846502	0.0504297	AUGGCUU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr2_-_64371546_64371588	0.0487149	AUGGCUU	ENST00000358912.4|PELI1|ENSG00000197329.7|pellino E3 ubiquitin protein ligase 1
hg19_v2_chr2_+_128848881_128848908	0.0483424	AUGGCUU	ENST00000259253.6|UGGT1|ENSG00000136731.8|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v2_chr19_+_1941117_1941200	0.048241	AUGGCUU	ENST00000255641.8|CSNK1G2|ENSG00000133275.11|casein kinase 1, gamma 2
hg19_v2_chr8_+_99129513_99129570	0.0481485	AUGGCUU	ENST00000522319.1|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 	ENST00000401707.2|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr2_+_241375069_241375136	0.0480855	AUGGCUU	ENST00000264039.2|GPC1|ENSG00000063660.4|glypican 1
hg19_v2_chr12_+_56211703_56211858	0.047524	AUGGCUU	ENST00000243045.5|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000552672.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000550836.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae)
hg19_v2_chr6_-_17706618_17706666	0.0473522	AUGGCUU	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr16_+_22019404_22019604	0.0472564	AUGGCUU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr14_-_81687197_81687280	0.0472061	AUGGCUU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr13_-_41240717_41240735	0.0472047	AUGGCUU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr15_+_32907691_32907772	0.0466357	AUGGCUU	ENST00000361627.3|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000567348.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000563864.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000543522.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A
hg19_v2_chr20_-_9819479_9819532	0.0441725	AUGGCUU	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr11_+_68228186_68228281	0.0440474	AUGGCUU	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr18_+_8717369_8717384	0.0435698	AUGGCUU	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr14_+_23775971_23776000	0.0434018	AUGGCUU	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr9_-_74980113_74980163	0.0433373	AUGGCUU	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr10_+_97515409_97515442	0.0426077	AUGGCUU	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr6_+_151815143_151815212	0.0422301	AUGGCUU	ENST00000239374.7|CCDC170|ENSG00000120262.8|coiled-coil domain containing 170 	ENST00000367290.5|CCDC170|ENSG00000120262.8|coiled-coil domain containing 170
hg19_v2_chr8_+_110552337_110552423	0.042147	AUGGCUU	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr5_+_109025067_109025146	0.0420685	AUGGCUU	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr4_-_149365827_149365870	0.0416399	AUGGCUU	ENST00000344721.4|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr10_+_120967072_120967101	0.0416045	AUGGCUU	ENST00000392870.2|GRK5|ENSG00000198873.10|G protein-coupled receptor kinase 5
hg19_v2_chr17_-_48785216_48785291	0.0408097	AUGGCUU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr4_-_87281224_87281375	0.040591	AUGGCUU	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr4_+_99182593_99182669	0.0401863	AUGGCUU	ENST00000508213.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408927.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000514122.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000453712.2|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000511212.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408900.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000339360.5|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1
hg19_v2_chr4_+_38665810_38665827	0.0394285	AUGGCUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr1_-_111682662_111682734	0.0393639	AUGGCUU	ENST00000286692.4|DRAM2|ENSG00000156171.10|DNA-damage regulated autophagy modulator 2
hg19_v2_chr10_+_114709999_114710031	0.0392257	AUGGCUU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr14_-_54908043_54908149	0.0390242	AUGGCUU	ENST00000556113.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000553660.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000395573.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000557690.1|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1 	ENST00000216416.4|CNIH1|ENSG00000100528.7|cornichon family AMPA receptor auxiliary protein 1
hg19_v2_chr17_+_79373540_79373540	0.0388337	AUGGCUU	ENST00000307745.7|RP11-1055B8.7|ENSG00000171282.9|BAH and coiled-coil domain-containing protein 1
hg19_v2_chr12_+_53774423_53774658	0.0386535	AUGGCUU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr2_-_153574480_153574552	0.0375136	AUGGCUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr8_-_143696833_143696833	0.0373655	AUGGCUU	ENST00000356613.2|ARC|ENSG00000198576.2|activity-regulated cytoskeleton-associated protein
hg19_v2_chr22_+_38004473_38004508	0.0369712	AUGGCUU	ENST00000414350.3|GGA1|ENSG00000100083.14|golgi-associated, gamma adaptin ear containing, ARF binding protein 1 	ENST00000343632.4|GGA1|ENSG00000100083.14|golgi-associated, gamma adaptin ear containing, ARF binding protein 1
hg19_v2_chr19_+_589893_589911	0.0368327	AUGGCUU	ENST00000251287.2|HCN2|ENSG00000099822.2|hyperpolarization activated cyclic nucleotide-gated potassium channel 2
hg19_v2_chr14_-_91526922_91527001	0.0367885	AUGGCUU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr1_+_20208870_20209006	0.03654	AUGGCUU	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr5_-_147162078_147162106	0.0362537	AUGGCUU	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr1_-_220445757_220445819	0.0358662	AUGGCUU	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr8_-_4852218_4852246	0.0356403	AUGGCUU	ENST00000400186.3|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1 	ENST00000602723.1|CSMD1|ENSG00000183117.13|CUB and Sushi multiple domains 1
hg19_v2_chr12_-_29534074_29534127	0.0354585	AUGGCUU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr12_+_108525517_108525531	0.0351493	AUGGCUU	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr18_+_59854480_59854551	0.0350243	AUGGCUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr18_+_9475668_9475698	0.0345907	AUGGCUU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chr12_+_27485823_27485868	0.0338698	AUGGCUU	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr14_-_23388338_23388393	0.0331993	AUGGCUU	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr9_-_93405352_93405386	0.0331853	AUGGCUU	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr15_-_48470558_48470714	0.0331779	AUGGCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr1_-_245027833_245027855	0.0330158	AUGGCUU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr7_-_140340576_140340622	0.0326369	AUGGCUU	ENST00000275884.6|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A 	ENST00000475837.1|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A
hg19_v2_chr16_-_47177874_47177922	0.0324177	AUGGCUU	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr11_+_64073699_64073918	0.0322927	AUGGCUU	ENST00000405666.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000468670.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha
hg19_v2_chr6_-_150185156_150185200	0.0318397	AUGGCUU	ENST00000239367.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11 	ENST00000367368.2|LRP11|ENSG00000120256.5|low density lipoprotein receptor-related protein 11
hg19_v2_chr17_-_46623441_46623441	0.0317153	AUGGCUU	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr20_-_17662878_17662940	0.0313549	AUGGCUU	ENST00000377813.1|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000377807.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000360807.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000398782.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr6_+_123317116_123317260	0.0312714	AUGGCUU	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr6_+_138483058_138483159	0.0311511	AUGGCUU	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr18_-_29522989_29523104	0.0304179	AUGGCUU	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr12_+_57916466_57916527	0.0300053	AUGGCUU	ENST00000355673.3|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr10_+_99185917_99185956	0.0298899	AUGGCUU	ENST00000334828.5|PGAM1|ENSG00000171314.8|phosphoglycerate mutase 1 (brain)
hg19_v2_chr10_+_93683519_93683594	0.0298348	AUGGCUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr14_-_94254821_94254836	0.0296823	AUGGCUU	ENST00000393140.1|PRIMA1|ENSG00000175785.8|proline rich membrane anchor 1
hg19_v2_chr5_-_160973649_160973713	0.0291719	AUGGCUU	ENST00000393959.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2 	ENST00000517547.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg19_v2_chr15_+_27111510_27111644	0.0290426	AUGGCUU	ENST00000335625.5|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr5_-_32313019_32313081	0.0283399	AUGGCUU	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chrX_+_152783131_152783151	0.0282945	AUGGCUU	ENST00000349466.2|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3 	ENST00000370186.1|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3
hg19_v2_chr1_+_15853308_15853413	0.0273651	AUGGCUU	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr5_+_72251793_72251825	0.0273013	AUGGCUU	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr17_-_27621125_27621143	0.0272288	AUGGCUU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr3_-_53381539_53381654	0.0270986	AUGGCUU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr6_+_24126350_24126497	0.0266563	AUGGCUU	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr4_+_57371509_57371509	0.02637	AUGGCUU	ENST00000360096.2|ARL9|ENSG00000196503.2|ADP-ribosylation factor-like 9
hg19_v2_chr18_-_51751132_51751158	0.0263293	AUGGCUU	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr12_+_52345448_52345532	0.0263201	AUGGCUU	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr1_+_2985760_2985775	0.0254074	AUGGCUU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr3_-_107809816_107809885	0.0246533	AUGGCUU	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr2_-_174830430_174830563	0.024634	AUGGCUU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr1_-_155990580_155990750	0.0244834	AUGGCUU	ENST00000531917.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000480567.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000526212.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000529008.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000496742.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000295702.4|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta)
hg19_v2_chr8_-_55014415_55014595	0.024282	AUGGCUU	ENST00000522007.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000521898.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000518546.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000316963.3|LYPLA1|ENSG00000120992.13|lysophospholipase I
hg19_v2_chr6_+_35182176_35182196	0.0242069	AUGGCUU	ENST00000394681.1|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3 	ENST00000274938.7|SCUBE3|ENSG00000146197.7|signal peptide, CUB domain, EGF-like 3
hg19_v2_chr21_+_38071430_38071456	0.0235184	AUGGCUU	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr11_+_120107344_120107351	0.0234916	AUGGCUU	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr7_-_26578407_26578451	0.023303	AUGGCUU	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chr22_-_42017021_42017100	0.0232793	AUGGCUU	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr20_+_49126881_49126936	0.0231793	AUGGCUU	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr7_-_86688990_86689026	0.0226636	AUGGCUU	ENST00000450689.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr1_-_201123586_201123637	0.0223983	AUGGCUU	ENST00000414605.2|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000367334.5|TMEM9|ENSG00000116857.12|transmembrane protein 9 	ENST00000367332.1|TMEM9|ENSG00000116857.12|transmembrane protein 9
hg19_v2_chr11_+_22214708_22214730	0.0223916	AUGGCUU	ENST00000324559.8|ANO5|ENSG00000171714.10|anoctamin 5
hg19_v2_chr14_+_56585048_56585150	0.0223376	AUGGCUU	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr19_-_17356697_17356762	0.021704	AUGGCUU	ENST00000291442.3|NR2F6|ENSG00000160113.5|nuclear receptor subfamily 2, group F, member 6
hg19_v2_chr1_-_93645818_93645918	0.0215413	AUGGCUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr8_+_58907104_58907131	0.0208039	AUGGCUU	ENST00000361488.3|FAM110B|ENSG00000169122.7|family with sequence similarity 110, member B
hg19_v2_chr1_-_243418344_243418356	0.0207557	AUGGCUU	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr4_-_16900217_16900230	0.0206936	AUGGCUU	ENST00000441778.2|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr17_+_38474489_38474548	0.0205745	AUGGCUU	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr1_+_6673745_6673830	0.020434	AUGGCUU	ENST00000377648.4|PHF13|ENSG00000116273.5|PHD finger protein 13
hg19_v2_chr15_-_33360085_33360256	0.0197392	AUGGCUU	ENST00000334528.9|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr7_-_558876_559046	0.0197147	AUGGCUU	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr4_+_170541660_170541677	0.0192225	AUGGCUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr16_+_28962128_28962335	0.0191954	AUGGCUU	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr7_+_6144514_6144614	0.0186135	AUGGCUU	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr7_-_117513540_117513587	0.0182365	AUGGCUU	ENST00000160373.3|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr1_+_161228517_161228542	0.0182035	AUGGCUU	ENST00000504449.1|PCP4L1|ENSG00000248485.1|Purkinje cell protein 4 like 1
hg19_v2_chr8_+_28747884_28747938	0.0180849	AUGGCUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr19_-_12834739_12834825	0.0180162	AUGGCUU	ENST00000589337.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000425528.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000441499.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000588216.1|TNPO2|ENSG00000105576.11|transportin 2
hg19_v2_chr12_+_58138800_58138860	0.0179031	AUGGCUU	ENST00000547992.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000552816.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000547472.1|TSPAN31|ENSG00000135452.5|tetraspanin 31
hg19_v2_chr14_+_69865401_69865426	0.0166512	AUGGCUU	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chrX_-_53449593_53449677	0.0166487	AUGGCUU	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr3_+_30648066_30648167	0.0165725	AUGGCUU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr2_+_10861775_10861786	0.0163632	AUGGCUU	ENST00000272238.4|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 	ENST00000381661.3|ATP6V1C2|ENSG00000143882.5|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
hg19_v2_chr5_+_43121698_43121786	0.016313	AUGGCUU	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr2_-_64881018_64881064	0.0162013	AUGGCUU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr12_+_13349650_13349667	0.0157586	AUGGCUU	ENST00000256951.5|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000431267.2|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000542474.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000544053.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1
hg19_v2_chr10_+_112257596_112257634	0.0154333	AUGGCUU	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chr17_+_72983674_72983768	0.0150056	AUGGCUU	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr4_+_113218497_113218567	0.0149122	AUGGCUU	ENST00000458497.1|ALPK1|ENSG00000073331.13|alpha-kinase 1 	ENST00000177648.9|ALPK1|ENSG00000073331.13|alpha-kinase 1 	ENST00000504176.2|ALPK1|ENSG00000073331.13|alpha-kinase 1
hg19_v2_chr1_-_166845515_166845564	0.0148648	AUGGCUU	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr11_-_106889250_106889264	0.0146186	AUGGCUU	ENST00000526355.2|GUCY1A2|ENSG00000152402.6|guanylate cyclase 1, soluble, alpha 2
hg19_v2_chr11_+_125496124_125496344	0.0143288	AUGGCUU	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr6_-_94129244_94129284	0.0136108	AUGGCUU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr13_-_50367057_50367142	0.0134663	AUGGCUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr11_-_108093329_108093375	0.0133797	AUGGCUU	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr1_-_154842741_154842772	0.013132	AUGGCUU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr8_+_21777159_21777221	0.0129549	AUGGCUU	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr16_-_23160591_23160787	0.0128813	AUGGCUU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr22_+_31608219_31608303	0.012866	AUGGCUU	ENST00000406516.1|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000444929.2|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000331728.4|LIMK2|ENSG00000182541.13|LIM domain kinase 2
hg19_v2_chr12_-_56652111_56652183	0.0127011	AUGGCUU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr12_+_105501487_105501562	0.0120259	AUGGCUU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr9_-_32552551_32552576	0.0118147	AUGGCUU	ENST00000360538.2|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase 	ENST00000379858.1|TOPORS|ENSG00000197579.3|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg19_v2_chr17_+_59529743_59529798	0.0117553	AUGGCUU	ENST00000589003.1|TBX4|ENSG00000121075.5|T-box 4 	ENST00000393853.4|TBX4|ENSG00000121075.5|T-box 4
hg19_v2_chr1_+_171810606_171810649	0.0116089	AUGGCUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr12_-_111021110_111021142	0.0113256	AUGGCUU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr5_+_53813536_53813613	0.0112639	AUGGCUU	ENST00000343017.6|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000381410.4|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000326277.3|SNX18|ENSG00000178996.8|sorting nexin 18
hg19_v2_chr5_+_75378997_75379080	0.011082	AUGGCUU	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr6_+_125283566_125283691	0.0110384	AUGGCUU	ENST00000521654.2|RNF217|ENSG00000146373.12|ring finger protein 217
hg19_v2_chr3_+_197687071_197687128	0.0107247	AUGGCUU	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr3_-_143567262_143567373	0.0107057	AUGGCUU	ENST00000474151.1|SLC9A9|ENSG00000181804.10|solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 	ENST00000316549.6|SLC9A9|ENSG00000181804.10|solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
hg19_v2_chr6_-_108145499_108145532	0.0103663	AUGGCUU	ENST00000369020.3|SCML4|ENSG00000146285.9|sex comb on midleg-like 4 (Drosophila) 	ENST00000369022.2|SCML4|ENSG00000146285.9|sex comb on midleg-like 4 (Drosophila)
hg19_v2_chr17_+_29421900_29421951	0.0103153	AUGGCUU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr20_+_47538357_47538427	0.010312	AUGGCUU	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr14_+_35591735_35591834	0.0102963	AUGGCUU	ENST00000604948.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000605201.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000250377.7|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000321130.10|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000534898.4|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr7_-_20826504_20826526	0.00995617	AUGGCUU	ENST00000418710.2|SP8|ENSG00000164651.12|Sp8 transcription factor 	ENST00000361443.4|SP8|ENSG00000164651.12|Sp8 transcription factor
hg19_v2_chr8_-_27115903_27115927	0.00964109	AUGGCUU	ENST00000350889.4|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519997.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519614.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000522908.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000265770.7|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr17_-_80606304_80606411	0.0093863	AUGGCUU	ENST00000392325.4|WDR45B|ENSG00000141580.11|WD repeat domain 45B
hg19_v2_chr10_+_105253661_105253736	0.00924246	AUGGCUU	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr12_+_112451120_112451203	0.00922015	AUGGCUU	ENST00000261735.3|ERP29|ENSG00000089248.6|endoplasmic reticulum protein 29 	ENST00000455836.1|ERP29|ENSG00000089248.6|endoplasmic reticulum protein 29
hg19_v2_chr11_-_22647350_22647396	0.00861377	AUGGCUU	ENST00000327470.3|FANCF|ENSG00000183161.3|Fanconi anemia, complementation group F
hg19_v2_chr14_+_99947715_99947791	0.00839451	AUGGCUU	ENST00000389879.5|CCNK|ENSG00000090061.13|cyclin K 	ENST00000557441.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555049.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555842.1|CCNK|ENSG00000090061.13|cyclin K
hg19_v2_chr6_+_10556215_10556240	0.00830901	AUGGCUU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr1_+_224544552_224544570	0.00790557	AUGGCUU	ENST00000465271.1|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4 	ENST00000366858.3|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4
hg19_v2_chr11_-_13484713_13484850	0.00784891	AUGGCUU	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr15_+_72766651_72766680	0.00759825	AUGGCUU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr14_+_67826709_67826751	0.00746542	AUGGCUU	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr6_+_36562132_36562154	0.00732192	AUGGCUU	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr3_+_28283069_28283168	0.00726732	AUGGCUU	ENST00000466830.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1 	ENST00000423894.1|CMC1|ENSG00000187118.8|C-x(9)-C motif containing 1
hg19_v2_chr19_+_30433110_30433214	0.00726216	AUGGCUU	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr21_-_32931290_32931341	0.00726175	AUGGCUU	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr10_-_99052382_99052413	0.00725229	AUGGCUU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr19_-_17799008_17799122	0.00713937	AUGGCUU	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
hg19_v2_chr13_-_110438914_110438937	0.0069116	AUGGCUU	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr20_+_57766075_57766075	0.00676894	AUGGCUU	ENST00000371030.2|ZNF831|ENSG00000124203.5|zinc finger protein 831
hg19_v2_chr3_-_24536253_24536328	0.00670724	AUGGCUU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr2_-_201936302_201936416	0.00629296	AUGGCUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr17_-_60142609_60142657	0.00622936	AUGGCUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr20_-_52210368_52210384	0.00617055	AUGGCUU	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr12_-_498620_498693	0.00594094	AUGGCUU	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr6_+_88182643_88182722	0.00539314	AUGGCUU	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr6_-_7313381_7313458	0.0052809	AUGGCUU	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chr10_+_64564469_64564535	0.00524297	AUGGCUU	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr8_-_6420930_6420957	0.00495334	AUGGCUU	ENST00000325203.5|ANGPT2|ENSG00000091879.9|angiopoietin 2
hg19_v2_chr17_-_37607497_37607539	0.00479341	AUGGCUU	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr18_+_29671812_29671892	0.0047197	AUGGCUU	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr1_-_244013384_244013430	0.00470309	AUGGCUU	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr10_+_17794251_17794260	0.00444504	AUGGCUU	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr9_-_19786926_19786926	0.0043313	AUGGCUU	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr12_+_96588143_96588185	0.00430805	AUGGCUU	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr8_-_81787006_81787031	0.00411665	AUGGCUU	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr2_+_68694678_68694734	0.00371845	AUGGCUU	ENST00000303795.4|APLF|ENSG00000169621.5|aprataxin and PNKP like factor
hg19_v2_chr3_+_159943362_159943423	0.0036808	AUGGCUU	ENST00000326474.3|C3orf80|ENSG00000180044.3|chromosome 3 open reading frame 80
hg19_v2_chrX_+_95939711_95939786	0.00367866	AUGGCUU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr3_+_122283064_122283091	0.0033404	AUGGCUU	ENST00000296161.4|DTX3L|ENSG00000163840.5|deltex 3-like (Drosophila)
hg19_v2_chrX_+_154997474_154997474	0.00330411	AUGGCUU	ENST00000302805.2|SPRY3|ENSG00000168939.6|sprouty homolog 3 (Drosophila)
hg19_v2_chr1_-_71546690_71546730	0.00313357	AUGGCUU	ENST00000254821.6|ZRANB2|ENSG00000132485.8|zinc finger, RAN-binding domain containing 2
hg19_v2_chr5_-_131132658_131132719	0.00307504	AUGGCUU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr17_+_57970469_57970600	0.00301935	AUGGCUU	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr6_+_134274322_134274342	0.00280909	AUGGCUU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr11_+_66036004_66036079	0.00278748	AUGGCUU	ENST00000311481.6|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family 	ENST00000527397.1|RAB1B|ENSG00000174903.10|RAB1B, member RAS oncogene family
hg19_v2_chr4_-_47916613_47916640	0.00255631	AUGGCUU	ENST00000381538.3|NFXL1|ENSG00000170448.7|nuclear transcription factor, X-box binding-like 1 	ENST00000329043.3|NFXL1|ENSG00000170448.7|nuclear transcription factor, X-box binding-like 1
hg19_v2_chr3_+_107241783_107241850	0.00249405	AUGGCUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr6_-_16761678_16761721	0.00248625	AUGGCUU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr17_+_75136980_75137028	0.00245414	AUGGCUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr10_+_18041218_18041227	0.00233122	AUGGCUU	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr8_-_62627057_62627159	0.00211147	AUGGCUU	ENST00000519234.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379449.6|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379454.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518068.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517856.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000356457.5|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr11_+_13299186_13299432	0.00208637	AUGGCUU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr17_+_57297807_57297923	0.00204573	AUGGCUU	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr22_-_22307199_22307242	0.00175047	AUGGCUU	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr17_-_9929581_9929626	0.00173806	AUGGCUU	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr7_+_16685756_16685820	0.00168223	AUGGCUU	ENST00000415365.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000258761.3|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000433922.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000452975.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000405202.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr20_+_42875887_42875921	0.0015586	AUGGCUU	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
hg19_v2_chr16_+_71879861_71879927	0.00154274	AUGGCUU	ENST00000427980.2|ATXN1L|ENSG00000224470.3|ataxin 1-like 	ENST00000568581.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr8_-_142011316_142011400	0.00148217	AUGGCUU	ENST00000522684.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000395218.2|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000524357.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000521332.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000524040.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519881.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000520045.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr1_-_40137710_40137824	0.00138637	AUGGCUU	ENST00000235628.1|NT5C1A|ENSG00000116981.3|5'-nucleotidase, cytosolic IA
hg19_v2_chr11_+_9482512_9482534	0.0010986	AUGGCUU	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr7_-_27213893_27213954	0.00076352	AUGGCUU	ENST00000283921.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr11_+_62475130_62475195	0.000731242	AUGGCUU	ENST00000294117.5|GNG3|ENSG00000162188.5|guanine nucleotide binding protein (G protein), gamma 3
hg19_v2_chr3_-_48130707_48130789	0.000586091	AUGGCUU	ENST00000360240.6|MAP4|ENSG00000047849.17|microtubule-associated protein 4 	ENST00000383737.4|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr2_-_175351744_175351828	0.000585104	AUGGCUU	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr9_+_5629025_5629119	0.000569354	AUGGCUU	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr8_-_18871159_18871201	0.000408826	AUGGCUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr3_+_169684553_169684616	0.000341641	AUGGCUU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr21_-_40685477_40685496	0.000148989	AUGGCUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr12_+_64845660_64845702	0.000123704	AUGGCUU	ENST00000331710.5|TBK1|ENSG00000183735.5|TANK-binding kinase 1
hg19_v2_chr8_-_23315190_23315235	3.85503e-06	AUGGCUU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
