hg19_v2_chr11_+_113930291_113930339	0.776603	GCAGCAU	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr1_-_92351769_92351787	0.671059	GCAGCAU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr5_-_111093406_111093458	0.638372	GCAGCAU	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr5_+_82767284_82767310	0.546955	GCAGCAU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr8_-_120651020_120651091	0.504535	GCAGCAU	ENST00000522826.1|ENPP2|ENSG00000136960.8|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENST00000520066.1|ENPP2|ENSG00000136960.8|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENST00000259486.6|ENPP2|ENSG00000136960.8|ectonucleotide pyrophosphatase/phosphodiesterase 2 	ENST00000075322.6|ENPP2|ENSG00000136960.8|ectonucleotide pyrophosphatase/phosphodiesterase 2
hg19_v2_chr4_+_126237554_126237554	0.480986	GCAGCAU	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr2_+_201170703_201170716	0.466238	GCAGCAU	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr1_+_163039143_163039159	0.452128	GCAGCAU	ENST00000531057.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000527809.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000367908.4|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4
hg19_v2_chr5_-_126366500_126366547	0.447673	GCAGCAU	ENST00000308660.5|MARCH3|ENSG00000173926.5|membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
hg19_v2_chr4_+_124320665_124320702	0.434292	GCAGCAU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr4_+_123747834_123747863	0.423811	GCAGCAU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr1_-_232697304_232697304	0.41521	GCAGCAU	ENST00000366630.1|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr16_+_29823552_29823612	0.384462	GCAGCAU	ENST00000300797.6|PRRT2|ENSG00000167371.12|proline-rich transmembrane protein 2
hg19_v2_chr5_-_158526756_158526797	0.375257	GCAGCAU	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr13_+_93879085_93879136	0.375082	GCAGCAU	ENST00000377047.4|GPC6|ENSG00000183098.6|glypican 6
hg19_v2_chr5_+_67511524_67511628	0.362583	GCAGCAU	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr8_+_37654424_37654436	0.356286	GCAGCAU	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr11_-_82782861_82782949	0.34086	GCAGCAU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr2_-_200322723_200322819	0.326568	GCAGCAU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr8_-_93115445_93115462	0.29091	GCAGCAU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr1_+_78470530_78470551	0.284025	GCAGCAU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr3_-_114790179_114790222	0.268428	GCAGCAU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr5_-_146833485_146833522	0.264975	GCAGCAU	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr10_+_92980517_92980550	0.256791	GCAGCAU	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr17_-_28618948_28619023	0.251443	GCAGCAU	ENST00000261714.6|BLMH|ENSG00000108578.10|bleomycin hydrolase
hg19_v2_chr4_+_26585538_26585680	0.248334	GCAGCAU	ENST00000264866.4|TBC1D19|ENSG00000109680.6|TBC1 domain family, member 19
hg19_v2_chr14_-_53417732_53417815	0.248007	GCAGCAU	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr4_-_2264015_2264041	0.235668	GCAGCAU	ENST00000337190.2|MXD4|ENSG00000123933.10|MAX dimerization protein 4
hg19_v2_chr17_-_63557759_63557774	0.227531	GCAGCAU	ENST00000307078.5|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr7_+_95401851_95401876	0.226704	GCAGCAU	ENST00000447467.2|DYNC1I1|ENSG00000158560.10|dynein, cytoplasmic 1, intermediate chain 1
hg19_v2_chrX_-_34675391_34675411	0.218743	GCAGCAU	ENST00000275954.3|TMEM47|ENSG00000147027.3|transmembrane protein 47
hg19_v2_chr1_+_201617450_201617465	0.217321	GCAGCAU	ENST00000295624.6|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367297.4|NAV1|ENSG00000134369.11|neuron navigator 1 	ENST00000367300.3|NAV1|ENSG00000134369.11|neuron navigator 1
hg19_v2_chr14_+_29234870_29235050	0.21446	GCAGCAU	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr1_-_84464780_84464862	0.207949	GCAGCAU	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr3_+_191046810_191046874	0.194894	GCAGCAU	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr5_-_137368708_137368721	0.194584	GCAGCAU	ENST00000033079.3|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr9_+_91003271_91003386	0.189821	GCAGCAU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr20_-_3996036_3996153	0.188149	GCAGCAU	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr14_-_53258314_53258418	0.182845	GCAGCAU	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr1_+_64239657_64239724	0.179658	GCAGCAU	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr15_+_89631381_89631391	0.17342	GCAGCAU	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr6_+_151561085_151561146	0.173153	GCAGCAU	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr12_-_6580094_6580153	0.167884	GCAGCAU	ENST00000361716.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr8_-_82024290_82024310	0.166557	GCAGCAU	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr9_+_92219919_92219953	0.164108	GCAGCAU	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr7_+_90225796_90225811	0.159269	GCAGCAU	ENST00000380050.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr10_-_88854518_88854634	0.15863	GCAGCAU	ENST00000277865.4|GLUD1|ENSG00000148672.7|glutamate dehydrogenase 1
hg19_v2_chr14_+_53196872_53196959	0.155495	GCAGCAU	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr3_+_119187785_119187863	0.154118	GCAGCAU	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr3_+_137906109_137906153	0.153003	GCAGCAU	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr9_-_116163400_116163613	0.150144	GCAGCAU	ENST00000277315.5|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000448137.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000409155.3|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr3_+_152017181_152017229	0.150072	GCAGCAU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr17_+_27717415_27717618	0.149408	GCAGCAU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr16_-_90038866_90038942	0.148102	GCAGCAU	ENST00000314994.3|CENPBD1|ENSG00000177946.4|CENPB DNA-binding domains containing 1
hg19_v2_chr12_+_66217911_66218018	0.143664	GCAGCAU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr2_-_40679186_40679297	0.136989	GCAGCAU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr20_+_30865429_30865480	0.135272	GCAGCAU	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr8_-_12612962_12613049	0.134097	GCAGCAU	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr4_-_99579733_99579789	0.132338	GCAGCAU	ENST00000305798.3|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chrX_+_30671476_30671655	0.129874	GCAGCAU	ENST00000378946.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378943.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378945.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000427190.1|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378941.3|GK|ENSG00000198814.8|glycerol kinase
hg19_v2_chr8_+_81397876_81397902	0.128395	GCAGCAU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr9_-_127905736_127905815	0.125039	GCAGCAU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr2_+_45878790_45878913	0.123913	GCAGCAU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr8_+_38614807_38614851	0.121578	GCAGCAU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr1_+_10271674_10271674	0.121193	GCAGCAU	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr12_-_120884175_120884218	0.119814	GCAGCAU	ENST00000546954.1|TRIAP1|ENSG00000170855.3|TP53 regulated inhibitor of apoptosis 1
hg19_v2_chr6_-_90062543_90062567	0.116803	GCAGCAU	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr9_+_112542572_112542590	0.114084	GCAGCAU	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chrX_+_72783026_72783049	0.112727	GCAGCAU	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr20_-_5591626_5591677	0.112386	GCAGCAU	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr9_+_112810878_112810985	0.110832	GCAGCAU	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr10_+_54074033_54074056	0.110446	GCAGCAU	ENST00000373970.3|DKK1|ENSG00000107984.5|dickkopf WNT signaling pathway inhibitor 1
hg19_v2_chr22_-_17602200_17602265	0.110346	GCAGCAU	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr22_+_50781723_50781784	0.110274	GCAGCAU	ENST00000359139.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395741.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395744.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2
hg19_v2_chr8_-_57123815_57123867	0.109023	GCAGCAU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr5_-_59189545_59189625	0.109009	GCAGCAU	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr8_-_67525473_67525518	0.108878	GCAGCAU	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr17_-_1465924_1466129	0.108196	GCAGCAU	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr3_-_15374033_15374136	0.107613	GCAGCAU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr20_-_39928705_39928740	0.10734	GCAGCAU	ENST00000436099.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000309060.3|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000373261.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000436440.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000540170.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000557816.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3 	ENST00000560361.1|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr1_+_26146397_26146499	0.107004	GCAGCAU	ENST00000374303.2|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000533762.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000529116.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000474295.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000488327.2|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000472643.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000526894.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000524618.1|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like 	ENST00000374307.5|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like
hg19_v2_chr11_+_77300669_77300714	0.106379	GCAGCAU	ENST00000313578.3|AQP11|ENSG00000178301.3|aquaporin 11
hg19_v2_chr2_+_204192942_204193038	0.106334	GCAGCAU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr3_-_164913777_164913790	0.104698	GCAGCAU	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr10_+_90639491_90639491	0.104659	GCAGCAU	ENST00000371926.3|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1 	ENST00000371927.3|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chrX_-_102757802_102757810	0.104412	GCAGCAU	ENST00000372633.1|RAB40A|ENSG00000172476.3|RAB40A, member RAS oncogene family
hg19_v2_chr2_-_219925189_219925189	0.104304	GCAGCAU	ENST00000295731.6|IHH|ENSG00000163501.6|indian hedgehog
hg19_v2_chr10_-_15210666_15210707	0.104055	GCAGCAU	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr17_-_38804061_38804112	0.102778	GCAGCAU	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr14_-_69619823_69619879	0.102705	GCAGCAU	ENST00000341516.5|DCAF5|ENSG00000139990.13|DDB1 and CUL4 associated factor 5
hg19_v2_chr1_-_150849208_150849244	0.102642	GCAGCAU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr17_+_40834580_40834633	0.0994761	GCAGCAU	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr2_+_101436564_101436647	0.0989568	GCAGCAU	ENST00000335681.5|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr3_+_88188254_88188254	0.0985976	GCAGCAU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr5_+_102455853_102455961	0.0964497	GCAGCAU	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr9_-_36400213_36400296	0.095204	GCAGCAU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr9_-_91793675_91793698	0.0944679	GCAGCAU	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chr14_+_55518349_55518423	0.0942383	GCAGCAU	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr17_+_55333876_55333939	0.0917802	GCAGCAU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr2_+_120517174_120517207	0.0915026	GCAGCAU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr12_-_110434021_110434034	0.0914041	GCAGCAU	ENST00000355312.3|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000551209.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000550186.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chrX_+_118108571_118108589	0.0909503	GCAGCAU	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr10_+_60936347_60936358	0.0901172	GCAGCAU	ENST00000373880.4|PHYHIPL|ENSG00000165443.7|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg19_v2_chr17_+_61699766_61699826	0.0898307	GCAGCAU	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr1_+_61547894_61547980	0.0891669	GCAGCAU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_+_26798955_26799010	0.0888419	GCAGCAU	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr1_+_78245303_78245351	0.0886556	GCAGCAU	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr7_-_105517021_105517050	0.0872937	GCAGCAU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_+_162467595_162467655	0.0856276	GCAGCAU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr4_-_69215699_69215815	0.0851656	GCAGCAU	ENST00000510746.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000344157.4|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000355665.3|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr12_-_65146636_65146651	0.0848808	GCAGCAU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr10_+_72164135_72164135	0.0845816	GCAGCAU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr5_+_172483347_172483407	0.0843037	GCAGCAU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_-_132299313_132299334	0.0839472	GCAGCAU	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_+_36396677_36396749	0.0838648	GCAGCAU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr9_-_110251836_110251927	0.0830055	GCAGCAU	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr9_-_123639600_123639627	0.0827163	GCAGCAU	ENST00000373896.3|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr10_+_103113802_103113820	0.0821467	GCAGCAU	ENST00000370187.3|BTRC|ENSG00000166167.13|beta-transducin repeat containing E3 ubiquitin protein ligase
hg19_v2_chr4_+_6784401_6784510	0.0806157	GCAGCAU	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr2_-_172017343_172017391	0.0803924	GCAGCAU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr20_+_8112824_8112925	0.0794019	GCAGCAU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr2_+_170683942_170683972	0.0791361	GCAGCAU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr15_-_61521495_61521518	0.0781156	GCAGCAU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr3_+_57261743_57261824	0.0774118	GCAGCAU	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr9_-_113342160_113342214	0.0770473	GCAGCAU	ENST00000401783.2|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 	ENST00000374461.1|SVEP1|ENSG00000165124.13|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
hg19_v2_chr9_+_82186872_82186898	0.0764991	GCAGCAU	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr3_-_72496035_72496069	0.0762796	GCAGCAU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_+_99613195_99613206	0.0737526	GCAGCAU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr22_+_40573921_40573946	0.0733621	GCAGCAU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr17_+_2240775_2240812	0.0725752	GCAGCAU	ENST00000268989.3|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2 	ENST00000426855.2|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chr1_-_171711387_171711420	0.0722709	GCAGCAU	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr4_-_78740511_78740544	0.0710079	GCAGCAU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr18_+_72922710_72922733	0.0709969	GCAGCAU	ENST00000322038.5|TSHZ1|ENSG00000179981.9|teashirt zinc finger homeobox 1
hg19_v2_chr16_+_69345243_69345312	0.0709327	GCAGCAU	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr10_-_75910789_75910821	0.0708412	GCAGCAU	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr1_+_36273743_36273773	0.0690308	GCAGCAU	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr5_+_76506706_76506787	0.0690224	GCAGCAU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chrX_-_19988382_19988416	0.0680605	GCAGCAU	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr9_+_17579084_17579128	0.0676044	GCAGCAU	ENST00000380607.4|SH3GL2|ENSG00000107295.8|SH3-domain GRB2-like 2
hg19_v2_chr14_-_57735528_57735726	0.067014	GCAGCAU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chrX_-_118827333_118827365	0.0662028	GCAGCAU	ENST00000360156.7|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354228.4|SEPT6|ENSG00000125354.18|septin 6 	ENST00000489216.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354416.3|SEPT6|ENSG00000125354.18|septin 6 	ENST00000394610.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000343984.5|SEPT6|ENSG00000125354.18|septin 6
hg19_v2_chr7_+_32535060_32535322	0.0652378	GCAGCAU	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr8_+_59465728_59465826	0.0649546	GCAGCAU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr12_-_81331697_81331733	0.0647841	GCAGCAU	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr12_-_27167233_27167367	0.0646636	GCAGCAU	ENST00000535819.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543803.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000535423.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000539741.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000343028.4|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000545600.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543088.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3
hg19_v2_chr4_-_76598296_76598318	0.064507	GCAGCAU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr6_+_69345166_69345259	0.0636123	GCAGCAU	ENST00000370598.1|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr14_-_61190754_61190852	0.0627397	GCAGCAU	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr18_+_905104_905118	0.0626401	GCAGCAU	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr4_+_174089904_174089921	0.0616625	GCAGCAU	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr8_+_23430157_23430157	0.0616148	GCAGCAU	ENST00000399967.3|FP15737|ENSG00000215298.3|FP15737
hg19_v2_chr2_+_166095898_166095940	0.0608868	GCAGCAU	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr5_+_122181184_122181213	0.0606059	GCAGCAU	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr16_+_69599861_69599887	0.0591403	GCAGCAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr6_+_34204642_34204664	0.056211	GCAGCAU	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr17_-_73975444_73975528	0.0560517	GCAGCAU	ENST00000293217.5|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl 	ENST00000537812.1|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl
hg19_v2_chr17_-_74236382_74236454	0.0555868	GCAGCAU	ENST00000592271.1|RNF157|ENSG00000141576.10|ring finger protein 157 	ENST00000319945.6|RNF157|ENSG00000141576.10|ring finger protein 157 	ENST00000269391.6|RNF157|ENSG00000141576.10|ring finger protein 157
hg19_v2_chr10_-_61666267_61666414	0.0550102	GCAGCAU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr17_-_65241281_65241326	0.0549794	GCAGCAU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr12_-_6809958_6809996	0.053219	GCAGCAU	ENST00000320591.5|PIANP|ENSG00000139200.9|PILR alpha associated neural protein 	ENST00000534837.1|PIANP|ENSG00000139200.9|PILR alpha associated neural protein
hg19_v2_chr16_-_66785699_66785759	0.0528896	GCAGCAU	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr1_-_120612240_120612288	0.0528208	GCAGCAU	ENST00000256646.2|NOTCH2|ENSG00000134250.13|notch 2
hg19_v2_chr12_+_57522258_57522313	0.0527326	GCAGCAU	ENST00000553277.1|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1 	ENST00000243077.3|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr2_-_47168906_47168994	0.0519976	GCAGCAU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr3_-_176914238_176914277	0.0510242	GCAGCAU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr1_-_39325431_39325495	0.0507786	GCAGCAU	ENST00000373001.3|RRAGC|ENSG00000116954.7|Ras-related GTP binding C
hg19_v2_chr15_+_41952591_41952672	0.050112	GCAGCAU	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr2_+_235860616_235860645	0.0497169	GCAGCAU	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chr8_-_71316021_71316068	0.0496694	GCAGCAU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chrX_-_70288234_70288291	0.0495106	GCAGCAU	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr18_+_2655692_2655737	0.0493044	GCAGCAU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr3_-_88108192_88108203	0.0492271	GCAGCAU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr10_-_119806085_119806114	0.0486672	GCAGCAU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr9_-_127952032_127952098	0.0478056	GCAGCAU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr22_+_41697520_41697613	0.0469971	GCAGCAU	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr1_-_173991434_173991556	0.0467219	GCAGCAU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr3_-_48130707_48130789	0.0464509	GCAGCAU	ENST00000360240.6|MAP4|ENSG00000047849.17|microtubule-associated protein 4 	ENST00000383737.4|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr12_+_105501487_105501562	0.0448128	GCAGCAU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr4_+_48343339_48343414	0.0447438	GCAGCAU	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr12_+_104458235_104458344	0.0442729	GCAGCAU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr1_-_52831796_52831882	0.0436293	GCAGCAU	ENST00000284376.3|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B 	ENST00000438831.1|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B 	ENST00000371586.2|CC2D1B|ENSG00000154222.10|coiled-coil and C2 domain containing 1B
hg19_v2_chr9_-_14314066_14314075	0.0429665	GCAGCAU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr22_+_32340481_32340510	0.0428715	GCAGCAU	ENST00000397492.1|YWHAH|ENSG00000128245.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
hg19_v2_chr2_+_208576355_208576475	0.0426563	GCAGCAU	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr5_-_132948216_132948255	0.0423269	GCAGCAU	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr11_-_62689046_62689279	0.0416824	GCAGCAU	ENST00000306960.3|CHRM1|ENSG00000168539.3|cholinergic receptor, muscarinic 1 	ENST00000543973.1|CHRM1|ENSG00000168539.3|cholinergic receptor, muscarinic 1
hg19_v2_chr1_-_151300160_151300196	0.0409828	GCAGCAU	ENST00000368874.4|PI4KB|ENSG00000143393.12|phosphatidylinositol 4-kinase, catalytic, beta
hg19_v2_chr17_+_29421900_29421951	0.0402373	GCAGCAU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chrX_+_95939711_95939786	0.0390061	GCAGCAU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr1_-_240775447_240775462	0.0386241	GCAGCAU	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr22_-_41864662_41864729	0.038209	GCAGCAU	ENST00000216252.3|PHF5A|ENSG00000100410.3|PHD finger protein 5A
hg19_v2_chr3_-_194090460_194090479	0.0370535	GCAGCAU	ENST00000428839.1|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15 	ENST00000347624.3|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15
hg19_v2_chr17_-_71228357_71228533	0.0369531	GCAGCAU	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr15_+_85923856_85923987	0.0365543	GCAGCAU	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr20_+_1099233_1099315	0.0361741	GCAGCAU	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chr18_-_30716038_30716056	0.0360465	GCAGCAU	ENST00000581852.1|CCDC178|ENSG00000166960.12|coiled-coil domain containing 178
hg19_v2_chr10_-_100995540_100995559	0.0359848	GCAGCAU	ENST00000370546.1|HPSE2|ENSG00000172987.8|heparanase 2 	ENST00000404542.1|HPSE2|ENSG00000172987.8|heparanase 2
hg19_v2_chr12_+_68042495_68042508	0.0357082	GCAGCAU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr1_-_153895377_153895465	0.0349592	GCAGCAU	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr16_-_20911641_20911720	0.0343789	GCAGCAU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr13_+_27131887_27131899	0.0342047	GCAGCAU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr8_+_106330920_106330979	0.033778	GCAGCAU	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr20_+_34359905_34359991	0.0337356	GCAGCAU	ENST00000374012.3|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000439301.1|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000339089.6|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000374000.4|PHF20|ENSG00000025293.11|PHD finger protein 20
hg19_v2_chr6_-_11232891_11232915	0.033563	GCAGCAU	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr3_+_152879985_152880038	0.0334504	GCAGCAU	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr2_+_170440844_170440897	0.033374	GCAGCAU	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chrX_+_134478706_134478736	0.0329969	GCAGCAU	ENST00000370761.3|ZNF449|ENSG00000173275.8|zinc finger protein 449 	ENST00000339249.4|ZNF449|ENSG00000173275.8|zinc finger protein 449 	ENST00000370760.3|ZNF449|ENSG00000173275.8|zinc finger protein 449
hg19_v2_chrX_-_107975917_107975917	0.0326347	GCAGCAU	ENST00000563887.1|RP6-24A23.6|ENSG00000260548.1|Uncharacterized protein
hg19_v2_chr11_+_75273101_75273234	0.0322791	GCAGCAU	ENST00000533603.1|SERPINH1|ENSG00000149257.9|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 	ENST00000358171.3|SERPINH1|ENSG00000149257.9|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 	ENST00000526242.1|SERPINH1|ENSG00000149257.9|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
hg19_v2_chr9_+_129622904_129622956	0.0322107	GCAGCAU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr19_-_49314269_49314293	0.0319904	GCAGCAU	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr2_-_33824336_33824378	0.0319485	GCAGCAU	ENST00000431950.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000403368.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000441530.2|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A
hg19_v2_chr9_+_108006880_108006943	0.031734	GCAGCAU	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chrX_-_131352152_131352204	0.031629	GCAGCAU	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr17_-_4167142_4167281	0.0312923	GCAGCAU	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr4_-_129208940_129208976	0.0311779	GCAGCAU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr1_+_113615794_113615884	0.0307086	GCAGCAU	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr17_-_45266542_45266683	0.0300694	GCAGCAU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr2_-_68479614_68479685	0.0297232	GCAGCAU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr7_-_55640176_55640228	0.0296529	GCAGCAU	ENST00000285279.5|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr6_-_24721054_24721074	0.0291981	GCAGCAU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr12_-_42632016_42632089	0.0291359	GCAGCAU	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr3_+_30648066_30648167	0.0284147	GCAGCAU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr13_-_30424821_30424847	0.0282647	GCAGCAU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chrX_-_41782249_41782287	0.0280524	GCAGCAU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr12_+_53399942_53400071	0.0275425	GCAGCAU	ENST00000262056.9|EIF4B|ENSG00000063046.13|eukaryotic translation initiation factor 4B
hg19_v2_chr12_-_49351148_49351222	0.0267746	GCAGCAU	ENST00000398092.4|RP11-302B13.5|ENSG00000272822.1|ADP-ribosylation factor 3  	ENST00000539611.1|ARF3|ENSG00000134287.5|ADP-ribosylation factor 3
hg19_v2_chr16_-_25026641_25026698	0.0264872	GCAGCAU	ENST00000289968.6|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000303665.5|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000455311.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000441763.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chrX_+_110339439_110339605	0.0263389	GCAGCAU	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr6_+_71276596_71276649	0.0261619	GCAGCAU	ENST00000370474.3|C6orf57|ENSG00000154079.5|chromosome 6 open reading frame 57
hg19_v2_chr6_-_117923520_117923529	0.0260481	GCAGCAU	ENST00000368498.2|GOPC|ENSG00000047932.9|golgi-associated PDZ and coiled-coil motif containing
hg19_v2_chr17_-_42580738_42580798	0.0252977	GCAGCAU	ENST00000585614.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000591680.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000434000.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000588554.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000592154.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8
hg19_v2_chr10_+_89622870_89622870	0.0249752	GCAGCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr1_-_20812690_20812763	0.0244347	GCAGCAU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr9_-_37576226_37576250	0.0242911	GCAGCAU	ENST00000432825.2|FBXO10|ENSG00000147912.8|F-box protein 10
hg19_v2_chr3_-_112218378_112218418	0.0240768	GCAGCAU	ENST00000334529.5|BTLA|ENSG00000186265.5|B and T lymphocyte associated
hg19_v2_chr12_+_3186521_3186575	0.0238426	GCAGCAU	ENST00000537971.1|TSPAN9|ENSG00000011105.7|tetraspanin 9 	ENST00000011898.5|TSPAN9|ENSG00000011105.7|tetraspanin 9
hg19_v2_chr18_+_158513_158608	0.0234285	GCAGCAU	ENST00000400266.3|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000580410.1|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000383589.2|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 	ENST00000261601.7|USP14|ENSG00000101557.10|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)
hg19_v2_chr9_+_115513003_115513137	0.0224131	GCAGCAU	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr3_-_122233723_122233797	0.0223628	GCAGCAU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr7_+_91875508_91875559	0.022009	GCAGCAU	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chr8_-_23315190_23315235	0.0219425	GCAGCAU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr11_+_109964087_109964123	0.0219384	GCAGCAU	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr1_-_155532484_155532605	0.0216961	GCAGCAU	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr5_+_179159813_179159851	0.0205426	GCAGCAU	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr3_-_136471204_136471249	0.0204514	GCAGCAU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr12_+_22778009_22778112	0.0203708	GCAGCAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr1_+_176432298_176432319	0.0202363	GCAGCAU	ENST00000367661.3|PAPPA2|ENSG00000116183.6|pappalysin 2 	ENST00000367662.3|PAPPA2|ENSG00000116183.6|pappalysin 2
hg19_v2_chr5_+_139493665_139493718	0.0201112	GCAGCAU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr9_+_15553055_15553101	0.0198475	GCAGCAU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr8_+_23386305_23386318	0.0195315	GCAGCAU	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr1_-_36235529_36235543	0.0194883	GCAGCAU	ENST00000318121.3|CLSPN|ENSG00000092853.9|claspin 	ENST00000373220.3|CLSPN|ENSG00000092853.9|claspin 	ENST00000520551.1|CLSPN|ENSG00000092853.9|claspin
hg19_v2_chr3_-_45017609_45017687	0.0194843	GCAGCAU	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr17_-_37557846_37557920	0.0192807	GCAGCAU	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr16_-_74700737_74700804	0.0191004	GCAGCAU	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr7_+_155250824_155250824	0.0185726	GCAGCAU	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr17_-_35969409_35969544	0.0184662	GCAGCAU	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr4_+_148538517_148538592	0.018217	GCAGCAU	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr1_-_70671216_70671303	0.0178271	GCAGCAU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr6_+_158733692_158733692	0.0175775	GCAGCAU	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr1_+_26438289_26438352	0.0175287	GCAGCAU	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr12_+_862089_862343	0.0168561	GCAGCAU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr1_+_33005020_33005077	0.016069	GCAGCAU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr7_-_44924939_44924993	0.0160319	GCAGCAU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr2_-_24149977_24150007	0.0149503	GCAGCAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr8_-_74791051_74791145	0.0148382	GCAGCAU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr17_-_3794021_3794042	0.0147879	GCAGCAU	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr12_+_8185288_8185339	0.0145963	GCAGCAU	ENST00000162391.3|FOXJ2|ENSG00000065970.4|forkhead box J2
hg19_v2_chr11_+_56949221_56949221	0.0142663	GCAGCAU	ENST00000497933.1|LRRC55|ENSG00000183908.5|leucine rich repeat containing 55
hg19_v2_chr4_+_52709229_52709345	0.0142238	GCAGCAU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr7_+_116502527_116502558	0.0140318	GCAGCAU	ENST00000361183.3|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr1_-_205601064_205601090	0.0137531	GCAGCAU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr19_-_47975417_47975441	0.0137229	GCAGCAU	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr7_-_66460563_66460605	0.0136874	GCAGCAU	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr12_-_49449107_49449107	0.0131451	GCAGCAU	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr3_-_49907323_49907374	0.0127065	GCAGCAU	ENST00000296471.7|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000488336.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000467248.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000466940.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000463537.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000480398.2|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated
hg19_v2_chr1_+_11072696_11072735	0.0125715	GCAGCAU	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr17_+_38219063_38219154	0.0122011	GCAGCAU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr4_+_57774042_57774114	0.0121979	GCAGCAU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr16_-_70472946_70473024	0.0121277	GCAGCAU	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr20_-_40247133_40247194	0.0120306	GCAGCAU	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr5_+_5422778_5422841	0.0118169	GCAGCAU	ENST00000296564.7|KIAA0947|ENSG00000164151.7|KIAA0947
hg19_v2_chr17_+_46184911_46184951	0.011296	GCAGCAU	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr20_-_50159198_50159299	0.0112465	GCAGCAU	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr13_-_50367057_50367142	0.0109643	GCAGCAU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr1_-_23495340_23495357	0.0105564	GCAGCAU	ENST00000418342.1|LUZP1|ENSG00000169641.9|leucine zipper protein 1
hg19_v2_chr12_-_22697343_22697500	0.0105395	GCAGCAU	ENST00000446597.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000536386.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000396028.2|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000545552.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000544930.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000333957.4|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5
hg19_v2_chr3_+_47324424_47324447	0.0100287	GCAGCAU	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr9_+_4679555_4679617	0.00987034	GCAGCAU	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr5_-_137878887_137878989	0.00974969	GCAGCAU	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chrX_-_112084043_112084071	0.00949076	GCAGCAU	ENST00000304758.1|AMOT|ENSG00000126016.9|angiomotin
hg19_v2_chr5_-_162887071_162887166	0.00941123	GCAGCAU	ENST00000302764.4|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr8_+_96145974_96146041	0.00925782	GCAGCAU	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr16_-_20364030_20364038	0.00912895	GCAGCAU	ENST00000396134.2|UMOD|ENSG00000169344.11|uromodulin 	ENST00000573567.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000570757.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000424589.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000302509.4|UMOD|ENSG00000169344.11|uromodulin 	ENST00000571174.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000576688.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr6_+_155054459_155054561	0.0090614	GCAGCAU	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr3_+_196594727_196594816	0.00877152	GCAGCAU	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr1_-_24306798_24306828	0.00871704	GCAGCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr22_-_39096661_39096681	0.00812673	GCAGCAU	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr17_-_56595196_56595266	0.00785971	GCAGCAU	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr1_+_110091189_110091268	0.00777186	GCAGCAU	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr15_+_75287861_75287961	0.00773814	GCAGCAU	ENST00000425597.3|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562327.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000568018.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562212.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000567920.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000566872.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000361900.6|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000545456.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5
hg19_v2_chr12_+_122242597_122242638	0.00750208	GCAGCAU	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr13_-_21635631_21635744	0.00736342	GCAGCAU	ENST00000382592.4|LATS2|ENSG00000150457.7|large tumor suppressor kinase 2
hg19_v2_chr10_-_79686284_79686527	0.0071515	GCAGCAU	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr1_+_93913713_93913839	0.00677897	GCAGCAU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr1_-_38325256_38325292	0.00677582	GCAGCAU	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr13_-_107187462_107187462	0.00610955	GCAGCAU	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chrX_+_102192200_102192200	0.00609204	GCAGCAU	ENST00000218249.5|RAB40AL|ENSG00000102128.6|RAB40A, member RAS oncogene family-like
hg19_v2_chr18_+_55018044_55018044	0.00593235	GCAGCAU	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr12_-_117799446_117799582	0.00583594	GCAGCAU	ENST00000317775.6|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal) 	ENST00000344089.3|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal)
hg19_v2_chr7_+_128379346_128379447	0.00560499	GCAGCAU	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr2_-_85829811_85829828	0.0055381	GCAGCAU	ENST00000306353.3|TMEM150A|ENSG00000168890.9|transmembrane protein 150A
hg19_v2_chr14_+_102228123_102228237	0.00527386	GCAGCAU	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr5_+_65440032_65440099	0.00520765	GCAGCAU	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr9_-_72287191_72287222	0.00520764	GCAGCAU	ENST00000265381.4|APBA1|ENSG00000107282.5|amyloid beta (A4) precursor protein-binding, family A, member 1
hg19_v2_chr20_+_33814457_33814506	0.00517956	GCAGCAU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr2_+_179059365_179059376	0.00498744	GCAGCAU	ENST00000190611.4|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chr12_-_56652111_56652183	0.00479516	GCAGCAU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr2_-_37193606_37193633	0.00454659	GCAGCAU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr3_-_160283348_160283376	0.00434279	GCAGCAU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr12_+_57943781_57943869	0.00424972	GCAGCAU	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr11_-_13517565_13517728	0.00310396	GCAGCAU	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chrX_+_70752917_70752933	0.00265692	GCAGCAU	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr18_+_19321281_19321334	0.00264206	GCAGCAU	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr5_+_170846640_170846660	0.00195223	GCAGCAU	ENST00000274625.5|FGF18|ENSG00000156427.7|fibroblast growth factor 18
hg19_v2_chr13_+_20532807_20532841	0.00189847	GCAGCAU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr15_-_28567298_28567298	0.00175591	GCAGCAU	ENST00000261609.7|HERC2|ENSG00000128731.11|HECT and RLD domain containing E3 ubiquitin protein ligase 2
hg19_v2_chrX_+_21958674_21958721	0.00143315	GCAGCAU	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr22_+_45559722_45559881	0.000774718	GCAGCAU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr12_-_44200052_44200136	0.0006474	GCAGCAU	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr9_+_115249100_115249358	0.000559804	GCAGCAU	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr5_-_148930960_148931013	0.000224035	GCAGCAU	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr17_+_30264014_30264086	0.000219131	GCAGCAU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr2_+_149632783_149632820	0.000208846	GCAGCAU	ENST00000435030.1|KIF5C|ENSG00000168280.12|kinesin family member 5C
