hg19_v2_chr11_-_118550346_118550364	2.91037	GLI2	ENST00000530256.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr11_-_118550375_118550407	2.54695	GLI2	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr3_+_45067659_45067675	2.15363	GLI2	ENST00000296130.4|CLEC3B|ENSG00000163815.5|C-type lectin domain family 3, member B
hg19_v2_chr5_-_9546180_9546195	1.89145	GLI2	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr9_+_90112767_90112808	1.55653	GLI2	ENST00000408954.3|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr21_-_45079341_45079400	1.5477	GLI2	ENST00000443485.1|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein 	ENST00000291560.2|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein
hg19_v2_chr9_+_90112741_90112761	1.44359	GLI2	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr4_-_57524061_57524074	1.41712	GLI2	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chrX_-_51812268_51812368	1.39662	GLI2	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr12_-_56101647_56101699	1.38609	GLI2	ENST00000347027.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257879.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257880.7|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394230.2|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394229.2|ITGA7|ENSG00000135424.11|integrin, alpha 7
hg19_v2_chrX_-_107019181_107019488	1.31112	GLI2	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr16_+_2880157_2880210	1.29801	GLI2	ENST00000382280.3|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr16_+_2880369_2880430	1.17396	GLI2	ENST00000572863.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr14_-_52535712_52535753	1.13925	GLI2	ENST00000216286.5|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen) 	ENST00000541773.1|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen)
hg19_v2_chrX_+_51927919_51927991	1.11994	GLI2	ENST00000416960.1|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chrX_+_51928002_51928017	1.0768	GLI2	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr9_+_4490394_4490446	1.06608	GLI2	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr2_+_201450591_201450680	1.04333	GLI2	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr16_+_2880254_2880278	1.0112	GLI2	ENST00000570670.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr22_-_24622080_24622080	0.999029	GLI2	ENST00000425408.1|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5
hg19_v2_chr16_+_2880296_2880310	0.978923	GLI2	ENST00000571723.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr2_+_128175997_128176020	0.978838	GLI2	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr2_+_128180842_128180878	0.935135	GLI2	ENST00000402125.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr6_+_72596604_72596727	0.913163	GLI2	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr6_+_72596406_72596454	0.822312	GLI2	ENST00000491071.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr16_+_88493879_88493879	0.811575	GLI2	ENST00000565624.1|ZNF469|ENSG00000225614.2|zinc finger protein 469 	ENST00000437464.1|ZNF469|ENSG00000225614.2|zinc finger protein 469
hg19_v2_chr10_-_49701686_49701697	0.800699	GLI2	ENST00000417247.2|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr17_-_73761222_73761317	0.780244	GLI2	ENST00000437911.1|GALK1|ENSG00000108479.7|galactokinase 1 	ENST00000225614.2|GALK1|ENSG00000108479.7|galactokinase 1
hg19_v2_chr22_-_32651326_32651340	0.774451	GLI2	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr5_-_178054014_178054096	0.773434	GLI2	ENST00000520957.1|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr2_-_175869936_175869954	0.771268	GLI2	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr4_+_62067860_62067900	0.768099	GLI2	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr17_+_41158742_41158822	0.744836	GLI2	ENST00000415816.2|IFI35|ENSG00000068079.3|interferon-induced protein 35 	ENST00000438323.2|IFI35|ENSG00000068079.3|interferon-induced protein 35
hg19_v2_chr17_+_81037473_81037567	0.741658	GLI2	ENST00000320095.7|METRNL|ENSG00000176845.8|meteorin, glial cell differentiation regulator-like
hg19_v2_chr11_+_124609823_124609941	0.740929	GLI2	ENST00000412681.2|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr7_-_47579188_47579231	0.721483	GLI2	ENST00000398879.1|TNS3|ENSG00000136205.12|tensin 3 	ENST00000355730.3|TNS3|ENSG00000136205.12|tensin 3 	ENST00000442536.2|TNS3|ENSG00000136205.12|tensin 3 	ENST00000458317.2|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr10_-_38265517_38265591	0.71766	GLI2	ENST00000302609.7|ZNF25|ENSG00000175395.11|zinc finger protein 25
hg19_v2_chr5_+_140718396_140718539	0.71577	GLI2	ENST00000394576.2|PCDHGA2|ENSG00000081853.13|protocadherin gamma subfamily A, 2
hg19_v2_chr19_+_18208603_18208614	0.711923	GLI2	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr20_-_30310656_30310685	0.698184	GLI2	ENST00000376055.4|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr22_+_20008595_20008644	0.692444	GLI2	ENST00000398042.2|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000450664.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000327374.4|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000432883.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila)
hg19_v2_chr20_-_30310693_30310719	0.686797	GLI2	ENST00000307677.4|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420653.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr7_-_131241361_131241398	0.68638	GLI2	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr9_-_113800341_113800373	0.671392	GLI2	ENST00000358883.4|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chrX_-_106960285_106960365	0.640314	GLI2	ENST00000503515.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372397.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr12_+_4671352_4671390	0.611582	GLI2	ENST00000542744.1|DYRK4|ENSG00000010219.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
hg19_v2_chr2_+_11295624_11295735	0.611094	GLI2	ENST00000402361.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3 	ENST00000428481.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3
hg19_v2_chr16_+_67063262_67063364	0.599853	GLI2	ENST00000565389.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr5_-_176924562_176924611	0.599052	GLI2	ENST00000359895.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000355572.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000355841.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000393551.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000505074.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000356618.4|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000393546.4|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr3_+_54157480_54157547	0.597978	GLI2	ENST00000490478.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr9_-_113800317_113800328	0.590433	GLI2	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr11_-_74109422_74109518	0.586038	GLI2	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr15_+_41913690_41913753	0.585323	GLI2	ENST00000563576.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr10_+_104503727_104503748	0.584574	GLI2	ENST00000448841.1|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr15_-_93616892_93616939	0.576219	GLI2	ENST00000556658.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000538818.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000425933.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr19_+_41117770_41117817	0.575742	GLI2	ENST00000601032.1|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr3_+_49449636_49449652	0.574476	GLI2	ENST00000273590.3|TCTA|ENSG00000145022.4|T-cell leukemia translocation altered
hg19_v2_chr9_-_139658965_139658975	0.568759	GLI2	ENST00000316144.5|LCN15|ENSG00000177984.6|lipocalin 15
hg19_v2_chr19_+_41107249_41107295	0.554564	GLI2	ENST00000396819.3|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr19_-_53757941_53758088	0.551508	GLI2	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr1_-_38471156_38471194	0.545532	GLI2	ENST00000373016.3|FHL3|ENSG00000183386.5|four and a half LIM domains 3
hg19_v2_chr22_+_20193905_20193930	0.54301	GLI2	ENST00000609602.1|LINC00896|ENSG00000236499.2|long intergenic non-protein coding RNA 896
hg19_v2_chr22_+_39378346_39378366	0.538319	GLI2	ENST00000407298.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr11_-_64527425_64527461	0.52611	GLI2	ENST00000377432.3|PYGM|ENSG00000068976.9|phosphorylase, glycogen, muscle
hg19_v2_chr5_+_154238149_154238267	0.525646	GLI2	ENST00000519430.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520671.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521583.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518028.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519404.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519394.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518775.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr22_+_37447771_37447916	0.522112	GLI2	ENST00000402077.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000403888.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000456470.1|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17
hg19_v2_chr19_+_56159362_56159405	0.520011	GLI2	ENST00000593069.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000308964.3|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106
hg19_v2_chr5_-_177659761_177659832	0.519146	GLI2	ENST00000308158.5|PHYKPL|ENSG00000175309.10|5-phosphohydroxy-L-lysine phospho-lyase
hg19_v2_chr14_+_21467414_21467463	0.51836	GLI2	ENST00000554422.1|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2 	ENST00000298681.4|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2
hg19_v2_chr1_+_164528866_164528877	0.512479	GLI2	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr6_+_89790459_89790479	0.509431	GLI2	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr6_-_53530474_53530508	0.500959	GLI2	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chrX_+_51636629_51636759	0.500427	GLI2	ENST00000375722.1|MAGED1|ENSG00000179222.13|melanoma antigen family D, 1 	ENST00000326587.7|MAGED1|ENSG00000179222.13|melanoma antigen family D, 1 	ENST00000375695.2|MAGED1|ENSG00000179222.13|melanoma antigen family D, 1
hg19_v2_chr5_-_178054105_178054119	0.498418	GLI2	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr2_-_224702201_224702256	0.493823	GLI2	ENST00000446015.2|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr5_-_132112921_132112960	0.492705	GLI2	ENST00000378721.4|SEPT8|ENSG00000164402.9|septin 8 	ENST00000378701.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr3_-_179169330_179169384	0.48908	GLI2	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr1_-_241520525_241520536	0.486986	GLI2	ENST00000366565.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr17_-_30185946_30185970	0.485801	GLI2	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr17_+_80332153_80332153	0.485727	GLI2	ENST00000313135.2|UTS2R|ENSG00000181408.2|urotensin 2 receptor
hg19_v2_chr15_-_78526855_78526916	0.473753	GLI2	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr8_+_27183033_27183088	0.471093	GLI2	ENST00000420218.2|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr1_+_171060018_171060060	0.469878	GLI2	ENST00000367755.4|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000392085.2|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000542847.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000538429.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000479749.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3
hg19_v2_chr21_+_37507210_37507361	0.469755	GLI2	ENST00000290354.5|CBR3|ENSG00000159231.5|carbonyl reductase 3
hg19_v2_chr22_+_39378375_39378428	0.46473	GLI2	ENST00000402182.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B 	ENST00000333467.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr19_-_40791211_40791269	0.464679	GLI2	ENST00000579047.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr12_+_50355647_50355661	0.461236	GLI2	ENST00000293599.6|AQP5|ENSG00000161798.6|aquaporin 5
hg19_v2_chr5_+_149340282_149340336	0.457898	GLI2	ENST00000286298.4|SLC26A2|ENSG00000155850.7|solute carrier family 26 (anion exchanger), member 2
hg19_v2_chrX_+_153448107_153448107	0.453573	GLI2	ENST00000369935.5|OPN1MW|ENSG00000147380.6|opsin 1 (cone pigments), medium-wave-sensitive
hg19_v2_chr1_-_241520385_241520457	0.450524	GLI2	ENST00000366564.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr1_-_36185073_36185073	0.450108	GLI2	ENST00000270815.4|C1orf216|ENSG00000142686.7|chromosome 1 open reading frame 216
hg19_v2_chr5_+_150157860_150157883	0.445558	GLI2	ENST00000600109.1|AC010441.1|ENSG00000269636.1|AC010441.1
hg19_v2_chr18_-_60987220_60987386	0.445353	GLI2	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr5_-_88119580_88119605	0.44394	GLI2	ENST00000539796.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr3_-_88108192_88108203	0.442987	GLI2	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr3_+_133118839_133118925	0.441086	GLI2	ENST00000302334.2|BFSP2|ENSG00000170819.4|beaded filament structural protein 2, phakinin
hg19_v2_chr3_+_88108381_88108450	0.440497	GLI2	ENST00000473136.1|RP11-159G9.5|ENSG00000229729.3|Uncharacterized protein
hg19_v2_chr19_+_56159509_56159643	0.440329	GLI2	ENST00000586790.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000591578.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000588740.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106
hg19_v2_chr19_-_10450328_10450499	0.437991	GLI2	ENST00000160262.5|ICAM3|ENSG00000076662.5|intercellular adhesion molecule 3
hg19_v2_chr4_-_5894777_5894799	0.432624	GLI2	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr1_+_47799542_47799624	0.429932	GLI2	ENST00000471289.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 	ENST00000450808.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr9_+_15553000_15553054	0.42687	GLI2	ENST00000297641.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr9_+_139247484_139247509	0.425573	GLI2	ENST00000429455.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chr2_+_131369054_131369054	0.425181	GLI2	ENST00000409602.1|POTEJ|ENSG00000222038.3|POTE ankyrin domain family, member J
hg19_v2_chrX_+_153409678_153409698	0.42448	GLI2	ENST00000369951.4|OPN1LW|ENSG00000102076.5|opsin 1 (cone pigments), long-wave-sensitive
hg19_v2_chr5_+_150157444_150157508	0.424418	GLI2	ENST00000526627.1|SMIM3|ENSG00000256235.1|small integral membrane protein 3
hg19_v2_chr2_-_224702257_224702266	0.424394	GLI2	ENST00000409375.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr11_-_63439013_63439091	0.424054	GLI2	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr19_+_4304585_4304627	0.423537	GLI2	ENST00000221856.6|FSD1|ENSG00000105255.6|fibronectin type III and SPRY domain containing 1
hg19_v2_chr15_-_63449663_63449698	0.423457	GLI2	ENST00000439025.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr10_+_70320413_70320413	0.421945	GLI2	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr11_+_67776012_67776048	0.42167	GLI2	ENST00000539229.1|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1
hg19_v2_chr4_-_39529049_39529067	0.416986	GLI2	ENST00000501493.2|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase 	ENST00000509391.1|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase 	ENST00000507089.1|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase
hg19_v2_chr6_+_24495067_24495096	0.415526	GLI2	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr12_-_90024360_90024531	0.415021	GLI2	ENST00000393164.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr11_+_66045634_66045710	0.414713	GLI2	ENST00000528852.1|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2 	ENST00000311445.6|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2
hg19_v2_chr5_-_132113036_132113061	0.414274	GLI2	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr5_-_176923803_176923832	0.414058	GLI2	ENST00000506161.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr9_-_115818951_115819011	0.413011	GLI2	ENST00000553380.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein 	ENST00000374227.3|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr11_+_124609742_124609817	0.409133	GLI2	ENST00000284292.6|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr14_+_24605389_24605446	0.407196	GLI2	ENST00000382708.3|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000561435.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr20_-_2821271_2821343	0.404777	GLI2	ENST00000448755.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000360652.2|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr4_-_107237374_107237428	0.404538	GLI2	ENST00000361687.4|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000507696.1|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000394708.2|TBCK|ENSG00000145348.12|TBC1 domain containing kinase 	ENST00000509532.1|TBCK|ENSG00000145348.12|TBC1 domain containing kinase
hg19_v2_chr17_-_30185971_30186093	0.403563	GLI2	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr5_-_176923846_176923888	0.402963	GLI2	ENST00000506537.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr20_-_2821756_2821836	0.39768	GLI2	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr5_+_154238042_154238091	0.39501	GLI2	ENST00000519211.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000522458.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519903.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521450.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000403027.2|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr19_+_39904168_39904468	0.392293	GLI2	ENST00000438123.1|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2 	ENST00000409797.2|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2 	ENST00000451354.2|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg19_v2_chr8_+_1922024_1922069	0.390269	GLI2	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr3_+_54156664_54156694	0.389654	GLI2	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chrX_+_55744166_55744222	0.389557	GLI2	ENST00000374941.4|RRAGB|ENSG00000083750.8|Ras-related GTP binding B 	ENST00000414239.1|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr2_+_242811874_242811904	0.386015	GLI2	ENST00000343216.3|CXXC11|ENSG00000188011.5|CXXC finger protein 11
hg19_v2_chr1_+_202431859_202431871	0.385446	GLI2	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr8_+_22428457_22428633	0.381954	GLI2	ENST00000517962.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr4_-_107237340_107237371	0.377836	GLI2	ENST00000394706.3|TBCK|ENSG00000145348.12|TBC1 domain containing kinase
hg19_v2_chr12_+_77158021_77158045	0.376865	GLI2	ENST00000550876.1|ZDHHC17|ENSG00000186908.10|zinc finger, DHHC-type containing 17
hg19_v2_chr22_+_50528459_50528516	0.376693	GLI2	ENST00000395858.3|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 	ENST00000395843.1|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)
hg19_v2_chr19_+_47105309_47105329	0.374309	GLI2	ENST00000599839.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000596362.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr3_-_88108212_88108223	0.373978	GLI2	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr1_+_150522222_150522315	0.371937	GLI2	ENST00000369039.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr19_-_53758094_53758147	0.371709	GLI2	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr11_+_76777979_76778027	0.370348	GLI2	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr3_+_54156570_54156627	0.368605	GLI2	ENST00000415676.2|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr5_-_132113063_132113082	0.368601	GLI2	ENST00000378719.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr19_+_49617581_49617607	0.368437	GLI2	ENST00000391864.3|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr1_-_26232951_26232959	0.367135	GLI2	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr22_+_32149927_32150081	0.364356	GLI2	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chr6_+_89790490_89790506	0.363906	GLI2	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr12_+_3000073_3000092	0.363789	GLI2	ENST00000397132.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr11_-_414948_415017	0.361946	GLI2	ENST00000530494.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528209.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000431843.2|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528058.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr5_-_132112907_132112918	0.359622	GLI2	ENST00000458488.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr9_-_115819039_115819082	0.358831	GLI2	ENST00000555206.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr20_-_2781222_2781302	0.355478	GLI2	ENST00000380605.2|CPXM1|ENSG00000088882.7|carboxypeptidase X (M14 family), member 1
hg19_v2_chr5_-_132113559_132113579	0.354139	GLI2	ENST00000448933.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr16_+_68573640_68573698	0.353065	GLI2	ENST00000398253.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573161.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr10_-_104474128_104474209	0.347282	GLI2	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr7_-_150974494_150974538	0.34692	GLI2	ENST00000392811.2|SMARCD3|ENSG00000082014.12|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
hg19_v2_chr8_-_67525473_67525518	0.346509	GLI2	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr22_-_30867973_30868036	0.345796	GLI2	ENST00000402286.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000401751.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000539629.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000403066.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000215812.4|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr18_-_59274139_59274190	0.345028	GLI2	ENST00000586949.1|RP11-879F14.2|ENSG00000267279.1|RP11-879F14.2
hg19_v2_chr17_+_7483761_7483825	0.344654	GLI2	ENST00000584180.1|CD68|ENSG00000129226.9|CD68 molecule
hg19_v2_chr17_+_58677539_58677610	0.342495	GLI2	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr1_+_6845578_6845591	0.339982	GLI2	ENST00000467404.2|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1 	ENST00000439411.2|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr1_-_153599426_153599524	0.339798	GLI2	ENST00000392622.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr5_+_9546306_9546329	0.339348	GLI2	ENST00000508179.1|SNHG18|ENSG00000250786.1|small nucleolar RNA host gene 18 (non-protein coding)
hg19_v2_chr5_+_154237778_154237822	0.338177	GLI2	ENST00000523698.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000517876.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520472.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr8_-_42065187_42065242	0.337364	GLI2	ENST00000270189.6|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000352041.3|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000220809.4|PLAT|ENSG00000104368.13|plasminogen activator, tissue
hg19_v2_chr12_+_53689309_53689366	0.336478	GLI2	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr5_+_154238096_154238119	0.334357	GLI2	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr2_-_224702740_224702761	0.334123	GLI2	ENST00000444408.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr15_+_31658349_31658358	0.332639	GLI2	ENST00000558844.1|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chrX_+_55744228_55744318	0.332367	GLI2	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr17_+_55333876_55333939	0.331828	GLI2	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr1_+_109102652_109102728	0.328109	GLI2	ENST00000370035.3|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B 	ENST00000405454.1|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B
hg19_v2_chr1_-_153522562_153522612	0.324145	GLI2	ENST00000368714.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr5_+_176237478_176237496	0.322361	GLI2	ENST00000329542.4|UNC5A|ENSG00000113763.6|unc-5 homolog A (C. elegans)
hg19_v2_chr5_-_43412418_43412499	0.32175	GLI2	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr7_+_106809406_106809460	0.318535	GLI2	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr5_-_64920115_64920174	0.317305	GLI2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr17_-_79995553_79995608	0.316981	GLI2	ENST00000581584.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000577712.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000582900.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000579155.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000306869.2|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase
hg19_v2_chr1_-_26233423_26233482	0.31625	GLI2	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr17_+_42923686_42923721	0.315494	GLI2	ENST00000591513.1|HIGD1B|ENSG00000131097.2|HIG1 hypoxia inducible domain family, member 1B
hg19_v2_chr1_+_104198377_104198377	0.314275	GLI2	ENST00000370083.4|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr12_+_3000037_3000067	0.312995	GLI2	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr14_+_100531615_100531705	0.310689	GLI2	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr2_+_95537170_95537188	0.310152	GLI2	ENST00000295201.4|TEKT4|ENSG00000163060.6|tektin 4
hg19_v2_chr3_+_156008809_156008839	0.308719	GLI2	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr19_+_56915668_56915732	0.306916	GLI2	ENST00000333201.9|ZNF583|ENSG00000198440.5|zinc finger protein 583 	ENST00000391778.3|ZNF583|ENSG00000198440.5|zinc finger protein 583
hg19_v2_chr2_+_10560147_10560201	0.306581	GLI2	ENST00000422133.1|HPCAL1|ENSG00000115756.8|hippocalcin-like 1
hg19_v2_chr12_+_55248289_55248321	0.303569	GLI2	ENST00000308796.6|MUCL1|ENSG00000172551.6|mucin-like 1
hg19_v2_chr11_-_34937858_34937944	0.302504	GLI2	ENST00000278359.5|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr17_-_30186328_30186356	0.302475	GLI2	ENST00000302362.6|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr1_-_54411255_54411290	0.301995	GLI2	ENST00000371377.3|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr17_+_26698677_26698732	0.301369	GLI2	ENST00000457710.3|SARM1|ENSG00000004139.9|sterile alpha and TIR motif containing 1
hg19_v2_chr15_+_27112948_27113033	0.300057	GLI2	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr22_-_50708781_50708852	0.299597	GLI2	ENST00000449719.2|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11 	ENST00000330651.6|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11
hg19_v2_chr1_-_153599732_153599803	0.295715	GLI2	ENST00000392623.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr3_+_11196206_11196220	0.293535	GLI2	ENST00000431010.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr11_-_66103932_66104000	0.293035	GLI2	ENST00000311320.4|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr14_-_39572279_39572340	0.291484	GLI2	ENST00000536508.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr12_-_110318263_110318320	0.291172	GLI2	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr3_-_138312971_138313132	0.291052	GLI2	ENST00000485115.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000484888.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000468900.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000542237.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000481834.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa
hg19_v2_chr9_+_139743176_139743256	0.290367	GLI2	ENST00000371661.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1 	ENST00000545326.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1
hg19_v2_chr10_+_180405_180429	0.290245	GLI2	ENST00000439456.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11 	ENST00000397962.3|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11 	ENST00000309776.4|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11 	ENST00000381602.4|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr21_+_38445539_38445596	0.287334	GLI2	ENST00000418766.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000450533.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000438055.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000355666.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000540756.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000399010.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3
hg19_v2_chr8_-_29120580_29120596	0.286364	GLI2	ENST00000524189.1|KIF13B|ENSG00000197892.8|kinesin family member 13B
hg19_v2_chr12_-_13248705_13248710	0.286108	GLI2	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr7_+_142985308_142985453	0.284233	GLI2	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr22_-_30783075_30783141	0.283987	GLI2	ENST00000215798.6|RNF215|ENSG00000099999.10|ring finger protein 215
hg19_v2_chr5_-_156569754_156569786	0.282615	GLI2	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr20_-_58508702_58508728	0.280529	GLI2	ENST00000357552.3|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2 	ENST00000425931.1|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2
hg19_v2_chr15_+_59063478_59063561	0.280241	GLI2	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr16_+_33204156_33204156	0.279306	GLI2	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr5_-_132299290_132299310	0.277871	GLI2	ENST00000378595.3|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_-_9132311_9132325	0.274397	GLI2	ENST00000474145.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr12_+_51633061_51633095	0.27395	GLI2	ENST00000551313.1|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr11_+_117103441_117103452	0.273381	GLI2	ENST00000531287.1|RNF214|ENSG00000167257.6|ring finger protein 214 	ENST00000531452.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr1_-_21606013_21606059	0.27325	GLI2	ENST00000357071.4|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr16_-_4897266_4897343	0.270292	GLI2	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v2_chr12_+_123464607_123464873	0.269644	GLI2	ENST00000543566.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000315580.5|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000542099.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000392435.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000413381.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000426960.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000453766.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr10_-_35104185_35104267	0.269249	GLI2	ENST00000374789.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374788.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000346874.4|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374794.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000350537.4|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374790.3|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374776.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000374773.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000545693.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000545260.1|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator 	ENST00000340077.5|PARD3|ENSG00000148498.11|par-3 family cell polarity regulator
hg19_v2_chr12_-_56122426_56122458	0.269078	GLI2	ENST00000551173.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr19_-_10464570_10464754	0.267357	GLI2	ENST00000529739.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr11_-_12030629_12030644	0.263997	GLI2	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr17_+_55334364_55334412	0.263856	GLI2	ENST00000322684.3|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2 	ENST00000579590.1|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr19_+_48828582_48828637	0.263421	GLI2	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr1_-_9131776_9131791	0.263118	GLI2	ENST00000484798.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr19_+_7069690_7069726	0.262448	GLI2	ENST00000439035.2|ZNF557|ENSG00000130544.7|zinc finger protein 557
hg19_v2_chr19_+_58125580_58125639	0.259447	GLI2	ENST00000600344.1|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000396161.5|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000600883.1|ZNF134|ENSG00000213762.6|zinc finger protein 134
hg19_v2_chr3_-_72496035_72496069	0.259252	GLI2	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr15_+_63569731_63569783	0.25867	GLI2	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr1_-_150602035_150602095	0.25764	GLI2	ENST00000503241.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369016.4|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000339643.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000271690.8|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000356527.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000362052.7|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000503345.1|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369014.5|ENSA|ENSG00000143420.13|endosulfine alpha 	ENST00000369009.3|ENSA|ENSG00000143420.13|endosulfine alpha
hg19_v2_chr11_+_76778033_76778047	0.257172	GLI2	ENST00000456580.2|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr1_-_110283138_110283138	0.256591	GLI2	ENST00000256594.3|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr12_-_56122220_56122266	0.255376	GLI2	ENST00000552692.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr3_+_105085734_105085760	0.254818	GLI2	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr5_+_118407053_118407239	0.254512	GLI2	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr1_+_1950763_1950815	0.253619	GLI2	ENST00000378585.4|GABRD|ENSG00000187730.6|gamma-aminobutyric acid (GABA) A receptor, delta
hg19_v2_chr10_+_94451574_94451612	0.253112	GLI2	ENST00000492654.2|HHEX|ENSG00000152804.6|hematopoietically expressed homeobox
hg19_v2_chr2_-_232395169_232395206	0.252778	GLI2	ENST00000305141.4|NMUR1|ENSG00000171596.6|neuromedin U receptor 1
hg19_v2_chr10_+_124030819_124030827	0.252719	GLI2	ENST00000260723.4|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16 	ENST00000368994.2|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16
hg19_v2_chr3_-_15140629_15140670	0.252345	GLI2	ENST00000507357.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000449050.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000253699.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000435849.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000476527.2|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20
hg19_v2_chr16_+_68573116_68573228	0.252322	GLI2	ENST00000570495.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000563169.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000564323.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000562156.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573685.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr11_-_34938039_34938050	0.251731	GLI2	ENST00000395787.3|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr2_+_220379052_220379131	0.251619	GLI2	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chrX_+_152086373_152086414	0.251357	GLI2	ENST00000318529.8|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain)
hg19_v2_chr19_+_48824711_48824766	0.251277	GLI2	ENST00000599704.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr6_-_8064567_8064652	0.251041	GLI2	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr1_-_19811132_19811158	0.250909	GLI2	ENST00000433834.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr20_+_18568537_18568585	0.250158	GLI2	ENST00000377452.3|DTD1|ENSG00000125821.7|D-tyrosyl-tRNA deacylase 1
hg19_v2_chr16_+_53088885_53088961	0.249361	GLI2	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr1_-_165414414_165414433	0.248706	GLI2	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chr6_+_116892530_116892592	0.246906	GLI2	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr7_-_97881429_97881563	0.245709	GLI2	ENST00000420697.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000379795.3|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000415086.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000542604.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000447648.2|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1
hg19_v2_chr19_-_42806919_42806958	0.245131	GLI2	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr19_-_7939319_7939358	0.245028	GLI2	ENST00000539422.1|CTD-3193O13.9|ENSG00000183248.7|Protein FLJ22184
hg19_v2_chr19_-_49314169_49314194	0.244574	GLI2	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr22_-_21905750_21905750	0.243035	GLI2	ENST00000433039.1|RIMBP3C|ENSG00000183246.6|RIMS binding protein 3C
hg19_v2_chr12_-_13248732_13248744	0.239419	GLI2	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr19_-_59066327_59066389	0.239093	GLI2	ENST00000596708.1|CHMP2A|ENSG00000130724.4|charged multivesicular body protein 2A 	ENST00000601220.1|CHMP2A|ENSG00000130724.4|charged multivesicular body protein 2A 	ENST00000597848.1|CHMP2A|ENSG00000130724.4|charged multivesicular body protein 2A
hg19_v2_chr1_-_47407111_47407128	0.239052	GLI2	ENST00000371904.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr16_+_67062996_67063019	0.238076	GLI2	ENST00000561924.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr5_+_126112794_126112928	0.237862	GLI2	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr17_+_44076616_44076616	0.237836	GLI2	ENST00000537309.1|STH|ENSG00000256762.1|saitohin
hg19_v2_chr11_+_18230727_18230755	0.23781	GLI2	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr1_+_6845497_6845561	0.237785	GLI2	ENST00000473578.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1 	ENST00000557126.1|CAMTA1|ENSG00000171735.14|calmodulin binding transcription activator 1
hg19_v2_chr3_+_129158926_129159006	0.237294	GLI2	ENST00000347300.2|IFT122|ENSG00000163913.7|intraflagellar transport 122 homolog (Chlamydomonas) 	ENST00000296266.3|IFT122|ENSG00000163913.7|intraflagellar transport 122 homolog (Chlamydomonas)
hg19_v2_chr17_-_33288522_33288533	0.236593	GLI2	ENST00000314144.5|CCT6B|ENSG00000132141.9|chaperonin containing TCP1, subunit 6B (zeta 2)
hg19_v2_chr19_+_45418067_45418126	0.23636	GLI2	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr8_+_38965048_38965292	0.236252	GLI2	ENST00000399831.3|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000437682.2|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000519315.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000379907.4|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000522506.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32
hg19_v2_chr19_+_49617609_49617681	0.234836	GLI2	ENST00000221459.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans) 	ENST00000486217.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr12_+_6881678_6881707	0.234292	GLI2	ENST00000441671.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3 	ENST00000203629.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3
hg19_v2_chr12_-_13248562_13248596	0.232165	GLI2	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr13_+_115000521_115000536	0.232057	GLI2	ENST00000252457.5|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375308.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr17_+_26989109_26989248	0.231082	GLI2	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr13_+_115000556_115000573	0.231009	GLI2	ENST00000252458.6|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr20_-_45318230_45318418	0.2309	GLI2	ENST00000372114.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr10_+_115438920_115438963	0.230788	GLI2	ENST00000429617.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000369331.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr13_+_115000339_115000380	0.228534	GLI2	ENST00000360383.3|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375312.3|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr19_+_37407212_37407280	0.228471	GLI2	ENST00000427117.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000587130.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000333987.7|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000415168.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000444991.1|ZNF568|ENSG00000198453.8|zinc finger protein 568
hg19_v2_chr5_+_41925325_41925416	0.228248	GLI2	ENST00000296812.2|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000281623.3|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000509134.1|FBXO4|ENSG00000151876.8|F-box protein 4
hg19_v2_chr8_-_134584152_134584213	0.226335	GLI2	ENST00000521180.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000517668.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000319914.5|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr12_-_56120838_56120848	0.225804	GLI2	ENST00000548160.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr13_+_115047097_115047120	0.223966	GLI2	ENST00000351487.5|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr6_-_28367481_28367508	0.223787	GLI2	ENST00000396827.3|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr5_-_176889381_176889432	0.223043	GLI2	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr15_+_42867857_42867884	0.222793	GLI2	ENST00000290607.7|STARD9|ENSG00000159433.7|StAR-related lipid transfer (START) domain containing 9
hg19_v2_chr16_-_18430593_18430593	0.221935	GLI2	ENST00000525596.1|NPIPA8|ENSG00000214940.4|nuclear pore complex interacting protein family, member A8
hg19_v2_chr20_+_3776371_3776506	0.220833	GLI2	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr12_-_56122761_56123004	0.220668	GLI2	ENST00000552164.1|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000420846.3|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000257857.4|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr19_-_12941215_12941230	0.220062	GLI2	ENST00000458671.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr17_+_6544078_6544125	0.219761	GLI2	ENST00000250101.5|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr19_-_42806723_42806795	0.219646	GLI2	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr20_+_44746885_44746914	0.217696	GLI2	ENST00000372285.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr19_-_49314269_49314293	0.216297	GLI2	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr12_+_51632638_51632665	0.215944	GLI2	ENST00000549732.2|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr19_+_41860047_41860083	0.215938	GLI2	ENST00000604123.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr3_-_10052763_10052816	0.215402	GLI2	ENST00000383808.2|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000426698.1|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000470827.2|EMC3|ENSG00000125037.8|ER membrane protein complex subunit 3
hg19_v2_chr17_-_42298201_42298284	0.21512	GLI2	ENST00000527034.1|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr20_+_43514320_43514425	0.21417	GLI2	ENST00000372839.3|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 	ENST00000428262.1|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 	ENST00000445830.1|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr19_+_1248547_1248562	0.213784	GLI2	ENST00000586757.1|MIDN|ENSG00000167470.8|midnolin 	ENST00000300952.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr14_-_39572345_39572453	0.213217	GLI2	ENST00000548032.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000556092.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000557280.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000545328.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000553970.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr16_+_89940012_89940076	0.212319	GLI2	ENST00000561958.1|TCF25|ENSG00000141002.14|transcription factor 25 (basic helix-loop-helix) 	ENST00000263346.8|TCF25|ENSG00000141002.14|transcription factor 25 (basic helix-loop-helix) 	ENST00000565196.1|TCF25|ENSG00000141002.14|transcription factor 25 (basic helix-loop-helix) 	ENST00000568412.1|TCF25|ENSG00000141002.14|transcription factor 25 (basic helix-loop-helix)
hg19_v2_chr11_+_34460447_34460561	0.211062	GLI2	ENST00000241052.4|CAT|ENSG00000121691.4|catalase
hg19_v2_chr18_+_11751466_11751475	0.211009	GLI2	ENST00000535121.1|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr22_+_39410088_39410088	0.208888	GLI2	ENST00000361441.4|APOBEC3C|ENSG00000244509.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v2_chr4_+_166794862_166794896	0.208847	GLI2	ENST00000513213.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr15_-_39486510_39486531	0.208154	GLI2	ENST00000560743.1|RP11-265N7.1|ENSG00000259450.1|RP11-265N7.1
hg19_v2_chr10_-_45496336_45496379	0.207785	GLI2	ENST00000298298.1|C10orf25|ENSG00000165511.4|chromosome 10 open reading frame 25
hg19_v2_chr16_+_67063036_67063088	0.206903	GLI2	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr14_-_106068065_106068065	0.20689	GLI2	ENST00000390541.2|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr12_-_59313270_59313327	0.206752	GLI2	ENST00000379141.4|LRIG3|ENSG00000139263.7|leucine-rich repeats and immunoglobulin-like domains 3
hg19_v2_chr19_-_59066452_59066496	0.206277	GLI2	ENST00000312547.2|CHMP2A|ENSG00000130724.4|charged multivesicular body protein 2A
hg19_v2_chr16_+_4896659_4896674	0.205812	GLI2	ENST00000592120.1|UBN1|ENSG00000118900.10|ubinuclein 1
hg19_v2_chr1_-_182369751_182369777	0.205385	GLI2	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr17_-_3819751_3819794	0.205058	GLI2	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chrX_-_107334750_107334780	0.204592	GLI2	ENST00000340200.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372296.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372295.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000361815.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr14_-_71107921_71108085	0.204009	GLI2	ENST00000553982.1|CTD-2540L5.5|ENSG00000259115.1|CTD-2540L5.5	ENST00000500016.1|CTD-2540L5.6|ENSG00000245466.1|CTD-2540L5.6
hg19_v2_chr16_+_16425734_16425734	0.203318	GLI2	ENST00000381497.2|AC138969.4|ENSG00000183889.8|Protein PKD1P1
hg19_v2_chr2_-_24308051_24308085	0.203133	GLI2	ENST00000238721.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3 	ENST00000335934.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3
hg19_v2_chr19_-_4454081_4454090	0.202774	GLI2	ENST00000591919.1|UBXN6|ENSG00000167671.7|UBX domain protein 6
hg19_v2_chr2_-_73298802_73298965	0.201877	GLI2	ENST00000411783.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000410065.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000442582.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000272433.2|SFXN5|ENSG00000144040.8|sideroflexin 5
hg19_v2_chr5_-_137090028_137090075	0.201146	GLI2	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr16_+_67063142_67063153	0.199657	GLI2	ENST00000412916.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr5_-_131347583_131347870	0.199412	GLI2	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr16_+_89686991_89687015	0.199302	GLI2	ENST00000393092.3|DPEP1|ENSG00000015413.5|dipeptidase 1 (renal)
hg19_v2_chr19_+_45445524_45445537	0.19899	GLI2	ENST00000591600.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV
hg19_v2_chr15_+_63569785_63569824	0.198873	GLI2	ENST00000380343.4|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit 	ENST00000560353.1|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr10_-_127511790_127511837	0.197619	GLI2	ENST00000368797.4|UROS|ENSG00000188690.8|uroporphyrinogen III synthase 	ENST00000420761.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
hg19_v2_chr21_+_48055527_48055608	0.197431	GLI2	ENST00000397638.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000458387.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000451211.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000291705.6|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397637.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000334494.4|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397628.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000440086.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2
hg19_v2_chr20_+_2821340_2821365	0.195632	GLI2	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr2_-_20101385_20101417	0.195212	GLI2	ENST00000431392.1|TTC32|ENSG00000183891.5|tetratricopeptide repeat domain 32
hg19_v2_chr5_-_132299313_132299334	0.194016	GLI2	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr15_-_98417780_98417780	0.192529	GLI2	ENST00000503874.3|LINC00923|ENSG00000251209.3|long intergenic non-protein coding RNA 923
hg19_v2_chr6_-_26027480_26027522	0.192394	GLI2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr19_+_18530146_18530172	0.192366	GLI2	ENST00000348495.6|SSBP4|ENSG00000130511.11|single stranded DNA binding protein 4 	ENST00000270061.7|SSBP4|ENSG00000130511.11|single stranded DNA binding protein 4
hg19_v2_chr3_-_10334585_10334601	0.191916	GLI2	ENST00000430179.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000449238.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000437422.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000287656.7|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000457360.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000439975.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000446937.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr5_-_131826457_131826514	0.191632	GLI2	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr19_+_37464063_37464127	0.191203	GLI2	ENST00000586353.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000433993.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000592567.1|ZNF568|ENSG00000198453.8|zinc finger protein 568
hg19_v2_chr19_+_45445491_45445513	0.190814	GLI2	ENST00000592954.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000419266.2|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000589057.1|APOC4-APOC2|ENSG00000224916.4|APOC4-APOC2 readthrough (NMD candidate)
hg19_v2_chr12_-_122712038_122712081	0.189749	GLI2	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr17_-_8198636_8198724	0.188513	GLI2	ENST00000577745.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35 	ENST00000579192.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35 	ENST00000396278.1|SLC25A35|ENSG00000125434.6|solute carrier family 25, member 35
hg19_v2_chr7_-_50518022_50518088	0.188503	GLI2	ENST00000356889.4|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000420829.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000448788.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000395556.2|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000422854.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000435566.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000433017.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1
hg19_v2_chr19_+_45417504_45417589	0.187084	GLI2	ENST00000588750.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000588802.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr19_-_11347173_11347241	0.186519	GLI2	ENST00000587656.1|DOCK6|ENSG00000130158.9|dedicator of cytokinesis 6
hg19_v2_chr11_-_65686496_65686555	0.186462	GLI2	ENST00000449692.3|C11orf68|ENSG00000175573.6|chromosome 11 open reading frame 68
hg19_v2_chr20_+_1246908_1246999	0.186372	GLI2	ENST00000381873.3|SNPH|ENSG00000101298.9|syntaphilin 	ENST00000381867.1|SNPH|ENSG00000101298.9|syntaphilin
hg19_v2_chr17_+_73996987_73996987	0.186352	GLI2	ENST00000588812.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3 	ENST00000448471.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3
hg19_v2_chrX_-_107334790_107334848	0.185362	GLI2	ENST00000217958.3|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr7_-_23053693_23053715	0.18531	GLI2	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr19_+_10131437_10131437	0.185011	GLI2	ENST00000587782.1|RDH8|ENSG00000080511.2|retinol dehydrogenase 8 (all-trans)
hg19_v2_chr14_+_96342729_96342790	0.184864	GLI2	ENST00000504119.1|LINC00617|ENSG00000250366.2|long intergenic non-protein coding RNA 617
hg19_v2_chr14_+_102027688_102027833	0.184586	GLI2	ENST00000510508.4|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III 	ENST00000359323.3|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III
hg19_v2_chr16_-_18801643_18801705	0.184324	GLI2	ENST00000322989.4|RPS15A|ENSG00000134419.11|ribosomal protein S15a 	ENST00000563390.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr1_+_244998602_244998646	0.183222	GLI2	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr8_+_96146168_96146304	0.183188	GLI2	ENST00000519516.1|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr22_-_30783356_30783415	0.183018	GLI2	ENST00000382363.3|RNF215|ENSG00000099999.10|ring finger protein 215
hg19_v2_chr14_-_74417096_74417117	0.182897	GLI2	ENST00000286544.3|FAM161B|ENSG00000156050.4|family with sequence similarity 161, member B
hg19_v2_chr17_-_37557846_37557920	0.182134	GLI2	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr22_-_24093267_24093327	0.181562	GLI2	ENST00000341976.3|ZNF70|ENSG00000187792.3|zinc finger protein 70
hg19_v2_chr12_-_56120865_56120912	0.181529	GLI2	ENST00000548898.1|CD63|ENSG00000135404.7|CD63 molecule 	ENST00000552067.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chr8_+_11627205_11627288	0.18098	GLI2	ENST00000455213.2|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000403422.3|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000528323.1|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000284503.6|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli)
hg19_v2_chr9_+_15553055_15553101	0.180965	GLI2	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr22_-_24384240_24384255	0.180912	GLI2	ENST00000439996.2|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1 	ENST00000417870.1|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1
hg19_v2_chr5_-_127418755_127418864	0.180406	GLI2	ENST00000501702.2|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000501173.2|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000514573.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000499346.2|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000606251.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3
hg19_v2_chr12_-_9885702_9885717	0.179304	GLI2	ENST00000542530.1|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr16_+_89989687_89989774	0.17916	GLI2	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr17_-_80059726_80059809	0.179072	GLI2	ENST00000583053.1|CCDC57|ENSG00000176155.14|coiled-coil domain containing 57
hg19_v2_chr20_-_62475273_62475273	0.178725	GLI2	ENST00000596861.1|AL158091.1|ENSG00000269223.1|Protein LOC100509861
hg19_v2_chr11_-_73309228_73309257	0.178704	GLI2	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr22_-_19419205_19419280	0.178053	GLI2	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr19_+_45417921_45417970	0.177742	GLI2	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr22_-_24384260_24384284	0.177411	GLI2	ENST00000248935.5|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1
hg19_v2_chrX_-_52683950_52683950	0.177401	GLI2	ENST00000298181.5|SSX7|ENSG00000187754.8|synovial sarcoma, X breakpoint 7
hg19_v2_chr12_-_118541743_118541777	0.177373	GLI2	ENST00000359236.5|VSIG10|ENSG00000176834.9|V-set and immunoglobulin domain containing 10
hg19_v2_chr7_+_6617039_6617136	0.177267	GLI2	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chr2_-_70475701_70475717	0.177132	GLI2	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr12_-_82153087_82153138	0.177095	GLI2	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr16_-_67190152_67190152	0.176543	GLI2	ENST00000486556.1|TRADD|ENSG00000102871.11|TNFRSF1A-associated via death domain
hg19_v2_chr9_-_95298314_95298340	0.17571	GLI2	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr4_+_6784401_6784510	0.175485	GLI2	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr5_+_161275320_161275450	0.175006	GLI2	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr1_-_11741155_11741271	0.174451	GLI2	ENST00000445656.1|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000376669.5|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000456915.1|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000376692.4|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast)
hg19_v2_chr5_+_76506706_76506787	0.172918	GLI2	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr20_+_3776936_3776964	0.172197	GLI2	ENST00000439880.2|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr6_-_74233480_74233520	0.171138	GLI2	ENST00000455918.1|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr11_+_62495541_62495617	0.170817	GLI2	ENST00000530625.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C 	ENST00000513247.2|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr20_+_44746939_44746962	0.170741	GLI2	ENST00000372276.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr19_-_37406923_37406949	0.170559	GLI2	ENST00000520965.1|ZNF829|ENSG00000185869.9|zinc finger protein 829
hg19_v2_chr14_+_74417192_74417227	0.168329	GLI2	ENST00000554320.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr19_+_55795493_55795534	0.168184	GLI2	ENST00000309383.1|BRSK1|ENSG00000160469.12|BR serine/threonine kinase 1
hg19_v2_chr11_+_64358110_64358116	0.168159	GLI2	ENST00000377567.2|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr6_+_26240561_26240628	0.167147	GLI2	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr22_-_31688381_31688418	0.167071	GLI2	ENST00000487265.2|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr22_-_43040515_43040645	0.166993	GLI2	ENST00000361740.4|CYB5R3|ENSG00000100243.16|cytochrome b5 reductase 3
hg19_v2_chr17_-_6554877_6554954	0.166594	GLI2	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr8_-_145060593_145060634	0.165784	GLI2	ENST00000313059.5|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000524918.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000313028.7|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000525773.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10
hg19_v2_chr2_-_241759622_241759725	0.165677	GLI2	ENST00000320389.7|KIF1A|ENSG00000130294.10|kinesin family member 1A 	ENST00000498729.2|KIF1A|ENSG00000130294.10|kinesin family member 1A
hg19_v2_chr11_+_44087729_44087827	0.165245	GLI2	ENST00000524990.1|ACCS|ENSG00000110455.9|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) 	ENST00000263776.8|ACCS|ENSG00000110455.9|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
hg19_v2_chr6_+_35227449_35227551	0.164512	GLI2	ENST00000373953.3|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000440666.2|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000339411.5|ZNF76|ENSG00000065029.10|zinc finger protein 76
hg19_v2_chr8_+_11627148_11627197	0.164344	GLI2	ENST00000436750.3|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli)
hg19_v2_chr22_-_50970506_50970561	0.164335	GLI2	ENST00000428989.2|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B 	ENST00000403326.1|ODF3B|ENSG00000177989.9|outer dense fiber of sperm tails 3B
hg19_v2_chr19_+_45417812_45417869	0.163419	GLI2	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr14_-_24615805_24615834	0.163393	GLI2	ENST00000560410.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr19_-_10679697_10679735	0.162803	GLI2	ENST00000335766.2|CDKN2D|ENSG00000129355.6|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
hg19_v2_chr14_+_78870030_78870098	0.162779	GLI2	ENST00000553631.1|NRXN3|ENSG00000021645.13|neurexin 3 	ENST00000554719.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr15_-_34875771_34875894	0.162681	GLI2	ENST00000267731.7|GOLGA8B|ENSG00000215252.7|golgin A8 family, member B
hg19_v2_chrX_-_141293047_141293082	0.162166	GLI2	ENST00000247452.3|MAGEC2|ENSG00000046774.9|melanoma antigen family C, 2
hg19_v2_chr17_-_9479128_9479181	0.161749	GLI2	ENST00000574431.1|STX8|ENSG00000170310.10|syntaxin 8
hg19_v2_chr14_+_24605361_24605381	0.16173	GLI2	ENST00000206451.6|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000559123.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr17_-_76274572_76274581	0.160046	GLI2	ENST00000374945.1|RP11-219G17.4|ENSG00000204277.1|RP11-219G17.4
hg19_v2_chr5_-_133512683_133512729	0.158512	GLI2	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr2_+_26467825_26467847	0.158218	GLI2	ENST00000545822.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000425035.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr16_+_25228242_25228273	0.15821	GLI2	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr10_+_180643_180764	0.157266	GLI2	ENST00000509513.2|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11 	ENST00000397959.3|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr12_+_69202975_69203013	0.156807	GLI2	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr2_-_70475730_70475798	0.155784	GLI2	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr14_-_75530693_75530761	0.155407	GLI2	ENST00000555135.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000357971.3|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000553302.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000555694.1|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type 	ENST00000238618.3|ACYP1|ENSG00000119640.4|acylphosphatase 1, erythrocyte (common) type
hg19_v2_chr16_-_75300679_75300808	0.155002	GLI2	ENST00000420641.3|BCAR1|ENSG00000050820.12|breast cancer anti-estrogen resistance 1
hg19_v2_chr7_-_6098770_6098861	0.154233	GLI2	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr14_+_24584508_24584583	0.153681	GLI2	ENST00000559354.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560459.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559593.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396941.4|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396936.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chrX_-_30326445_30326605	0.153625	GLI2	ENST00000378963.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr15_-_27018884_27018935	0.153449	GLI2	ENST00000299267.4|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr19_+_23299777_23299844	0.152733	GLI2	ENST00000597761.2|ZNF730|ENSG00000183850.9|zinc finger protein 730
hg19_v2_chr19_-_43709817_43709926	0.151988	GLI2	ENST00000433626.2|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4 	ENST00000405312.3|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr7_-_95064264_95064510	0.151639	GLI2	ENST00000536183.1|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000433091.2|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000222572.3|PON2|ENSG00000105854.8|paraoxonase 2
hg19_v2_chr12_-_89920030_89920039	0.151387	GLI2	ENST00000413530.1|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) 	ENST00000547474.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr19_-_41196534_41196568	0.15111	GLI2	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr2_+_26467762_26467817	0.149699	GLI2	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr14_+_24583836_24584053	0.149246	GLI2	ENST00000559115.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000558215.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000557810.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000561375.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000446197.3|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559796.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560713.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560901.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559382.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chr14_-_24615523_24615569	0.148228	GLI2	ENST00000559056.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr21_+_15588499_15588515	0.147934	GLI2	ENST00000400577.3|RBM11|ENSG00000185272.9|RNA binding motif protein 11
hg19_v2_chr12_-_53715328_53715415	0.147315	GLI2	ENST00000547757.1|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000394384.3|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000209873.4|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia
hg19_v2_chr22_+_39760130_39760175	0.146614	GLI2	ENST00000381535.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr13_+_115000384_115000458	0.14621	GLI2	ENST00000356221.3|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375310.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr19_+_16338416_16338504	0.145908	GLI2	ENST00000586543.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr16_+_1730338_1730369	0.145634	GLI2	ENST00000566691.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382710.4|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr6_+_26204825_26204858	0.145422	GLI2	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr12_+_104982622_104982628	0.145419	GLI2	ENST00000549016.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr1_+_201159914_201159958	0.145416	GLI2	ENST00000335211.4|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000451870.2|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000295591.8|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1
hg19_v2_chr1_+_156756667_156756721	0.145122	GLI2	ENST00000526188.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated) 	ENST00000454659.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated)
hg19_v2_chr11_-_68519026_68519037	0.144923	GLI2	ENST00000255087.5|MTL5|ENSG00000132749.6|metallothionein-like 5, testis-specific (tesmin)
hg19_v2_chr21_-_28338732_28338832	0.144596	GLI2	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr5_+_169931009_169931065	0.144587	GLI2	ENST00000328939.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1 	ENST00000390656.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr9_+_139871948_139871968	0.144587	GLI2	ENST00000224167.2|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000457950.1|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371625.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371623.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain)
hg19_v2_chr3_-_49449350_49449464	0.144365	GLI2	ENST00000454011.2|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000445425.1|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000422781.1|RHOA|ENSG00000067560.6|ras homolog family member A
hg19_v2_chr4_+_108911036_108911065	0.144082	GLI2	ENST00000505878.1|HADH|ENSG00000138796.11|hydroxyacyl-CoA dehydrogenase
hg19_v2_chr1_+_160121356_160121363	0.143999	GLI2	ENST00000368081.4|ATP1A4|ENSG00000132681.12|ATPase, Na+/K+ transporting, alpha 4 polypeptide
hg19_v2_chr13_+_115047053_115047095	0.143962	GLI2	ENST00000375299.3|UPF3A|ENSG00000169062.10|UPF3 regulator of nonsense transcripts homolog A (yeast)
hg19_v2_chr1_+_244998918_244998975	0.143951	GLI2	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr3_-_3221358_3221394	0.143305	GLI2	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr17_-_40897043_40897087	0.142924	GLI2	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr1_+_152943122_152943142	0.141966	GLI2	ENST00000328051.2|SPRR4|ENSG00000184148.3|small proline-rich protein 4
hg19_v2_chr9_+_95858485_95858567	0.141208	GLI2	ENST00000375464.2|C9orf89|ENSG00000165233.13|chromosome 9 open reading frame 89
hg19_v2_chr2_-_183387430_183387465	0.141107	GLI2	ENST00000410103.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr9_+_131218336_131218366	0.14094	GLI2	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr3_-_38071122_38071253	0.140418	GLI2	ENST00000334661.4|PLCD1|ENSG00000187091.9|phospholipase C, delta 1
hg19_v2_chr12_+_123465218_123465295	0.1402	GLI2	ENST00000412505.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000439686.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr14_+_29236269_29236287	0.140192	GLI2	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr17_-_79827808_79827882	0.138787	GLI2	ENST00000580685.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr20_-_55100981_55100981	0.13841	GLI2	ENST00000243913.4|GCNT7|ENSG00000124091.5|glucosaminyl (N-acetyl) transferase family member 7
hg19_v2_chr3_+_140396881_140396887	0.138076	GLI2	ENST00000286349.3|TRIM42|ENSG00000155890.3|tripartite motif containing 42
hg19_v2_chr6_+_42883727_42883740	0.137458	GLI2	ENST00000304672.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha 	ENST00000441198.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha 	ENST00000446507.1|PTCRA|ENSG00000171611.5|pre T-cell antigen receptor alpha
hg19_v2_chr14_+_79745682_79745704	0.137266	GLI2	ENST00000557594.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr11_+_64358686_64358700	0.137255	GLI2	ENST00000473690.1|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr1_+_151739131_151739177	0.136271	GLI2	ENST00000400999.1|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chrX_-_52546033_52546033	0.136059	GLI2	ENST00000375567.3|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr16_-_53537105_53537163	0.135385	GLI2	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr19_+_17638041_17638055	0.133952	GLI2	ENST00000601861.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr1_+_33546714_33546769	0.133743	GLI2	ENST00000294517.6|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000358680.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000373443.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000398167.1|ADC|ENSG00000142920.12|arginine decarboxylase
hg19_v2_chr5_+_161495038_161495056	0.13337	GLI2	ENST00000393933.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr18_+_72201829_72201845	0.132702	GLI2	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr16_+_810728_810767	0.132384	GLI2	ENST00000563941.1|MSLN|ENSG00000102854.10|mesothelin 	ENST00000545450.2|MSLN|ENSG00000102854.10|mesothelin 	ENST00000566549.1|MSLN|ENSG00000102854.10|mesothelin
hg19_v2_chr11_+_62495997_62496011	0.132299	GLI2	ENST00000316461.4|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chrX_+_153146127_153146127	0.131544	GLI2	ENST00000452593.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10  	ENST00000357566.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10
hg19_v2_chr1_+_47799446_47799493	0.130766	GLI2	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr20_+_48599506_48599536	0.13044	GLI2	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr1_+_27114418_27114518	0.129668	GLI2	ENST00000078527.4|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr20_-_18447667_18447829	0.129644	GLI2	ENST00000262547.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000329494.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000357236.4|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1
hg19_v2_chr3_+_16926441_16926463	0.129573	GLI2	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr16_+_1290725_1290737	0.129554	GLI2	ENST00000461509.2|TPSAB1|ENSG00000172236.12|tryptase alpha/beta 1
hg19_v2_chr19_-_58220517_58220583	0.129331	GLI2	ENST00000512439.2|ZNF154|ENSG00000179909.11|zinc finger protein 154 	ENST00000426889.1|ZNF154|ENSG00000179909.11|zinc finger protein 154
hg19_v2_chr4_-_82393009_82393044	0.128841	GLI2	ENST00000436139.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr4_+_81951957_81952119	0.128612	GLI2	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chrX_+_17755563_17755618	0.128476	GLI2	ENST00000380045.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380041.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380043.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000398080.1|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila)
hg19_v2_chr20_+_55043647_55043751	0.128215	GLI2	ENST00000023939.4|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000395881.3|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000357348.5|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000449062.1|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000435342.2|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1
hg19_v2_chr1_-_2564423_2564437	0.128177	GLI2	ENST00000378412.3|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr11_-_116662593_116662620	0.127585	GLI2	ENST00000227665.4|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr11_-_111649015_111649030	0.127368	GLI2	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr1_+_150521876_150521901	0.127307	GLI2	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr6_+_29427548_29427548	0.12712	GLI2	ENST00000377132.1|OR2H1|ENSG00000204688.5|olfactory receptor, family 2, subfamily H, member 1
hg19_v2_chr5_+_102455968_102456013	0.127106	GLI2	ENST00000358359.3|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr5_-_89825328_89825422	0.126756	GLI2	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr10_-_75910789_75910821	0.126356	GLI2	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr7_+_140396756_140396804	0.125988	GLI2	ENST00000460088.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000472695.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr11_-_2906979_2907111	0.125228	GLI2	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr1_+_14026722_14026735	0.124786	GLI2	ENST00000376048.5|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chr12_-_112819896_112819896	0.124439	GLI2	ENST00000377560.5|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000430131.2|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550722.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550724.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4
hg19_v2_chr16_-_4817129_4817219	0.123657	GLI2	ENST00000545009.1|ZNF500|ENSG00000103199.9|zinc finger protein 500 	ENST00000219478.6|ZNF500|ENSG00000103199.9|zinc finger protein 500
hg19_v2_chr3_-_10334617_10334637	0.123377	GLI2	ENST00000429122.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000425479.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000335542.8|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr9_+_131218408_131218487	0.123279	GLI2	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr19_-_51875894_51875975	0.123141	GLI2	ENST00000600427.1|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence 	ENST00000595217.1|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence 	ENST00000221978.5|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence
hg19_v2_chr6_-_133084580_133084605	0.123058	GLI2	ENST00000525270.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000530536.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000524919.1|VNN2|ENSG00000112303.9|vanin 2
hg19_v2_chr5_-_141060389_141060439	0.1228	GLI2	ENST00000504448.1|ARAP3|ENSG00000120318.11|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
hg19_v2_chr20_+_57466461_57466482	0.122517	GLI2	ENST00000306090.10|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr6_-_84937314_84937372	0.121751	GLI2	ENST00000257766.4|KIAA1009|ENSG00000135315.7|KIAA1009 	ENST00000403245.3|KIAA1009|ENSG00000135315.7|KIAA1009
hg19_v2_chr16_+_57702099_57702202	0.121509	GLI2	ENST00000333493.4|GPR97|ENSG00000182885.12|G protein-coupled receptor 97 	ENST00000327655.6|GPR97|ENSG00000182885.12|G protein-coupled receptor 97
hg19_v2_chr22_+_25465786_25465936	0.121325	GLI2	ENST00000401395.1|KIAA1671|ENSG00000197077.8|KIAA1671
hg19_v2_chr22_-_46450024_46450110	0.12105	GLI2	ENST00000396008.2|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26 	ENST00000333761.1|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26
hg19_v2_chr11_-_407103_407195	0.121015	GLI2	ENST00000526395.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr20_+_43514315_43514319	0.12101	GLI2	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr13_+_114145310_114145436	0.120999	GLI2	ENST00000434316.2|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3 	ENST00000375391.1|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3
hg19_v2_chr4_-_187476721_187476721	0.120056	GLI2	ENST00000307161.5|MTNR1A|ENSG00000168412.6|melatonin receptor 1A
hg19_v2_chr19_-_19144243_19144368	0.120017	GLI2	ENST00000594445.1|SUGP2|ENSG00000064607.12|SURP and G patch domain containing 2 	ENST00000452918.2|SUGP2|ENSG00000064607.12|SURP and G patch domain containing 2 	ENST00000600377.1|SUGP2|ENSG00000064607.12|SURP and G patch domain containing 2 	ENST00000337018.6|SUGP2|ENSG00000064607.12|SURP and G patch domain containing 2
hg19_v2_chr1_-_1310530_1310603	0.119998	GLI2	ENST00000338370.3|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1 	ENST00000321751.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1 	ENST00000378853.3|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr3_+_138067666_138067745	0.119622	GLI2	ENST00000475711.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog 	ENST00000464896.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr19_-_45873642_45873876	0.119448	GLI2	ENST00000485403.2|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586856.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586131.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391940.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000221481.6|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391944.3|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391945.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2
hg19_v2_chr2_+_85132749_85132788	0.119373	GLI2	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr9_+_131218698_131218750	0.11931	GLI2	ENST00000434106.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000546203.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000446274.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000421776.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000432065.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr9_-_115653176_115653199	0.118698	GLI2	ENST00000374228.4|SLC46A2|ENSG00000119457.7|solute carrier family 46, member 2
hg19_v2_chr4_+_76649797_76650004	0.118245	GLI2	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr4_-_82393052_82393075	0.116221	GLI2	ENST00000335927.7|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000504863.1|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000264400.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr6_+_35704855_35704874	0.115926	GLI2	ENST00000288065.2|ARMC12|ENSG00000157343.4|armadillo repeat containing 12 	ENST00000373866.3|ARMC12|ENSG00000157343.4|armadillo repeat containing 12
hg19_v2_chr17_+_18647326_18647388	0.115908	GLI2	ENST00000395667.1|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000395665.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000308799.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000301938.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10
hg19_v2_chr19_-_39466396_39466550	0.115858	GLI2	ENST00000292852.4|FBXO17|ENSG00000269190.1|F-box protein 17
hg19_v2_chr16_-_71842941_71843016	0.115564	GLI2	ENST00000423132.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000433195.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569748.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000570017.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_-_73149921_73149971	0.114583	GLI2	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr9_-_130639997_130640022	0.11453	GLI2	ENST00000373176.1|AK1|ENSG00000106992.13|adenylate kinase 1
hg19_v2_chr16_+_30075595_30075636	0.11417	GLI2	ENST00000563060.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr12_-_57634475_57634532	0.114081	GLI2	ENST00000393825.1|NDUFA4L2|ENSG00000185633.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v2_chr7_-_151107106_151107129	0.113296	GLI2	ENST00000334493.6|WDR86|ENSG00000187260.11|WD repeat domain 86
hg19_v2_chr15_+_67430339_67430366	0.113111	GLI2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr1_+_27114589_27114712	0.112925	GLI2	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr4_+_3344141_3344178	0.112745	GLI2	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr2_-_74710078_74710142	0.112577	GLI2	ENST00000290418.4|CCDC142|ENSG00000135637.9|coiled-coil domain containing 142
hg19_v2_chr2_+_235860616_235860645	0.112257	GLI2	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chr11_-_111957451_111957522	0.112187	GLI2	ENST00000504148.2|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast) 	ENST00000541231.1|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast)
hg19_v2_chrX_+_47082408_47082460	0.11209	GLI2	ENST00000518022.1|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16 	ENST00000276052.6|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16
hg19_v2_chr16_+_68279207_68279252	0.111759	GLI2	ENST00000413021.2|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000565744.1|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000219345.5|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV
hg19_v2_chr6_+_116892641_116892726	0.111076	GLI2	ENST00000487832.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000518117.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr10_-_105238997_105238997	0.110771	GLI2	ENST00000369783.4|CALHM3|ENSG00000183128.7|calcium homeostasis modulator 3
hg19_v2_chr16_-_18468926_18468926	0.110343	GLI2	ENST00000545114.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chrX_+_103411189_103411301	0.110009	GLI2	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr8_+_94752349_94752349	0.109448	GLI2	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr3_-_119278376_119278403	0.109424	GLI2	ENST00000478182.1|CD80|ENSG00000121594.7|CD80 molecule
hg19_v2_chrX_+_12809463_12809607	0.109352	GLI2	ENST00000380663.3|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000380668.5|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000398491.2|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000489404.1|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2
hg19_v2_chr17_-_41116454_41116515	0.108758	GLI2	ENST00000427569.2|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1 	ENST00000430739.1|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1
hg19_v2_chr19_-_10530784_10530827	0.108711	GLI2	ENST00000593124.1|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr19_+_46806856_46806883	0.107912	GLI2	ENST00000300862.3|HIF3A|ENSG00000124440.11|hypoxia inducible factor 3, alpha subunit
hg19_v2_chr1_+_210111570_210111603	0.107862	GLI2	ENST00000367019.1|SYT14|ENSG00000143469.12|synaptotagmin XIV 	ENST00000472886.1|SYT14|ENSG00000143469.12|synaptotagmin XIV
hg19_v2_chr19_-_59031118_59031193	0.107715	GLI2	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr16_+_28996114_28996166	0.107706	GLI2	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr19_+_16178317_16178354	0.107238	GLI2	ENST00000344824.6|TPM4|ENSG00000167460.10|tropomyosin 4 	ENST00000538887.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr14_-_105262016_105262054	0.107087	GLI2	ENST00000407796.2|AKT1|ENSG00000142208.11|v-akt murine thymoma viral oncogene homolog 1
hg19_v2_chr12_-_109531264_109531300	0.106882	GLI2	ENST00000429722.2|ALKBH2|ENSG00000189046.6|alkB, alkylation repair homolog 2 (E. coli) 	ENST00000536242.1|ALKBH2|ENSG00000189046.6|alkB, alkylation repair homolog 2 (E. coli) 	ENST00000343075.3|ALKBH2|ENSG00000189046.6|alkB, alkylation repair homolog 2 (E. coli) 	ENST00000536358.1|ALKBH2|ENSG00000189046.6|alkB, alkylation repair homolog 2 (E. coli)
hg19_v2_chr14_+_74353320_74353469	0.10686	GLI2	ENST00000540593.1|ZNF410|ENSG00000119725.13|zinc finger protein 410 	ENST00000555730.1|ZNF410|ENSG00000119725.13|zinc finger protein 410
hg19_v2_chr12_+_57853918_57853934	0.106355	GLI2	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr11_-_31531121_31531192	0.106323	GLI2	ENST00000532287.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000526776.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000534812.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000529749.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000278200.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000530023.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000533642.1|IMMP1L|ENSG00000148950.5|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr11_+_134094508_134094617	0.106256	GLI2	ENST00000281187.5|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe) 	ENST00000525095.2|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe)
hg19_v2_chr14_-_105262055_105262107	0.105733	GLI2	ENST00000349310.3|AKT1|ENSG00000142208.11|v-akt murine thymoma viral oncogene homolog 1
hg19_v2_chr15_+_49447947_49448036	0.104583	GLI2	ENST00000327171.3|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560654.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr14_+_79746249_79746291	0.104528	GLI2	ENST00000428277.2|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr2_-_70475586_70475646	0.10429	GLI2	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr20_+_2795609_2795620	0.104265	GLI2	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr17_-_62050278_62050278	0.103959	GLI2	ENST00000578147.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit 	ENST00000435607.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit
hg19_v2_chr7_+_150498610_150498659	0.103021	GLI2	ENST00000461345.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr7_-_127032363_127032420	0.102992	GLI2	ENST00000393312.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr16_+_29984962_29984962	0.102727	GLI2	ENST00000308893.4|TAOK2|ENSG00000149930.13|TAO kinase 2
hg19_v2_chr12_+_72148614_72148699	0.102637	GLI2	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr7_-_229557_229557	0.10197	GLI2	ENST00000514988.1|AC145676.2|ENSG00000249852.1|Uncharacterized protein
hg19_v2_chr10_-_49459800_49459841	0.101462	GLI2	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr22_-_31688431_31688520	0.101453	GLI2	ENST00000402249.3|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000443175.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000215912.5|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000441972.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr1_-_2564450_2564481	0.100791	GLI2	ENST00000288709.6|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr3_+_32993065_32993074	0.100734	GLI2	ENST00000330953.5|CCR4|ENSG00000183813.6|chemokine (C-C motif) receptor 4
hg19_v2_chr12_-_120687948_120687971	0.100592	GLI2	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr1_-_153585539_153585559	0.100289	GLI2	ENST00000368706.4|S100A16|ENSG00000188643.6|S100 calcium binding protein A16
hg19_v2_chr5_+_140044261_140044464	0.0999611	GLI2	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr13_-_114103443_114103592	0.0996528	GLI2	ENST00000356501.4|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1 	ENST00000413169.2|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1
hg19_v2_chr19_-_42806444_42806500	0.0983649	GLI2	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr15_+_75315896_75315956	0.0981135	GLI2	ENST00000342932.3|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000564923.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000569562.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000568649.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase
hg19_v2_chr1_-_32403370_32403387	0.0976143	GLI2	ENST00000534796.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr5_-_138739739_138739793	0.0975008	GLI2	ENST00000514983.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000507779.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000451821.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000450845.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000509959.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000302091.5|SPATA24|ENSG00000170469.6|spermatogenesis associated 24
hg19_v2_chr16_+_30075783_30075818	0.097336	GLI2	ENST00000412304.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr19_+_10563567_10563617	0.0972926	GLI2	ENST00000344979.3|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr7_+_64363625_64363667	0.096862	GLI2	ENST00000476120.1|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000319636.5|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000545510.1|ZNF273|ENSG00000198039.7|zinc finger protein 273
hg19_v2_chr14_-_94759595_94759613	0.0964677	GLI2	ENST00000261994.4|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr9_+_131219179_131219198	0.0964477	GLI2	ENST00000372791.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr19_-_49522727_49522759	0.0959907	GLI2	ENST00000600007.1|CTB-60B18.10|ENSG00000268655.1|CTB-60B18.10
hg19_v2_chr17_-_7017968_7018021	0.0955867	GLI2	ENST00000355035.5|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr10_+_133918175_133918175	0.0955814	GLI2	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr2_-_97304105_97304116	0.094787	GLI2	ENST00000599854.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000441706.2|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr3_+_50606577_50606628	0.0945797	GLI2	ENST00000434410.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1 	ENST00000232854.4|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr19_-_23941639_23941672	0.0936958	GLI2	ENST00000395385.3|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000531570.1|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000528059.1|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr17_+_6554971_6554995	0.0934973	GLI2	ENST00000391428.2|C17orf100|ENSG00000212734.4|chromosome 17 open reading frame 100
hg19_v2_chr2_+_201936458_201936467	0.0934945	GLI2	ENST00000237889.4|NDUFB3|ENSG00000119013.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v2_chr12_-_82152444_82152475	0.0932553	GLI2	ENST00000549325.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000550584.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr2_-_169746878_169746970	0.0931891	GLI2	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr12_-_120966943_120966985	0.0925778	GLI2	ENST00000552443.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547736.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000445328.2|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547943.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000288532.6|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
hg19_v2_chr7_-_23053719_23053767	0.0920817	GLI2	ENST00000432176.2|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000440481.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr5_+_102455853_102455961	0.0916688	GLI2	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chrX_+_107334895_107334934	0.0907932	GLI2	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr17_-_7018128_7018150	0.0906021	GLI2	ENST00000380952.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2 	ENST00000254850.7|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr7_+_150498783_150498890	0.0903731	GLI2	ENST00000475536.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A 	ENST00000468689.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr5_+_140019004_140019068	0.0901982	GLI2	ENST00000394671.3|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000511410.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000537378.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6
hg19_v2_chr15_+_91478493_91478551	0.0899938	GLI2	ENST00000418476.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr4_+_38511367_38511408	0.0894818	GLI2	ENST00000507056.1|RP11-213G21.1|ENSG00000249667.1|RP11-213G21.1
hg19_v2_chr17_+_77030267_77030391	0.0893253	GLI2	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr3_+_50606901_50606967	0.0892725	GLI2	ENST00000455834.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr22_-_37608325_37608362	0.0891588	GLI2	ENST00000328544.3|SSTR3|ENSG00000183473.5|somatostatin receptor 3
hg19_v2_chr16_+_58497567_58497586	0.0888442	GLI2	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr2_+_186603545_186603622	0.0884356	GLI2	ENST00000424728.1|FSIP2|ENSG00000188738.9|fibrous sheath interacting protein 2
hg19_v2_chr12_+_110338323_110338414	0.088291	GLI2	ENST00000312777.5|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding 	ENST00000536408.2|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr7_-_27170352_27170418	0.0868355	GLI2	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr19_+_58790314_58790358	0.0867289	GLI2	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr6_+_35704804_35704813	0.0866231	GLI2	ENST00000373869.3|ARMC12|ENSG00000157343.4|armadillo repeat containing 12
hg19_v2_chr19_-_59070239_59070359	0.0859217	GLI2	ENST00000595957.1|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M 	ENST00000253023.3|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M
hg19_v2_chr12_-_10542617_10542647	0.0854213	GLI2	ENST00000240618.6|KLRK1|ENSG00000213809.4|killer cell lectin-like receptor subfamily K, member 1
hg19_v2_chr11_+_16760161_16760231	0.0852609	GLI2	ENST00000524439.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000422258.2|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000528634.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000525684.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58
hg19_v2_chr1_-_155826967_155827086	0.0851015	GLI2	ENST00000368331.1|GON4L|ENSG00000116580.14|gon-4-like (C. elegans) 	ENST00000361040.5|GON4L|ENSG00000116580.14|gon-4-like (C. elegans) 	ENST00000271883.5|GON4L|ENSG00000116580.14|gon-4-like (C. elegans)
hg19_v2_chr5_-_162887054_162887067	0.0847006	GLI2	ENST00000517501.1|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr7_-_91875109_91875260	0.0845465	GLI2	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chrX_+_70503433_70503517	0.0840608	GLI2	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr11_-_65430251_65430399	0.0838473	GLI2	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr22_-_51016433_51016451	0.0835961	GLI2	ENST00000405237.3|CPT1B|ENSG00000205560.8|carnitine palmitoyltransferase 1B (muscle)
hg19_v2_chr7_-_135433460_135433499	0.0834924	GLI2	ENST00000415751.1|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr1_+_154966058_154966066	0.082118	GLI2	ENST00000392487.1|LENEP|ENSG00000163352.5|lens epithelial protein
hg19_v2_chr1_+_1217489_1217576	0.081711	GLI2	ENST00000325425.8|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit 	ENST00000400928.3|SCNN1D|ENSG00000162572.15|sodium channel, non-voltage-gated 1, delta subunit
hg19_v2_chr19_-_40562063_40562143	0.0816712	GLI2	ENST00000598845.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000593605.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000221355.6|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000434248.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B
hg19_v2_chr19_-_48673552_48673578	0.0816549	GLI2	ENST00000536218.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent 	ENST00000596549.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent
hg19_v2_chr2_-_27886676_27886714	0.0813255	GLI2	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr1_-_47082495_47082563	0.081258	GLI2	ENST00000545730.1|MKNK1|ENSG00000079277.15|MAP kinase interacting serine/threonine kinase 1 	ENST00000531769.1|MKNK1|ENSG00000079277.15|MAP kinase interacting serine/threonine kinase 1 	ENST00000319928.3|MOB3C|ENSG00000142961.10|MOB kinase activator 3C
hg19_v2_chr4_-_140477353_140477400	0.0812365	GLI2	ENST00000406354.1|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7 	ENST00000506866.2|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr5_+_172332220_172332371	0.0797416	GLI2	ENST00000518247.1|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 	ENST00000326654.2|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chr5_-_162887071_162887166	0.0794278	GLI2	ENST00000302764.4|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr18_-_268019_268064	0.0794225	GLI2	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr5_+_140019079_140019105	0.0792123	GLI2	ENST00000252100.6|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6
hg19_v2_chr8_-_90996837_90996944	0.0791099	GLI2	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr14_+_50359773_50359850	0.0788095	GLI2	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr12_-_82152420_82152441	0.0786782	GLI2	ENST00000552948.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000548586.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr18_+_70536215_70536275	0.0786366	GLI2	ENST00000578967.1|RP11-676J15.1|ENSG00000263958.1|RP11-676J15.1
hg19_v2_chr17_+_1944790_1944828	0.0772887	GLI2	ENST00000575162.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr11_+_57308979_57308979	0.0772445	GLI2	ENST00000457912.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr8_+_96145974_96146041	0.0767997	GLI2	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr10_-_87551311_87551319	0.0767984	GLI2	ENST00000536331.1|GRID1|ENSG00000182771.13|glutamate receptor, ionotropic, delta 1
hg19_v2_chr18_+_45778672_45778672	0.0765286	GLI2	ENST00000600091.1|AC091150.1|ENSG00000268960.1|HCG1818186; Uncharacterized protein
hg19_v2_chr12_-_109125285_109125372	0.076445	GLI2	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr8_-_145653885_145653937	0.0760313	GLI2	ENST00000531032.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000292510.4|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000377348.2|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000530790.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000533806.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr9_+_80850952_80851267	0.0759707	GLI2	ENST00000424347.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000415759.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376597.4|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000277082.5|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376598.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa
hg19_v2_chr19_+_17638059_17638113	0.0756704	GLI2	ENST00000599164.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000449408.2|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000600871.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000599124.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr1_-_156918806_156918806	0.0755793	GLI2	ENST00000315174.8|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr2_+_241564655_241564668	0.075277	GLI2	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr3_-_50336548_50336742	0.0750888	GLI2	ENST00000450489.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000513170.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000450982.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3
hg19_v2_chr1_+_162531294_162531332	0.0749308	GLI2	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr12_-_110883346_110883392	0.0748715	GLI2	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr2_-_85895295_85895331	0.0748433	GLI2	ENST00000428225.1|SFTPB|ENSG00000168878.12|surfactant protein B 	ENST00000519937.2|SFTPB|ENSG00000168878.12|surfactant protein B
hg19_v2_chr5_+_149877334_149877354	0.0729446	GLI2	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr12_+_132568814_132569025	0.0727342	GLI2	ENST00000454179.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000389560.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000443539.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000392352.1|EP400NL|ENSG00000185684.8|EP400 N-terminal like
hg19_v2_chr7_+_99971068_99971128	0.0726409	GLI2	ENST00000198536.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000453419.1|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr4_-_84376953_84377040	0.0724078	GLI2	ENST00000510985.1|HELQ|ENSG00000163312.6|helicase, POLQ-like 	ENST00000295488.3|HELQ|ENSG00000163312.6|helicase, POLQ-like
hg19_v2_chr17_+_79935418_79935431	0.0719198	GLI2	ENST00000306729.7|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1 	ENST00000306739.4|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr7_+_30185406_30185417	0.0717595	GLI2	ENST00000324489.5|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr3_-_58652523_58652575	0.0716571	GLI2	ENST00000489857.1|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D 	ENST00000358781.2|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D
hg19_v2_chr19_-_49520338_49520367	0.0714124	GLI2	ENST00000221421.2|LHB|ENSG00000104826.7|luteinizing hormone beta polypeptide
hg19_v2_chr2_+_48010312_48010328	0.070836	GLI2	ENST00000540021.1|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr11_-_73720122_73720136	0.070584	GLI2	ENST00000426995.2|UCP3|ENSG00000175564.8|uncoupling protein 3 (mitochondrial, proton carrier)
hg19_v2_chr12_-_9885888_9885895	0.070572	GLI2	ENST00000327839.3|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr11_-_119217365_119217398	0.0704365	GLI2	ENST00000360167.4|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000445041.2|C1QTNF5|ENSG00000223953.3|C1q and tumor necrosis factor related protein 5 	ENST00000555262.1|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000449574.2|MFRP|ENSG00000235718.3|membrane frizzled-related protein
hg19_v2_chr8_-_134584092_134584143	0.0703779	GLI2	ENST00000522652.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr1_-_2718286_2718286	0.0703324	GLI2	ENST00000401094.6|TTC34|ENSG00000215912.7|tetratricopeptide repeat domain 34
hg19_v2_chr1_-_32110467_32110491	0.0703279	GLI2	ENST00000440872.2|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1 	ENST00000373703.4|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1
hg19_v2_chr17_-_7137582_7137637	0.0701055	GLI2	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr1_-_46089639_46089714	0.0697537	GLI2	ENST00000445048.2|CCDC17|ENSG00000159588.10|coiled-coil domain containing 17
hg19_v2_chr17_-_202579_202633	0.0695599	GLI2	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr17_+_74723031_74723047	0.0693083	GLI2	ENST00000586200.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr13_+_20532807_20532841	0.0692459	GLI2	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr10_-_46970474_46970515	0.0689143	GLI2	ENST00000503753.1|SYT15|ENSG00000204176.9|synaptotagmin XV 	ENST00000374321.4|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr9_+_135754263_135754338	0.0684273	GLI2	ENST00000356311.5|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9 	ENST00000350499.6|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9
hg19_v2_chr16_-_23724518_23724568	0.0681416	GLI2	ENST00000457008.2|ERN2|ENSG00000134398.8|endoplasmic reticulum to nucleus signaling 2
hg19_v2_chr14_-_51297197_51297327	0.0680628	GLI2	ENST00000382043.4|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr14_-_70826438_70826453	0.0680427	GLI2	ENST00000389912.6|COX16|ENSG00000133983.10|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v2_chr1_+_161195781_161195795	0.0679029	GLI2	ENST00000367988.3|TOMM40L|ENSG00000158882.8|translocase of outer mitochondrial membrane 40 homolog (yeast)-like
hg19_v2_chr5_-_137878887_137878989	0.067781	GLI2	ENST00000507939.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000572514.1|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000499810.2|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1 	ENST00000360541.5|ETF1|ENSG00000120705.8|eukaryotic translation termination factor 1
hg19_v2_chr2_+_87769459_87769476	0.0676773	GLI2	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chrX_+_52511761_52511769	0.0675629	GLI2	ENST00000399795.3|XAGE1C|ENSG00000183461.12|X antigen family, member 1C 	ENST00000375589.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr4_+_8271471_8271504	0.0673048	GLI2	ENST00000307358.2|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3 	ENST00000382512.3|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3
hg19_v2_chr2_-_97304009_97304074	0.0672521	GLI2	ENST00000431828.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000435669.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000440133.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000448075.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr9_+_87285257_87285311	0.0672368	GLI2	ENST00000323115.4|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr2_+_48010221_48010307	0.0670983	GLI2	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr3_-_167813672_167813763	0.0667732	GLI2	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr6_+_158402860_158403070	0.0663362	GLI2	ENST00000367122.2|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367121.3|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000355585.4|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367113.4|SYNJ2|ENSG00000078269.9|synaptojanin 2
hg19_v2_chrX_-_52546189_52546197	0.0663294	GLI2	ENST00000375570.1|XAGE1E|ENSG00000204375.5|X antigen family, member 1E 	ENST00000429372.2|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr5_-_102455801_102455855	0.0659442	GLI2	ENST00000508629.1|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1 	ENST00000399004.2|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1
hg19_v2_chr7_+_99971129_99971167	0.0654738	GLI2	ENST00000394000.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000350573.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr20_+_36974759_36974892	0.0654008	GLI2	ENST00000217407.2|LBP|ENSG00000129988.5|lipopolysaccharide binding protein
hg19_v2_chr10_-_48416849_48416859	0.0651611	GLI2	ENST00000249598.1|GDF2|ENSG00000128802.3|growth differentiation factor 2
hg19_v2_chr20_+_44509857_44509880	0.0646605	GLI2	ENST00000372523.1|ZSWIM1|ENSG00000168612.4|zinc finger, SWIM-type containing 1 	ENST00000372520.1|ZSWIM1|ENSG00000168612.4|zinc finger, SWIM-type containing 1
hg19_v2_chr3_+_11314099_11314122	0.0642839	GLI2	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chrX_-_52260355_52260363	0.0641903	GLI2	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chrX_+_49091920_49091942	0.064174	GLI2	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr20_-_62710832_62710879	0.0641626	GLI2	ENST00000395042.1|RGS19|ENSG00000171700.9|regulator of G-protein signaling 19
hg19_v2_chr21_+_34697258_34697336	0.0640295	GLI2	ENST00000442071.1|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1 	ENST00000442357.2|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chr19_-_37263693_37263716	0.0639937	GLI2	ENST00000591344.1|ZNF850|ENSG00000267041.1|zinc finger protein 850
hg19_v2_chr22_+_21336267_21336302	0.0639633	GLI2	ENST00000215739.8|LZTR1|ENSG00000099949.14|leucine-zipper-like transcription regulator 1
hg19_v2_chr19_+_4153598_4153665	0.0636955	GLI2	ENST00000078445.2|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000252587.3|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000595923.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602257.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602147.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3
hg19_v2_chr17_+_30677136_30677205	0.063391	GLI2	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr7_+_23145884_23145917	0.0630493	GLI2	ENST00000409689.1|KLHL7|ENSG00000122550.13|kelch-like family member 7 	ENST00000410047.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr13_+_113760098_113760121	0.0625434	GLI2	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr2_-_112237835_112237844	0.0624658	GLI2	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr1_+_3614591_3614622	0.0624267	GLI2	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr1_-_1310870_1310920	0.0623508	GLI2	ENST00000338338.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr4_+_56814968_56815037	0.0616652	GLI2	ENST00000422247.2|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr17_-_37558776_37558842	0.0616056	GLI2	ENST00000577399.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr19_+_40973049_40973126	0.0615718	GLI2	ENST00000598249.1|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000338932.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000344104.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4
hg19_v2_chr3_-_38178527_38178632	0.0614157	GLI2	ENST00000544624.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000444607.2|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000450296.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1
hg19_v2_chr1_-_16344500_16344568	0.0613762	GLI2	ENST00000406363.2|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000411503.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000545268.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000487046.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular)
hg19_v2_chr22_-_46373004_46373016	0.0612526	GLI2	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr16_+_15744078_15744133	0.0609947	GLI2	ENST00000396354.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1 	ENST00000570727.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1
hg19_v2_chr7_+_87257854_87257931	0.0606577	GLI2	ENST00000394654.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr17_+_46184911_46184951	0.060487	GLI2	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr18_-_60986962_60987019	0.0603173	GLI2	ENST00000333681.4|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_-_36807762_36807812	0.0601087	GLI2	ENST00000244751.2|CPNE5|ENSG00000124772.7|copine V
hg19_v2_chr8_+_74888417_74888485	0.0599608	GLI2	ENST00000517439.1|TMEM70|ENSG00000175606.6|transmembrane protein 70 	ENST00000312184.5|TMEM70|ENSG00000175606.6|transmembrane protein 70
hg19_v2_chr9_-_33264557_33264668	0.0599071	GLI2	ENST00000473781.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000488499.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr2_+_178977143_178977211	0.0591163	GLI2	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr2_-_183387283_183387304	0.0589428	GLI2	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr12_+_110338063_110338105	0.0588914	GLI2	ENST00000405876.4|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr2_+_37571845_37571874	0.0587737	GLI2	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr6_-_28367510_28367537	0.0587187	GLI2	ENST00000361028.1|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr10_+_112327425_112327516	0.05865	GLI2	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr22_+_41956767_41956852	0.0586248	GLI2	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr16_-_3285144_3285191	0.0577411	GLI2	ENST00000431561.3|ZNF200|ENSG00000010539.7|zinc finger protein 200 	ENST00000396870.4|ZNF200|ENSG00000010539.7|zinc finger protein 200
hg19_v2_chr8_-_37457350_37457382	0.0575469	GLI2	ENST00000519691.1|RP11-150O12.3|ENSG00000254290.1|RP11-150O12.3
hg19_v2_chr3_+_23958470_23958630	0.0572745	GLI2	ENST00000434031.2|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000413699.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000456530.2|RPL15|ENSG00000174748.14|ribosomal protein L15
hg19_v2_chr20_-_34330129_34330234	0.0571121	GLI2	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr11_-_89609185_89609185	0.0570158	GLI2	ENST00000329862.6|TRIM64B|ENSG00000189253.7|tripartite motif containing 64B
hg19_v2_chr22_-_37505588_37505607	0.0567051	GLI2	ENST00000406856.1|TMPRSS6|ENSG00000187045.12|transmembrane protease, serine 6
hg19_v2_chr15_+_81589254_81589272	0.0566219	GLI2	ENST00000394652.2|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr9_-_130742792_130742821	0.0561658	GLI2	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr3_+_195384929_195384964	0.0558045	GLI2	ENST00000457233.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000539252.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000452844.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000429897.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000539717.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000453324.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000445430.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000414625.2|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969 	ENST00000425425.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969
hg19_v2_chr7_-_151511911_151511962	0.0556299	GLI2	ENST00000392801.2|PRKAG2|ENSG00000106617.9|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
hg19_v2_chr17_-_39203519_39203568	0.0553721	GLI2	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr2_-_86790472_86790504	0.0552729	GLI2	ENST00000409727.1|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3
hg19_v2_chr6_+_43968306_43968377	0.0551788	GLI2	ENST00000442114.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000336600.5|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000439969.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223
hg19_v2_chr12_-_112037306_112037480	0.0549208	GLI2	ENST00000535949.1|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000542287.2|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000377617.3|ATXN2|ENSG00000204842.10|ataxin 2 	ENST00000550104.1|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr16_-_71843047_71843104	0.0545415	GLI2	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr19_-_16284286_16284336	0.0543946	GLI2	ENST00000379859.3|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3 	ENST00000269878.4|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3
hg19_v2_chr17_+_18996287_18996287	0.0542356	GLI2	ENST00000399091.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000443876.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000428928.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042
hg19_v2_chr20_+_35202909_35203075	0.0538185	GLI2	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr19_+_17337406_17337461	0.0537482	GLI2	ENST00000597836.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr17_-_3794021_3794042	0.0536022	GLI2	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr15_-_49447771_49447822	0.0533535	GLI2	ENST00000558843.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000542928.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000561248.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr19_+_35820064_35820115	0.0531985	GLI2	ENST00000341773.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600131.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000270311.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000595780.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000597916.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000593867.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600424.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000599811.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000536635.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000085219.5|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000544992.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000419549.2|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr10_-_105156198_105156248	0.0529607	GLI2	ENST00000369815.1|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000309579.3|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000337003.4|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse)
hg19_v2_chr16_+_84224780_84224791	0.0529412	GLI2	ENST00000315906.5|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr11_+_95523823_95523845	0.0528407	GLI2	ENST00000538658.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr7_+_87257701_87257770	0.052839	GLI2	ENST00000338056.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B 	ENST00000493037.1|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr2_+_172290707_172290764	0.052346	GLI2	ENST00000375255.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17 	ENST00000539783.1|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr3_-_179754806_179754872	0.0522401	GLI2	ENST00000485199.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr10_+_104474207_104474297	0.0520972	GLI2	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr12_-_123752624_123752835	0.05142	GLI2	ENST00000542174.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1 	ENST00000535796.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1
hg19_v2_chr22_-_50964849_50964903	0.0512459	GLI2	ENST00000543927.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein 	ENST00000423348.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein
hg19_v2_chr2_+_219283815_219283853	0.051001	GLI2	ENST00000248444.5|VIL1|ENSG00000127831.6|villin 1 	ENST00000454069.1|VIL1|ENSG00000127831.6|villin 1 	ENST00000392114.2|VIL1|ENSG00000127831.6|villin 1
hg19_v2_chr19_-_10613421_10613572	0.0506554	GLI2	ENST00000393623.2|KEAP1|ENSG00000079999.9|kelch-like ECH-associated protein 1
hg19_v2_chr14_-_106845789_106845851	0.0505829	GLI2	ENST00000390617.2|IGHV3-35|ENSG00000211957.2|immunoglobulin heavy variable 3-35 (non-functional)
hg19_v2_chr4_-_186732048_186732225	0.0496234	GLI2	ENST00000448662.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000439049.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000420158.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000431808.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319471.9|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr6_+_44214824_44214841	0.0495021	GLI2	ENST00000371646.5|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1 	ENST00000353801.3|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr20_+_31755934_31755974	0.049245	GLI2	ENST00000354932.5|BPIFA2|ENSG00000131050.6|BPI fold containing family A, member 2
hg19_v2_chr3_-_63849571_63849582	0.0490006	GLI2	ENST00000295899.5|THOC7|ENSG00000163634.7|THO complex 7 homolog (Drosophila)
hg19_v2_chr19_-_913160_913240	0.0484077	GLI2	ENST00000361574.5|R3HDM4|ENSG00000198858.5|R3H domain containing 4 	ENST00000587975.1|R3HDM4|ENSG00000198858.5|R3H domain containing 4
hg19_v2_chr7_+_48211048_48211063	0.0481808	GLI2	ENST00000435803.1|ABCA13|ENSG00000179869.10|ATP-binding cassette, sub-family A (ABC1), member 13
hg19_v2_chr1_+_200993071_200993094	0.0479946	GLI2	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr14_+_64932210_64932226	0.0479598	GLI2	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr16_+_89979826_89979826	0.0475733	GLI2	ENST00000555427.1|MC1R|ENSG00000258839.2|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
hg19_v2_chr17_-_19062424_19062424	0.0474349	GLI2	ENST00000399083.1|AC007952.6|ENSG00000197665.5|Uncharacterized protein
hg19_v2_chr6_+_24495185_24495209	0.0473855	GLI2	ENST00000348925.2|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chrX_+_19373700_19373845	0.0471083	GLI2	ENST00000379804.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr16_+_1306093_1306134	0.0461973	GLI2	ENST00000211076.3|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr16_-_67997947_67997968	0.0461791	GLI2	ENST00000537830.2|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4
hg19_v2_chr19_-_44008863_44008882	0.0460804	GLI2	ENST00000601646.1|PHLDB3|ENSG00000176531.6|pleckstrin homology-like domain, family B, member 3
hg19_v2_chr11_-_86383650_86383678	0.0457141	GLI2	ENST00000526944.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000530335.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000543262.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000524826.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr4_+_158142750_158142836	0.0452987	GLI2	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr1_+_153600869_153600940	0.045135	GLI2	ENST00000292169.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000368696.3|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000436839.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1
hg19_v2_chr11_+_66234216_66234424	0.0449072	GLI2	ENST00000349459.6|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000320740.7|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000524466.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3 	ENST00000526296.1|PELI3|ENSG00000174516.10|pellino E3 ubiquitin protein ligase family member 3
hg19_v2_chr14_+_23776167_23776189	0.0446267	GLI2	ENST00000554635.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557008.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough
hg19_v2_chr5_-_177659539_177659598	0.0441697	GLI2	ENST00000476170.2|PHYKPL|ENSG00000175309.10|5-phosphohydroxy-L-lysine phospho-lyase
hg19_v2_chr22_+_41258250_41258269	0.0440154	GLI2	ENST00000544094.1|XPNPEP3|ENSG00000196236.8|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
hg19_v2_chr14_-_106209368_106209408	0.0432432	GLI2	ENST00000390548.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker) 	ENST00000390549.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker) 	ENST00000390542.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v2_chr8_+_49984894_49984913	0.043239	GLI2	ENST00000522267.1|C8orf22|ENSG00000168333.9|chromosome 8 open reading frame 22 	ENST00000399653.4|C8orf22|ENSG00000168333.9|chromosome 8 open reading frame 22 	ENST00000303202.8|C8orf22|ENSG00000168333.9|chromosome 8 open reading frame 22
hg19_v2_chr20_-_61885826_61885892	0.0430517	GLI2	ENST00000370316.3|NKAIN4|ENSG00000101198.10|Na+/K+ transporting ATPase interacting 4
hg19_v2_chr11_-_67407031_67407031	0.0427586	GLI2	ENST00000335385.3|TBX10|ENSG00000167800.9|T-box 10
hg19_v2_chrY_+_2709527_2709653	0.0424728	GLI2	ENST00000250784.8|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr17_-_63556414_63556442	0.042076	GLI2	ENST00000585045.1|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr8_-_25902876_25902936	0.0418573	GLI2	ENST00000520164.1|EBF2|ENSG00000221818.4|early B-cell factor 2
hg19_v2_chr3_-_50336278_50336323	0.0416666	GLI2	ENST00000359051.3|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000417393.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000442620.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000452674.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related)
hg19_v2_chr17_-_7307358_7307456	0.0415036	GLI2	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr1_+_162351503_162351523	0.0411	GLI2	ENST00000458626.2|C1orf226|ENSG00000239887.3|chromosome 1 open reading frame 226
hg19_v2_chr6_-_90024967_90024993	0.0408814	GLI2	ENST00000602399.1|GABRR2|ENSG00000111886.9|gamma-aminobutyric acid (GABA) A receptor, rho 2
hg19_v2_chr7_-_91875358_91875480	0.0408363	GLI2	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr19_+_44220247_44220265	0.0402615	GLI2	ENST00000596627.1|IRGC|ENSG00000124449.6|immunity-related GTPase family, cinema
hg19_v2_chr16_+_616995_617041	0.039964	GLI2	ENST00000293874.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q 	ENST00000424439.2|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000540585.1|NHLRC4|ENSG00000257108.1|NHL repeat containing 4 	ENST00000409527.2|PIGQ|ENSG00000007541.10|phosphatidylinositol glycan anchor biosynthesis, class Q
hg19_v2_chr5_-_89770582_89770603	0.0398259	GLI2	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr19_+_782755_782833	0.0395907	GLI2	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr16_+_610407_610429	0.039569	GLI2	ENST00000409413.3|C16orf11|ENSG00000161992.5|chromosome 16 open reading frame 11
hg19_v2_chr4_+_40194609_40194616	0.0394293	GLI2	ENST00000508513.1|RHOH|ENSG00000168421.8|ras homolog family member H
hg19_v2_chr2_-_183387064_183387129	0.0393084	GLI2	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr1_+_6105974_6105985	0.0392944	GLI2	ENST00000378083.3|KCNAB2|ENSG00000069424.10|potassium voltage-gated channel, shaker-related subfamily, beta member 2
hg19_v2_chr17_+_80009741_80009834	0.0388034	GLI2	ENST00000578552.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000320548.4|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581578.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583885.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583641.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581418.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000355130.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000306823.6|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000392358.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr19_-_2702681_2702707	0.038732	GLI2	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr2_+_37571717_37571779	0.0385253	GLI2	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chrX_+_51075658_51075686	0.0383681	GLI2	ENST00000356450.2|NUDT10|ENSG00000122824.6|nudix (nucleoside diphosphate linked moiety X)-type motif 10
hg19_v2_chr19_-_10491234_10491352	0.0383469	GLI2	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr14_+_105391181_105391241	0.0376039	GLI2	ENST00000557573.1|PLD4|ENSG00000166428.8|phospholipase D family, member 4
hg19_v2_chr16_-_28303360_28303393	0.0374878	GLI2	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr17_-_79881408_79881423	0.0372421	GLI2	ENST00000392366.3|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr15_-_75918109_75918156	0.0370295	GLI2	ENST00000567134.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000308588.5|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chrX_-_2418936_2419024	0.0369845	GLI2	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr1_+_28696111_28696130	0.0365467	GLI2	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr10_+_98064085_98064163	0.0364144	GLI2	ENST00000419175.1|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase 	ENST00000371174.2|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase
hg19_v2_chr17_-_7137857_7137869	0.0364128	GLI2	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr1_-_53608289_53608315	0.036309	GLI2	ENST00000371491.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr3_+_49591881_49591940	0.0362595	GLI2	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr7_+_116312411_116312502	0.0356831	GLI2	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr2_-_160143242_160143310	0.0356104	GLI2	ENST00000359774.4|WDSUB1|ENSG00000196151.6|WD repeat, sterile alpha motif and U-box domain containing 1
hg19_v2_chr11_-_86383370_86383441	0.0355301	GLI2	ENST00000526834.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000359636.2|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr11_-_3400442_3400453	0.0350864	GLI2	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr9_-_123476612_123476698	0.0350562	GLI2	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr18_+_77794358_77794418	0.0350012	GLI2	ENST00000306735.5|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr16_+_2079501_2079528	0.0348104	GLI2	ENST00000563587.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr1_-_53608249_53608288	0.0347577	GLI2	ENST00000371494.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr12_-_110888103_110888212	0.0347114	GLI2	ENST00000426440.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa 	ENST00000228825.7|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chrY_+_2709906_2709961	0.0346734	GLI2	ENST00000430575.1|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr15_-_75918023_75918090	0.0334782	GLI2	ENST00000564644.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000371091.5|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000564675.1|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr20_-_33880204_33880234	0.033354	GLI2	ENST00000374408.3|FAM83C|ENSG00000125998.7|family with sequence similarity 83, member C
hg19_v2_chr14_-_94759361_94759403	0.0333213	GLI2	ENST00000393096.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr21_+_35014783_35014816	0.0329421	GLI2	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr17_-_54991369_54991388	0.03293	GLI2	ENST00000537230.1|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr22_+_50528308_50528439	0.0329037	GLI2	ENST00000545383.1|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 	ENST00000262794.5|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)
hg19_v2_chr3_-_49066811_49066851	0.0327772	GLI2	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr9_-_98269481_98269691	0.0324911	GLI2	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr12_+_120933904_120933923	0.0323952	GLI2	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr19_+_4969116_4969143	0.0322734	GLI2	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr5_-_179050066_179050170	0.0319595	GLI2	ENST00000329433.6|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510411.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr11_-_118047376_118047388	0.0319465	GLI2	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr14_-_94759408_94759434	0.0316042	GLI2	ENST00000554723.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr20_+_60698180_60698208	0.0304325	GLI2	ENST00000361670.3|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr19_+_44084696_44084790	0.030123	GLI2	ENST00000562255.1|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing 	ENST00000569031.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr16_+_55690205_55690352	0.0300822	GLI2	ENST00000379906.2|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr22_+_24115000_24115020	0.0300627	GLI2	ENST00000215743.3|MMP11|ENSG00000099953.5|matrix metallopeptidase 11 (stromelysin 3)
hg19_v2_chr20_+_33814457_33814506	0.0299485	GLI2	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr17_+_33288549_33288598	0.0299024	GLI2	ENST00000361952.3|ZNF830|ENSG00000198783.4|zinc finger protein 830
hg19_v2_chr1_+_35225339_35225343	0.0298456	GLI2	ENST00000339480.1|GJB4|ENSG00000189433.5|gap junction protein, beta 4, 30.3kDa
hg19_v2_chr7_-_55606346_55606366	0.0296588	GLI2	ENST00000545390.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr11_+_60739140_60739243	0.0296128	GLI2	ENST00000313421.7|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr16_-_89556942_89557020	0.02931	GLI2	ENST00000301030.4|ANKRD11|ENSG00000167522.10|ankyrin repeat domain 11
hg19_v2_chr1_+_40942887_40942997	0.0292679	GLI2	ENST00000372706.1|ZFP69|ENSG00000187815.5|ZFP69 zinc finger protein
hg19_v2_chr5_+_78532003_78532017	0.029192	GLI2	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr19_-_15343191_15343270	0.0290746	GLI2	ENST00000221730.3|EPHX3|ENSG00000105131.3|epoxide hydrolase 3
hg19_v2_chr5_-_150284351_150284443	0.0280044	GLI2	ENST00000427179.1|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr5_+_148724993_148725102	0.0275367	GLI2	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr16_+_72088376_72088537	0.0275241	GLI2	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr16_-_28506840_28506942	0.0268867	GLI2	ENST00000569430.1|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3
hg19_v2_chr5_+_98109322_98109350	0.0266728	GLI2	ENST00000513185.1|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr5_-_58571935_58571951	0.0262969	GLI2	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr8_-_133493200_133493352	0.0259942	GLI2	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr11_-_64815333_64815409	0.0259779	GLI2	ENST00000533842.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000532802.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000530139.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000526516.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1
hg19_v2_chr1_+_207669573_207669606	0.0256485	GLI2	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr5_-_150284532_150284549	0.0256297	GLI2	ENST00000394226.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000446148.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000274599.5|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000418587.2|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr17_+_39388700_39388715	0.0255736	GLI2	ENST00000411528.2|KRTAP9-3|ENSG00000204873.3|keratin associated protein 9-3
hg19_v2_chr4_+_95129061_95129198	0.0249514	GLI2	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr11_+_89764274_89764274	0.0243454	GLI2	ENST00000448984.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C 	ENST00000432771.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C
hg19_v2_chr19_-_46142637_46142678	0.0237941	GLI2	ENST00000590043.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000589876.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr19_-_49540073_49540152	0.0235389	GLI2	ENST00000301407.7|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1 	ENST00000604577.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000591656.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000601167.1|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1
hg19_v2_chr6_+_37400974_37401011	0.0235305	GLI2	ENST00000455891.1|CMTR1|ENSG00000137200.8|cap methyltransferase 1 	ENST00000373451.4|CMTR1|ENSG00000137200.8|cap methyltransferase 1
hg19_v2_chr2_+_11295498_11295610	0.0230984	GLI2	ENST00000295083.3|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3 	ENST00000441908.2|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3
hg19_v2_chr8_+_134203303_134203380	0.0226723	GLI2	ENST00000519433.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000517423.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000377863.2|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000220856.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr11_-_6640585_6640692	0.0226255	GLI2	ENST00000533371.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000528657.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000436873.2|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000299427.6|TPP1|ENSG00000166340.10|tripeptidyl peptidase I
hg19_v2_chr14_-_37051798_37051831	0.0222757	GLI2	ENST00000258829.5|NKX2-8|ENSG00000136327.6|NK2 homeobox 8
hg19_v2_chr15_+_69452959_69452987	0.021879	GLI2	ENST00000261858.2|GLCE|ENSG00000138604.5|glucuronic acid epimerase
hg19_v2_chr14_+_96968802_96968895	0.0216271	GLI2	ENST00000556619.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000392990.2|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr19_-_58874112_58874214	0.0212039	GLI2	ENST00000311044.3|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000595763.1|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000425453.3|ZNF497|ENSG00000174586.6|zinc finger protein 497
hg19_v2_chr5_-_150460914_150460997	0.0208555	GLI2	ENST00000389378.2|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr3_-_179754556_179754577	0.0206213	GLI2	ENST00000263962.8|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr11_+_60739115_60739137	0.0203707	GLI2	ENST00000344028.5|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000346437.4|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr3_+_42727011_42727034	0.0199321	GLI2	ENST00000287777.4|KLHL40|ENSG00000157119.11|kelch-like family member 40
hg19_v2_chr11_-_14380664_14380739	0.0194156	GLI2	ENST00000545643.1|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2 	ENST00000256196.4|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2
hg19_v2_chr8_-_86132568_86132650	0.0191681	GLI2	ENST00000321777.5|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000458398.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000431163.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000417663.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000524353.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000421308.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000545322.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000518562.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59
hg19_v2_chr1_-_41487383_41487402	0.0191139	GLI2	ENST00000302946.8|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000372613.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000439569.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000397197.2|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr19_-_13030071_13030115	0.0189367	GLI2	ENST00000293695.7|SYCE2|ENSG00000161860.7|synaptonemal complex central element protein 2
hg19_v2_chr2_-_71047727_71047733	0.0185516	GLI2	ENST00000272367.2|CLEC4F|ENSG00000152672.3|C-type lectin domain family 4, member F
hg19_v2_chr19_-_37407172_37407217	0.0184178	GLI2	ENST00000391711.3|ZNF829|ENSG00000185869.9|zinc finger protein 829
hg19_v2_chr17_+_7184986_7185076	0.0180444	GLI2	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chr10_+_120863587_120863631	0.0175167	GLI2	ENST00000535029.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000361432.2|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000544016.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A
hg19_v2_chr11_+_95523621_95523710	0.0174916	GLI2	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr5_+_140579162_140579348	0.0164685	GLI2	ENST00000536699.1|PCDHB11|ENSG00000197479.4|protocadherin beta 11 	ENST00000354757.3|PCDHB11|ENSG00000197479.4|protocadherin beta 11
hg19_v2_chr19_+_3585471_3585551	0.0164404	GLI2	ENST00000322315.5|GIPC3|ENSG00000179855.5|GIPC PDZ domain containing family, member 3
hg19_v2_chr16_+_68119324_68119364	0.0162659	GLI2	ENST00000349223.5|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr16_+_70488480_70488630	0.0162149	GLI2	ENST00000572784.1|FUK|ENSG00000157353.12|fucokinase 	ENST00000574784.1|FUK|ENSG00000157353.12|fucokinase 	ENST00000571514.1|FUK|ENSG00000157353.12|fucokinase 	ENST00000378912.2|FUK|ENSG00000157353.12|fucokinase 	ENST00000428974.2|FUK|ENSG00000157353.12|fucokinase 	ENST00000573352.1|FUK|ENSG00000157353.12|fucokinase 	ENST00000576453.1|FUK|ENSG00000157353.12|fucokinase
hg19_v2_chr10_-_35379241_35379294	0.0161684	GLI2	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr9_+_70971815_70971841	0.0160776	GLI2	ENST00000396392.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5 	ENST00000396396.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5
hg19_v2_chr5_-_218251_218330	0.0156588	GLI2	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr16_+_2083265_2083303	0.0154467	GLI2	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chrX_+_23685563_23685648	0.0153968	GLI2	ENST00000379341.4|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr12_-_57882577_57882614	0.0153339	GLI2	ENST00000393797.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr16_-_1031259_1031327	0.0151572	GLI2	ENST00000563837.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000570014.1|LMF1|ENSG00000103227.14|lipase maturation factor 1 	ENST00000563863.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2	ENST00000565069.1|RP11-161M6.2|ENSG00000260807.2|RP11-161M6.2
hg19_v2_chr11_+_64009072_64009220	0.0148854	GLI2	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr1_+_41174988_41175047	0.0148538	GLI2	ENST00000372652.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr7_-_73153178_73153197	0.0147242	GLI2	ENST00000437775.2|ABHD11|ENSG00000106077.14|abhydrolase domain containing 11 	ENST00000222800.3|ABHD11|ENSG00000106077.14|abhydrolase domain containing 11
hg19_v2_chr16_+_28565230_28565257	0.0147072	GLI2	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr16_+_88872176_88872176	0.0145612	GLI2	ENST00000569140.1|CDT1|ENSG00000167513.4|chromatin licensing and DNA replication factor 1
hg19_v2_chr1_-_45308616_45308735	0.0142699	GLI2	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr7_+_100612904_100612904	0.0139973	GLI2	ENST00000379442.3|MUC12|ENSG00000205277.5|mucin 12, cell surface associated 	ENST00000536621.1|MUC12|ENSG00000205277.5|mucin 12, cell surface associated
hg19_v2_chr8_-_67525524_67525543	0.0138379	GLI2	ENST00000517885.1|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chrX_+_23685653_23685681	0.0137453	GLI2	ENST00000379331.3|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr12_-_11422739_11422812	0.0136481	GLI2	ENST00000279573.7|PRB3|ENSG00000197870.8|proline-rich protein BstNI subfamily 3
hg19_v2_chr7_+_130131907_130131947	0.0130711	GLI2	ENST00000223215.4|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000437945.1|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr11_+_113258495_113258513	0.0129653	GLI2	ENST00000303941.3|ANKK1|ENSG00000170209.4|ankyrin repeat and kinase domain containing 1
hg19_v2_chr8_+_48920960_48921011	0.0124662	GLI2	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr15_-_69113218_69113250	0.0124482	GLI2	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr1_+_36554470_36554519	0.0124198	GLI2	ENST00000373178.4|ADPRHL2|ENSG00000116863.10|ADP-ribosylhydrolase like 2
hg19_v2_chr20_-_61051026_61051057	0.0123688	GLI2	ENST00000252997.2|GATA5|ENSG00000130700.6|GATA binding protein 5
hg19_v2_chrX_-_148669116_148669116	0.0120204	GLI2	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chr16_+_56385290_56385353	0.0118782	GLI2	ENST00000564727.1|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr16_+_1306060_1306088	0.0116267	GLI2	ENST00000397534.2|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr1_-_34630820_34630875	0.0111896	GLI2	ENST00000373381.4|CSMD2|ENSG00000121904.13|CUB and Sushi multiple domains 2
hg19_v2_chr2_+_73144604_73144654	0.0110453	GLI2	ENST00000258106.6|EMX1|ENSG00000135638.9|empty spiracles homeobox 1
hg19_v2_chr17_+_7487146_7487211	0.010975	GLI2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr9_+_136215044_136215086	0.0109289	GLI2	ENST00000323345.6|RPL7A|ENSG00000148303.12|ribosomal protein L7a
hg19_v2_chr19_+_54694119_54694214	0.0108408	GLI2	ENST00000456872.1|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000302937.4|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000429671.2|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit
hg19_v2_chr9_+_33817461_33817565	0.0106763	GLI2	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr12_+_7917812_7917812	0.010249	GLI2	ENST00000382119.1|NANOGNB|ENSG00000205857.1|NANOG neighbor homeobox
hg19_v2_chr16_-_850723_850741	0.0100819	GLI2	ENST00000248150.4|GNG13|ENSG00000127588.4|guanine nucleotide binding protein (G protein), gamma 13
hg19_v2_chr1_-_41487415_41487426	0.0100423	GLI2	ENST00000372611.1|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chrX_+_148863584_148863612	0.00995094	GLI2	ENST00000439010.2|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000298974.5|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000522429.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000519822.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9
hg19_v2_chr4_-_55991752_55991770	0.0097974	GLI2	ENST00000263923.4|KDR|ENSG00000128052.8|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v2_chr11_+_31531291_31531345	0.00903512	GLI2	ENST00000350638.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000379163.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000395934.2|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4
hg19_v2_chr18_+_268148_268188	0.00901895	GLI2	ENST00000581677.1|RP11-705O1.8|ENSG00000263884.1|RP11-705O1.8
hg19_v2_chr20_+_3190006_3190178	0.00897597	GLI2	ENST00000380113.3|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 	ENST00000455664.2|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 	ENST00000399838.3|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
hg19_v2_chr10_-_103454876_103455016	0.0086505	GLI2	ENST00000331272.7|FBXW4|ENSG00000107829.9|F-box and WD repeat domain containing 4
hg19_v2_chr7_-_75452673_75452691	0.00863175	GLI2	ENST00000416943.1|CCL24|ENSG00000106178.2|chemokine (C-C motif) ligand 24
hg19_v2_chr3_-_46759314_46759340	0.00861969	GLI2	ENST00000315170.7|PRSS50|ENSG00000206549.8|protease, serine, 50
hg19_v2_chr4_-_71705590_71705662	0.00845095	GLI2	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr7_-_134001663_134001803	0.00828334	GLI2	ENST00000378509.4|SLC35B4|ENSG00000205060.6|solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
hg19_v2_chr3_+_153839149_153839251	0.00824664	GLI2	ENST00000465093.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26 	ENST00000465817.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26
hg19_v2_chr20_+_36932521_36932532	0.00804755	GLI2	ENST00000262865.4|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr17_+_31255165_31255228	0.00792812	GLI2	ENST00000578289.1|TMEM98|ENSG00000006042.7|transmembrane protein 98 	ENST00000439138.1|TMEM98|ENSG00000006042.7|transmembrane protein 98
hg19_v2_chr5_+_152870106_152870188	0.00774225	GLI2	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr17_+_29248953_29248978	0.00637016	GLI2	ENST00000581285.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr5_+_80597419_80597448	0.00598792	GLI2	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr11_-_64646086_64646191	0.00580128	GLI2	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr17_-_9929581_9929626	0.00576706	GLI2	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr2_+_241544834_241544862	0.00563608	GLI2	ENST00000319838.5|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000403859.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000438013.2|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr16_+_50059125_50059180	0.00522463	GLI2	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr7_-_4923315_4923360	0.00517252	GLI2	ENST00000399583.3|RADIL|ENSG00000157927.12|Ras association and DIL domains
hg19_v2_chr3_-_23958402_23958488	0.00500597	GLI2	ENST00000415901.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000416026.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000412028.1|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000388759.3|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000437230.1|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1
hg19_v2_chr11_-_117103208_117103288	0.00497193	GLI2	ENST00000320934.3|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7 	ENST00000530269.1|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7
hg19_v2_chr3_+_127317066_127317066	0.00496831	GLI2	ENST00000265056.7|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr7_-_141401951_141401985	0.00469713	GLI2	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr17_-_27224621_27224759	0.00453013	GLI2	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr16_+_28834531_28834588	0.00451603	GLI2	ENST00000570200.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chr10_-_102989551_102989551	0.00424761	GLI2	ENST00000370193.2|LBX1|ENSG00000138136.5|ladybird homeobox 1
hg19_v2_chr17_+_29158962_29159046	0.00419382	GLI2	ENST00000321990.4|ATAD5|ENSG00000176208.4|ATPase family, AAA domain containing 5
hg19_v2_chr20_-_896960_896978	0.00366284	GLI2	ENST00000381922.3|ANGPT4|ENSG00000101280.6|angiopoietin 4 	ENST00000546022.1|ANGPT4|ENSG00000101280.6|angiopoietin 4
hg19_v2_chr19_+_45582453_45582551	0.00352442	GLI2	ENST00000591607.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000591747.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000270257.4|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000391951.2|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000587566.1|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr19_+_7694623_7694710	0.00321359	GLI2	ENST00000594797.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000456958.3|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000601406.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae)
hg19_v2_chr3_-_45957088_45957112	0.00313554	GLI2	ENST00000539217.1|LZTFL1|ENSG00000163818.12|leucine zipper transcription factor-like 1
hg19_v2_chr10_-_105212141_105212183	0.00264056	GLI2	ENST00000369788.3|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr6_+_88182643_88182722	0.00253484	GLI2	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr17_-_54991395_54991453	0.00235735	GLI2	ENST00000316881.4|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr16_+_84224740_84224746	0.00218765	GLI2	ENST00000268624.3|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr13_-_60738003_60738121	0.00206522	GLI2	ENST00000400330.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400324.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr7_-_4923259_4923310	0.00184941	GLI2	ENST00000536091.1|RADIL|ENSG00000157927.12|Ras association and DIL domains
hg19_v2_chr2_+_223536428_223536505	0.00166944	GLI2	ENST00000446656.3|MOGAT1|ENSG00000124003.9|monoacylglycerol O-acyltransferase 1
hg19_v2_chr18_+_77794446_77794505	0.00121473	GLI2	ENST00000262197.7|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr9_-_136242909_136242953	0.00114916	GLI2	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr3_-_25824925_25825042	0.00107838	GLI2	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr19_+_2389784_2389784	0.000772863	GLI2	ENST00000332578.3|TMPRSS9|ENSG00000178297.8|transmembrane protease, serine 9
hg19_v2_chr19_+_708910_708975	0.000646323	GLI2	ENST00000264560.7|PALM|ENSG00000099864.13|paralemmin
hg19_v2_chr10_-_127511658_127511788	0.000536936	GLI2	ENST00000368774.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase 	ENST00000368778.3|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
