hg19_v2_chr15_-_48937982_48938046	1.0302	CAGUGCA	ENST00000316623.5|FBN1|ENSG00000166147.9|fibrillin 1
hg19_v2_chr1_-_57045228_57045242	0.947437	CAGUGCA	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr21_-_39288743_39288765	0.692432	CAGUGCA	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr2_+_33359687_33359724	0.60034	CAGUGCA	ENST00000402934.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000404525.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000407925.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1
hg19_v2_chr11_+_113930291_113930339	0.48306	CAGUGCA	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr13_-_33859819_33859910	0.414696	CAGUGCA	ENST00000336934.5|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr5_+_71403061_71403169	0.414094	CAGUGCA	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr5_-_172198190_172198206	0.407203	CAGUGCA	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr3_+_69812877_69812962	0.377315	CAGUGCA	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr5_+_172068232_172068320	0.331365	CAGUGCA	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr2_-_238323007_238323038	0.330974	CAGUGCA	ENST00000295550.4|COL6A3|ENSG00000163359.11|collagen, type VI, alpha 3
hg19_v2_chr7_+_100770328_100770393	0.32345	CAGUGCA	ENST00000223095.4|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 	ENST00000445463.2|SERPINE1|ENSG00000106366.7|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
hg19_v2_chr10_-_33623564_33623603	0.318047	CAGUGCA	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr2_+_56411131_56411258	0.292786	CAGUGCA	ENST00000407595.2|CCDC85A|ENSG00000055813.5|coiled-coil domain containing 85A
hg19_v2_chr5_-_126366500_126366547	0.286661	CAGUGCA	ENST00000308660.5|MARCH3|ENSG00000173926.5|membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
hg19_v2_chr7_-_131241361_131241398	0.279985	CAGUGCA	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr5_-_90679145_90679176	0.276462	CAGUGCA	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr5_+_118407053_118407239	0.263071	CAGUGCA	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr3_+_105085734_105085760	0.260459	CAGUGCA	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr1_+_213123915_213123955	0.259936	CAGUGCA	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr1_+_145438469_145438501	0.25356	CAGUGCA	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chrX_+_77166172_77166261	0.250617	CAGUGCA	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr10_+_60272814_60272900	0.246531	CAGUGCA	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr14_+_53019822_53019873	0.242451	CAGUGCA	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr15_-_49338748_49338765	0.223464	CAGUGCA	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr2_-_180129484_180129574	0.213773	CAGUGCA	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr1_+_78470530_78470551	0.212872	CAGUGCA	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr20_+_34700333_34700348	0.200148	CAGUGCA	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr17_-_78450398_78450413	0.198618	CAGUGCA	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr4_+_55524085_55524110	0.19387	CAGUGCA	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr19_+_926000_926046	0.184713	CAGUGCA	ENST00000263620.3|ARID3A|ENSG00000116017.6|AT rich interactive domain 3A (BRIGHT-like)
hg19_v2_chr5_+_173315283_173315335	0.179107	CAGUGCA	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr20_-_5591626_5591677	0.17121	CAGUGCA	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr9_-_89562104_89562104	0.1702	CAGUGCA	ENST00000298743.7|GAS1|ENSG00000180447.5|growth arrest-specific 1
hg19_v2_chr3_-_164913777_164913790	0.166504	CAGUGCA	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr12_-_54813229_54813273	0.165776	CAGUGCA	ENST00000293379.4|ITGA5|ENSG00000161638.6|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
hg19_v2_chr3_-_172428959_172429013	0.156244	CAGUGCA	ENST00000475381.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000538775.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000273512.3|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1 	ENST00000543711.1|NCEH1|ENSG00000144959.5|neutral cholesterol ester hydrolase 1
hg19_v2_chr7_+_29603394_29603427	0.154614	CAGUGCA	ENST00000319694.2|PRR15|ENSG00000176532.3|proline rich 15
hg19_v2_chr3_+_194406603_194406622	0.153934	CAGUGCA	ENST00000329759.4|FAM43A|ENSG00000185112.4|family with sequence similarity 43, member A
hg19_v2_chr8_-_67525473_67525518	0.151317	CAGUGCA	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr6_+_144471643_144471663	0.150964	CAGUGCA	ENST00000367568.4|STX11|ENSG00000135604.9|syntaxin 11
hg19_v2_chr5_+_125935960_125935960	0.147981	CAGUGCA	ENST00000297540.4|PHAX|ENSG00000164902.9|phosphorylated adaptor for RNA export
hg19_v2_chr9_+_91003271_91003386	0.14781	CAGUGCA	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr7_-_14029515_14029642	0.144626	CAGUGCA	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr20_+_11871371_11871428	0.143852	CAGUGCA	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr11_+_118307179_118307228	0.141806	CAGUGCA	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr7_+_116312411_116312502	0.141369	CAGUGCA	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr2_-_182545603_182545603	0.137667	CAGUGCA	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr4_+_6784401_6784510	0.132352	CAGUGCA	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chrX_-_154493791_154493874	0.132315	CAGUGCA	ENST00000369454.3|RAB39B|ENSG00000155961.4|RAB39B, member RAS oncogene family
hg19_v2_chr18_-_18691739_18691812	0.130817	CAGUGCA	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr19_-_40324255_40324296	0.130679	CAGUGCA	ENST00000593685.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000600611.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr16_+_53088885_53088961	0.129214	CAGUGCA	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr5_-_59189545_59189625	0.128643	CAGUGCA	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr9_-_110251836_110251927	0.128574	CAGUGCA	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr2_-_101767715_101767881	0.125635	CAGUGCA	ENST00000376840.4|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain) 	ENST00000409318.1|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain)
hg19_v2_chr1_-_46598284_46598356	0.125565	CAGUGCA	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr13_-_107187462_107187462	0.124383	CAGUGCA	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr13_-_50510434_50510490	0.122192	CAGUGCA	ENST00000361840.3|SPRYD7|ENSG00000123178.10|SPRY domain containing 7
hg19_v2_chr8_+_70378852_70378866	0.119917	CAGUGCA	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr16_-_73082274_73082274	0.119895	CAGUGCA	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr9_-_26947453_26947473	0.118158	CAGUGCA	ENST00000397292.3|PLAA|ENSG00000137055.10|phospholipase A2-activating protein
hg19_v2_chr12_+_66217911_66218018	0.115706	CAGUGCA	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr11_+_125462690_125462768	0.114408	CAGUGCA	ENST00000392708.4|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000529196.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000531491.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr11_-_68609377_68609399	0.113551	CAGUGCA	ENST00000265641.5|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver) 	ENST00000376618.2|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver)
hg19_v2_chr6_-_30585009_30585028	0.112405	CAGUGCA	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr3_-_125313934_125313934	0.112241	CAGUGCA	ENST00000296220.5|OSBPL11|ENSG00000144909.7|oxysterol binding protein-like 11
hg19_v2_chr10_+_47894023_47894023	0.111993	CAGUGCA	ENST00000358474.5|FAM21B|ENSG00000152726.14|family with sequence similarity 21, member B
hg19_v2_chr5_-_133512683_133512729	0.109621	CAGUGCA	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr17_-_76356148_76356165	0.108724	CAGUGCA	ENST00000587578.1|SOCS3|ENSG00000184557.3|suppressor of cytokine signaling 3 	ENST00000330871.2|SOCS3|ENSG00000184557.3|suppressor of cytokine signaling 3
hg19_v2_chr3_+_138066539_138066580	0.107536	CAGUGCA	ENST00000289104.4|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr1_+_162467595_162467655	0.105893	CAGUGCA	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr6_-_111136513_111136525	0.10585	CAGUGCA	ENST00000368911.3|CDK19|ENSG00000155111.10|cyclin-dependent kinase 19
hg19_v2_chr1_+_218519577_218519594	0.104691	CAGUGCA	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr21_-_34100244_34100277	0.104688	CAGUGCA	ENST00000382491.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000357345.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000429236.1|SYNJ1|ENSG00000159082.13|synaptojanin 1
hg19_v2_chr11_+_73019282_73019355	0.103022	CAGUGCA	ENST00000263674.3|ARHGEF17|ENSG00000110237.3|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v2_chr12_+_79258547_79258607	0.0981374	CAGUGCA	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr3_-_64211112_64211152	0.0971467	CAGUGCA	ENST00000295902.6|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr8_-_53322303_53322340	0.0964526	CAGUGCA	ENST00000276480.7|ST18|ENSG00000147488.7|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v2_chr10_+_93683519_93683594	0.0958495	CAGUGCA	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr5_+_134181625_134181713	0.0944746	CAGUGCA	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr16_-_77468945_77469011	0.0943514	CAGUGCA	ENST00000282849.5|ADAMTS18|ENSG00000140873.11|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg19_v2_chr16_+_69599861_69599887	0.0934614	CAGUGCA	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_+_11866207_11866268	0.0911666	CAGUGCA	ENST00000312413.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000346436.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr17_-_79876010_79876075	0.0901644	CAGUGCA	ENST00000328666.6|SIRT7|ENSG00000187531.9|sirtuin 7
hg19_v2_chr1_+_112938803_112938860	0.0898415	CAGUGCA	ENST00000271277.6|CTTNBP2NL|ENSG00000143079.10|CTTNBP2 N-terminal like
hg19_v2_chr20_+_43514315_43514319	0.0883875	CAGUGCA	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr3_+_9691117_9691207	0.087472	CAGUGCA	ENST00000353332.5|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000420925.1|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000296003.4|MTMR14|ENSG00000163719.14|myotubularin related protein 14 	ENST00000351233.5|MTMR14|ENSG00000163719.14|myotubularin related protein 14
hg19_v2_chrX_+_40440146_40440268	0.0856155	CAGUGCA	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr5_-_98262240_98262240	0.0855596	CAGUGCA	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr12_-_82153087_82153138	0.0853816	CAGUGCA	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr1_-_173991434_173991556	0.0838847	CAGUGCA	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr5_+_96271141_96271168	0.0835385	CAGUGCA	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr8_+_11141925_11141937	0.082374	CAGUGCA	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr2_-_36825281_36825342	0.0807192	CAGUGCA	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr16_+_24741013_24741058	0.0807081	CAGUGCA	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chrX_+_12993202_12993239	0.0805321	CAGUGCA	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr20_+_3776371_3776506	0.0804275	CAGUGCA	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chrX_-_18372792_18372847	0.0797735	CAGUGCA	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr3_+_150804676_150804697	0.0793024	CAGUGCA	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr12_-_50561075_50561205	0.0791745	CAGUGCA	ENST00000422340.2|CERS5|ENSG00000139624.8|ceramide synthase 5 	ENST00000317551.6|CERS5|ENSG00000139624.8|ceramide synthase 5
hg19_v2_chr4_+_142557717_142557757	0.077031	CAGUGCA	ENST00000320650.4|IL15|ENSG00000164136.12|interleukin 15 	ENST00000296545.7|IL15|ENSG00000164136.12|interleukin 15
hg19_v2_chr5_+_135468516_135468621	0.076076	CAGUGCA	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr5_+_179125907_179126038	0.0750598	CAGUGCA	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr6_+_147525541_147525566	0.0744711	CAGUGCA	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr11_+_12695944_12695989	0.0737804	CAGUGCA	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr12_-_76478686_76478813	0.0732745	CAGUGCA	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr11_+_109964087_109964123	0.0726563	CAGUGCA	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr2_+_24714729_24714927	0.0720851	CAGUGCA	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr17_+_28705921_28706000	0.0720261	CAGUGCA	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr10_-_25012597_25012732	0.0712526	CAGUGCA	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr6_-_24721054_24721074	0.0686917	CAGUGCA	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr14_-_35182994_35183034	0.0684415	CAGUGCA	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr22_+_40573921_40573946	0.0683463	CAGUGCA	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr5_-_176730676_176730730	0.0674369	CAGUGCA	ENST00000393611.2|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family 	ENST00000303251.6|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family 	ENST00000303270.6|RAB24|ENSG00000169228.9|RAB24, member RAS oncogene family
hg19_v2_chr10_-_3827417_3827473	0.0665124	CAGUGCA	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr22_+_30115986_30116073	0.0660157	CAGUGCA	ENST00000216144.3|CABP7|ENSG00000100314.3|calcium binding protein 7
hg19_v2_chr2_-_24583168_24583179	0.0659634	CAGUGCA	ENST00000361999.3|ITSN2|ENSG00000198399.10|intersectin 2
hg19_v2_chr2_-_202316260_202316308	0.0659429	CAGUGCA	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr22_+_20067738_20067771	0.0656536	CAGUGCA	ENST00000351989.3|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit 	ENST00000383024.2|DGCR8|ENSG00000128191.9|DGCR8 microprocessor complex subunit
hg19_v2_chr18_-_72921303_72921339	0.0645097	CAGUGCA	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr4_+_81951957_81952119	0.0642148	CAGUGCA	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr8_-_116681221_116681236	0.0636171	CAGUGCA	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chrX_-_19988382_19988416	0.0632567	CAGUGCA	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chrX_+_150151752_150151762	0.0629362	CAGUGCA	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr6_-_88876058_88876078	0.0627273	CAGUGCA	ENST00000369501.2|CNR1|ENSG00000118432.11|cannabinoid receptor 1 (brain)
hg19_v2_chr2_+_121103706_121103754	0.0625901	CAGUGCA	ENST00000295228.3|INHBB|ENSG00000163083.5|inhibin, beta B
hg19_v2_chr21_-_44846999_44847017	0.0615807	CAGUGCA	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr11_+_120207787_120207962	0.0606761	CAGUGCA	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr4_+_144106080_144106144	0.0606517	CAGUGCA	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr7_-_86688990_86689026	0.0604014	CAGUGCA	ENST00000450689.2|KIAA1324L|ENSG00000164659.10|KIAA1324-like
hg19_v2_chr7_+_114562172_114562243	0.0595184	CAGUGCA	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr17_+_5031687_5031687	0.0589746	CAGUGCA	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr2_+_202316392_202316519	0.057936	CAGUGCA	ENST00000194530.3|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta 	ENST00000392249.2|STRADB|ENSG00000082146.8|STE20-related kinase adaptor beta
hg19_v2_chr5_+_95997918_95998007	0.0565327	CAGUGCA	ENST00000395812.2|CAST|ENSG00000153113.19|calpastatin 	ENST00000395813.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000359176.4|CAST|ENSG00000153113.19|calpastatin 	ENST00000325674.7|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr9_+_114659046_114659102	0.0560735	CAGUGCA	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr3_+_9773409_9773479	0.0536109	CAGUGCA	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr17_-_66287257_66287276	0.0528159	CAGUGCA	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr2_+_54951679_54951679	0.0524971	CAGUGCA	ENST00000356458.6|EML6|ENSG00000214595.7|echinoderm microtubule associated protein like 6
hg19_v2_chr1_-_229694406_229694477	0.0523178	CAGUGCA	ENST00000344517.4|ABCB10|ENSG00000135776.4|ATP-binding cassette, sub-family B (MDR/TAP), member 10
hg19_v2_chr5_+_112849373_112849416	0.0520359	CAGUGCA	ENST00000161863.4|YTHDC2|ENSG00000047188.11|YTH domain containing 2 	ENST00000515883.1|YTHDC2|ENSG00000047188.11|YTH domain containing 2
hg19_v2_chr17_-_7232585_7232712	0.0518725	CAGUGCA	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr10_+_46222648_46222738	0.0515154	CAGUGCA	ENST00000336378.4|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C 	ENST00000540872.1|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C 	ENST00000537517.1|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C 	ENST00000374362.2|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C 	ENST00000359860.4|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C 	ENST00000420848.1|FAM21C|ENSG00000172661.13|family with sequence similarity 21, member C
hg19_v2_chr19_+_11200038_11200155	0.0504291	CAGUGCA	ENST00000558518.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000557933.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000455727.2|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000535915.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000545707.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor 	ENST00000558013.1|LDLR|ENSG00000130164.7|low density lipoprotein receptor
hg19_v2_chr11_-_18656028_18656040	0.0497998	CAGUGCA	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr10_+_21823079_21823102	0.0492604	CAGUGCA	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr16_-_71843047_71843104	0.0492367	CAGUGCA	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_-_42580738_42580798	0.0483412	CAGUGCA	ENST00000585614.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000591680.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000434000.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000588554.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000592154.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8
hg19_v2_chr11_+_77300669_77300714	0.048237	CAGUGCA	ENST00000313578.3|AQP11|ENSG00000178301.3|aquaporin 11
hg19_v2_chr1_-_22109682_22109719	0.0481839	CAGUGCA	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr7_-_105517021_105517050	0.0481133	CAGUGCA	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr15_+_51200859_51200870	0.0478193	CAGUGCA	ENST00000261842.5|AP4E1|ENSG00000081014.6|adaptor-related protein complex 4, epsilon 1 subunit
hg19_v2_chr18_+_63418068_63418157	0.046808	CAGUGCA	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr1_-_78225482_78225544	0.0466225	CAGUGCA	ENST00000524778.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370794.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370793.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370792.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33
hg19_v2_chr1_+_36396677_36396749	0.0464422	CAGUGCA	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr17_-_16118835_16118867	0.0462235	CAGUGCA	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr19_-_46285736_46285754	0.0460796	CAGUGCA	ENST00000291270.4|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000447742.2|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000354227.5|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase
hg19_v2_chr1_-_214724566_214724566	0.0450848	CAGUGCA	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr1_+_156163880_156163917	0.0440232	CAGUGCA	ENST00000359511.4|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44 	ENST00000423538.2|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44
hg19_v2_chrX_-_19905703_19905724	0.0439617	CAGUGCA	ENST00000397821.3|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr14_-_61190754_61190852	0.0433934	CAGUGCA	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr7_-_6312206_6312308	0.0430387	CAGUGCA	ENST00000350796.3|CYTH3|ENSG00000008256.11|cytohesin 3
hg19_v2_chr22_-_36236265_36236481	0.0430036	CAGUGCA	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr12_+_68042495_68042508	0.0424026	CAGUGCA	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr10_+_51187938_51187938	0.0413776	CAGUGCA	ENST00000311663.5|FAM21D|ENSG00000174196.5|family with sequence similarity 21, member D
hg19_v2_chr4_+_93225550_93225641	0.0413234	CAGUGCA	ENST00000282020.4|GRID2|ENSG00000152208.7|glutamate receptor, ionotropic, delta 2
hg19_v2_chrX_-_134049262_134049297	0.0412491	CAGUGCA	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr3_-_176914238_176914277	0.0410145	CAGUGCA	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr22_-_21213029_21213106	0.0407756	CAGUGCA	ENST00000572273.1|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha 	ENST00000255882.6|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha
hg19_v2_chr4_-_103748880_103749047	0.0407155	CAGUGCA	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr2_-_219433014_219433100	0.0404671	CAGUGCA	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr16_-_18812746_18813000	0.0401274	CAGUGCA	ENST00000546206.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000567078.2|RP11-1035H13.3|ENSG00000260342.2|Uncharacterized protein  	ENST00000562819.1|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000562234.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000304414.7|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1
hg19_v2_chr15_-_35047166_35047204	0.0395642	CAGUGCA	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr16_+_58059470_58059470	0.039031	CAGUGCA	ENST00000219271.3|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr1_+_12227035_12227060	0.0389895	CAGUGCA	ENST00000376259.3|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B 	ENST00000536782.1|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B
hg19_v2_chr19_+_8483272_8483300	0.0389733	CAGUGCA	ENST00000602117.1|MARCH2|ENSG00000099785.6|membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
hg19_v2_chr6_+_64345698_64345750	0.0388177	CAGUGCA	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr17_+_57784826_57784883	0.0386371	CAGUGCA	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr10_+_95256356_95256408	0.0381274	CAGUGCA	ENST00000371485.3|CEP55|ENSG00000138180.11|centrosomal protein 55kDa
hg19_v2_chr5_-_114961858_114961876	0.0380273	CAGUGCA	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr18_+_59854480_59854551	0.0376252	CAGUGCA	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr11_-_10315741_10315773	0.0363977	CAGUGCA	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr17_-_53499310_53499353	0.0360021	CAGUGCA	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr7_+_56119323_56119492	0.0360009	CAGUGCA	ENST00000275603.4|CCT6A|ENSG00000146731.6|chaperonin containing TCP1, subunit 6A (zeta 1) 	ENST00000335503.3|CCT6A|ENSG00000146731.6|chaperonin containing TCP1, subunit 6A (zeta 1) 	ENST00000540286.1|CCT6A|ENSG00000146731.6|chaperonin containing TCP1, subunit 6A (zeta 1)
hg19_v2_chr2_-_164592497_164592573	0.0359486	CAGUGCA	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr6_-_34360413_34360453	0.035813	CAGUGCA	ENST00000607016.1|NUDT3|ENSG00000272325.1|nudix (nucleoside diphosphate linked moiety X)-type motif 3
hg19_v2_chr3_-_122233723_122233797	0.0357459	CAGUGCA	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr20_+_2854066_2854329	0.0354518	CAGUGCA	ENST00000455631.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000216877.6|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000399903.2|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000358719.4|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000431048.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000425918.2|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000430705.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000318266.5|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A
hg19_v2_chr20_+_34359905_34359991	0.035327	CAGUGCA	ENST00000374012.3|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000439301.1|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000339089.6|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000374000.4|PHF20|ENSG00000025293.11|PHD finger protein 20
hg19_v2_chr1_-_115259337_115259515	0.0352858	CAGUGCA	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr13_-_110959478_110959511	0.0346662	CAGUGCA	ENST00000543140.1|COL4A1|ENSG00000187498.10|collagen, type IV, alpha 1 	ENST00000375820.4|COL4A1|ENSG00000187498.10|collagen, type IV, alpha 1
hg19_v2_chr17_+_46125707_46125746	0.0344174	CAGUGCA	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr1_+_24286287_24286326	0.0343809	CAGUGCA	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr20_+_1246908_1246999	0.0342576	CAGUGCA	ENST00000381873.3|SNPH|ENSG00000101298.9|syntaphilin 	ENST00000381867.1|SNPH|ENSG00000101298.9|syntaphilin
hg19_v2_chr3_-_185826855_185826911	0.0341654	CAGUGCA	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chr1_-_109584608_109584712	0.0341467	CAGUGCA	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr1_-_225615599_225615802	0.0328373	CAGUGCA	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr4_-_42659102_42659161	0.0323478	CAGUGCA	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr17_-_71228357_71228533	0.0320447	CAGUGCA	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr2_-_197457335_197457421	0.0316864	CAGUGCA	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr12_-_50101165_50101259	0.0315424	CAGUGCA	ENST00000352151.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000335154.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000293590.5|FMNL3|ENSG00000161791.9|formin-like 3
hg19_v2_chr12_+_22778009_22778112	0.0312665	CAGUGCA	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr3_-_141868357_141868393	0.0307424	CAGUGCA	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr11_+_123396528_123396566	0.0306284	CAGUGCA	ENST00000322282.7|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B 	ENST00000529750.1|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B
hg19_v2_chr9_+_77703414_77703479	0.0298446	CAGUGCA	ENST00000346234.6|OSTF1|ENSG00000134996.11|osteoclast stimulating factor 1
hg19_v2_chr11_-_64570706_64570717	0.0283245	CAGUGCA	ENST00000294066.2|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2 	ENST00000377350.3|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2
hg19_v2_chr4_+_39046615_39046680	0.0282728	CAGUGCA	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chrX_+_109246285_109246352	0.0275324	CAGUGCA	ENST00000372073.1|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000372068.2|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000288381.4|TMEM164|ENSG00000157600.7|transmembrane protein 164
hg19_v2_chr15_-_75135453_75135538	0.0270921	CAGUGCA	ENST00000569437.1|ULK3|ENSG00000140474.8|unc-51 like kinase 3 	ENST00000440863.2|ULK3|ENSG00000140474.8|unc-51 like kinase 3
hg19_v2_chr8_-_93115445_93115462	0.0270217	CAGUGCA	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr4_+_140222609_140222742	0.0270126	CAGUGCA	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr12_-_92536433_92536459	0.0270048	CAGUGCA	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr5_-_89825328_89825422	0.0268581	CAGUGCA	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr17_+_55333876_55333939	0.0265953	CAGUGCA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr12_-_77459306_77459365	0.0264377	CAGUGCA	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr8_-_62627057_62627159	0.0258511	CAGUGCA	ENST00000519234.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379449.6|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000379454.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518068.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517856.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000356457.5|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr3_-_197476560_197476577	0.0255559	CAGUGCA	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr5_-_138775177_138775220	0.0254414	CAGUGCA	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr11_-_118661828_118661886	0.024236	CAGUGCA	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr5_-_40798263_40798300	0.0235703	CAGUGCA	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr16_+_87636474_87636533	0.0233389	CAGUGCA	ENST00000284262.2|JPH3|ENSG00000154118.8|junctophilin 3
hg19_v2_chr17_+_16593539_16593639	0.0229674	CAGUGCA	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr2_+_5832799_5832799	0.0227926	CAGUGCA	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr3_+_37493610_37493651	0.0213258	CAGUGCA	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr3_-_160283348_160283376	0.0208447	CAGUGCA	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr5_+_128795958_128796012	0.0204977	CAGUGCA	ENST00000274487.4|ADAMTS19|ENSG00000145808.4|ADAM metallopeptidase with thrombospondin type 1 motif, 19
hg19_v2_chr6_-_7313381_7313458	0.0204052	CAGUGCA	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chr13_+_53226963_53227023	0.0195783	CAGUGCA	ENST00000343788.6|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000535397.1|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 	ENST00000310528.8|SUGT1|ENSG00000165416.10|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
hg19_v2_chr6_+_152011628_152011642	0.0193048	CAGUGCA	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr3_+_134204881_134204913	0.019222	CAGUGCA	ENST00000511574.1|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000337090.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000383229.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa
hg19_v2_chrX_-_73834449_73834481	0.0186414	CAGUGCA	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr1_+_68150744_68150890	0.0183615	CAGUGCA	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr15_-_61521495_61521518	0.0182287	CAGUGCA	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr6_-_79787902_79787958	0.0181562	CAGUGCA	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr1_+_70671363_70671428	0.017713	CAGUGCA	ENST00000370951.1|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000370950.3|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000405432.1|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11 	ENST00000454435.2|SRSF11|ENSG00000116754.9|serine/arginine-rich splicing factor 11
hg19_v2_chr6_+_69345166_69345259	0.0176209	CAGUGCA	ENST00000370598.1|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr3_-_105587879_105587892	0.0176162	CAGUGCA	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr4_+_184426147_184426237	0.0175505	CAGUGCA	ENST00000302327.3|ING2|ENSG00000168556.5|inhibitor of growth family, member 2
hg19_v2_chr21_+_35445827_35445886	0.0175444	CAGUGCA	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr4_+_170541660_170541677	0.0173773	CAGUGCA	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chrX_+_149861836_149861883	0.017004	CAGUGCA	ENST00000542156.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000370390.3|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000490316.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000445323.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000544228.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000451863.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr1_-_52344471_52344481	0.016786	CAGUGCA	ENST00000352171.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase) 	ENST00000354831.7|NRD1|ENSG00000078618.15|nardilysin (N-arginine dibasic convertase)
hg19_v2_chr3_+_180630090_180630311	0.0162782	CAGUGCA	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr1_-_67896095_67896106	0.0162705	CAGUGCA	ENST00000370994.4|SERBP1|ENSG00000142864.10|SERPINE1 mRNA binding protein 1
hg19_v2_chr20_+_32581452_32581520	0.0162623	CAGUGCA	ENST00000375114.3|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein 	ENST00000448364.1|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein
hg19_v2_chr19_+_45973120_45973171	0.0160165	CAGUGCA	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr5_+_112312416_112312440	0.0159706	CAGUGCA	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr11_+_34073195_34073266	0.0158689	CAGUGCA	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr20_-_52210368_52210384	0.0158559	CAGUGCA	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr5_+_176560742_176560926	0.0157634	CAGUGCA	ENST00000439151.2|NSD1|ENSG00000165671.14|nuclear receptor binding SET domain protein 1
hg19_v2_chr5_+_7396141_7396324	0.0153715	CAGUGCA	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr19_+_7598890_7599090	0.0153681	CAGUGCA	ENST00000221249.6|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601668.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601001.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr11_+_818902_818924	0.0152786	CAGUGCA	ENST00000336615.4|PNPLA2|ENSG00000177666.11|patatin-like phospholipase domain containing 2
hg19_v2_chr20_+_32399093_32399169	0.0152548	CAGUGCA	ENST00000217402.2|CHMP4B|ENSG00000101421.3|charged multivesicular body protein 4B
hg19_v2_chr2_-_55237484_55237585	0.0152375	CAGUGCA	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr21_-_47706205_47706223	0.0148754	CAGUGCA	ENST00000397708.1|MCM3AP|ENSG00000160294.6|minichromosome maintenance complex component 3 associated protein
hg19_v2_chr1_+_203595903_203595934	0.0144497	CAGUGCA	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr5_+_122110691_122110898	0.0140392	CAGUGCA	ENST00000379516.2|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000505934.1|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000514949.1|SNX2|ENSG00000205302.2|sorting nexin 2
hg19_v2_chr1_+_41249539_41249766	0.0140179	CAGUGCA	ENST00000347132.5|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4 	ENST00000509682.2|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4
hg19_v2_chr1_+_15853308_15853413	0.0138483	CAGUGCA	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr1_-_95007193_95007356	0.0137291	CAGUGCA	ENST00000370207.4|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor) 	ENST00000334047.7|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor)
hg19_v2_chr12_+_104324112_104324196	0.0136628	CAGUGCA	ENST00000299767.5|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chr17_+_26800296_26800314	0.0134097	CAGUGCA	ENST00000444914.3|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 	ENST00000314669.5|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
hg19_v2_chr17_-_62658186_62658231	0.0131748	CAGUGCA	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr17_-_37607497_37607539	0.0131519	CAGUGCA	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr2_+_85132749_85132788	0.013053	CAGUGCA	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr18_-_12657988_12658133	0.0125941	CAGUGCA	ENST00000410092.3|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000409402.4|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1
hg19_v2_chr1_-_179198702_179198741	0.012091	CAGUGCA	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr1_+_100818009_100818072	0.0120418	CAGUGCA	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr12_-_498620_498693	0.0119475	CAGUGCA	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr1_-_153895377_153895465	0.011434	CAGUGCA	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr1_+_224544552_224544570	0.0112724	CAGUGCA	ENST00000465271.1|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4 	ENST00000366858.3|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4
hg19_v2_chr19_+_13135386_13135435	0.0111545	CAGUGCA	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr14_-_68283291_68283323	0.0109482	CAGUGCA	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr17_-_27621125_27621143	0.010594	CAGUGCA	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr17_-_27045165_27045286	0.0105841	CAGUGCA	ENST00000436730.3|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000450529.1|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000583538.1|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000419712.3|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000580843.2|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000582934.1|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000415040.2|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000353676.5|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000453384.3|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family 	ENST00000447716.1|RAB34|ENSG00000109113.13|RAB34, member RAS oncogene family
hg19_v2_chr12_-_56694142_56694178	0.0103267	CAGUGCA	ENST00000550655.1|CS|ENSG00000062485.14|citrate synthase 	ENST00000548567.1|CS|ENSG00000062485.14|citrate synthase 	ENST00000551430.2|CS|ENSG00000062485.14|citrate synthase 	ENST00000351328.3|CS|ENSG00000062485.14|citrate synthase
hg19_v2_chr16_+_86544113_86544145	0.0100656	CAGUGCA	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chr7_+_39989611_39989716	0.0100225	CAGUGCA	ENST00000181839.4|CDK13|ENSG00000065883.10|cyclin-dependent kinase 13
hg19_v2_chr20_+_4666882_4666996	0.0097608	CAGUGCA	ENST00000379440.4|PRNP|ENSG00000171867.12|prion protein 	ENST00000430350.2|PRNP|ENSG00000171867.12|prion protein
hg19_v2_chr17_-_1532106_1532148	0.00969755	CAGUGCA	ENST00000301335.5|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2 	ENST00000382147.4|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr10_-_88281494_88281572	0.00924632	CAGUGCA	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr15_-_41408409_41408552	0.00910685	CAGUGCA	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr6_+_163835669_163835693	0.00883671	CAGUGCA	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_+_161274685_161274747	0.00862632	CAGUGCA	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr6_+_99282570_99282591	0.00850731	CAGUGCA	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr14_+_102606181_102606261	0.00846406	CAGUGCA	ENST00000335263.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000322340.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000424963.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000342702.3|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556807.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000499851.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000558567.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000299135.6|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000454394.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556511.2|WDR20|ENSG00000140153.13|WD repeat domain 20
hg19_v2_chr15_+_44038590_44038651	0.00758458	CAGUGCA	ENST00000300289.5|PDIA3|ENSG00000167004.8|protein disulfide isomerase family A, member 3 	ENST00000538521.1|PDIA3|ENSG00000167004.8|protein disulfide isomerase family A, member 3
hg19_v2_chr10_-_61666267_61666414	0.00745258	CAGUGCA	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr17_-_3794021_3794042	0.00702716	CAGUGCA	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr18_+_60190226_60190314	0.00690513	CAGUGCA	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chrX_+_21958674_21958721	0.0068314	CAGUGCA	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr10_+_98592009_98592061	0.00681123	CAGUGCA	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr15_+_76352178_76352306	0.00634624	CAGUGCA	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr16_-_20911641_20911720	0.00628422	CAGUGCA	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr4_-_68566832_68566897	0.00620462	CAGUGCA	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr1_+_26737253_26737269	0.00597655	CAGUGCA	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr3_-_72496035_72496069	0.0055133	CAGUGCA	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_-_72972319_72972347	0.00517218	CAGUGCA	ENST00000223368.2|BCL7B|ENSG00000106635.3|B-cell CLL/lymphoma 7B
hg19_v2_chr9_+_27109133_27109187	0.00516961	CAGUGCA	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr6_-_116601044_116601106	0.00516569	CAGUGCA	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr20_-_47444420_47444526	0.00512384	CAGUGCA	ENST00000371941.3|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 	ENST00000396220.1|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
hg19_v2_chrX_-_43832711_43832750	0.00509318	CAGUGCA	ENST00000378062.5|NDP|ENSG00000124479.8|Norrie disease (pseudoglioma)
hg19_v2_chr14_+_73603126_73603255	0.00501801	CAGUGCA	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr3_+_178866199_178866311	0.00451425	CAGUGCA	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr13_+_98605902_98605968	0.00431963	CAGUGCA	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr3_+_38206975_38207101	0.00417023	CAGUGCA	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr1_+_36273743_36273773	0.00410327	CAGUGCA	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr10_+_102295616_102295713	0.00377733	CAGUGCA	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr2_+_241508039_241508104	0.00352367	CAGUGCA	ENST00000270357.4|RNPEPL1|ENSG00000142327.7|arginyl aminopeptidase (aminopeptidase B)-like 1
hg19_v2_chr12_+_110719032_110719113	0.00338007	CAGUGCA	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr6_+_44094627_44094662	0.00312314	CAGUGCA	ENST00000259746.9|TMEM63B|ENSG00000137216.14|transmembrane protein 63B
hg19_v2_chr11_+_61717842_61717856	0.00311198	CAGUGCA	ENST00000449131.2|BEST1|ENSG00000167995.11|bestrophin 1
hg19_v2_chr19_-_56135928_56135967	0.00279195	CAGUGCA	ENST00000591479.1|ZNF784|ENSG00000179922.5|zinc finger protein 784 	ENST00000325351.4|ZNF784|ENSG00000179922.5|zinc finger protein 784
hg19_v2_chr17_-_27230035_27230105	0.00277467	CAGUGCA	ENST00000378895.4|DHRS13|ENSG00000167536.9|dehydrogenase/reductase (SDR family) member 13 	ENST00000394901.3|DHRS13|ENSG00000167536.9|dehydrogenase/reductase (SDR family) member 13
hg19_v2_chr10_+_104678032_104678094	0.00277034	CAGUGCA	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chrX_-_63425561_63425624	0.00270828	CAGUGCA	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr7_+_138916231_138916231	0.00266137	CAGUGCA	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr3_-_48723268_48723360	0.00223033	CAGUGCA	ENST00000439518.1|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000416649.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000341520.4|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000294129.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain
hg19_v2_chr12_+_110437328_110437358	0.00163689	CAGUGCA	ENST00000261739.4|ANKRD13A|ENSG00000076513.12|ankyrin repeat domain 13A
hg19_v2_chr7_-_95225768_95225967	0.00157528	CAGUGCA	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr13_-_79233314_79233331	0.00146964	CAGUGCA	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr2_-_190649082_190649102	0.00126773	CAGUGCA	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
hg19_v2_chr16_+_67143880_67144050	0.00106588	CAGUGCA	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr1_+_33005020_33005077	0.00098889	CAGUGCA	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr3_+_5163905_5164039	0.000843899	CAGUGCA	ENST00000256496.3|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B 	ENST00000419534.2|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B
hg19_v2_chr12_-_14133053_14133159	0.000631903	CAGUGCA	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr1_-_43424500_43424546	0.000465875	CAGUGCA	ENST00000415851.2|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1 	ENST00000426263.3|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1 	ENST00000372500.3|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v2_chr4_+_115519577_115519631	0.000239608	CAGUGCA	ENST00000310836.6|UGT8|ENSG00000174607.6|UDP glycosyltransferase 8
