hg19_v2_chr19_-_10697895_10697993	1.39034	HOXA1	ENST00000591240.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000589684.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000591676.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000250244.6|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit 	ENST00000590923.1|AP1M2|ENSG00000129354.7|adaptor-related protein complex 1, mu 2 subunit
hg19_v2_chr1_+_183155373_183155423	0.364137	HOXA1	ENST00000493293.1|LAMC2|ENSG00000058085.10|laminin, gamma 2 	ENST00000264144.4|LAMC2|ENSG00000058085.10|laminin, gamma 2
hg19_v2_chr5_+_167181917_167181979	0.363128	HOXA1	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr19_+_54371114_54371180	0.35806	HOXA1	ENST00000448420.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000439000.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391770.4|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391771.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker
hg19_v2_chr12_-_85306562_85306591	0.315596	HOXA1	ENST00000551612.1|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15 	ENST00000450363.3|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15 	ENST00000552192.1|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15
hg19_v2_chr16_+_71660079_71660102	0.314848	HOXA1	ENST00000565261.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000268485.3|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000299952.4|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr16_+_71660052_71660071	0.304152	HOXA1	ENST00000567566.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr12_-_95510743_95510753	0.302739	HOXA1	ENST00000551521.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr4_+_113970772_113970885	0.287508	HOXA1	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr1_+_2005425_2005537	0.279409	HOXA1	ENST00000461106.2|PRKCZ|ENSG00000067606.11|protein kinase C, zeta
hg19_v2_chr8_+_37887772_37887859	0.239698	HOXA1	ENST00000338825.4|EIF4EBP1|ENSG00000187840.4|eukaryotic translation initiation factor 4E binding protein 1
hg19_v2_chr12_-_85306594_85306655	0.222238	HOXA1	ENST00000266682.5|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15
hg19_v2_chr3_-_112564797_112564797	0.221807	HOXA1	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr1_+_86889769_86889793	0.211523	HOXA1	ENST00000370565.4|CLCA2|ENSG00000137975.7|chloride channel accessory 2
hg19_v2_chr7_-_22233442_22233527	0.209749	HOXA1	ENST00000401957.2|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr20_-_30458491_30458550	0.208694	HOXA1	ENST00000339738.5|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr16_+_75256507_75256511	0.196382	HOXA1	ENST00000495583.1|CTRB1|ENSG00000168925.6|chymotrypsinogen B1
hg19_v2_chr2_+_65215604_65215625	0.195223	HOXA1	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr10_-_105615164_105615323	0.191307	HOXA1	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr6_+_80129989_80130014	0.189172	HOXA1	ENST00000429444.1|RP1-232L24.3|ENSG00000231533.1|RP1-232L24.3
hg19_v2_chr1_+_107682629_107682765	0.175099	HOXA1	ENST00000370074.4|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370073.2|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370071.2|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000542803.1|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370061.3|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370072.3|NTNG1|ENSG00000162631.14|netrin G1 	ENST00000370070.2|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr1_+_107683436_107683476	0.172463	HOXA1	ENST00000370068.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr1_+_205473720_205473732	0.169644	HOXA1	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chr11_-_72353451_72353492	0.167821	HOXA1	ENST00000376450.3|PDE2A|ENSG00000186642.11|phosphodiesterase 2A, cGMP-stimulated
hg19_v2_chr6_+_90272027_90272120	0.162141	HOXA1	ENST00000522441.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr2_-_75788038_75788089	0.160563	HOXA1	ENST00000393913.3|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans) 	ENST00000410113.1|EVA1A|ENSG00000115363.9|eva-1 homolog A (C. elegans)
hg19_v2_chr9_-_5304432_5304719	0.158217	HOXA1	ENST00000416837.1|RLN2|ENSG00000107014.7|relaxin 2 	ENST00000308420.3|RLN2|ENSG00000107014.7|relaxin 2
hg19_v2_chr2_+_1488435_1488560	0.155503	HOXA1	ENST00000446278.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000469607.1|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr16_+_23847267_23847335	0.153137	HOXA1	ENST00000321728.7|PRKCB|ENSG00000166501.8|protein kinase C, beta
hg19_v2_chr20_+_52105495_52105495	0.151891	HOXA1	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr2_-_71062938_71062952	0.14441	HOXA1	ENST00000410009.3|CD207|ENSG00000116031.7|CD207 molecule, langerin
hg19_v2_chr12_-_52911718_52911760	0.137723	HOXA1	ENST00000548409.1|KRT5|ENSG00000186081.7|keratin 5
hg19_v2_chr15_+_48009541_48009676	0.137683	HOXA1	ENST00000536845.2|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENST00000558816.1|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v2_chr19_-_38746979_38747050	0.119808	HOXA1	ENST00000591291.1|PPP1R14A|ENSG00000167641.6|protein phosphatase 1, regulatory (inhibitor) subunit 14A
hg19_v2_chr6_+_121756809_121756838	0.119483	HOXA1	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr15_-_63674034_63674053	0.118694	HOXA1	ENST00000344366.3|CA12|ENSG00000074410.9|carbonic anhydrase XII 	ENST00000422263.2|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr5_+_54398463_54398480	0.117901	HOXA1	ENST00000274306.6|GZMA|ENSG00000145649.7|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
hg19_v2_chr6_+_31021225_31021277	0.117454	HOXA1	ENST00000565192.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000562344.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr5_+_36152179_36152277	0.115097	HOXA1	ENST00000508514.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 	ENST00000513151.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 	ENST00000546211.1|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr15_+_84908573_84908671	0.115043	HOXA1	ENST00000424966.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4 	ENST00000422563.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr10_+_98741041_98741041	0.1053	HOXA1	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chr12_+_75728419_75728476	0.1052	HOXA1	ENST00000378695.4|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1 	ENST00000312442.2|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1
hg19_v2_chr15_-_63674218_63674360	0.103701	HOXA1	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr5_+_36152091_36152114	0.103051	HOXA1	ENST00000274254.5|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr7_-_994302_994333	0.102289	HOXA1	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr8_-_91095099_91095113	0.102084	HOXA1	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr17_-_8027402_8027432	0.101618	HOXA1	ENST00000541682.2|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000317814.4|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000577735.1|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7
hg19_v2_chr9_+_124329336_124329406	0.0999842	HOXA1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr8_+_1993173_1993199	0.0988825	HOXA1	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr6_+_31021973_31021990	0.0986815	HOXA1	ENST00000570223.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000566475.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000426185.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr1_-_24469602_24469675	0.0985359	HOXA1	ENST00000270800.1|IL22RA1|ENSG00000142677.3|interleukin 22 receptor, alpha 1
hg19_v2_chr7_-_101212244_101212286	0.0975585	HOXA1	ENST00000451953.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000434537.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000437900.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007
hg19_v2_chr7_-_100808394_100808436	0.0970974	HOXA1	ENST00000445482.2|VGF|ENSG00000128564.5|VGF nerve growth factor inducible
hg19_v2_chr7_-_100808843_100808874	0.0948021	HOXA1	ENST00000249330.2|VGF|ENSG00000128564.5|VGF nerve growth factor inducible
hg19_v2_chr19_-_51141196_51141302	0.0918246	HOXA1	ENST00000338916.4|SYT3|ENSG00000213023.5|synaptotagmin III
hg19_v2_chrX_+_82763265_82763283	0.0916969	HOXA1	ENST00000373200.2|POU3F4|ENSG00000196767.4|POU class 3 homeobox 4
hg19_v2_chrX_+_130192318_130192331	0.0908717	HOXA1	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr18_+_11752040_11752117	0.0873371	HOXA1	ENST00000423027.3|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr1_-_153513170_153513170	0.0871972	HOXA1	ENST00000368717.2|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr8_+_1993152_1993168	0.0852527	HOXA1	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr21_-_46340884_46341048	0.0844425	HOXA1	ENST00000302347.5|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000517819.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr5_+_36152163_36152174	0.0837885	HOXA1	ENST00000274255.6|SKP2|ENSG00000145604.11|S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
hg19_v2_chr8_+_86099884_86099920	0.0772666	HOXA1	ENST00000517476.1|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding 	ENST00000521429.1|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr9_+_113431059_113431077	0.0765555	HOXA1	ENST00000416899.2|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr3_+_14444063_14444133	0.0762001	HOXA1	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr17_-_15501932_15501932	0.0759087	HOXA1	ENST00000583965.1|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr19_-_42927251_42927355	0.0756881	HOXA1	ENST00000597001.1|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr18_-_74207146_74207183	0.0755493	HOXA1	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr7_+_79765071_79765103	0.0752995	HOXA1	ENST00000457358.2|GNAI1|ENSG00000127955.11|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
hg19_v2_chr1_+_45140360_45140399	0.0752627	HOXA1	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr15_+_71839566_71839581	0.0740732	HOXA1	ENST00000357769.4|THSD4|ENSG00000187720.10|thrombospondin, type I, domain containing 4
hg19_v2_chr7_-_3214287_3214287	0.0735398	HOXA1	ENST00000404626.3|AC091801.1|ENSG00000217455.4|LOC392621; Uncharacterized protein
hg19_v2_chr1_+_12916941_12916941	0.0730655	HOXA1	ENST00000240189.2|PRAMEF2|ENSG00000120952.4|PRAME family member 2
hg19_v2_chr4_-_123542224_123542224	0.0721788	HOXA1	ENST00000264497.3|IL21|ENSG00000138684.3|interleukin 21
hg19_v2_chr8_-_119124045_119124097	0.0715509	HOXA1	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr9_+_125281420_125281420	0.07128	HOXA1	ENST00000340750.1|OR1J4|ENSG00000239590.1|olfactory receptor, family 1, subfamily J, member 4
hg19_v2_chr4_-_90229142_90229217	0.0712778	HOXA1	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr9_+_113431029_113431051	0.0703105	HOXA1	ENST00000189978.5|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase 	ENST00000374448.4|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase 	ENST00000374440.3|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr16_+_30034655_30034722	0.069723	HOXA1	ENST00000300575.2|C16orf92|ENSG00000167194.3|chromosome 16 open reading frame 92
hg19_v2_chr20_+_31669333_31669333	0.0674672	HOXA1	ENST00000375483.3|BPIFB4|ENSG00000186191.7|BPI fold containing family B, member 4
hg19_v2_chr14_-_77965151_77965210	0.0661664	HOXA1	ENST00000393684.3|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000493585.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000554801.2|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000342219.4|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000412904.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000429906.1|ISM2|ENSG00000100593.13|isthmin 2
hg19_v2_chr3_+_132757215_132757261	0.0652736	HOXA1	ENST00000321871.6|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000393130.3|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000514894.1|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000512662.1|TMEM108|ENSG00000144868.9|transmembrane protein 108
hg19_v2_chr11_+_61248583_61248600	0.0650609	HOXA1	ENST00000432063.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32 	ENST00000338608.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32
hg19_v2_chr7_+_139529040_139529073	0.0644024	HOXA1	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr19_-_51192661_51192661	0.0643712	HOXA1	ENST00000391813.1|SHANK1|ENSG00000161681.11|SH3 and multiple ankyrin repeat domains 1
hg19_v2_chr7_+_97736197_97736211	0.0632203	HOXA1	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr7_+_139528952_139529038	0.0629324	HOXA1	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr19_+_5681153_5681193	0.0622075	HOXA1	ENST00000579559.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000577222.1|RPL36|ENSG00000130255.8|ribosomal protein L36
hg19_v2_chr6_-_154677900_154677944	0.0618232	HOXA1	ENST00000265198.4|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1 	ENST00000520261.1|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1
hg19_v2_chr3_-_113918254_113918254	0.0615597	HOXA1	ENST00000460779.1|DRD3|ENSG00000151577.8|dopamine receptor D3
hg19_v2_chr14_+_24779340_24779371	0.059875	HOXA1	ENST00000533293.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2 	ENST00000543919.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr19_+_19144384_19144473	0.0585168	HOXA1	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chr9_-_130679257_130679336	0.0576708	HOXA1	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr11_+_7626950_7626971	0.0571036	HOXA1	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr19_-_11450249_11450350	0.0567488	HOXA1	ENST00000222120.3|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family
hg19_v2_chr2_-_49381572_49381639	0.0561675	HOXA1	ENST00000454032.1|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor 	ENST00000304421.4|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor
hg19_v2_chr2_-_49381646_49381676	0.0556451	HOXA1	ENST00000346173.3|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor 	ENST00000406846.2|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor
hg19_v2_chr1_+_165864800_165864818	0.0553615	HOXA1	ENST00000469256.2|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chrX_+_139791917_139791938	0.0551567	HOXA1	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chrX_+_37639302_37639326	0.0551195	HOXA1	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr17_-_27278445_27278624	0.0548437	HOXA1	ENST00000268756.3|PHF12|ENSG00000109118.9|PHD finger protein 12 	ENST00000584685.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr7_+_20370746_20370778	0.0545381	HOXA1	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr21_-_32185570_32185592	0.0540775	HOXA1	ENST00000329621.4|KRTAP8-1|ENSG00000183640.4|keratin associated protein 8-1
hg19_v2_chr6_+_73331520_73331578	0.0536302	HOXA1	ENST00000342056.2|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5 	ENST00000355194.4|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5
hg19_v2_chr6_+_24775641_24775710	0.053606	HOXA1	ENST00000378054.2|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor 	ENST00000476555.1|GMNN|ENSG00000112312.5|geminin, DNA replication inhibitor
hg19_v2_chr5_-_137071689_137071709	0.0531926	HOXA1	ENST00000505853.1|KLHL3|ENSG00000146021.10|kelch-like family member 3
hg19_v2_chrX_+_128913906_128913960	0.0517339	HOXA1	ENST00000356892.3|SASH3|ENSG00000122122.9|SAM and SH3 domain containing 3
hg19_v2_chr7_-_44180884_44180937	0.0511396	HOXA1	ENST00000458240.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000223364.3|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr1_-_207095324_207095357	0.0495767	HOXA1	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr16_-_55867146_55867249	0.0491767	HOXA1	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr4_+_177241094_177241173	0.0486521	HOXA1	ENST00000503362.1|SPCS3|ENSG00000129128.8|signal peptidase complex subunit 3 homolog (S. cerevisiae)
hg19_v2_chr7_+_23637763_23637780	0.0481503	HOXA1	ENST00000410069.1|CCDC126|ENSG00000169193.7|coiled-coil domain containing 126
hg19_v2_chr16_+_23847339_23847350	0.0478694	HOXA1	ENST00000303531.7|PRKCB|ENSG00000166501.8|protein kinase C, beta
hg19_v2_chr13_-_20077417_20077419	0.0474169	HOXA1	ENST00000382978.1|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000400230.2|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000255310.6|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
hg19_v2_chr1_-_201096312_201096312	0.0470874	HOXA1	ENST00000449188.2|ASCL5|ENSG00000232237.2|achaete-scute family bHLH transcription factor 5
hg19_v2_chr1_-_205391178_205391214	0.0470204	HOXA1	ENST00000367153.4|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367151.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000391936.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367149.3|LEMD1|ENSG00000186007.5|LEM domain containing 1
hg19_v2_chr16_-_9030515_9030586	0.0468884	HOXA1	ENST00000535863.1|USP7|ENSG00000187555.10|ubiquitin specific peptidase 7 (herpes virus-associated) 	ENST00000381886.4|USP7|ENSG00000187555.10|ubiquitin specific peptidase 7 (herpes virus-associated)
hg19_v2_chrX_+_150148976_150148990	0.0463773	HOXA1	ENST00000419110.1|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr20_-_30458432_30458483	0.0460142	HOXA1	ENST00000375966.4|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15 	ENST00000278979.3|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr10_+_7745303_7745363	0.0456481	HOXA1	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr16_+_29674540_29674600	0.0445437	HOXA1	ENST00000436527.1|SPN|ENSG00000197471.7|sialophorin 	ENST00000360121.3|SPN|ENSG00000197471.7|sialophorin 	ENST00000449759.1|QPRT|ENSG00000103485.13|quinolinate phosphoribosyltransferase
hg19_v2_chr14_-_81408093_81408129	0.0444788	HOXA1	ENST00000555265.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr10_+_62538089_62538244	0.0443828	HOXA1	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr8_+_98788003_98788054	0.0441954	HOXA1	ENST00000521545.2|LAPTM4B|ENSG00000104341.12|lysosomal protein transmembrane 4 beta
hg19_v2_chr17_+_60447579_60447579	0.043908	HOXA1	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr11_+_61717279_61717300	0.0438163	HOXA1	ENST00000378043.4|BEST1|ENSG00000167995.11|bestrophin 1
hg19_v2_chr1_-_113498943_113498980	0.0436448	HOXA1	ENST00000369626.3|SLC16A1|ENSG00000155380.7|solute carrier family 16 (monocarboxylate transporter), member 1
hg19_v2_chr5_+_63802109_63802139	0.0432567	HOXA1	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr20_+_44036620_44036658	0.043083	HOXA1	ENST00000372710.3|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr7_+_100136811_100136882	0.0428371	HOXA1	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr11_+_61717336_61717356	0.0419908	HOXA1	ENST00000378042.3|BEST1|ENSG00000167995.11|bestrophin 1
hg19_v2_chr9_-_123676827_123676865	0.0419576	HOXA1	ENST00000546084.1|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chr11_-_2162162_2162246	0.0415368	HOXA1	ENST00000381389.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr19_-_33360647_33360691	0.041249	HOXA1	ENST00000590341.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000587772.1|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9 	ENST00000023064.4|SLC7A9|ENSG00000021488.8|solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
hg19_v2_chr1_-_207095212_207095278	0.0410677	HOXA1	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr11_+_46193466_46193498	0.0407745	HOXA1	ENST00000533793.1|RP11-702F3.3|ENSG00000255314.1|RP11-702F3.3
hg19_v2_chr12_-_101604185_101604185	0.0401729	HOXA1	ENST00000536262.2|SLC5A8|ENSG00000256870.2|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
hg19_v2_chr17_-_38821373_38821440	0.0394203	HOXA1	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr13_-_20735178_20735231	0.0393945	HOXA1	ENST00000241125.3|GJA3|ENSG00000121743.3|gap junction protein, alpha 3, 46kDa
hg19_v2_chr20_+_44036900_44036984	0.0392756	HOXA1	ENST00000443296.1|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr1_+_46152886_46153034	0.0392138	HOXA1	ENST00000372025.4|TMEM69|ENSG00000159596.6|transmembrane protein 69
hg19_v2_chr6_-_142409936_142409936	0.0390721	HOXA1	ENST00000258042.1|NMBR|ENSG00000135577.4|neuromedin B receptor
hg19_v2_chr12_-_86650045_86650076	0.0390372	HOXA1	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr12_+_8276495_8276523	0.0388963	HOXA1	ENST00000546339.1|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr11_+_68228186_68228281	0.0388212	HOXA1	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr12_+_57998400_57998422	0.0383364	HOXA1	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr3_-_161090660_161090673	0.0382445	HOXA1	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chr10_+_7745232_7745295	0.0378666	HOXA1	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr11_+_66247478_66247503	0.0378012	HOXA1	ENST00000531863.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3 	ENST00000532677.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3
hg19_v2_chr9_-_97402531_97402550	0.0375064	HOXA1	ENST00000415431.1|FBP1|ENSG00000165140.5|fructose-1,6-bisphosphatase 1
hg19_v2_chr10_+_62538248_62538260	0.0371055	HOXA1	ENST00000448257.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr12_+_125478241_125478260	0.0363247	HOXA1	ENST00000341446.8|BRI3BP|ENSG00000184992.10|BRI3 binding protein
hg19_v2_chr6_-_44233361_44233500	0.0359826	HOXA1	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr14_-_81408031_81408057	0.0351554	HOXA1	ENST00000216517.6|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr17_-_73401567_73401725	0.03479	HOXA1	ENST00000392562.1|GRB2|ENSG00000177885.9|growth factor receptor-bound protein 2
hg19_v2_chr18_-_3874271_3874337	0.0344427	HOXA1	ENST00000400149.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400155.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400150.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr10_-_126849068_126849138	0.0331883	HOXA1	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr3_+_48264816_48264862	0.0330907	HOXA1	ENST00000296435.2|CAMP|ENSG00000164047.3|cathelicidin antimicrobial peptide 	ENST00000576243.1|CAMP|ENSG00000164047.3|cathelicidin antimicrobial peptide
hg19_v2_chr11_+_2482661_2482675	0.0325362	HOXA1	ENST00000335475.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr6_-_149867122_149867201	0.0324679	HOXA1	ENST00000253329.2|PPIL4|ENSG00000131013.3|peptidylprolyl isomerase (cyclophilin)-like 4
hg19_v2_chr19_+_54641444_54641504	0.0321397	HOXA1	ENST00000221232.5|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3 	ENST00000358389.3|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3
hg19_v2_chr16_-_52119019_52119021	0.0316584	HOXA1	ENST00000561513.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919 	ENST00000565742.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919
hg19_v2_chr9_-_97402413_97402424	0.0316291	HOXA1	ENST00000414122.1|FBP1|ENSG00000165140.5|fructose-1,6-bisphosphatase 1
hg19_v2_chr9_+_116037922_116037975	0.0312678	HOXA1	ENST00000374198.4|PRPF4|ENSG00000136875.8|pre-mRNA processing factor 4
hg19_v2_chr22_+_39101728_39101763	0.0311537	HOXA1	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr1_+_240255166_240255197	0.0310582	HOXA1	ENST00000319653.9|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr1_-_217804377_217804446	0.0310414	HOXA1	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr17_+_43239191_43239212	0.0307379	HOXA1	ENST00000589230.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr8_-_101734907_101735037	0.0303258	HOXA1	ENST00000318607.5|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521865.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000520804.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522720.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521067.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr3_+_111260856_111260948	0.0299738	HOXA1	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr4_-_38806404_38806537	0.0297582	HOXA1	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr12_+_10658489_10658489	0.0296934	HOXA1	ENST00000538173.1|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr17_+_79495397_79495558	0.029669	HOXA1	ENST00000417245.2|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 	ENST00000334850.7|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
hg19_v2_chr17_-_3499125_3499125	0.0295257	HOXA1	ENST00000399759.3|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr12_-_121342170_121342183	0.0291232	HOXA1	ENST00000353487.2|SPPL3|ENSG00000157837.11|signal peptide peptidase like 3
hg19_v2_chr3_-_129612394_129612579	0.0290544	HOXA1	ENST00000505616.1|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1 	ENST00000426664.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr14_-_81408063_81408088	0.0288196	HOXA1	ENST00000557411.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr16_+_66914264_66914516	0.0280846	HOXA1	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr11_-_5248294_5248308	0.0279013	HOXA1	ENST00000335295.4|HBB|ENSG00000244734.2|hemoglobin, beta
hg19_v2_chr12_+_58148842_58148929	0.0278917	HOXA1	ENST00000266643.5|MARCH9|ENSG00000139266.5|membrane-associated ring finger (C3HC4) 9
hg19_v2_chr22_-_22307199_22307242	0.0277137	HOXA1	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr6_+_50061315_50061424	0.0271295	HOXA1	ENST00000415106.1|RP11-397G17.1|ENSG00000226733.1|RP11-397G17.1
hg19_v2_chr17_-_44896047_44896126	0.0271252	HOXA1	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr10_-_103599591_103599635	0.0270852	HOXA1	ENST00000348850.5|KCNIP2|ENSG00000120049.14|Kv channel interacting protein 2
hg19_v2_chr10_-_101380121_101380235	0.0266645	HOXA1	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr3_+_111260954_111260977	0.0265111	HOXA1	ENST00000283285.5|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr15_-_62937380_62937490	0.0264262	HOXA1	ENST00000560347.1|RP11-625H11.1|ENSG00000259458.1|Uncharacterized protein  	ENST00000558940.1|RP11-625H11.1|ENSG00000259458.1|Uncharacterized protein
hg19_v2_chr3_+_130150307_130150307	0.025815	HOXA1	ENST00000512836.1|COL6A5|ENSG00000172752.10|collagen, type VI, alpha 5
hg19_v2_chr3_-_150264272_150264428	0.0256979	HOXA1	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr6_-_47009996_47010035	0.0256149	HOXA1	ENST00000371243.2|GPR110|ENSG00000153292.11|G protein-coupled receptor 110
hg19_v2_chr3_+_44916098_44916104	0.0256126	HOXA1	ENST00000296125.4|TGM4|ENSG00000163810.7|transglutaminase 4
hg19_v2_chr18_-_3874247_3874262	0.0255449	HOXA1	ENST00000581699.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr1_-_40098672_40098672	0.0249316	HOXA1	ENST00000535435.1|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr19_+_1026298_1026336	0.0247257	HOXA1	ENST00000263097.4|CNN2|ENSG00000064666.10|calponin 2
hg19_v2_chr3_+_4535025_4535040	0.0245826	HOXA1	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr12_-_10962767_10962767	0.0243793	HOXA1	ENST00000240691.2|TAS2R9|ENSG00000121381.2|taste receptor, type 2, member 9
hg19_v2_chr11_+_60739249_60739338	0.0241942	HOXA1	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr4_+_71200681_71200690	0.023861	HOXA1	ENST00000273936.5|CABS1|ENSG00000145309.5|calcium-binding protein, spermatid-specific 1
hg19_v2_chr2_+_233897382_233897382	0.023752	HOXA1	ENST00000233840.3|NEU2|ENSG00000115488.3|sialidase 2 (cytosolic sialidase)
hg19_v2_chr11_-_88796803_88796827	0.0237139	HOXA1	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr9_+_132962843_132962872	0.0230169	HOXA1	ENST00000458469.1|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr11_+_105480740_105480756	0.0229077	HOXA1	ENST00000393125.2|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4
hg19_v2_chr12_-_10978957_10978957	0.0228848	HOXA1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr19_-_16008880_16008930	0.0228041	HOXA1	ENST00000011989.7|CYP4F2|ENSG00000186115.8|cytochrome P450, family 4, subfamily F, polypeptide 2 	ENST00000221700.6|CYP4F2|ENSG00000186115.8|cytochrome P450, family 4, subfamily F, polypeptide 2
hg19_v2_chr1_-_7913089_7913096	0.0226524	HOXA1	ENST00000361696.5|UTS2|ENSG00000049247.9|urotensin 2
hg19_v2_chr3_-_49967292_49967327	0.0225526	HOXA1	ENST00000455683.2|MON1A|ENSG00000164077.9|MON1 secretory trafficking family member A
hg19_v2_chrM_+_4431_4475	0.0224815	HOXA1	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr17_+_68071389_68071426	0.0221701	HOXA1	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr6_+_140175987_140176056	0.0219863	HOXA1	ENST00000414038.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1	ENST00000431609.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1
hg19_v2_chr1_-_53018654_53018777	0.0211946	HOXA1	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr10_+_99349450_99349458	0.0209274	HOXA1	ENST00000370640.3|C10orf62|ENSG00000203942.3|chromosome 10 open reading frame 62
hg19_v2_chr11_+_118754475_118754552	0.0208905	HOXA1	ENST00000292174.4|CXCR5|ENSG00000160683.4|chemokine (C-X-C motif) receptor 5
hg19_v2_chr3_-_149093499_149093499	0.0206414	HOXA1	ENST00000472441.1|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr2_-_225434538_225434545	0.0205598	HOXA1	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr9_-_112970436_112970469	0.0202519	HOXA1	ENST00000400613.4|C9orf152|ENSG00000188959.9|chromosome 9 open reading frame 152
hg19_v2_chr12_-_110906027_110906089	0.0200195	HOXA1	ENST00000537466.2|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000550974.1|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000228827.3|GPN3|ENSG00000111231.4|GPN-loop GTPase 3
hg19_v2_chr11_+_3666335_3666361	0.0197638	HOXA1	ENST00000250693.1|ART1|ENSG00000129744.2|ADP-ribosyltransferase 1
hg19_v2_chr19_-_15544099_15544156	0.0196136	HOXA1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr14_-_23504432_23504448	0.0193699	HOXA1	ENST00000425762.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr1_-_203198790_203198807	0.0190178	HOXA1	ENST00000367229.1|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase) 	ENST00000255427.3|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase) 	ENST00000535569.1|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase)
hg19_v2_chr11_+_5509915_5509915	0.0188243	HOXA1	ENST00000322641.5|OR52D1|ENSG00000181609.5|olfactory receptor, family 52, subfamily D, member 1
hg19_v2_chr17_-_39041479_39041501	0.0183869	HOXA1	ENST00000167588.3|KRT20|ENSG00000171431.3|keratin 20
hg19_v2_chr20_+_30467600_30467641	0.0181145	HOXA1	ENST00000375934.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000375922.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9
hg19_v2_chr9_+_10613163_10613202	0.017625	HOXA1	ENST00000429581.2|RP11-87N24.2|ENSG00000226717.2|RP11-87N24.2
hg19_v2_chr11_-_116643688_116643719	0.0175817	HOXA1	ENST00000375445.3|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae) 	ENST00000260210.4|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae)
hg19_v2_chr13_-_36050819_36050834	0.0175687	HOXA1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr9_-_101471479_101471522	0.0174984	HOXA1	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr8_-_66546439_66546451	0.0174156	HOXA1	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr15_-_74501310_74501344	0.0173638	HOXA1	ENST00000423167.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6 	ENST00000432245.2|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr14_-_23504337_23504369	0.0173484	HOXA1	ENST00000361611.6|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr17_-_42988004_42988033	0.0173462	HOXA1	ENST00000586125.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000591880.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein
hg19_v2_chr9_-_128246769_128246780	0.0170148	HOXA1	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr12_+_57610562_57610608	0.0170102	HOXA1	ENST00000349394.5|NXPH4|ENSG00000182379.9|neurexophilin 4
hg19_v2_chr17_-_4269768_4269835	0.0168606	HOXA1	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr15_+_67418047_67418093	0.016167	HOXA1	ENST00000540846.2|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr11_-_72070206_72070250	0.0160728	HOXA1	ENST00000544382.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr1_-_157014865_157014865	0.0157583	HOXA1	ENST00000361409.2|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr11_-_46142948_46143043	0.0155213	HOXA1	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr13_-_46425865_46425902	0.0150059	HOXA1	ENST00000400405.2|SIAH3|ENSG00000215475.3|siah E3 ubiquitin protein ligase family member 3
hg19_v2_chrX_-_25034065_25034088	0.0149635	HOXA1	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr5_-_693500_693511	0.0145555	HOXA1	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr12_-_55378452_55378458	0.0144285	HOXA1	ENST00000449076.1|TESPA1|ENSG00000135426.10|thymocyte expressed, positive selection associated 1
hg19_v2_chr2_+_166326157_166326216	0.0133764	HOXA1	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr16_+_610407_610429	0.0127757	HOXA1	ENST00000409413.3|C16orf11|ENSG00000161992.5|chromosome 16 open reading frame 11
hg19_v2_chr1_-_111061797_111061797	0.0127108	HOXA1	ENST00000369771.2|KCNA10|ENSG00000143105.5|potassium voltage-gated channel, shaker-related subfamily, member 10
hg19_v2_chr1_-_39347255_39347303	0.0126858	HOXA1	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr19_-_50266580_50266587	0.0121524	HOXA1	ENST00000246801.3|TSKS|ENSG00000126467.6|testis-specific serine kinase substrate
hg19_v2_chr12_-_11139511_11139511	0.0118567	HOXA1	ENST00000506868.1|TAS2R50|ENSG00000212126.3|taste receptor, type 2, member 50
hg19_v2_chr6_+_7108210_7108264	0.0118097	HOXA1	ENST00000467782.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000334984.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000349384.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chrX_+_134654540_134654591	0.0117244	HOXA1	ENST00000370752.4|DDX26B|ENSG00000165359.10|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
hg19_v2_chr11_+_36317830_36317850	0.0115809	HOXA1	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr3_+_127872265_127872344	0.0115013	HOXA1	ENST00000254730.6|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific 	ENST00000483457.1|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific
hg19_v2_chr6_-_31560729_31560768	0.0113056	HOXA1	ENST00000340027.5|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376073.4|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376072.3|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3
hg19_v2_chr12_+_54402790_54402832	0.0113041	HOXA1	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr15_-_95870310_95870344	0.0109421	HOXA1	ENST00000508732.2|CTD-2536I1.1|ENSG00000248441.2|CTD-2536I1.1
hg19_v2_chr14_+_96949319_96949444	0.0109396	HOXA1	ENST00000554706.1|AK7|ENSG00000140057.4|adenylate kinase 7
hg19_v2_chr4_+_93225550_93225641	0.0109055	HOXA1	ENST00000282020.4|GRID2|ENSG00000152208.7|glutamate receptor, ionotropic, delta 2
hg19_v2_chr2_-_170681324_170681372	0.0104194	HOXA1	ENST00000409340.1|METTL5|ENSG00000138382.9|methyltransferase like 5
hg19_v2_chr8_+_68864330_68864361	0.0101949	HOXA1	ENST00000288368.4|PREX2|ENSG00000046889.14|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
hg19_v2_chr4_-_145061788_145061904	0.0101087	HOXA1	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr11_+_63706444_63706486	0.0100029	HOXA1	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr6_-_41122063_41122094	0.00995091	HOXA1	ENST00000426005.2|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1 	ENST00000437044.2|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1 	ENST00000373127.4|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1
hg19_v2_chr8_+_143530791_143530825	0.00974324	HOXA1	ENST00000517894.1|BAI1|ENSG00000181790.6|brain-specific angiogenesis inhibitor 1
hg19_v2_chr19_+_51630287_51630287	0.00966187	HOXA1	ENST00000599948.1|SIGLEC9|ENSG00000129450.4|sialic acid binding Ig-like lectin 9
hg19_v2_chr6_+_42123141_42123279	0.0096239	HOXA1	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr11_+_63870660_63870660	0.00956993	HOXA1	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr6_-_52705641_52705641	0.00941812	HOXA1	ENST00000370989.2|GSTA5|ENSG00000182793.6|glutathione S-transferase alpha 5
hg19_v2_chr17_-_57229155_57229198	0.00934355	HOXA1	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr2_+_238600933_238600985	0.00927522	HOXA1	ENST00000420665.1|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1 	ENST00000392000.4|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr4_+_79567314_79567348	0.00918562	HOXA1	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr3_+_150264458_150264481	0.00918433	HOXA1	ENST00000487799.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000460851.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr4_+_154178520_154178562	0.00902348	HOXA1	ENST00000433687.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr7_+_77469439_77469497	0.00862849	HOXA1	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr3_+_150264555_150264592	0.00857018	HOXA1	ENST00000406576.3|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000482093.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000273435.5|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr22_+_44577237_44577278	0.00841719	HOXA1	ENST00000415224.1|PARVG|ENSG00000138964.12|parvin, gamma 	ENST00000417767.1|PARVG|ENSG00000138964.12|parvin, gamma
hg19_v2_chr8_+_104152922_104152992	0.00782753	HOXA1	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr12_-_96794143_96794264	0.00778038	HOXA1	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr17_+_43239231_43239297	0.00777325	HOXA1	ENST00000591576.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000591070.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000592695.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr11_+_105480793_105480848	0.00741814	HOXA1	ENST00000282499.5|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000393127.2|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000527669.1|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4
hg19_v2_chr13_+_30002741_30002776	0.00719589	HOXA1	ENST00000380808.2|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chr15_-_34635314_34635378	0.00711374	HOXA1	ENST00000557912.1|NOP10|ENSG00000182117.4|NOP10 ribonucleoprotein 	ENST00000328848.4|NOP10|ENSG00000182117.4|NOP10 ribonucleoprotein
hg19_v2_chrX_+_115301975_115302005	0.00678154	HOXA1	ENST00000371906.4|AGTR2|ENSG00000180772.6|angiotensin II receptor, type 2
hg19_v2_chr16_+_9056563_9056590	0.00674379	HOXA1	ENST00000564485.1|RP11-77H9.8|ENSG00000260979.1|RP11-77H9.8
hg19_v2_chr12_-_49449107_49449107	0.00669815	HOXA1	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr3_+_4535155_4535234	0.00632432	HOXA1	ENST00000544951.1|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr22_+_29834572_29834572	0.00594752	HOXA1	ENST00000354373.2|RFPL1|ENSG00000128250.5|ret finger protein-like 1
hg19_v2_chr16_+_28986134_28986147	0.0059099	HOXA1	ENST00000352260.7|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr8_+_40010989_40011008	0.00590086	HOXA1	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr17_+_7758374_7758390	0.00560648	HOXA1	ENST00000301599.6|TMEM88|ENSG00000167874.6|transmembrane protein 88 	ENST00000574668.1|TMEM88|ENSG00000167874.6|transmembrane protein 88
hg19_v2_chrX_-_10645773_10645795	0.00531393	HOXA1	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr15_-_74501360_74501380	0.00509833	HOXA1	ENST00000323940.5|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr12_-_21927736_21927768	0.00479059	HOXA1	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr12_-_76817036_76817070	0.0046644	HOXA1	ENST00000546946.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr6_+_25754927_25754980	0.00463322	HOXA1	ENST00000377905.4|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4 	ENST00000439485.2|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4
hg19_v2_chr7_+_45067265_45067276	0.00420404	HOXA1	ENST00000474617.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr3_+_179322573_179322614	0.00415779	HOXA1	ENST00000493866.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000472629.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000482604.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr9_+_2717502_2717524	0.00409266	HOXA1	ENST00000382082.3|KCNV2|ENSG00000168263.8|potassium channel, subfamily V, member 2
hg19_v2_chr22_-_19419205_19419280	0.00380926	HOXA1	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr17_-_26989136_26989218	0.00347184	HOXA1	ENST00000247020.4|SDF2|ENSG00000132581.5|stromal cell-derived factor 2
hg19_v2_chr8_+_22132847_22132876	0.00345065	HOXA1	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr7_-_126892303_126892435	0.00320416	HOXA1	ENST00000358373.3|GRM8|ENSG00000179603.13|glutamate receptor, metabotropic 8
hg19_v2_chr19_-_45735138_45735138	0.00318381	HOXA1	ENST00000252482.3|EXOC3L2|ENSG00000130201.3|exocyst complex component 3-like 2
hg19_v2_chr11_-_2193025_2193107	0.00315381	HOXA1	ENST00000333684.5|TH|ENSG00000180176.10|tyrosine hydroxylase 	ENST00000381178.1|TH|ENSG00000180176.10|tyrosine hydroxylase 	ENST00000381175.1|TH|ENSG00000180176.10|tyrosine hydroxylase 	ENST00000352909.3|TH|ENSG00000180176.10|tyrosine hydroxylase
hg19_v2_chr10_-_29923893_29923907	0.00309587	HOXA1	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr6_+_32006042_32006084	0.00299547	HOXA1	ENST00000418967.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr12_+_21525818_21525862	0.00287149	HOXA1	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr12_+_64173583_64173664	0.00250255	HOXA1	ENST00000261234.6|TMEM5|ENSG00000118600.7|transmembrane protein 5
hg19_v2_chr8_-_114449112_114449328	0.00244811	HOXA1	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr19_-_5680891_5680951	0.00222592	HOXA1	ENST00000309324.4|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr4_+_79567362_79567380	0.00205731	HOXA1	ENST00000512322.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr9_-_116037840_116037876	0.00183169	HOXA1	ENST00000374206.3|CDC26|ENSG00000176386.4|cell division cycle 26
hg19_v2_chr3_-_179322436_179322447	0.00146352	HOXA1	ENST00000392659.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47 	ENST00000476781.1|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr20_+_8112824_8112925	0.00127096	HOXA1	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr7_-_99332719_99332820	0.00125463	HOXA1	ENST00000336374.2|CYP3A7|ENSG00000160870.8|cytochrome P450, family 3, subfamily A, polypeptide 7
hg19_v2_chr1_-_153517473_153517539	0.000363588	HOXA1	ENST00000368715.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr17_+_61571746_61571765	0.000355462	HOXA1	ENST00000579409.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme
hg19_v2_chr20_+_36012051_36012071	0.000302762	HOXA1	ENST00000373567.2|SRC|ENSG00000197122.7|v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
hg19_v2_chr19_-_42192096_42192171	0.000262661	HOXA1	ENST00000602225.1|CEACAM7|ENSG00000007306.10|carcinoembryonic antigen-related cell adhesion molecule 7
hg19_v2_chr12_+_93096619_93096750	0.000175841	HOXA1	ENST00000397833.3|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
