hg19_v2_chr13_-_38172863_38172981	3.5271	MSX1	ENST00000541481.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379743.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379742.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379749.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000541179.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379747.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor
hg19_v2_chr5_-_75919253_75919269	1.12831	MSX1	ENST00000296641.4|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr2_-_145278475_145278621	1.08157	MSX1	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr8_+_97597148_97597173	0.977355	MSX1	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr2_-_158345462_158345480	0.792707	MSX1	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr9_+_79074068_79074150	0.756394	MSX1	ENST00000444201.2|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2 	ENST00000376730.4|GCNT1|ENSG00000187210.8|glucosaminyl (N-acetyl) transferase 1, core 2
hg19_v2_chr1_-_72566613_72566642	0.745966	MSX1	ENST00000306821.3|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr6_+_28249332_28249391	0.710691	MSX1	ENST00000259883.3|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr6_+_28249299_28249319	0.707164	MSX1	ENST00000405948.2|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr9_+_90112117_90112164	0.706948	MSX1	ENST00000358077.5|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr5_+_82767583_82767744	0.676987	MSX1	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr5_+_82767487_82767510	0.653817	MSX1	ENST00000343200.5|VCAN|ENSG00000038427.11|versican 	ENST00000342785.4|VCAN|ENSG00000038427.11|versican
hg19_v2_chr5_+_82767284_82767310	0.644091	MSX1	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr14_+_52327109_52327132	0.641256	MSX1	ENST00000335281.4|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chr19_-_53662257_53662319	0.62285	MSX1	ENST00000599096.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000334197.7|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000597183.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601804.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601469.2|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000452676.2|ZNF347|ENSG00000197937.8|zinc finger protein 347
hg19_v2_chr5_-_75919217_75919250	0.578321	MSX1	ENST00000504899.1|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr18_-_70532906_70532934	0.479651	MSX1	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr5_+_67586465_67586534	0.478223	MSX1	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr4_-_57547454_57547469	0.46092	MSX1	ENST00000556376.2|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr11_+_12766583_12766592	0.33873	MSX1	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr1_+_210501589_210501609	0.314854	MSX1	ENST00000413764.2|HHAT|ENSG00000054392.8|hedgehog acyltransferase 	ENST00000541565.1|HHAT|ENSG00000054392.8|hedgehog acyltransferase
hg19_v2_chr11_+_12132117_12132160	0.300791	MSX1	ENST00000256194.4|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2
hg19_v2_chr16_-_66583701_66583783	0.293929	MSX1	ENST00000527800.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000525974.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000563369.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr6_+_28092338_28092412	0.293327	MSX1	ENST00000340487.4|ZSCAN16|ENSG00000196812.4|zinc finger and SCAN domain containing 16
hg19_v2_chr19_-_53757941_53758088	0.277483	MSX1	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr18_-_5396271_5396333	0.276635	MSX1	ENST00000579951.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr5_+_140762268_140762467	0.257967	MSX1	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr2_+_158114051_158114110	0.253777	MSX1	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr7_+_148287657_148287657	0.251327	MSX1	ENST00000307003.2|C7orf33|ENSG00000170279.2|chromosome 7 open reading frame 33
hg19_v2_chr11_+_101785727_101785767	0.24563	MSX1	ENST00000263468.8|KIAA1377|ENSG00000110318.9|KIAA1377
hg19_v2_chr16_-_66584059_66584315	0.241141	MSX1	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr17_-_5321549_5321549	0.235832	MSX1	ENST00000572809.1|NUP88|ENSG00000108559.7|nucleoporin 88kDa
hg19_v2_chr20_+_56964169_56964182	0.232256	MSX1	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr8_-_25281747_25281779	0.214652	MSX1	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr6_+_136172820_136172846	0.214085	MSX1	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr1_+_224370873_224370968	0.211557	MSX1	ENST00000323699.4|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1 	ENST00000391877.3|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1
hg19_v2_chr6_-_109777128_109777203	0.208093	MSX1	ENST00000358807.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENST00000358577.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg19_v2_chr6_+_26240561_26240628	0.204834	MSX1	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr19_-_53758094_53758147	0.203975	MSX1	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr17_-_8113542_8113572	0.203006	MSX1	ENST00000578549.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000535053.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000582368.1|AURKB|ENSG00000178999.8|aurora kinase B
hg19_v2_chr10_+_17270214_17270258	0.198668	MSX1	ENST00000544301.1|VIM|ENSG00000026025.9|vimentin
hg19_v2_chr16_+_21689835_21689835	0.198161	MSX1	ENST00000286149.4|OTOA|ENSG00000155719.12|otoancorin 	ENST00000388958.3|OTOA|ENSG00000155719.12|otoancorin
hg19_v2_chr13_+_50570019_50570028	0.196602	MSX1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr12_+_54422142_54422239	0.194794	MSX1	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr13_+_49551020_49551097	0.180869	MSX1	ENST00000541916.1|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr11_-_102401469_102401488	0.179566	MSX1	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr12_-_10978957_10978957	0.173272	MSX1	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr1_-_54405773_54405874	0.171879	MSX1	ENST00000371376.1|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr1_+_84630645_84630652	0.167343	MSX1	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr10_+_13142225_13142246	0.161649	MSX1	ENST00000378747.3|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr11_+_61197508_61197545	0.160598	MSX1	ENST00000541135.1|RP11-286N22.8|ENSG00000256591.1|Uncharacterized protein  	ENST00000301761.2|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr6_+_131894284_131894378	0.152898	MSX1	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr6_+_6588316_6588341	0.150654	MSX1	ENST00000379953.2|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr4_-_186696425_186696452	0.14946	MSX1	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr16_-_71518504_71518542	0.148896	MSX1	ENST00000565100.2|ZNF19|ENSG00000157429.11|zinc finger protein 19
hg19_v2_chr1_+_158985457_158985468	0.145696	MSX1	ENST00000567661.1|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16 	ENST00000474473.1|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr5_+_175490540_175490540	0.143588	MSX1	ENST00000515817.1|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chr4_+_113568207_113568367	0.138139	MSX1	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr15_-_95870310_95870344	0.136216	MSX1	ENST00000508732.2|CTD-2536I1.1|ENSG00000248441.2|CTD-2536I1.1
hg19_v2_chr2_-_169746878_169746970	0.125667	MSX1	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr14_+_52327350_52327371	0.125413	MSX1	ENST00000555472.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2 	ENST00000556766.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chr11_+_62037622_62037637	0.119463	MSX1	ENST00000227918.2|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2 	ENST00000525380.1|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2
hg19_v2_chr13_+_103459704_103459704	0.115704	MSX1	ENST00000602836.1|BIVM-ERCC5|ENSG00000270181.1|BIVM-ERCC5 readthrough
hg19_v2_chr11_+_61197572_61197620	0.112443	MSX1	ENST00000542074.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000534878.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000537782.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000543265.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr9_+_133539981_133539981	0.111962	MSX1	ENST00000253008.2|PRDM12|ENSG00000130711.3|PR domain containing 12
hg19_v2_chr8_-_121824374_121824391	0.110151	MSX1	ENST00000517992.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr15_-_77712477_77712499	0.108681	MSX1	ENST00000560626.2|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1
hg19_v2_chr21_+_33671160_33671172	0.107152	MSX1	ENST00000303645.5|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr19_+_16059818_16059818	0.106366	MSX1	ENST00000322107.1|OR10H4|ENSG00000176231.1|olfactory receptor, family 10, subfamily H, member 4
hg19_v2_chr10_+_135050908_135050908	0.105582	MSX1	ENST00000325980.9|VENTX|ENSG00000151650.7|VENT homeobox
hg19_v2_chr9_-_15510287_15510309	0.102886	MSX1	ENST00000397519.2|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr5_-_177207634_177207677	0.100924	MSX1	ENST00000513554.1|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A 	ENST00000440605.3|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A
hg19_v2_chr14_+_55494323_55494345	0.0974365	MSX1	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chrX_-_103499602_103499617	0.0946338	MSX1	ENST00000372588.4|ESX1|ENSG00000123576.5|ESX homeobox 1
hg19_v2_chr10_+_13141585_13141603	0.0940205	MSX1	ENST00000378764.2|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr10_-_32667660_32667735	0.0931434	MSX1	ENST00000375110.2|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr3_-_47555167_47555251	0.092471	MSX1	ENST00000296149.4|ELP6|ENSG00000163832.11|elongator acetyltransferase complex subunit 6
hg19_v2_chr14_+_55595762_55595782	0.0917981	MSX1	ENST00000254301.9|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr11_+_94245617_94245747	0.0891955	MSX1	ENST00000542198.1|RP11-867G2.2|ENSG00000257057.1|long intergenic non-protein coding RNA 1171
hg19_v2_chr7_+_7811992_7811992	0.0890429	MSX1	ENST00000406829.1|RPA3-AS1|ENSG00000219545.5|RPA3 antisense RNA 1
hg19_v2_chr3_+_114012819_114012833	0.0877077	MSX1	ENST00000383671.3|TIGIT|ENSG00000181847.7|T cell immunoreceptor with Ig and ITIM domains
hg19_v2_chr15_+_79166065_79166163	0.08644	MSX1	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr14_+_55493920_55494013	0.0854379	MSX1	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr6_+_118869452_118869475	0.0816689	MSX1	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr3_+_108308513_108308558	0.0783436	MSX1	ENST00000361582.3|DZIP3|ENSG00000198919.8|DAZ interacting zinc finger protein 3
hg19_v2_chr14_-_75389925_75389969	0.0778646	MSX1	ENST00000556776.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr20_+_5987890_5987904	0.0772481	MSX1	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr11_-_66964638_66964638	0.0772278	MSX1	ENST00000444002.2|AP001885.1|ENSG00000179038.7|AP001885.1
hg19_v2_chr15_-_42500351_42500523	0.0754471	MSX1	ENST00000348544.4|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae) 	ENST00000318006.5|VPS39|ENSG00000166887.11|vacuolar protein sorting 39 homolog (S. cerevisiae)
hg19_v2_chr14_+_55595960_55595978	0.0750905	MSX1	ENST00000554715.1|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr8_+_28748765_28748833	0.0746377	MSX1	ENST00000355231.5|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr14_+_22964877_22964914	0.0740131	MSX1	ENST00000390494.1|TRAJ43|ENSG00000211846.1|T cell receptor alpha joining 43
hg19_v2_chr5_-_11588907_11588967	0.0728374	MSX1	ENST00000513598.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000503622.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr12_-_11150474_11150474	0.0723829	MSX1	ENST00000538986.1|TAS2R20|ENSG00000255837.1|taste receptor, type 2, member 20
hg19_v2_chr11_-_114430570_114430581	0.071368	MSX1	ENST00000251921.2|NXPE1|ENSG00000095110.3|neurexophilin and PC-esterase domain family, member 1
hg19_v2_chr2_+_196313239_196313256	0.0693234	MSX1	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr7_+_23338819_23338973	0.0687768	MSX1	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr16_+_69345243_69345312	0.0670049	MSX1	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr20_+_34129770_34129879	0.0666933	MSX1	ENST00000348547.2|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000357394.4|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000447986.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000279052.6|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000416206.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000411577.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000413587.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3
hg19_v2_chr15_+_51669444_51669479	0.065951	MSX1	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr1_+_202091980_202091991	0.0642978	MSX1	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr4_-_100140331_100140409	0.06035	MSX1	ENST00000407820.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394897.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000508558.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394899.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V)
hg19_v2_chr13_-_81801115_81801122	0.0593408	MSX1	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr17_-_37934466_37934481	0.058898	MSX1	ENST00000583368.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr19_-_7812446_7812473	0.0587158	MSX1	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr20_+_5731027_5731055	0.0566887	MSX1	ENST00000378979.4|C20orf196|ENSG00000171984.10|chromosome 20 open reading frame 196 	ENST00000303142.6|C20orf196|ENSG00000171984.10|chromosome 20 open reading frame 196
hg19_v2_chr8_+_24241969_24241999	0.0549956	MSX1	ENST00000522298.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr2_-_109605663_109605828	0.0532987	MSX1	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr3_-_21792838_21792927	0.0530581	MSX1	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr10_+_135204338_135204338	0.0522831	MSX1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr6_-_31830655_31830683	0.052267	MSX1	ENST00000375631.4|NEU1|ENSG00000204386.6|sialidase 1 (lysosomal sialidase)
hg19_v2_chr6_-_76072719_76072770	0.0507239	MSX1	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr1_+_160160283_160160292	0.0493763	MSX1	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr9_+_75229616_75229616	0.0483122	MSX1	ENST00000340019.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr8_+_24241789_24241802	0.0480656	MSX1	ENST00000256412.4|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1 	ENST00000538205.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr1_-_167487808_167487847	0.0477444	MSX1	ENST00000392122.3|CD247|ENSG00000198821.6|CD247 molecule
hg19_v2_chr14_-_101295407_101295537	0.0474494	MSX1	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr21_+_17792672_17792775	0.0464782	MSX1	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr14_+_77582905_77582916	0.0450594	MSX1	ENST00000557408.1|TMEM63C|ENSG00000165548.6|transmembrane protein 63C
hg19_v2_chr1_+_8021954_8022038	0.0450493	MSX1	ENST00000377491.1|PARK7|ENSG00000116288.8|parkinson protein 7 	ENST00000377488.1|PARK7|ENSG00000116288.8|parkinson protein 7
hg19_v2_chr3_-_93781750_93781831	0.0419186	MSX1	ENST00000314636.2|DHFRL1|ENSG00000178700.3|dihydrofolate reductase-like 1
hg19_v2_chr21_+_33671264_33671283	0.0408152	MSX1	ENST00000339944.4|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr7_+_107220899_107220915	0.0403447	MSX1	ENST00000379117.2|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29 	ENST00000473124.1|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr1_+_160160346_160160401	0.0402959	MSX1	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr5_-_147162078_147162106	0.0401841	MSX1	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr7_+_99425633_99425739	0.0371167	MSX1	ENST00000354829.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000421837.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000417625.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000342499.4|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000444905.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000415413.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000312017.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000222382.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43
hg19_v2_chr1_-_167487758_167487792	0.0368885	MSX1	ENST00000362089.5|CD247|ENSG00000198821.6|CD247 molecule
hg19_v2_chr18_+_61637159_61637483	0.035201	MSX1	ENST00000397985.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000353706.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000542677.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000397988.3|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000448851.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8
hg19_v2_chr9_-_70465758_70465758	0.0335256	MSX1	ENST00000489273.1|CBWD5|ENSG00000147996.12|COBW domain containing 5
hg19_v2_chr11_-_92931098_92931173	0.033433	MSX1	ENST00000326402.4|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr6_-_32908765_32908786	0.032519	MSX1	ENST00000416244.2|HLA-DMB|ENSG00000242574.4|major histocompatibility complex, class II, DM beta
hg19_v2_chr22_+_41697520_41697613	0.0319552	MSX1	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chrX_+_11311533_11311533	0.0304143	MSX1	ENST00000380714.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000380712.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000348912.4|AMELX|ENSG00000125363.10|amelogenin, X-linked
hg19_v2_chr1_-_149908217_149908248	0.0302962	MSX1	ENST00000369140.3|MTMR11|ENSG00000014914.15|myotubularin related protein 11
hg19_v2_chr10_-_29923893_29923907	0.0298839	MSX1	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr2_-_136288113_136288301	0.0292325	MSX1	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chr7_+_138818490_138818541	0.0275732	MSX1	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr19_-_20150014_20150085	0.0267431	MSX1	ENST00000358523.5|ZNF682|ENSG00000197124.7|zinc finger protein 682 	ENST00000397162.1|ZNF682|ENSG00000197124.7|zinc finger protein 682 	ENST00000601100.1|ZNF682|ENSG00000197124.7|zinc finger protein 682
hg19_v2_chr9_+_44868935_44868935	0.0254724	MSX1	ENST00000448436.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr19_+_55043977_55044008	0.024725	MSX1	ENST00000335056.3|KIR3DX1|ENSG00000104970.6|killer cell immunoglobulin-like receptor, three domains, X1
hg19_v2_chr9_-_86593238_86593367	0.0211404	MSX1	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr1_+_76540386_76540445	0.0200381	MSX1	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chrX_-_122756660_122756696	0.0191104	MSX1	ENST00000441692.1|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr6_+_108616243_108616405	0.0178311	MSX1	ENST00000421954.1|LACE1|ENSG00000135537.12|lactation elevated 1
hg19_v2_chr3_+_93781728_93781760	0.0155429	MSX1	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr11_-_5345582_5345582	0.0123947	MSX1	ENST00000328813.2|OR51B2|ENSG00000184881.2|olfactory receptor, family 51, subfamily B, member 2
hg19_v2_chr19_-_7812397_7812426	0.0100344	MSX1	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr11_+_60681346_60681431	0.00699445	MSX1	ENST00000227525.3|TMEM109|ENSG00000110108.5|transmembrane protein 109
hg19_v2_chr13_-_52733980_52734002	0.00605314	MSX1	ENST00000339406.3|NEK3|ENSG00000136098.12|NIMA-related kinase 3
hg19_v2_chr4_+_159442878_159442977	0.00582409	MSX1	ENST00000307765.5|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1 	ENST00000423548.1|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr8_-_72274095_72274116	0.00464095	MSX1	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr11_+_92085262_92085262	0.0036209	MSX1	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr7_+_2636522_2636546	0.00322779	MSX1	ENST00000423196.1|IQCE|ENSG00000106012.13|IQ motif containing E
hg19_v2_chr4_-_164534657_164534701	0.00307927	MSX1	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr12_-_82752565_82752579	0.00141435	MSX1	ENST00000256151.7|CCDC59|ENSG00000133773.7|coiled-coil domain containing 59
