hg19_v2_chr18_+_61554932_61554993	0.617923	HOXD9	ENST00000299502.4|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2 	ENST00000457692.1|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2 	ENST00000413956.1|SERPINB2|ENSG00000197632.4|serpin peptidase inhibitor, clade B (ovalbumin), member 2
hg19_v2_chr18_+_21452804_21452910	0.596255	HOXD9	ENST00000269217.6|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr11_-_104972158_104972190	0.489345	HOXD9	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr10_-_105845674_105845760	0.487515	HOXD9	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chrX_-_33229636_33229651	0.328915	HOXD9	ENST00000357033.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr11_+_69924639_69924664	0.318671	HOXD9	ENST00000538023.1|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel 	ENST00000398543.2|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr5_+_147582348_147582361	0.307941	HOXD9	ENST00000514389.1|SPINK6|ENSG00000178172.2|serine peptidase inhibitor, Kazal type 6
hg19_v2_chr1_+_152956549_152956566	0.300924	HOXD9	ENST00000307122.2|SPRR1A|ENSG00000169474.3|small proline-rich protein 1A
hg19_v2_chr7_+_16793160_16793160	0.266905	HOXD9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chr1_+_81771806_81771876	0.233187	HOXD9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr11_-_104905840_104905977	0.225089	HOXD9	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr6_+_132891461_132891461	0.206857	HOXD9	ENST00000275198.1|TAAR6|ENSG00000146383.7|trace amine associated receptor 6
hg19_v2_chr8_+_104892639_104892652	0.206374	HOXD9	ENST00000436393.2|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr19_+_45843994_45844015	0.177073	HOXD9	ENST00000391946.2|KLC3|ENSG00000104892.12|kinesin light chain 3
hg19_v2_chr4_-_84035868_84035897	0.174436	HOXD9	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr11_+_123986069_123986169	0.165813	HOXD9	ENST00000456829.2|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000361352.5|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000449321.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392748.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000360334.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392744.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A
hg19_v2_chr3_+_145782358_145782358	0.16429	HOXD9	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
hg19_v2_chr5_+_140180635_140180783	0.158641	HOXD9	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr4_-_84035905_84035955	0.157324	HOXD9	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr5_+_140248518_140248689	0.156598	HOXD9	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr4_+_69313145_69313167	0.149995	HOXD9	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr6_+_32812568_32812631	0.147817	HOXD9	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr8_+_86089460_86089483	0.146973	HOXD9	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr4_-_76944621_76944671	0.143016	HOXD9	ENST00000306602.1|CXCL10|ENSG00000169245.4|chemokine (C-X-C motif) ligand 10
hg19_v2_chr10_+_60759378_60759409	0.142685	HOXD9	ENST00000432535.1|LINC00844|ENSG00000237949.1|long intergenic non-protein coding RNA 844
hg19_v2_chr4_-_110723194_110723207	0.142652	HOXD9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr8_+_86089619_86089653	0.141853	HOXD9	ENST00000256117.5|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding 	ENST00000416274.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr5_+_147582387_147582404	0.139276	HOXD9	ENST00000325630.2|SPINK6|ENSG00000178172.2|serine peptidase inhibitor, Kazal type 6
hg19_v2_chr1_+_160370344_160370406	0.138534	HOXD9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr17_-_39646116_39646164	0.133377	HOXD9	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr5_+_140207536_140207650	0.129327	HOXD9	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr7_-_107880508_107880522	0.125473	HOXD9	ENST00000425651.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr12_+_26348246_26348310	0.119628	HOXD9	ENST00000422622.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr3_-_139258521_139258671	0.116628	HOXD9	ENST00000483943.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000232219.2|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular 	ENST00000492918.1|RBP1|ENSG00000114115.5|retinol binding protein 1, cellular
hg19_v2_chr18_-_53069419_53069471	0.116439	HOXD9	ENST00000570177.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_+_16083154_16083168	0.116082	HOXD9	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr8_+_52730143_52730143	0.113184	HOXD9	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr8_-_86253888_86253944	0.113042	HOXD9	ENST00000522389.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000432364.2|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517618.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr6_+_1312675_1312701	0.111224	HOXD9	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr12_-_95510743_95510753	0.109974	HOXD9	ENST00000551521.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr1_-_59043166_59043166	0.109823	HOXD9	ENST00000371225.2|TACSTD2|ENSG00000184292.5|tumor-associated calcium signal transducer 2
hg19_v2_chr6_+_72926145_72926245	0.108056	HOXD9	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr3_-_116163830_116163855	0.10686	HOXD9	ENST00000333617.4|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr14_+_23654525_23654545	0.105109	HOXD9	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr6_+_73076432_73076455	0.103848	HOXD9	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr8_-_66701319_66701330	0.0991444	HOXD9	ENST00000379419.4|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr12_+_19358228_19358259	0.0972823	HOXD9	ENST00000424268.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000543806.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr7_-_111032971_111032986	0.0956327	HOXD9	ENST00000450877.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr11_-_13517565_13517728	0.0954891	HOXD9	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr11_-_16430399_16430440	0.0925209	HOXD9	ENST00000528252.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr5_-_78808617_78808653	0.0923672	HOXD9	ENST00000282260.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila) 	ENST00000508576.1|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila) 	ENST00000535690.1|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr4_+_175839551_175839567	0.09043	HOXD9	ENST00000404450.4|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29 	ENST00000514159.1|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29
hg19_v2_chr12_-_88974236_88974256	0.0900723	HOXD9	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr2_+_54342574_54342641	0.0882188	HOXD9	ENST00000303536.4|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type 	ENST00000394666.3|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type
hg19_v2_chr16_-_20556492_20556492	0.0869589	HOXD9	ENST00000568098.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr11_-_104827425_104827425	0.0837566	HOXD9	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr12_+_119772502_119772522	0.0817994	HOXD9	ENST00000536742.1|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60 	ENST00000327554.2|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60
hg19_v2_chr2_+_185463093_185463181	0.0813596	HOXD9	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr2_+_145780725_145780735	0.0805516	HOXD9	ENST00000451478.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr2_+_145780767_145780811	0.0793984	HOXD9	ENST00000599358.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596278.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596747.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608652.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000609705.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608432.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596970.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602041.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000601578.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596034.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414195.2|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000594837.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr6_+_13272904_13272989	0.0766037	HOXD9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr13_-_44735393_44735393	0.0739523	HOXD9	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr9_+_12693336_12693460	0.0722576	HOXD9	ENST00000381137.2|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1 	ENST00000388918.5|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1
hg19_v2_chr11_-_102401469_102401488	0.070629	HOXD9	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr1_+_45140360_45140399	0.0706107	HOXD9	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr1_+_196857144_196857233	0.0701344	HOXD9	ENST00000367416.2|CFHR4|ENSG00000134365.8|complement factor H-related 4 	ENST00000251424.4|CFHR4|ENSG00000134365.8|complement factor H-related 4 	ENST00000367418.2|CFHR4|ENSG00000134365.8|complement factor H-related 4
hg19_v2_chr2_+_145780739_145780759	0.0674522	HOXD9	ENST00000597173.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602108.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000420472.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr11_-_5255861_5255888	0.0661789	HOXD9	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr6_-_52774464_52774499	0.0656384	HOXD9	ENST00000370968.1|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3 	ENST00000211122.3|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3
hg19_v2_chr6_-_132967142_132967142	0.0626001	HOXD9	ENST00000275216.1|TAAR1|ENSG00000146399.1|trace amine associated receptor 1
hg19_v2_chrX_-_130423200_130423228	0.0624506	HOXD9	ENST00000361420.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr3_+_97887544_97887544	0.0622358	HOXD9	ENST00000356526.2|OR5H15|ENSG00000233412.2|olfactory receptor, family 5, subfamily H, member 15
hg19_v2_chr1_+_101185290_101185320	0.0616615	HOXD9	ENST00000370119.4|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000347652.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000294728.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000370115.1|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1
hg19_v2_chr6_-_32634425_32634479	0.061564	HOXD9	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr17_+_68071389_68071426	0.061377	HOXD9	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr18_+_616672_616681	0.0613314	HOXD9	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr12_-_8765446_8765468	0.0611082	HOXD9	ENST00000537228.1|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase 	ENST00000229335.6|AICDA|ENSG00000111732.6|activation-induced cytidine deaminase
hg19_v2_chr11_-_105010320_105010516	0.0598461	HOXD9	ENST00000532895.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18 	ENST00000530950.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18
hg19_v2_chr19_-_5903714_5903809	0.0584683	HOXD9	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chrX_+_144908928_144908928	0.0574078	HOXD9	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr17_-_10452929_10452946	0.0573048	HOXD9	ENST00000532183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000397183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000420805.1|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult
hg19_v2_chr6_+_18387570_18387588	0.0563336	HOXD9	ENST00000259939.3|RNF144B|ENSG00000137393.8|ring finger protein 144B
hg19_v2_chr3_+_182511266_182511308	0.0551788	HOXD9	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr3_+_94657086_94657107	0.0546691	HOXD9	ENST00000463200.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chr1_+_38022513_38022571	0.053054	HOXD9	ENST00000296218.7|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr10_-_49459800_49459841	0.0521939	HOXD9	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr4_+_25915822_25915893	0.0520571	HOXD9	ENST00000506197.2|SMIM20|ENSG00000250317.4|small integral membrane protein 20
hg19_v2_chr2_+_143635067_143635211	0.0517979	HOXD9	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr17_+_68071458_68071481	0.0517414	HOXD9	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr12_-_10607084_10607284	0.0510136	HOXD9	ENST00000408006.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000544822.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000536188.1|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr4_-_69434245_69434245	0.0508565	HOXD9	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v2_chr3_+_158787041_158787074	0.0507995	HOXD9	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr22_+_30477000_30477000	0.0505273	HOXD9	ENST00000403975.1|HORMAD2|ENSG00000176635.13|HORMA domain containing 2
hg19_v2_chr1_+_87012753_87012767	0.0494919	HOXD9	ENST00000370563.3|CLCA4|ENSG00000016602.8|chloride channel accessory 4
hg19_v2_chr10_-_13523073_13523073	0.0488798	HOXD9	ENST00000440282.1|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr19_+_55014085_55014123	0.0480426	HOXD9	ENST00000351841.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr12_-_110486348_110486370	0.0477571	HOXD9	ENST00000547573.1|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76 	ENST00000546651.2|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76 	ENST00000551185.2|C12orf76|ENSG00000174456.9|chromosome 12 open reading frame 76
hg19_v2_chr3_+_140981456_140981508	0.0473864	HOXD9	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr22_+_50609150_50609199	0.0472928	HOXD9	ENST00000159647.5|PANX2|ENSG00000073150.9|pannexin 2 	ENST00000395842.2|PANX2|ENSG00000073150.9|pannexin 2
hg19_v2_chr11_+_112047087_112047123	0.0467269	HOXD9	ENST00000526088.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000532593.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000531169.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2
hg19_v2_chr7_-_121944491_121944705	0.0465169	HOXD9	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chr8_-_102181718_102181857	0.0464438	HOXD9	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr14_+_39583427_39583542	0.0460439	HOXD9	ENST00000308317.6|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000396249.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000250379.8|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000534684.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000527381.1|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2
hg19_v2_chr19_+_55014013_55014052	0.0452951	HOXD9	ENST00000301202.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr8_+_107738343_107738413	0.0451829	HOXD9	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr3_+_94657118_94657130	0.0447339	HOXD9	ENST00000466089.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879 	ENST00000470465.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chrX_-_72434628_72434722	0.0443672	HOXD9	ENST00000536638.1|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2 	ENST00000373517.3|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2
hg19_v2_chr3_+_158991025_158991083	0.0440623	HOXD9	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr19_+_10397648_10397690	0.0433257	HOXD9	ENST00000340992.4|ICAM4|ENSG00000105371.8|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) 	ENST00000393717.2|ICAM4|ENSG00000105371.8|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)
hg19_v2_chr18_+_616711_616720	0.0423077	HOXD9	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr13_-_47012325_47012366	0.0422515	HOXD9	ENST00000409879.2|KIAA0226L|ENSG00000102445.14|KIAA0226-like
hg19_v2_chr2_-_118943930_118943963	0.0413556	HOXD9	ENST00000449075.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000414886.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000449819.1|AC093901.1|ENSG00000226856.1|AC093901.1
hg19_v2_chr9_-_71629010_71629040	0.0411102	HOXD9	ENST00000377276.2|PRKACG|ENSG00000165059.5|protein kinase, cAMP-dependent, catalytic, gamma
hg19_v2_chr21_+_17792672_17792775	0.0409873	HOXD9	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr1_+_104615595_104615645	0.0409105	HOXD9	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr1_-_39339777_39339777	0.0402401	HOXD9	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr15_-_90222642_90222658	0.0391284	HOXD9	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr4_-_72649763_72649802	0.039044	HOXD9	ENST00000513476.1|GC|ENSG00000145321.8|group-specific component (vitamin D binding protein)
hg19_v2_chr15_+_57998923_57998934	0.0381308	HOXD9	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr15_-_90222610_90222634	0.0379987	HOXD9	ENST00000300055.5|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chrX_-_125686784_125686834	0.0379754	HOXD9	ENST00000371126.1|DCAF12L1|ENSG00000198889.3|DDB1 and CUL4 associated factor 12-like 1
hg19_v2_chrX_-_68385274_68385350	0.0379601	HOXD9	ENST00000374584.3|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase 	ENST00000590146.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr9_-_39239171_39239171	0.0377878	HOXD9	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr3_-_99569821_99569919	0.0371392	HOXD9	ENST00000487087.1|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr7_-_50633078_50633154	0.0365998	HOXD9	ENST00000444124.2|DDC|ENSG00000132437.13|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v2_chr6_-_88411911_88411928	0.0363076	HOXD9	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr15_-_66797172_66797221	0.0362604	HOXD9	ENST00000569438.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000569696.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000307961.6|RPL4|ENSG00000174444.10|ribosomal protein L4
hg19_v2_chr2_+_210517895_210518021	0.0362439	HOXD9	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr2_+_1418154_1418194	0.0356117	HOXD9	ENST00000423320.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000382198.1|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr8_-_10512569_10512612	0.0353269	HOXD9	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr11_+_63606373_63606418	0.0352623	HOXD9	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr17_+_61086917_61086921	0.0352571	HOXD9	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chrX_-_68385354_68385369	0.0352047	HOXD9	ENST00000361478.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr17_+_9479944_9479965	0.0342027	HOXD9	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr2_+_54342533_54342547	0.0332191	HOXD9	ENST00000406041.1|ACYP2|ENSG00000170634.8|acylphosphatase 2, muscle type
hg19_v2_chr12_-_9268707_9268758	0.0331871	HOXD9	ENST00000318602.7|A2M|ENSG00000175899.10|alpha-2-macroglobulin
hg19_v2_chr7_-_16921601_16921614	0.0331659	HOXD9	ENST00000402239.3|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000310398.2|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000414935.1|AGR3|ENSG00000173467.4|anterior gradient 3
hg19_v2_chr2_+_135809835_135809874	0.0326134	HOXD9	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr16_+_4545853_4545864	0.0326112	HOXD9	ENST00000575129.1|HMOX2|ENSG00000103415.7|heme oxygenase (decycling) 2 	ENST00000398595.3|HMOX2|ENSG00000103415.7|heme oxygenase (decycling) 2 	ENST00000414777.1|HMOX2|ENSG00000103415.7|heme oxygenase (decycling) 2
hg19_v2_chr5_-_39274617_39274636	0.0325056	HOXD9	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr1_+_50459990_50459990	0.0318505	HOXD9	ENST00000448346.1|AL645730.2|ENSG00000227839.1|AL645730.2
hg19_v2_chr14_+_94385235_94385258	0.0314581	HOXD9	ENST00000557719.1|FAM181A|ENSG00000140067.6|family with sequence similarity 181, member A 	ENST00000267594.5|FAM181A|ENSG00000140067.6|family with sequence similarity 181, member A
hg19_v2_chr1_+_219347203_219347233	0.0309055	HOXD9	ENST00000366927.3|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr2_+_33661382_33661445	0.0308132	HOXD9	ENST00000402538.3|RASGRP3|ENSG00000152689.13|RAS guanyl releasing protein 3 (calcium and DAG-regulated)
hg19_v2_chr4_+_74606223_74606293	0.0304481	HOXD9	ENST00000307407.3|IL8|ENSG00000169429.6|interleukin 8 	ENST00000401931.1|IL8|ENSG00000169429.6|interleukin 8
hg19_v2_chr12_-_11463353_11463372	0.0301869	HOXD9	ENST00000279575.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000535904.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000445719.2|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4
hg19_v2_chr8_-_20040601_20040630	0.0298285	HOXD9	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr2_+_145425573_145425654	0.0297662	HOXD9	ENST00000600064.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597670.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414256.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599187.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000451774.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599072.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596589.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597893.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr9_+_70856397_70856397	0.0295763	HOXD9	ENST00000360171.6|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr19_+_55385682_55385717	0.0293251	HOXD9	ENST00000391726.3|FCAR|ENSG00000186431.14|Fc fragment of IgA, receptor for
hg19_v2_chr10_-_71169031_71169044	0.0291294	HOXD9	ENST00000373307.1|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr1_+_109255279_109255279	0.0290133	HOXD9	ENST00000370017.3|FNDC7|ENSG00000143107.4|fibronectin type III domain containing 7
hg19_v2_chr22_+_19118321_19118321	0.0283186	HOXD9	ENST00000399635.2|TSSK2|ENSG00000206203.3|testis-specific serine kinase 2
hg19_v2_chr6_+_46761118_46761132	0.0281615	HOXD9	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr4_+_186990298_186990342	0.027659	HOXD9	ENST00000296795.3|TLR3|ENSG00000164342.8|toll-like receptor 3 	ENST00000513189.1|TLR3|ENSG00000164342.8|toll-like receptor 3
hg19_v2_chr8_-_20040638_20040717	0.0269068	HOXD9	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr1_+_67632083_67632169	0.0264082	HOXD9	ENST00000347310.5|IL23R|ENSG00000162594.10|interleukin 23 receptor 	ENST00000371002.1|IL23R|ENSG00000162594.10|interleukin 23 receptor
hg19_v2_chr2_-_228244013_228244027	0.0255811	HOXD9	ENST00000304568.3|TM4SF20|ENSG00000168955.3|transmembrane 4 L six family member 20
hg19_v2_chrX_-_130423386_130423403	0.025293	HOXD9	ENST00000370903.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr2_-_179567206_179567260	0.0252672	HOXD9	ENST00000414766.1|TTN|ENSG00000155657.19|titin
hg19_v2_chr1_+_197237352_197237543	0.025263	HOXD9	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chrX_-_77150911_77150960	0.0252596	HOXD9	ENST00000373336.3|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr5_+_29143603_29143622	0.0250273	HOXD9	ENST00000602470.1|CTD-2118P12.1|ENSG00000259786.2|CTD-2118P12.1	ENST00000602801.1|CTD-2118P12.1|ENSG00000259786.2|CTD-2118P12.1
hg19_v2_chr2_-_231989808_231989832	0.024997	HOXD9	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr13_-_81801115_81801122	0.0249473	HOXD9	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr4_-_69817481_69817528	0.0246864	HOXD9	ENST00000251566.4|UGT2A3|ENSG00000135220.6|UDP glucuronosyltransferase 2 family, polypeptide A3
hg19_v2_chr12_-_118628350_118628371	0.0243777	HOXD9	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr17_-_47723943_47723992	0.024058	HOXD9	ENST00000510476.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000503676.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr17_-_53809473_53809482	0.0235933	HOXD9	ENST00000575734.1|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr7_+_93535866_93535906	0.0232165	HOXD9	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr10_-_28623368_28623415	0.0231099	HOXD9	ENST00000441595.2|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr1_+_197881592_197881635	0.0229531	HOXD9	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr4_-_68749699_68749725	0.0226492	HOXD9	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr7_-_6866401_6866401	0.0226186	HOXD9	ENST00000316731.8|CCZ1B|ENSG00000146574.11|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
hg19_v2_chr15_+_52155001_52155035	0.0224117	HOXD9	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chrX_-_109590174_109590203	0.0224036	HOXD9	ENST00000372054.1|GNG5P2|ENSG00000133136.3|guanine nucleotide binding protein (G protein), gamma 5 pseudogene 2
hg19_v2_chr7_-_5998714_5998714	0.022177	HOXD9	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr13_+_46039037_46039126	0.0220671	HOXD9	ENST00000349995.5|COG3|ENSG00000136152.10|component of oligomeric golgi complex 3
hg19_v2_chr6_+_123317116_123317260	0.0218305	HOXD9	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr3_+_107318157_107318172	0.0213221	HOXD9	ENST00000406780.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr4_+_88529681_88529681	0.0210068	HOXD9	ENST00000399271.1|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr11_+_89867803_89867906	0.0209011	HOXD9	ENST00000321955.4|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000525171.1|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2 	ENST00000375944.3|NAALAD2|ENSG00000077616.6|N-acetylated alpha-linked acidic dipeptidase 2
hg19_v2_chr2_+_143635222_143635240	0.0208768	HOXD9	ENST00000375773.2|KYNU|ENSG00000115919.10|kynureninase 	ENST00000409512.1|KYNU|ENSG00000115919.10|kynureninase 	ENST00000410015.2|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr3_+_195413160_195413288	0.0205362	HOXD9	ENST00000599448.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969
hg19_v2_chr1_-_213020991_213020991	0.0202831	HOXD9	ENST00000332912.3|C1orf227|ENSG00000185523.6|chromosome 1 open reading frame 227
hg19_v2_chr12_+_9144626_9144666	0.020089	HOXD9	ENST00000543895.1|KLRG1|ENSG00000139187.5|killer cell lectin-like receptor subfamily G, member 1
hg19_v2_chr15_+_58430567_58430589	0.0200004	HOXD9	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr3_-_139396801_139396847	0.0197011	HOXD9	ENST00000413939.2|NMNAT3|ENSG00000163864.10|nicotinamide nucleotide adenylyltransferase 3 	ENST00000339837.5|NMNAT3|ENSG00000163864.10|nicotinamide nucleotide adenylyltransferase 3 	ENST00000512391.1|NMNAT3|ENSG00000163864.10|nicotinamide nucleotide adenylyltransferase 3
hg19_v2_chr2_+_234668894_234668934	0.0194567	HOXD9	ENST00000305208.5|UGT1A8|ENSG00000242366.2|UDP glucuronosyltransferase 1 family, polypeptide A1 	ENST00000608383.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000360418.3|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
hg19_v2_chr13_-_33924755_33924822	0.0189191	HOXD9	ENST00000439831.1|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13 	ENST00000567873.1|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr16_+_67927147_67927180	0.0188981	HOXD9	ENST00000291041.5|PSKH1|ENSG00000159792.5|protein serine kinase H1
hg19_v2_chr15_+_58430368_58430401	0.0188192	HOXD9	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr18_-_22932080_22932170	0.0185166	HOXD9	ENST00000584787.1|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000361524.3|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000538137.2|ZNF521|ENSG00000198795.6|zinc finger protein 521
hg19_v2_chr4_-_144940477_144940541	0.018248	HOXD9	ENST00000513128.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000429670.2|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000502664.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group)
hg19_v2_chr7_+_93535817_93535822	0.0181399	HOXD9	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr4_-_146859787_146859921	0.0178161	HOXD9	ENST00000508784.1|ZNF827|ENSG00000151612.11|zinc finger protein 827
hg19_v2_chr7_+_117864708_117864798	0.0175861	HOXD9	ENST00000357099.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000265224.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000486422.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000417525.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7
hg19_v2_chr3_-_139396853_139396879	0.0174006	HOXD9	ENST00000406164.1|NMNAT3|ENSG00000163864.10|nicotinamide nucleotide adenylyltransferase 3 	ENST00000406824.1|NMNAT3|ENSG00000163864.10|nicotinamide nucleotide adenylyltransferase 3
hg19_v2_chr3_+_186435065_186435126	0.0173134	HOXD9	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr2_-_170430277_170430361	0.0169152	HOXD9	ENST00000438035.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000453929.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr4_-_168155700_168155722	0.0165833	HOXD9	ENST00000357545.4|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512648.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr1_-_100643765_100643829	0.0164637	HOXD9	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr20_-_13971255_13971264	0.0160599	HOXD9	ENST00000284951.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans) 	ENST00000378072.5|SEL1L2|ENSG00000101251.7|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg19_v2_chr12_-_15104040_15104114	0.0160292	HOXD9	ENST00000541644.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta 	ENST00000545895.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr9_+_124103625_124103625	0.0159538	HOXD9	ENST00000594963.1|AL161784.1|ENSG00000267987.1|Uncharacterized protein
hg19_v2_chr3_+_155838337_155838382	0.0154342	HOXD9	ENST00000490337.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENST00000389636.5|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr4_-_70361579_70361600	0.0149243	HOXD9	ENST00000512583.1|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr1_+_202385953_202385994	0.0147695	HOXD9	ENST00000466968.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr11_+_49050504_49050504	0.0146942	HOXD9	ENST00000332682.7|TRIM49B|ENSG00000182053.8|tripartite motif containing 49B
hg19_v2_chr10_+_115511213_115511272	0.0143309	HOXD9	ENST00000361048.1|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr3_+_107602030_107602095	0.0141543	HOXD9	ENST00000494231.1|LINC00636|ENSG00000240423.1|long intergenic non-protein coding RNA 636
hg19_v2_chr1_+_44870866_44870960	0.013991	HOXD9	ENST00000355387.2|RNF220|ENSG00000187147.13|ring finger protein 220 	ENST00000361799.2|RNF220|ENSG00000187147.13|ring finger protein 220
hg19_v2_chr9_-_21228221_21228221	0.013912	HOXD9	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr2_-_228497888_228498036	0.0138591	HOXD9	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chr3_-_38835501_38835501	0.0137936	HOXD9	ENST00000449082.2|SCN10A|ENSG00000185313.6|sodium channel, voltage-gated, type X, alpha subunit
hg19_v2_chrX_-_130423240_130423288	0.0137919	HOXD9	ENST00000370910.1|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1 	ENST00000370901.4|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr3_+_178276488_178276655	0.0135902	HOXD9	ENST00000432997.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000455865.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr1_+_15668240_15668263	0.0130864	HOXD9	ENST00000444385.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr4_-_68749745_68749756	0.0130337	HOXD9	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr12_-_10007448_10007448	0.0129707	HOXD9	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr12_-_7656357_7656489	0.0128967	HOXD9	ENST00000396620.3|CD163|ENSG00000177575.8|CD163 molecule 	ENST00000432237.2|CD163|ENSG00000177575.8|CD163 molecule 	ENST00000359156.4|CD163|ENSG00000177575.8|CD163 molecule
hg19_v2_chr6_+_130339710_130339745	0.0124879	HOXD9	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr3_+_62936098_62936146	0.0124718	HOXD9	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr6_-_133055815_133055834	0.012152	HOXD9	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr4_-_70361615_70361631	0.0119231	HOXD9	ENST00000305107.6|UGT2B4|ENSG00000156096.8|UDP glucuronosyltransferase 2 family, polypeptide B4
hg19_v2_chr2_-_170430366_170430390	0.0118116	HOXD9	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr6_-_39399087_39399150	0.0112899	HOXD9	ENST00000229913.5|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000541946.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000394362.1|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr1_-_244006528_244006588	0.0109911	HOXD9	ENST00000336199.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3 	ENST00000263826.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr4_+_71263599_71263668	0.0109496	HOXD9	ENST00000399575.2|PROL1|ENSG00000171199.5|proline rich, lacrimal 1
hg19_v2_chr2_+_234627424_234627444	0.0109378	HOXD9	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr4_-_120225600_120225600	0.0106946	HOXD9	ENST00000399075.4|C4orf3|ENSG00000164096.10|chromosome 4 open reading frame 3
hg19_v2_chr2_-_128284020_128284091	0.0105477	HOXD9	ENST00000295321.4|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae) 	ENST00000455721.2|IWS1|ENSG00000163166.9|IWS1 homolog (S. cerevisiae)
hg19_v2_chr22_+_22749343_22749360	0.0105395	HOXD9	ENST00000390298.2|IGLV7-43|ENSG00000211652.2|immunoglobulin lambda variable 7-43
hg19_v2_chr6_+_131894284_131894378	0.0104503	HOXD9	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr17_+_7155819_7155942	0.0102434	HOXD9	ENST00000570322.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000576496.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000574841.2|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5
hg19_v2_chr1_-_111061797_111061797	0.0101969	HOXD9	ENST00000369771.2|KCNA10|ENSG00000143105.5|potassium voltage-gated channel, shaker-related subfamily, member 10
hg19_v2_chr15_-_49913126_49913158	0.00871481	HOXD9	ENST00000561064.1|FAM227B|ENSG00000166262.11|family with sequence similarity 227, member B 	ENST00000299338.6|FAM227B|ENSG00000166262.11|family with sequence similarity 227, member B
hg19_v2_chr21_-_31588365_31588398	0.00858111	HOXD9	ENST00000399899.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr3_-_157221128_157221216	0.00827531	HOXD9	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr6_+_63921351_63921386	0.00731279	HOXD9	ENST00000370659.1|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr2_-_89278535_89278600	0.00655983	HOXD9	ENST00000390247.2|IGKV3-7|ENSG00000243063.1|immunoglobulin kappa variable 3-7 (non-functional)
hg19_v2_chr5_-_138775177_138775220	0.00616418	HOXD9	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr12_+_9980069_9980087	0.00582175	HOXD9	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr18_-_57027194_57027194	0.00536204	HOXD9	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr6_-_31632962_31632997	0.00534747	HOXD9	ENST00000456540.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1 	ENST00000445768.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1
hg19_v2_chr3_+_108855558_108855733	0.00482091	HOXD9	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr15_-_99789736_99789820	0.00459806	HOXD9	ENST00000560235.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394132.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560860.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558078.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394136.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000262074.4|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558613.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394130.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560772.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr2_+_161993465_161993481	0.00442807	HOXD9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr5_-_177207634_177207677	0.00383077	HOXD9	ENST00000513554.1|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A 	ENST00000440605.3|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A
hg19_v2_chr19_+_15838834_15838834	0.0034694	HOXD9	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr4_-_168155577_168155661	0.00226657	HOXD9	ENST00000541354.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000509854.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512681.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000421836.2|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510741.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510403.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr3_+_2933893_2933921	0.00194018	HOXD9	ENST00000397459.2|CNTN4|ENSG00000144619.10|contactin 4
hg19_v2_chr15_-_45493289_45493373	0.00186202	HOXD9	ENST00000561278.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F 	ENST00000290894.8|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr20_-_35890211_35890238	0.00185683	HOXD9	ENST00000373614.2|GHRH|ENSG00000118702.5|growth hormone releasing hormone
hg19_v2_chr10_+_5406935_5406972	0.00182352	HOXD9	ENST00000380433.3|UCN3|ENSG00000178473.5|urocortin 3
hg19_v2_chr12_-_95009837_95009854	0.00164084	HOXD9	ENST00000551457.1|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr2_+_128458514_128458597	0.00158181	HOXD9	ENST00000310981.4|SFT2D3|ENSG00000173349.4|SFT2 domain containing 3
hg19_v2_chr10_+_104614008_104614042	0.00157772	HOXD9	ENST00000369883.3|C10orf32|ENSG00000166275.11|chromosome 10 open reading frame 32
hg19_v2_chr5_+_125967372_125967417	0.00127734	HOXD9	ENST00000357147.3|C5orf48|ENSG00000196900.4|chromosome 5 open reading frame 48
hg19_v2_chr7_-_36764004_36764059	0.000994554	HOXD9	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr11_-_8986474_8986558	0.000906817	HOXD9	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr17_+_60447579_60447579	0.000771185	HOXD9	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr2_+_28824786_28824791	0.000751438	HOXD9	ENST00000541605.1|PLB1|ENSG00000163803.8|phospholipase B1
hg19_v2_chr3_-_107777208_107777236	0.00071496	HOXD9	ENST00000398258.3|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr3_-_100712292_100712338	0.000472506	HOXD9	ENST00000495063.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000530539.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
