hg19_v2_chr16_-_31147020_31147083	0.0887713	CAGUCCA	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr19_-_19739007_19739051	0.0844171	CAGUCCA	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr7_+_69064300_69064342	0.07661	CAGUCCA	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr19_-_43969796_43969813	0.0758674	CAGUCCA	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr1_-_41131326_41131400	0.0737658	CAGUCCA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr20_+_6748311_6748352	0.0737212	CAGUCCA	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr1_+_40420802_40420836	0.068525	CAGUCCA	ENST00000372811.5|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000420632.2|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000434861.1|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A 	ENST00000372809.5|MFSD2A|ENSG00000168389.13|major facilitator superfamily domain containing 2A
hg19_v2_chr2_+_85360499_85360598	0.0655561	CAGUCCA	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr14_+_65171099_65171210	0.0566965	CAGUCCA	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr11_-_79151695_79151710	0.056433	CAGUCCA	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr6_-_42419649_42419789	0.0429299	CAGUCCA	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr13_+_25946201_25946215	0.0428874	CAGUCCA	ENST00000381655.2|ATP8A2|ENSG00000132932.12|ATPase, aminophospholipid transporter, class I, type 8A, member 2
hg19_v2_chr1_+_107683644_107683673	0.0353685	CAGUCCA	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr12_+_104850740_104850768	0.0350364	CAGUCCA	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr1_-_54304212_54304255	0.0346373	CAGUCCA	ENST00000540001.1|NDC1|ENSG00000058804.10|NDC1 transmembrane nucleoporin
hg19_v2_chr3_+_124223586_124223628	0.0341863	CAGUCCA	ENST00000393496.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chrX_-_110038990_110038997	0.0333782	CAGUCCA	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr7_+_73242069_73242082	0.0294514	CAGUCCA	ENST00000435050.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr20_-_23066953_23066977	0.0282117	CAGUCCA	ENST00000246006.4|CD93|ENSG00000125810.9|CD93 molecule
hg19_v2_chr3_-_79068594_79068627	0.0260893	CAGUCCA	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr9_-_104145795_104145806	0.0260584	CAGUCCA	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr6_+_147830063_147830063	0.0245458	CAGUCCA	ENST00000367474.1|SAMD5|ENSG00000203727.3|sterile alpha motif domain containing 5
hg19_v2_chr6_-_20212630_20212726	0.0240608	CAGUCCA	ENST00000324607.7|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000541730.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000536798.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1
hg19_v2_chr6_-_10415470_10415508	0.0238301	CAGUCCA	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr5_+_56111361_56111403	0.0238148	CAGUCCA	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chrX_+_16804544_16804613	0.0228957	CAGUCCA	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr19_-_36391434_36391564	0.0205638	CAGUCCA	ENST00000396901.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta 	ENST00000585925.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
hg19_v2_chr4_+_184826418_184826522	0.0202935	CAGUCCA	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr12_-_71148413_71148515	0.0200349	CAGUCCA	ENST00000440835.2|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000549308.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000550661.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr13_+_88324870_88324870	0.0193221	CAGUCCA	ENST00000325089.6|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr17_+_36508111_36508128	0.0192108	CAGUCCA	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr2_+_27440229_27440280	0.0191684	CAGUCCA	ENST00000264705.4|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENST00000403525.1|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v2_chr15_+_45315302_45315440	0.0189424	CAGUCCA	ENST00000267814.9|SORD|ENSG00000140263.9|sorbitol dehydrogenase
hg19_v2_chrX_-_25034065_25034088	0.0189133	CAGUCCA	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr1_+_27153173_27153230	0.0186885	CAGUCCA	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr1_-_40367530_40367597	0.0186843	CAGUCCA	ENST00000372816.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000372815.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr14_-_100070363_100070467	0.0186247	CAGUCCA	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr12_+_95611516_95611527	0.0184991	CAGUCCA	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr19_+_8274204_8274265	0.0181676	CAGUCCA	ENST00000561053.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000251363.5|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559450.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559336.1|CERS4|ENSG00000090661.7|ceramide synthase 4
hg19_v2_chr9_+_132565418_132565444	0.0180137	CAGUCCA	ENST00000259339.2|TOR1B|ENSG00000136816.11|torsin family 1, member B (torsin B)
hg19_v2_chr6_+_118228657_118228715	0.0179279	CAGUCCA	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr11_-_118305921_118305921	0.0175477	CAGUCCA	ENST00000532619.1|RP11-770J1.4|ENSG00000255384.1|RP11-770J1.4
hg19_v2_chr12_+_11802753_11802834	0.017209	CAGUCCA	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr19_+_49622646_49622699	0.0171654	CAGUCCA	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr11_+_14665263_14665274	0.0168293	CAGUCCA	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chrX_+_100474711_100474758	0.0167408	CAGUCCA	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr5_-_76935513_76935513	0.0165982	CAGUCCA	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr16_+_22217577_22217667	0.016386	CAGUCCA	ENST00000263026.5|EEF2K|ENSG00000103319.7|eukaryotic elongation factor-2 kinase
hg19_v2_chrX_+_153639856_153639943	0.0162026	CAGUCCA	ENST00000426834.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000369790.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000454722.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000350743.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000299328.5|TAZ|ENSG00000102125.11|tafazzin 	ENST00000351413.4|TAZ|ENSG00000102125.11|tafazzin
hg19_v2_chr2_-_172290482_172290596	0.0161606	CAGUCCA	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr5_-_115910630_115910657	0.0160512	CAGUCCA	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chrX_+_69664706_69664819	0.0158711	CAGUCCA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr19_-_14629224_14629262	0.0158686	CAGUCCA	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr16_+_9185450_9185516	0.0158565	CAGUCCA	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chrX_-_48824793_48824793	0.0158385	CAGUCCA	ENST00000376477.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr3_+_38495333_38495422	0.0156609	CAGUCCA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr11_+_64126614_64126665	0.0155699	CAGUCCA	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr16_+_30935418_30935418	0.015193	CAGUCCA	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr2_-_61765315_61765422	0.014881	CAGUCCA	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr12_+_57943781_57943869	0.0147138	CAGUCCA	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr8_+_145515263_145515299	0.0147046	CAGUCCA	ENST00000528838.1|HSF1|ENSG00000185122.6|heat shock transcription factor 1
hg19_v2_chr19_+_13049413_13049459	0.0143714	CAGUCCA	ENST00000316448.5|CALR|ENSG00000179218.9|calreticulin 	ENST00000588454.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr1_+_155290677_155290753	0.0140239	CAGUCCA	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr17_-_48943706_48943723	0.0135197	CAGUCCA	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr12_+_57984965_57985059	0.0132219	CAGUCCA	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr9_+_103235365_103235419	0.0129039	CAGUCCA	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr6_-_29527702_29527702	0.0125739	CAGUCCA	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr2_+_153191706_153191751	0.0123766	CAGUCCA	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr1_+_201979645_201979721	0.0119308	CAGUCCA	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr6_-_90529418_90529528	0.0114214	CAGUCCA	ENST00000439638.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000369393.3|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000428876.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast)
hg19_v2_chr4_-_100575781_100575805	0.0109938	CAGUCCA	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr18_-_70210764_70210794	0.0108699	CAGUCCA	ENST00000585159.1|CBLN2|ENSG00000141668.5|cerebellin 2 precursor 	ENST00000584764.1|CBLN2|ENSG00000141668.5|cerebellin 2 precursor
hg19_v2_chr1_+_20617362_20617412	0.0106882	CAGUCCA	ENST00000375079.2|VWA5B1|ENSG00000158816.11|von Willebrand factor A domain containing 5B1 	ENST00000289815.8|VWA5B1|ENSG00000158816.11|von Willebrand factor A domain containing 5B1 	ENST00000375083.4|VWA5B1|ENSG00000158816.11|von Willebrand factor A domain containing 5B1 	ENST00000289825.4|VWA5B1|ENSG00000158816.11|von Willebrand factor A domain containing 5B1
hg19_v2_chr3_+_9773409_9773479	0.0102822	CAGUCCA	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr10_+_88516396_88516426	0.0099712	CAGUCCA	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr6_-_17706618_17706666	0.00989618	CAGUCCA	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chrX_+_48554986_48555164	0.00966482	CAGUCCA	ENST00000376687.3|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila) 	ENST00000453214.2|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila)
hg19_v2_chr21_-_36260980_36261011	0.00939237	CAGUCCA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr2_-_55237484_55237585	0.00930356	CAGUCCA	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr19_-_46296011_46296061	0.00916497	CAGUCCA	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr8_-_122653630_122653661	0.00909705	CAGUCCA	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr8_+_26149007_26149061	0.00902903	CAGUCCA	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr9_+_103204553_103204560	0.00897852	CAGUCCA	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr13_+_42622781_42622889	0.00882384	CAGUCCA	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr12_+_54447637_54447661	0.00878646	CAGUCCA	ENST00000609810.1|HOXC4|ENSG00000198353.6|homeobox C4 	ENST00000430889.2|HOXC4|ENSG00000273266.1|Homeobox protein Hox-C4
hg19_v2_chr5_-_39074479_39074515	0.00861308	CAGUCCA	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr9_-_101471479_101471522	0.00832216	CAGUCCA	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr17_-_48227877_48227877	0.0081676	CAGUCCA	ENST00000316878.6|PPP1R9B|ENSG00000108819.9|protein phosphatase 1, regulatory subunit 9B
hg19_v2_chr11_-_129062093_129062184	0.00814885	CAGUCCA	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chrX_+_122993827_122993910	0.00802322	CAGUCCA	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr7_-_75988321_75988348	0.00764176	CAGUCCA	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr1_-_40105617_40105617	0.00748524	CAGUCCA	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr3_-_128902729_128902753	0.00709654	CAGUCCA	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr4_-_99851766_99851788	0.00685147	CAGUCCA	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr19_+_19496624_19496660	0.00683172	CAGUCCA	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr1_-_17766198_17766232	0.00681306	CAGUCCA	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr2_-_225450013_225450068	0.00678928	CAGUCCA	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr11_-_134281812_134281828	0.00665978	CAGUCCA	ENST00000392580.1|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENST00000312527.4|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v2_chr19_+_7598890_7599090	0.00652921	CAGUCCA	ENST00000221249.6|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601668.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601001.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr22_+_39101728_39101763	0.00634448	CAGUCCA	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr11_-_118966167_118966182	0.00629624	CAGUCCA	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr17_-_16395455_16395467	0.00611043	CAGUCCA	ENST00000409083.3|FAM211A|ENSG00000181350.7|family with sequence similarity 211, member A
hg19_v2_chr2_-_69870835_69870853	0.00608074	CAGUCCA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr18_-_29522989_29523104	0.00596949	CAGUCCA	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr3_-_50540854_50540887	0.00594257	CAGUCCA	ENST00000423994.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000424201.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000479441.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000429770.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg19_v2_chr6_-_114292449_114292474	0.00590585	CAGUCCA	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr18_-_500692_500748	0.00552007	CAGUCCA	ENST00000400256.3|COLEC12|ENSG00000158270.10|collectin sub-family member 12
hg19_v2_chr12_-_27091183_27091271	0.005329	CAGUCCA	ENST00000544548.1|ASUN|ENSG00000064102.10|asunder spermatogenesis regulator 	ENST00000261191.7|ASUN|ENSG00000064102.10|asunder spermatogenesis regulator 	ENST00000537336.1|ASUN|ENSG00000064102.10|asunder spermatogenesis regulator
hg19_v2_chr10_-_71930222_71930280	0.00529033	CAGUCCA	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr3_-_11762202_11762226	0.00525483	CAGUCCA	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr15_+_41851211_41851232	0.00522692	CAGUCCA	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr2_-_131850951_131851065	0.00517816	CAGUCCA	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr15_+_72766651_72766680	0.00512435	CAGUCCA	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr3_+_196466710_196466824	0.00511628	CAGUCCA	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr1_-_153950164_153950184	0.00484756	CAGUCCA	ENST00000271843.4|JTB|ENSG00000143543.10|jumping translocation breakpoint
hg19_v2_chr2_+_219081817_219081933	0.0048311	CAGUCCA	ENST00000315717.5|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000420104.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000295685.10|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr12_+_130646999_130647019	0.00479595	CAGUCCA	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr4_-_100871506_100871545	0.00467924	CAGUCCA	ENST00000296417.5|H2AFZ|ENSG00000164032.7|H2A histone family, member Z
hg19_v2_chr6_+_76458909_76458934	0.00466922	CAGUCCA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr17_-_46671323_46671323	0.00463716	CAGUCCA	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr14_+_23775971_23776000	0.0045332	CAGUCCA	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr10_-_120514720_120514758	0.00432797	CAGUCCA	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr11_-_47198380_47198448	0.00421564	CAGUCCA	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr6_+_123317116_123317260	0.00419981	CAGUCCA	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr2_+_105471969_105471969	0.00406978	CAGUCCA	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr3_-_132004251_132004258	0.00375884	CAGUCCA	ENST00000512055.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chr8_-_103876965_103877012	0.00354488	CAGUCCA	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr6_-_28891709_28891769	0.00325745	CAGUCCA	ENST00000377194.3|TRIM27|ENSG00000204713.6|tripartite motif containing 27 	ENST00000377199.3|TRIM27|ENSG00000204713.6|tripartite motif containing 27
hg19_v2_chr17_+_38375574_38375615	0.00305279	CAGUCCA	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr4_-_177713788_177713881	0.00302964	CAGUCCA	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr8_+_22224811_22224822	0.003004	CAGUCCA	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr11_+_125439298_125439385	0.00296075	CAGUCCA	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chr22_+_45559722_45559881	0.00295109	CAGUCCA	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr15_+_90931450_90931544	0.00269156	CAGUCCA	ENST00000268182.5|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560738.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560418.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1
hg19_v2_chr2_-_197036289_197036314	0.00251613	CAGUCCA	ENST00000263955.4|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr4_+_174089904_174089921	0.00221243	CAGUCCA	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr10_+_98592009_98592061	0.00213953	CAGUCCA	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr21_-_40685477_40685496	0.0021368	CAGUCCA	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr9_+_100745615_100745648	0.0020901	CAGUCCA	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chr15_+_62853562_62853614	0.00207971	CAGUCCA	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr15_-_65809581_65809617	0.00191372	CAGUCCA	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr1_-_115300592_115300648	0.00187672	CAGUCCA	ENST00000261443.5|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000534699.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000339438.6|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000529046.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000525970.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000369530.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000530886.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
hg19_v2_chr11_-_35440796_35440916	0.00164135	CAGUCCA	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr15_-_35047166_35047204	0.00142695	CAGUCCA	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr22_-_39096661_39096681	0.00120336	CAGUCCA	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr3_+_25469724_25469773	0.00116473	CAGUCCA	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr7_+_88388628_88388682	0.00114128	CAGUCCA	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr3_-_39195037_39195069	0.00109633	CAGUCCA	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr11_-_116643688_116643719	0.00104548	CAGUCCA	ENST00000375445.3|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae) 	ENST00000260210.4|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae)
hg19_v2_chr17_-_73851285_73851501	0.00102541	CAGUCCA	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr21_+_47878757_47879024	0.000943748	CAGUCCA	ENST00000400274.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000427143.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000318711.7|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000457905.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000466639.1|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000435722.3|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila) 	ENST00000417564.2|DIP2A|ENSG00000160305.13|DIP2 disco-interacting protein 2 homolog A (Drosophila)
hg19_v2_chr1_-_35658736_35658754	0.000682985	CAGUCCA	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr20_-_30795511_30795594	0.000487691	CAGUCCA	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr17_+_56160768_56160786	0.000482852	CAGUCCA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr13_-_45915221_45915347	0.000403605	CAGUCCA	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr19_+_45973120_45973171	0.000343383	CAGUCCA	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr12_+_98987369_98987503	0.000336301	CAGUCCA	ENST00000401722.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000188376.5|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000228318.3|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551917.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548046.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000552981.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000551265.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000550695.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000547534.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000549338.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 	ENST00000548847.1|SLC25A3|ENSG00000075415.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
hg19_v2_chr12_-_110841462_110841540	0.000298948	CAGUCCA	ENST00000455511.3|ANAPC7|ENSG00000196510.8|anaphase promoting complex subunit 7 	ENST00000450008.2|ANAPC7|ENSG00000196510.8|anaphase promoting complex subunit 7
hg19_v2_chr3_+_169684553_169684616	0.00028675	CAGUCCA	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr3_-_122233723_122233797	0.000272898	CAGUCCA	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr16_-_79634595_79634620	0.000157591	CAGUCCA	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr4_+_8271471_8271504	7.56649e-06	CAGUCCA	ENST00000307358.2|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3 	ENST00000382512.3|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3
