hg19_v2_chr1_+_79086088_79086182	2.54032	IRF9	ENST00000370751.5|IFI44L|ENSG00000137959.11|interferon-induced protein 44-like 	ENST00000342282.3|IFI44L|ENSG00000137959.11|interferon-induced protein 44-like
hg19_v2_chr6_+_72922590_72922605	1.16417	IRF9	ENST00000523963.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr6_+_72922505_72922516	1.15759	IRF9	ENST00000401910.3|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_162602244_162602289	1.00082	IRF9	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr18_-_25616519_25616549	0.941278	IRF9	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr13_-_43566301_43566422	0.936891	IRF9	ENST00000398762.3|EPSTI1|ENSG00000133106.10|epithelial stromal interaction 1 (breast) 	ENST00000313640.7|EPSTI1|ENSG00000133106.10|epithelial stromal interaction 1 (breast) 	ENST00000313624.7|EPSTI1|ENSG00000133106.10|epithelial stromal interaction 1 (breast)
hg19_v2_chr17_+_6659153_6659164	0.824654	IRF9	ENST00000441631.1|XAF1|ENSG00000132530.12|XIAP associated factor 1 	ENST00000438512.1|XAF1|ENSG00000132530.12|XIAP associated factor 1 	ENST00000346752.4|XAF1|ENSG00000132530.12|XIAP associated factor 1 	ENST00000361842.3|XAF1|ENSG00000132530.12|XIAP associated factor 1
hg19_v2_chr1_+_79115503_79115530	0.787304	IRF9	ENST00000370747.4|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000438486.1|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000545124.1|IFI44|ENSG00000137965.6|interferon-induced protein 44
hg19_v2_chr5_+_32710736_32710788	0.652849	IRF9	ENST00000415685.2|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr11_-_57335280_57335433	0.601282	IRF9	ENST00000287156.4|UBE2L6|ENSG00000156587.11|ubiquitin-conjugating enzyme E2L 6
hg19_v2_chr14_+_24630465_24630531	0.519835	IRF9	ENST00000557894.1|IRF9|ENSG00000213928.4|interferon regulatory factor 9 	ENST00000559284.1|IRF9|ENSG00000213928.4|interferon regulatory factor 9 	ENST00000560275.1|IRF9|ENSG00000213928.4|interferon regulatory factor 9
hg19_v2_chr3_-_122283079_122283095	0.517911	IRF9	ENST00000471785.1|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9 	ENST00000466126.1|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9
hg19_v2_chr7_+_134551583_134551599	0.506087	IRF9	ENST00000435928.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr3_-_122283424_122283498	0.490167	IRF9	ENST00000477522.2|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9 	ENST00000360356.2|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9
hg19_v2_chr10_-_25241499_25241541	0.477348	IRF9	ENST00000376378.1|PRTFDC1|ENSG00000099256.14|phosphoribosyl transferase domain containing 1 	ENST00000376376.3|PRTFDC1|ENSG00000099256.14|phosphoribosyl transferase domain containing 1 	ENST00000320152.6|PRTFDC1|ENSG00000099256.14|phosphoribosyl transferase domain containing 1
hg19_v2_chrX_-_63005405_63005440	0.468024	IRF9	ENST00000374878.1|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9 	ENST00000437457.2|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v2_chr11_-_86383157_86383240	0.441077	IRF9	ENST00000393324.3|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr6_-_82462425_82462491	0.433701	IRF9	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr11_-_86383650_86383678	0.409409	IRF9	ENST00000526944.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000530335.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000543262.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000524826.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr10_+_91092241_91092294	0.379189	IRF9	ENST00000371811.4|IFIT3|ENSG00000119917.9|interferon-induced protein with tetratricopeptide repeats 3
hg19_v2_chr1_+_948803_948885	0.372993	IRF9	ENST00000379389.4|ISG15|ENSG00000187608.5|ISG15 ubiquitin-like modifier
hg19_v2_chr6_-_24936170_24936199	0.368931	IRF9	ENST00000538035.1|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr15_+_91643442_91643521	0.358756	IRF9	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chrX_+_22056165_22056173	0.356444	IRF9	ENST00000535894.1|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr10_+_91174314_91174403	0.330161	IRF9	ENST00000371795.4|IFIT5|ENSG00000152778.7|interferon-induced protein with tetratricopeptide repeats 5
hg19_v2_chr2_-_152146385_152146571	0.325072	IRF9	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr4_+_186990298_186990342	0.319035	IRF9	ENST00000296795.3|TLR3|ENSG00000164342.8|toll-like receptor 3 	ENST00000513189.1|TLR3|ENSG00000164342.8|toll-like receptor 3
hg19_v2_chr17_+_78234625_78234683	0.31113	IRF9	ENST00000508628.2|RNF213|ENSG00000173821.15|ring finger protein 213 	ENST00000582970.1|RNF213|ENSG00000173821.15|ring finger protein 213 	ENST00000456466.1|RNF213|ENSG00000173821.15|ring finger protein 213 	ENST00000319921.4|RNF213|ENSG00000173821.15|ring finger protein 213
hg19_v2_chr19_-_17516449_17516463	0.307691	IRF9	ENST00000252593.6|BST2|ENSG00000130303.8|bone marrow stromal cell antigen 2
hg19_v2_chr17_+_46908350_46908418	0.273607	IRF9	ENST00000258947.3|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000509507.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000448105.2|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000570513.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000509415.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000513119.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000416445.2|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000508679.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2 	ENST00000505071.1|CALCOCO2|ENSG00000136436.10|calcium binding and coiled-coil domain 2
hg19_v2_chr4_-_77134742_77134765	0.273123	IRF9	ENST00000452464.2|SCARB2|ENSG00000138760.4|scavenger receptor class B, member 2
hg19_v2_chr3_+_151986709_151986892	0.271254	IRF9	ENST00000495875.2|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000493459.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324210.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000459747.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr19_+_10196981_10197034	0.256758	IRF9	ENST00000591813.1|C19orf66|ENSG00000130813.13|chromosome 19 open reading frame 66
hg19_v2_chr11_-_615570_615728	0.256747	IRF9	ENST00000525445.1|IRF7|ENSG00000185507.15|interferon regulatory factor 7 	ENST00000348655.6|IRF7|ENSG00000185507.15|interferon regulatory factor 7 	ENST00000397566.1|IRF7|ENSG00000185507.15|interferon regulatory factor 7
hg19_v2_chr10_+_115439630_115439660	0.249892	IRF9	ENST00000369318.3|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr16_-_15736881_15736928	0.248417	IRF9	ENST00000540441.2|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr7_+_100728720_100728803	0.24638	IRF9	ENST00000306085.6|TRIM56|ENSG00000169871.8|tripartite motif containing 56 	ENST00000412507.1|TRIM56|ENSG00000169871.8|tripartite motif containing 56
hg19_v2_chr16_+_28875126_28875195	0.245948	IRF9	ENST00000359285.5|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1 	ENST00000538342.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr3_+_187086120_187086211	0.240919	IRF9	ENST00000259030.2|RTP4|ENSG00000136514.2|receptor (chemosensory) transporter protein 4
hg19_v2_chr10_+_115439282_115439428	0.23475	IRF9	ENST00000369321.2|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000345633.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr14_+_100531615_100531705	0.231597	IRF9	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr6_+_6588902_6588960	0.231068	IRF9	ENST00000230568.4|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr3_-_121379739_121379771	0.226227	IRF9	ENST00000428394.2|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1 	ENST00000314583.3|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1
hg19_v2_chr10_+_115439699_115439712	0.222737	IRF9	ENST00000369315.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr4_-_77135046_77135063	0.218866	IRF9	ENST00000264896.2|SCARB2|ENSG00000138760.4|scavenger receptor class B, member 2
hg19_v2_chr3_-_146262365_146262412	0.194101	IRF9	ENST00000448787.2|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr17_-_4167142_4167281	0.186273	IRF9	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr3_-_146262352_146262363	0.184902	IRF9	ENST00000462666.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chrX_-_39956656_39956751	0.174273	IRF9	ENST00000397354.3|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378444.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chrX_-_48858630_48858660	0.171419	IRF9	ENST00000376425.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376444.3|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr3_-_146262428_146262446	0.165908	IRF9	ENST00000486631.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr6_+_126240442_126240459	0.165863	IRF9	ENST00000448104.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7 	ENST00000438495.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7 	ENST00000444128.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chrX_-_48858667_48858680	0.163828	IRF9	ENST00000376423.4|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1 	ENST00000376441.1|GRIPAP1|ENSG00000068400.9|GRIP1 associated protein 1
hg19_v2_chr2_-_152118352_152118393	0.16227	IRF9	ENST00000331426.5|RBM43|ENSG00000184898.6|RNA binding motif protein 43
hg19_v2_chr9_-_21995300_21995358	0.156536	IRF9	ENST00000498628.2|CDKN2A|ENSG00000147889.12|cyclin-dependent kinase inhibitor 2A
hg19_v2_chr1_+_241695424_241695440	0.155533	IRF9	ENST00000366558.3|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 	ENST00000366559.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr13_+_50070491_50070538	0.149745	IRF9	ENST00000496612.1|PHF11|ENSG00000136147.12|PHD finger protein 11 	ENST00000357596.3|PHF11|ENSG00000136147.12|PHD finger protein 11 	ENST00000485919.1|PHF11|ENSG00000136147.12|PHD finger protein 11 	ENST00000442195.1|PHF11|ENSG00000136147.12|PHD finger protein 11
hg19_v2_chr19_+_17516909_17516954	0.148879	IRF9	ENST00000601007.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000594913.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000599975.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000600514.1|MVB12A|ENSG00000141971.8|multivesicular body subunit 12A
hg19_v2_chr3_-_28390581_28390618	0.147317	IRF9	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr14_-_67981870_67981913	0.145961	IRF9	ENST00000555994.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr3_-_146262488_146262548	0.144496	IRF9	ENST00000487389.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr1_+_236687881_236687913	0.14292	IRF9	ENST00000526634.1|LGALS8|ENSG00000116977.14|lectin, galactoside-binding, soluble, 8
hg19_v2_chr10_+_91061712_91061812	0.142081	IRF9	ENST00000371826.3|IFIT2|ENSG00000119922.7|interferon-induced protein with tetratricopeptide repeats 2
hg19_v2_chr1_+_154377669_154377699	0.138765	IRF9	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr13_+_50070077_50070152	0.138274	IRF9	ENST00000378319.3|PHF11|ENSG00000136147.12|PHD finger protein 11 	ENST00000426879.1|PHF11|ENSG00000136147.12|PHD finger protein 11
hg19_v2_chr9_-_21995249_21995276	0.137787	IRF9	ENST00000494262.1|CDKN2A|ENSG00000147889.12|cyclin-dependent kinase inhibitor 2A
hg19_v2_chr2_+_205410516_205410563	0.133438	IRF9	ENST00000406610.2|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta 	ENST00000462231.1|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta
hg19_v2_chr3_-_146262293_146262308	0.132293	IRF9	ENST00000448205.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr15_+_74287035_74287117	0.130825	IRF9	ENST00000395132.2|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000268059.6|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000354026.6|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000268058.3|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000565898.1|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000569477.1|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000569965.1|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000567543.1|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000436891.3|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000435786.2|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000564428.1|PML|ENSG00000140464.15|promyelocytic leukemia 	ENST00000359928.4|PML|ENSG00000140464.15|promyelocytic leukemia
hg19_v2_chr12_-_121476750_121476790	0.125558	IRF9	ENST00000543677.1|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr12_-_121477039_121477054	0.124035	IRF9	ENST00000257570.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr4_+_37892682_37892757	0.122278	IRF9	ENST00000508802.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000261439.4|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 	ENST00000402522.1|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v2_chr11_-_67141090_67141208	0.120683	IRF9	ENST00000312438.7|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chr1_-_207119738_207119839	0.119783	IRF9	ENST00000356495.4|PIGR|ENSG00000162896.5|polymeric immunoglobulin receptor
hg19_v2_chr22_+_18632666_18632764	0.118956	IRF9	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr3_-_146262637_146262660	0.1184	IRF9	ENST00000472349.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1 	ENST00000342435.4|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr20_+_11898507_11898565	0.11754	IRF9	ENST00000378226.2|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr12_+_6881678_6881707	0.117133	IRF9	ENST00000441671.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3 	ENST00000203629.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3
hg19_v2_chr12_-_56753858_56753930	0.113889	IRF9	ENST00000314128.4|STAT2|ENSG00000170581.9|signal transducer and activator of transcription 2, 113kDa 	ENST00000557235.1|STAT2|ENSG00000170581.9|signal transducer and activator of transcription 2, 113kDa 	ENST00000418572.2|STAT2|ENSG00000170581.9|signal transducer and activator of transcription 2, 113kDa
hg19_v2_chr6_-_110736742_110736782	0.110589	IRF9	ENST00000368924.3|DDO|ENSG00000203797.5|D-aspartate oxidase 	ENST00000368923.3|DDO|ENSG00000203797.5|D-aspartate oxidase
hg19_v2_chr12_-_27167233_27167367	0.106873	IRF9	ENST00000535819.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543803.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000535423.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000539741.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000343028.4|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000545600.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543088.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3
hg19_v2_chr1_+_241695670_241695705	0.102694	IRF9	ENST00000366557.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr19_+_17516531_17516587	0.097493	IRF9	ENST00000528911.1|MVB12A|ENSG00000141971.8|multivesicular body subunit 12A 	ENST00000595892.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000528604.1|MVB12A|ENSG00000141971.8|multivesicular body subunit 12A 	ENST00000500836.2|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000598546.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000600369.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000598356.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9	ENST00000594426.1|CTD-2521M24.9|ENSG00000269640.1|CTD-2521M24.9
hg19_v2_chr7_+_18535893_18535926	0.0933208	IRF9	ENST00000432645.2|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000441542.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr1_-_182558374_182558403	0.0864528	IRF9	ENST00000367559.3|RNASEL|ENSG00000135828.7|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 	ENST00000539397.1|RNASEL|ENSG00000135828.7|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
hg19_v2_chr5_-_142783175_142783297	0.0844095	IRF9	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr17_+_38296576_38296604	0.0841094	IRF9	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr14_-_67981916_67982021	0.0823222	IRF9	ENST00000357461.2|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr3_+_122399444_122399465	0.0817904	IRF9	ENST00000474629.2|PARP14|ENSG00000173193.9|poly (ADP-ribose) polymerase family, member 14
hg19_v2_chr11_-_615942_615999	0.0784064	IRF9	ENST00000397562.3|IRF7|ENSG00000185507.15|interferon regulatory factor 7 	ENST00000330243.5|IRF7|ENSG00000185507.15|interferon regulatory factor 7 	ENST00000397570.1|IRF7|ENSG00000185507.15|interferon regulatory factor 7 	ENST00000397574.2|IRF7|ENSG00000185507.15|interferon regulatory factor 7
hg19_v2_chr2_-_37384175_37384208	0.0736846	IRF9	ENST00000411537.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000233057.4|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000395127.2|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2 	ENST00000390013.3|EIF2AK2|ENSG00000055332.12|eukaryotic translation initiation factor 2-alpha kinase 2
hg19_v2_chr5_-_142783694_142783842	0.0690936	IRF9	ENST00000394466.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr6_-_105584560_105584742	0.0657722	IRF9	ENST00000336775.5|BVES|ENSG00000112276.9|blood vessel epicardial substance
hg19_v2_chr3_-_122283100_122283162	0.0614075	IRF9	ENST00000492382.1|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9 	ENST00000462315.1|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9
hg19_v2_chr3_-_28390415_28390550	0.0607189	IRF9	ENST00000414162.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2 	ENST00000420543.2|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr3_-_28390298_28390362	0.0601526	IRF9	ENST00000457172.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr3_-_141747459_141747507	0.0563811	IRF9	ENST00000477292.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000478006.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000495310.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000486111.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr19_+_16254488_16254551	0.0497028	IRF9	ENST00000588246.1|HSH2D|ENSG00000196684.8|hematopoietic SH2 domain containing 	ENST00000593031.1|HSH2D|ENSG00000196684.8|hematopoietic SH2 domain containing
hg19_v2_chr10_-_7513904_7514008	0.0495312	IRF9	ENST00000420395.1|RP5-1031D4.2|ENSG00000232591.1|RP5-1031D4.2
hg19_v2_chr12_-_121476959_121477003	0.0417221	IRF9	ENST00000339275.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr20_+_61436146_61436197	0.0401436	IRF9	ENST00000290291.6|OGFR|ENSG00000060491.12|opioid growth factor receptor
hg19_v2_chr9_+_102668915_102669024	0.0346401	IRF9	ENST00000259400.6|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000531035.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000525640.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000534052.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000526607.1|STX17|ENSG00000136874.6|syntaxin 17
hg19_v2_chr9_-_33264557_33264668	0.0329498	IRF9	ENST00000473781.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000488499.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr2_+_205410723_205410723	0.0297919	IRF9	ENST00000358768.2|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta 	ENST00000351153.1|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta 	ENST00000349953.3|PARD3B|ENSG00000116117.13|par-3 family cell polarity regulator beta
hg19_v2_chr8_-_27941380_27941403	0.0198738	IRF9	ENST00000413272.2|NUGGC|ENSG00000189233.7|nuclear GTPase, germinal center associated 	ENST00000341513.6|NUGGC|ENSG00000189233.7|nuclear GTPase, germinal center associated
hg19_v2_chr18_+_3262954_3263072	0.0178845	IRF9	ENST00000584539.1|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory
hg19_v2_chr6_-_33282024_33282046	0.015103	IRF9	ENST00000475304.1|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000489157.1|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr3_-_142166846_142166867	0.0106081	IRF9	ENST00000463916.1|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1 	ENST00000544157.1|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr16_+_28962128_28962335	0.00893453	IRF9	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr3_-_142166904_142166916	0.00858688	IRF9	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr6_-_33281979_33281992	0.00761981	IRF9	ENST00000426633.2|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin) 	ENST00000467025.1|TAPBP|ENSG00000231925.7|TAP binding protein (tapasin)
hg19_v2_chr18_-_67624160_67624238	0.00727214	IRF9	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr3_+_122283064_122283091	0.00499055	IRF9	ENST00000296161.4|DTX3L|ENSG00000163840.5|deltex 3-like (Drosophila)
hg19_v2_chr9_+_5510558_5510570	0.00416608	IRF9	ENST00000397747.3|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
