hg19_v2_chr6_-_136871957_136872006	0.848571	BHLHE40	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr1_+_35247859_35247901	0.764362	BHLHE40	ENST00000373362.3|GJB3|ENSG00000188910.7|gap junction protein, beta 3, 31kDa
hg19_v2_chr17_-_17109579_17109683	0.657343	BHLHE40	ENST00000321560.3|PLD6|ENSG00000179598.5|phospholipase D family, member 6
hg19_v2_chr7_+_147830776_147830834	0.556112	BHLHE40	ENST00000538075.1|CNTNAP2|ENSG00000174469.13|contactin associated protein-like 2
hg19_v2_chr8_+_32405785_32405803	0.526623	BHLHE40	ENST00000287842.3|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr8_+_32405728_32405749	0.508571	BHLHE40	ENST00000523079.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000338921.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000356819.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000287845.5|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000341377.5|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr10_-_6019552_6019585	0.370735	BHLHE40	ENST00000379977.3|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000397251.3|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000397248.2|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha
hg19_v2_chr19_-_16045665_16045708	0.35319	BHLHE40	ENST00000248041.8|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr19_-_16045619_16045649	0.349292	BHLHE40	ENST00000402119.4|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr12_-_48298785_48298828	0.338936	BHLHE40	ENST00000550325.1|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor 	ENST00000546653.1|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor 	ENST00000549336.1|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor 	ENST00000535672.1|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor 	ENST00000229022.3|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor 	ENST00000548664.1|VDR|ENSG00000111424.6|vitamin D (1,25- dihydroxyvitamin D3) receptor
hg19_v2_chr9_+_706842_706889	0.326792	BHLHE40	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr12_-_25101920_25102077	0.32494	BHLHE40	ENST00000539780.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic 	ENST00000546285.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic 	ENST00000342945.5|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr5_+_89770664_89770688	0.319407	BHLHE40	ENST00000503973.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000399107.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr5_+_89770696_89770727	0.297969	BHLHE40	ENST00000504930.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000514483.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr11_+_60609537_60609567	0.297577	BHLHE40	ENST00000227520.5|CCDC86|ENSG00000110104.7|coiled-coil domain containing 86
hg19_v2_chr19_-_55652290_55652335	0.286058	BHLHE40	ENST00000589745.1|TNNT1|ENSG00000105048.12|troponin T type 1 (skeletal, slow)
hg19_v2_chr8_-_72459885_72459896	0.272416	BHLHE40	ENST00000523987.1|RP11-1102P16.1|ENSG00000253379.1|Uncharacterized protein
hg19_v2_chr8_+_99129513_99129570	0.263492	BHLHE40	ENST00000522319.1|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 	ENST00000401707.2|POP1|ENSG00000104356.6|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr9_-_117111222_117111258	0.234444	BHLHE40	ENST00000374079.4|AKNA|ENSG00000106948.12|AT-hook transcription factor
hg19_v2_chr1_+_210001309_210001411	0.230253	BHLHE40	ENST00000491415.2|DIEXF|ENSG00000117597.13|digestive organ expansion factor homolog (zebrafish)
hg19_v2_chr5_+_149737202_149737346	0.220157	BHLHE40	ENST00000451292.1|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000377797.3|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000445265.2|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000323668.7|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000439160.2|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000394269.3|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000427724.2|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000504761.2|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000513346.1|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1 	ENST00000515516.1|TCOF1|ENSG00000070814.13|Treacher Collins-Franceschetti syndrome 1
hg19_v2_chr14_+_77924373_77924451	0.21779	BHLHE40	ENST00000216479.3|AHSA1|ENSG00000100591.3|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) 	ENST00000535854.2|AHSA1|ENSG00000100591.3|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) 	ENST00000555517.1|AHSA1|ENSG00000100591.3|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
hg19_v2_chr2_-_136743169_136743254	0.214824	BHLHE40	ENST00000264161.4|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chr14_-_102026643_102026775	0.212373	BHLHE40	ENST00000555882.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554441.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000553729.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557109.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557532.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554694.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000554735.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000555174.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head) 	ENST00000557661.1|DIO3OS|ENSG00000258498.2|DIO3 opposite strand/antisense RNA (head to head)
hg19_v2_chr12_-_25102252_25102393	0.209241	BHLHE40	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr12_-_6677422_6677495	0.197637	BHLHE40	ENST00000382421.3|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000545200.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000399466.2|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000536124.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000540228.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000542867.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000545492.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000322166.5|NOP2|ENSG00000111641.6|NOP2 nucleolar protein 	ENST00000545915.1|NOP2|ENSG00000111641.6|NOP2 nucleolar protein
hg19_v2_chr1_+_9648921_9648982	0.196385	BHLHE40	ENST00000377376.4|TMEM201|ENSG00000188807.8|transmembrane protein 201 	ENST00000340305.5|TMEM201|ENSG00000188807.8|transmembrane protein 201 	ENST00000340381.6|TMEM201|ENSG00000188807.8|transmembrane protein 201
hg19_v2_chr1_+_173793777_173793829	0.19336	BHLHE40	ENST00000239457.5|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr19_+_35645618_35645690	0.190065	BHLHE40	ENST00000392218.2|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000543307.1|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000392219.2|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000541435.2|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000590686.1|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000342879.3|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5 	ENST00000588699.1|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5
hg19_v2_chr2_-_136743039_136743067	0.187439	BHLHE40	ENST00000537273.1|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chrX_+_54556633_54556732	0.184538	BHLHE40	ENST00000336470.4|GNL3L|ENSG00000130119.11|guanine nucleotide binding protein-like 3 (nucleolar)-like 	ENST00000360845.2|GNL3L|ENSG00000130119.11|guanine nucleotide binding protein-like 3 (nucleolar)-like
hg19_v2_chr9_+_130565147_130565214	0.177026	BHLHE40	ENST00000373247.2|FPGS|ENSG00000136877.10|folylpolyglutamate synthase 	ENST00000373245.1|FPGS|ENSG00000136877.10|folylpolyglutamate synthase 	ENST00000393706.2|FPGS|ENSG00000136877.10|folylpolyglutamate synthase 	ENST00000373228.1|FPGS|ENSG00000136877.10|folylpolyglutamate synthase
hg19_v2_chr1_-_43637915_43637998	0.173204	BHLHE40	ENST00000236051.2|EBNA1BP2|ENSG00000117395.6|EBNA1 binding protein 2
hg19_v2_chr7_-_37024665_37024688	0.16238	BHLHE40	ENST00000396040.2|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr2_+_207630081_207630347	0.159569	BHLHE40	ENST00000236980.6|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000418289.1|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000402774.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000403094.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2
hg19_v2_chr6_+_144164455_144164564	0.158796	BHLHE40	ENST00000367576.5|LTV1|ENSG00000135521.8|LTV1 homolog (S. cerevisiae)
hg19_v2_chr17_+_33307503_33307598	0.155617	BHLHE40	ENST00000378526.4|LIG3|ENSG00000005156.7|ligase III, DNA, ATP-dependent 	ENST00000585941.1|LIG3|ENSG00000005156.7|ligase III, DNA, ATP-dependent 	ENST00000262327.5|LIG3|ENSG00000005156.7|ligase III, DNA, ATP-dependent 	ENST00000592690.1|LIG3|ENSG00000005156.7|ligase III, DNA, ATP-dependent 	ENST00000585740.1|LIG3|ENSG00000005156.7|ligase III, DNA, ATP-dependent
hg19_v2_chr14_+_73393040_73393218	0.151647	BHLHE40	ENST00000358377.2|DCAF4|ENSG00000119599.12|DDB1 and CUL4 associated factor 4 	ENST00000353777.3|DCAF4|ENSG00000119599.12|DDB1 and CUL4 associated factor 4 	ENST00000394234.2|DCAF4|ENSG00000119599.12|DDB1 and CUL4 associated factor 4 	ENST00000509153.1|DCAF4|ENSG00000119599.12|DDB1 and CUL4 associated factor 4 	ENST00000555042.1|DCAF4|ENSG00000119599.12|DDB1 and CUL4 associated factor 4
hg19_v2_chr1_-_43638168_43638241	0.151181	BHLHE40	ENST00000431635.2|EBNA1BP2|ENSG00000117395.6|EBNA1 binding protein 2
hg19_v2_chr2_+_103236004_103236166	0.15113	BHLHE40	ENST00000233969.2|SLC9A2|ENSG00000115616.2|solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
hg19_v2_chr1_-_200589859_200589887	0.14755	BHLHE40	ENST00000367350.4|KIF14|ENSG00000118193.7|kinesin family member 14
hg19_v2_chrX_+_129040122_129040174	0.146843	BHLHE40	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr10_-_6019455_6019494	0.145677	BHLHE40	ENST00000530685.1|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000397255.3|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000379971.1|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000528354.1|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000397250.2|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha 	ENST00000429135.2|IL15RA|ENSG00000134470.15|interleukin 15 receptor, alpha
hg19_v2_chr1_-_113498943_113498980	0.141823	BHLHE40	ENST00000369626.3|SLC16A1|ENSG00000155380.7|solute carrier family 16 (monocarboxylate transporter), member 1
hg19_v2_chr12_-_55042140_55042277	0.138776	BHLHE40	ENST00000293371.6|DCD|ENSG00000161634.7|dermcidin 	ENST00000456047.2|DCD|ENSG00000161634.7|dermcidin
hg19_v2_chr17_-_13505219_13505299	0.137197	BHLHE40	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chr2_-_112642267_112642267	0.133424	BHLHE40	ENST00000341068.3|ANAPC1|ENSG00000153107.7|anaphase promoting complex subunit 1
hg19_v2_chr21_+_33784670_33784696	0.130187	BHLHE40	ENST00000300255.2|EVA1C|ENSG00000166979.8|eva-1 homolog C (C. elegans)
hg19_v2_chr8_+_109455845_109455889	0.128989	BHLHE40	ENST00000220853.3|EMC2|ENSG00000104412.3|ER membrane protein complex subunit 2
hg19_v2_chr15_+_68924327_68924411	0.127958	BHLHE40	ENST00000543950.1|CORO2B|ENSG00000103647.8|coronin, actin binding protein, 2B
hg19_v2_chr13_-_99630233_99630348	0.127266	BHLHE40	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chrX_+_129040094_129040112	0.126608	BHLHE40	ENST00000425117.2|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr6_-_154677900_154677944	0.126039	BHLHE40	ENST00000265198.4|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1 	ENST00000520261.1|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1
hg19_v2_chr19_+_35645817_35645872	0.12581	BHLHE40	ENST00000423817.3|FXYD5|ENSG00000089327.10|FXYD domain containing ion transport regulator 5
hg19_v2_chr1_-_112046289_112046382	0.125237	BHLHE40	ENST00000241356.4|ADORA3|ENSG00000121933.13|adenosine A3 receptor
hg19_v2_chr4_+_47487285_47487366	0.123905	BHLHE40	ENST00000273859.3|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D 	ENST00000504445.1|ATP10D|ENSG00000145246.9|ATPase, class V, type 10D
hg19_v2_chr5_-_101834617_101834710	0.120903	BHLHE40	ENST00000513675.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000379807.3|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1
hg19_v2_chr15_-_74988281_74988392	0.116547	BHLHE40	ENST00000566828.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000563009.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000568176.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566243.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566219.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000426797.3|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566119.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000315127.4|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3
hg19_v2_chr19_+_7660716_7660802	0.116337	BHLHE40	ENST00000160298.4|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3 	ENST00000446248.2|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3
hg19_v2_chr11_+_34664014_34664174	0.116217	BHLHE40	ENST00000527935.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr8_-_11710979_11711035	0.115456	BHLHE40	ENST00000415599.2|CTSB|ENSG00000164733.16|cathepsin B
hg19_v2_chr19_-_5719860_5719905	0.115031	BHLHE40	ENST00000590729.1|LONP1|ENSG00000196365.7|lon peptidase 1, mitochondrial
hg19_v2_chr12_-_58165870_58165911	0.114852	BHLHE40	ENST00000257848.7|METTL1|ENSG00000037897.12|methyltransferase like 1
hg19_v2_chr8_-_134584092_134584143	0.113905	BHLHE40	ENST00000522652.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr1_-_207095324_207095357	0.108723	BHLHE40	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr8_-_48872686_48872743	0.108206	BHLHE40	ENST00000314191.2|PRKDC|ENSG00000253729.3|protein kinase, DNA-activated, catalytic polypeptide 	ENST00000338368.3|PRKDC|ENSG00000253729.3|protein kinase, DNA-activated, catalytic polypeptide
hg19_v2_chr22_-_30987849_30987927	0.106917	BHLHE40	ENST00000402284.3|PES1|ENSG00000100029.13|pescadillo ribosomal biogenesis factor 1 	ENST00000354694.7|PES1|ENSG00000100029.13|pescadillo ribosomal biogenesis factor 1
hg19_v2_chr22_-_30987837_30987848	0.101962	BHLHE40	ENST00000335214.6|PES1|ENSG00000100029.13|pescadillo ribosomal biogenesis factor 1
hg19_v2_chr4_-_57301748_57301791	0.101608	BHLHE40	ENST00000264220.2|PPAT|ENSG00000128059.4|phosphoribosyl pyrophosphate amidotransferase
hg19_v2_chr1_+_207070775_207070797	0.0989261	BHLHE40	ENST00000391929.3|IL24|ENSG00000162892.11|interleukin 24 	ENST00000294984.2|IL24|ENSG00000162892.11|interleukin 24 	ENST00000367093.3|IL24|ENSG00000162892.11|interleukin 24
hg19_v2_chr8_+_22857048_22857092	0.0985455	BHLHE40	ENST00000251822.6|RHOBTB2|ENSG00000008853.12|Rho-related BTB domain containing 2
hg19_v2_chr7_-_138720763_138720823	0.0980668	BHLHE40	ENST00000275766.1|ZC3HAV1L|ENSG00000146858.7|zinc finger CCCH-type, antiviral 1-like
hg19_v2_chr18_+_580367_580403	0.0969099	BHLHE40	ENST00000327228.3|CETN1|ENSG00000177143.3|centrin, EF-hand protein, 1
hg19_v2_chr2_+_183989157_183989179	0.0967498	BHLHE40	ENST00000541912.1|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr1_-_171621815_171621835	0.0955363	BHLHE40	ENST00000037502.6|MYOC|ENSG00000034971.10|myocilin, trabecular meshwork inducible glucocorticoid response
hg19_v2_chr5_-_101834712_101834736	0.0947662	BHLHE40	ENST00000506729.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000389019.3|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000379810.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1
hg19_v2_chr2_+_183989083_183989151	0.0930404	BHLHE40	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr1_+_118472343_118472418	0.0908205	BHLHE40	ENST00000369441.3|WDR3|ENSG00000065183.11|WD repeat domain 3 	ENST00000349139.5|WDR3|ENSG00000065183.11|WD repeat domain 3
hg19_v2_chr14_+_22694606_22694646	0.089318	BHLHE40	ENST00000390463.3|TRAV36DV7|ENSG00000211815.3|T cell receptor alpha variable 36/delta variable 7
hg19_v2_chr19_-_3786253_3786322	0.0866782	BHLHE40	ENST00000585778.1|MATK|ENSG00000007264.9|megakaryocyte-associated tyrosine kinase
hg19_v2_chr12_-_113772835_113772954	0.08531	BHLHE40	ENST00000552014.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000548186.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000202831.3|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000549181.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
hg19_v2_chr19_-_45909585_45909625	0.0852769	BHLHE40	ENST00000593226.1|PPP1R13L|ENSG00000104881.10|protein phosphatase 1, regulatory subunit 13 like 	ENST00000418234.2|PPP1R13L|ENSG00000104881.10|protein phosphatase 1, regulatory subunit 13 like
hg19_v2_chr17_-_74733404_74733456	0.0756309	BHLHE40	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr3_+_63638339_63638365	0.0753861	BHLHE40	ENST00000343837.3|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein 	ENST00000469440.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chr21_+_27107672_27107698	0.0752114	BHLHE40	ENST00000400075.3|GABPA|ENSG00000154727.6|GA binding protein transcription factor, alpha subunit 60kDa
hg19_v2_chr3_-_98312548_98312567	0.0736195	BHLHE40	ENST00000264193.2|CPOX|ENSG00000080819.2|coproporphyrinogen oxidase
hg19_v2_chr1_-_165325939_165325958	0.0734504	BHLHE40	ENST00000342310.3|LMX1A|ENSG00000162761.10|LIM homeobox transcription factor 1, alpha
hg19_v2_chr6_-_109804412_109804458	0.0723078	BHLHE40	ENST00000230122.3|ZBTB24|ENSG00000112365.4|zinc finger and BTB domain containing 24
hg19_v2_chr14_-_45722605_45722691	0.0707917	BHLHE40	ENST00000310806.4|MIS18BP1|ENSG00000129534.9|MIS18 binding protein 1
hg19_v2_chr5_+_36152091_36152114	0.0681487	BHLHE40	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr1_+_12079517_12079595	0.0678011	BHLHE40	ENST00000235332.4|MIIP|ENSG00000116691.6|migration and invasion inhibitory protein 	ENST00000436478.2|MIIP|ENSG00000116691.6|migration and invasion inhibitory protein
hg19_v2_chr6_+_5261225_5261277	0.0654897	BHLHE40	ENST00000324331.6|FARS2|ENSG00000145982.7|phenylalanyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr17_-_61850894_61851135	0.0647933	BHLHE40	ENST00000403162.3|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000582252.1|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000225726.5|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47
hg19_v2_chr17_-_10600818_10600885	0.0643389	BHLHE40	ENST00000577427.1|SCO1|ENSG00000133028.6|SCO1 cytochrome c oxidase assembly protein 	ENST00000255390.5|SCO1|ENSG00000133028.6|SCO1 cytochrome c oxidase assembly protein
hg19_v2_chr6_+_31865552_31865575	0.0642276	BHLHE40	ENST00000469372.1|C2|ENSG00000166278.10|complement component 2 	ENST00000497706.1|C2|ENSG00000166278.10|complement component 2
hg19_v2_chr15_-_23692381_23692392	0.0636631	BHLHE40	ENST00000567107.1|GOLGA6L2|ENSG00000174450.7|golgin A6 family-like 2 	ENST00000345070.5|GOLGA6L2|ENSG00000174450.7|golgin A6 family-like 2 	ENST00000312015.5|GOLGA6L2|ENSG00000174450.7|golgin A6 family-like 2
hg19_v2_chr22_-_38245304_38245354	0.0625367	BHLHE40	ENST00000609454.1|ANKRD54|ENSG00000100124.8|ankyrin repeat domain 54
hg19_v2_chrX_-_128977364_128977436	0.0609991	BHLHE40	ENST00000371064.3|ZDHHC9|ENSG00000188706.8|zinc finger, DHHC-type containing 9
hg19_v2_chr17_+_72772621_72772676	0.0586535	BHLHE40	ENST00000335464.5|TMEM104|ENSG00000109066.9|transmembrane protein 104 	ENST00000417024.2|TMEM104|ENSG00000109066.9|transmembrane protein 104 	ENST00000578764.1|TMEM104|ENSG00000109066.9|transmembrane protein 104 	ENST00000582773.1|TMEM104|ENSG00000109066.9|transmembrane protein 104 	ENST00000582330.1|TMEM104|ENSG00000109066.9|transmembrane protein 104
hg19_v2_chr8_+_125985531_125985571	0.0582373	BHLHE40	ENST00000319286.5|ZNF572|ENSG00000180938.5|zinc finger protein 572
hg19_v2_chr4_+_57302297_57302322	0.0562512	BHLHE40	ENST00000399688.3|PAICS|ENSG00000128050.4|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 	ENST00000512576.1|PAICS|ENSG00000128050.4|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
hg19_v2_chr4_+_57301896_57301945	0.0559144	BHLHE40	ENST00000514888.1|PAICS|ENSG00000128050.4|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 	ENST00000264221.2|PAICS|ENSG00000128050.4|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 	ENST00000505164.1|PAICS|ENSG00000128050.4|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
hg19_v2_chr4_-_85418103_85418103	0.0555854	BHLHE40	ENST00000515820.2|NKX6-1|ENSG00000163623.5|NK6 homeobox 1
hg19_v2_chr5_-_89770582_89770603	0.0552689	BHLHE40	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr10_+_101491968_101492153	0.0546872	BHLHE40	ENST00000370476.5|CUTC|ENSG00000119929.8|cutC copper transporter 	ENST00000370472.4|CUTC|ENSG00000119929.8|cutC copper transporter
hg19_v2_chrX_-_128977781_128977869	0.0539839	BHLHE40	ENST00000357166.6|ZDHHC9|ENSG00000188706.8|zinc finger, DHHC-type containing 9
hg19_v2_chr22_-_50523760_50523787	0.0533126	BHLHE40	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr6_+_44215603_44215666	0.0532515	BHLHE40	ENST00000371554.1|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr7_-_151574191_151574215	0.0529962	BHLHE40	ENST00000287878.4|PRKAG2|ENSG00000106617.9|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
hg19_v2_chr21_+_38071430_38071456	0.0526827	BHLHE40	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr9_-_95640218_95640345	0.051684	BHLHE40	ENST00000395506.3|ZNF484|ENSG00000127081.9|zinc finger protein 484 	ENST00000375495.3|ZNF484|ENSG00000127081.9|zinc finger protein 484 	ENST00000332591.6|ZNF484|ENSG00000127081.9|zinc finger protein 484
hg19_v2_chr7_+_2671568_2671606	0.0507	BHLHE40	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr5_+_36152163_36152174	0.0447602	BHLHE40	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr7_-_155326532_155326573	0.0445415	BHLHE40	ENST00000406197.1|CNPY1|ENSG00000146910.7|canopy FGF signaling regulator 1 	ENST00000321736.5|CNPY1|ENSG00000146910.7|canopy FGF signaling regulator 1
hg19_v2_chr10_-_35379241_35379294	0.0442195	BHLHE40	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr6_+_13615554_13615601	0.0414458	BHLHE40	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr19_+_13106383_13106423	0.0388117	BHLHE40	ENST00000397661.2|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr12_+_93861282_93861300	0.0379759	BHLHE40	ENST00000552217.1|MRPL42|ENSG00000198015.8|mitochondrial ribosomal protein L42 	ENST00000393128.4|MRPL42|ENSG00000198015.8|mitochondrial ribosomal protein L42 	ENST00000547098.1|MRPL42|ENSG00000198015.8|mitochondrial ribosomal protein L42
hg19_v2_chr3_+_133293278_133293492	0.0374238	BHLHE40	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr12_+_93861264_93861276	0.0367982	BHLHE40	ENST00000549982.1|MRPL42|ENSG00000198015.8|mitochondrial ribosomal protein L42 	ENST00000361630.2|MRPL42|ENSG00000198015.8|mitochondrial ribosomal protein L42
hg19_v2_chr10_-_35379524_35379570	0.0341497	BHLHE40	ENST00000374751.3|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374742.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000602371.1|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr3_+_111578640_111578645	0.0337581	BHLHE40	ENST00000393925.3|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chr9_-_123691047_123691188	0.0336608	BHLHE40	ENST00000373887.3|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chr4_+_41983713_41983798	0.0318181	BHLHE40	ENST00000333141.5|DCAF4L1|ENSG00000182308.5|DDB1 and CUL4 associated factor 4-like 1
hg19_v2_chr1_-_86174065_86174134	0.0317367	BHLHE40	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr17_+_66624280_66624295	0.0294816	BHLHE40	ENST00000585484.1|RP11-118B18.1|ENSG00000267659.1|RP11-118B18.1
hg19_v2_chr6_+_70576457_70576468	0.0287031	BHLHE40	ENST00000322773.4|COL19A1|ENSG00000082293.8|collagen, type XIX, alpha 1
hg19_v2_chr1_-_231376836_231376865	0.0286042	BHLHE40	ENST00000451322.1|C1orf131|ENSG00000143633.8|chromosome 1 open reading frame 131
hg19_v2_chr8_+_55047763_55047845	0.027996	BHLHE40	ENST00000260102.4|MRPL15|ENSG00000137547.4|mitochondrial ribosomal protein L15 	ENST00000519831.1|MRPL15|ENSG00000137547.4|mitochondrial ribosomal protein L15
hg19_v2_chr11_-_6624801_6624877	0.0276038	BHLHE40	ENST00000534343.1|RRP8|ENSG00000132275.6|ribosomal RNA processing 8, methyltransferase, homolog (yeast) 	ENST00000254605.6|RRP8|ENSG00000132275.6|ribosomal RNA processing 8, methyltransferase, homolog (yeast)
hg19_v2_chr1_-_231376867_231376943	0.0242952	BHLHE40	ENST00000366649.2|C1orf131|ENSG00000143633.8|chromosome 1 open reading frame 131 	ENST00000318906.2|C1orf131|ENSG00000143633.8|chromosome 1 open reading frame 131 	ENST00000366651.3|C1orf131|ENSG00000143633.8|chromosome 1 open reading frame 131
hg19_v2_chr2_-_10587897_10587926	0.0204474	BHLHE40	ENST00000405333.1|ODC1|ENSG00000115758.8|ornithine decarboxylase 1 	ENST00000443218.1|ODC1|ENSG00000115758.8|ornithine decarboxylase 1
hg19_v2_chr17_-_7193711_7193728	0.0197233	BHLHE40	ENST00000571464.1|YBX2|ENSG00000006047.8|Y box binding protein 2
hg19_v2_chr5_+_36152179_36152277	0.0167179	BHLHE40	ENST00000508514.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 	ENST00000513151.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 	ENST00000546211.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chrX_+_23685563_23685648	0.0160226	BHLHE40	ENST00000379341.4|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr2_+_105654441_105654552	0.0151255	BHLHE40	ENST00000258455.3|MRPS9|ENSG00000135972.4|mitochondrial ribosomal protein S9
hg19_v2_chr2_-_241497390_241497438	0.0131643	BHLHE40	ENST00000272972.3|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000401804.1|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000361678.4|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000405523.3|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1
hg19_v2_chr9_-_100881466_100881531	0.0118577	BHLHE40	ENST00000341469.2|TRIM14|ENSG00000106785.10|tripartite motif containing 14 	ENST00000342043.3|TRIM14|ENSG00000106785.10|tripartite motif containing 14 	ENST00000375098.3|TRIM14|ENSG00000106785.10|tripartite motif containing 14
hg19_v2_chr17_+_15635561_15635597	0.0115152	BHLHE40	ENST00000584301.1|TBC1D26|ENSG00000214946.9|TBC1 domain family, member 26 	ENST00000580596.1|TBC1D26|ENSG00000214946.9|TBC1 domain family, member 26 	ENST00000464963.1|TBC1D26|ENSG00000214946.9|TBC1 domain family, member 26 	ENST00000437605.2|TBC1D26|ENSG00000214946.9|TBC1 domain family, member 26 	ENST00000579428.1|TBC1D26|ENSG00000214946.9|TBC1 domain family, member 26
hg19_v2_chr2_-_10588630_10588646	0.0104897	BHLHE40	ENST00000234111.4|ODC1|ENSG00000115758.8|ornithine decarboxylase 1
hg19_v2_chr17_+_74733744_74733785	0.00849462	BHLHE40	ENST00000586689.1|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11 	ENST00000587661.1|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11 	ENST00000593181.1|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11 	ENST00000336509.4|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11 	ENST00000355954.3|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11
hg19_v2_chr1_+_119957554_119957778	0.00810439	BHLHE40	ENST00000543831.1|HSD3B2|ENSG00000203859.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 	ENST00000433745.1|HSD3B2|ENSG00000203859.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 	ENST00000369416.3|HSD3B2|ENSG00000203859.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
hg19_v2_chr16_+_4897912_4897957	0.00802444	BHLHE40	ENST00000545171.1|UBN1|ENSG00000118900.10|ubinuclein 1
hg19_v2_chr22_+_48885272_48885357	0.00765902	BHLHE40	ENST00000402357.1|FAM19A5|ENSG00000219438.4|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg19_v2_chrX_+_23685653_23685681	0.00687123	BHLHE40	ENST00000379331.3|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr22_+_22681656_22681658	0.00676145	BHLHE40	ENST00000390291.2|IGLV1-50|ENSG00000211645.2|immunoglobulin lambda variable 1-50 (non-functional)
hg19_v2_chr19_+_41497178_41497204	0.00664558	BHLHE40	ENST00000324071.4|CYP2B6|ENSG00000197408.4|cytochrome P450, family 2, subfamily B, polypeptide 6
hg19_v2_chr2_+_127413481_127413520	0.0062133	BHLHE40	ENST00000259254.4|GYPC|ENSG00000136732.10|glycophorin C (Gerbich blood group)
hg19_v2_chr17_-_72772462_72772511	0.00568659	BHLHE40	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr8_-_134584152_134584213	0.00492105	BHLHE40	ENST00000521180.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000517668.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000319914.5|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr2_-_47143160_47143251	0.00352995	BHLHE40	ENST00000409800.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409218.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr19_+_15121532_15121556	0.00284506	BHLHE40	ENST00000292574.3|CCDC105|ENSG00000160994.3|coiled-coil domain containing 105
hg19_v2_chr1_+_76262552_76262588	0.00205379	BHLHE40	ENST00000263187.3|MSH4|ENSG00000057468.6|mutS homolog 4
hg19_v2_chr10_-_21435488_21435488	0.000741131	BHLHE40	ENST00000534331.1|C10orf113|ENSG00000204683.6|chromosome 10 open reading frame 113 	ENST00000529198.1|C10orf113|ENSG00000204683.6|chromosome 10 open reading frame 113 	ENST00000377118.4|C10orf113|ENSG00000204683.6|chromosome 10 open reading frame 113
