hg19_v2_chr1_+_78769549_78769568	0.622522	NKX2-2	ENST00000370758.1|PTGFR|ENSG00000122420.5|prostaglandin F receptor (FP)
hg19_v2_chr21_+_25801041_25801080	0.61997	NKX2-2	ENST00000453784.2|AP000476.1|ENSG00000237484.5|AP000476.1	ENST00000423581.1|AP000476.1|ENSG00000237484.5|AP000476.1
hg19_v2_chr8_+_97597148_97597173	0.613593	NKX2-2	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr4_-_156787425_156787429	0.598521	NKX2-2	ENST00000537611.2|ASIC5|ENSG00000256394.2|acid-sensing (proton-gated) ion channel family member 5
hg19_v2_chr5_+_82767583_82767744	0.561856	NKX2-2	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr5_+_82767487_82767510	0.543485	NKX2-2	ENST00000343200.5|VCAN|ENSG00000038427.11|versican 	ENST00000342785.4|VCAN|ENSG00000038427.11|versican
hg19_v2_chr13_+_102104980_102105050	0.542962	NKX2-2	ENST00000545560.2|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr8_-_122653630_122653661	0.531748	NKX2-2	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr13_+_102104952_102104966	0.50168	NKX2-2	ENST00000376180.3|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr2_-_238323007_238323038	0.471919	NKX2-2	ENST00000295550.4|COL6A3|ENSG00000163359.11|collagen, type VI, alpha 3
hg19_v2_chr6_+_151561085_151561146	0.422771	NKX2-2	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr2_+_152214098_152214115	0.420424	NKX2-2	ENST00000243347.3|TNFAIP6|ENSG00000123610.3|tumor necrosis factor, alpha-induced protein 6
hg19_v2_chr13_-_67802549_67802707	0.402975	NKX2-2	ENST00000328454.5|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377865.2|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr17_-_67138015_67138062	0.390749	NKX2-2	ENST00000284425.2|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6 	ENST00000590645.1|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v2_chr8_+_77593448_77593471	0.357676	NKX2-2	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr17_-_29641104_29641130	0.28651	NKX2-2	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr8_+_77593474_77593612	0.274314	NKX2-2	ENST00000455469.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4 	ENST00000050961.6|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr4_-_99578789_99578843	0.268976	NKX2-2	ENST00000511651.1|TSPAN5|ENSG00000168785.3|tetraspanin 5 	ENST00000505184.1|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr16_+_53241854_53241953	0.266871	NKX2-2	ENST00000565803.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chrX_+_100743031_100743031	0.260026	NKX2-2	ENST00000423738.3|ARMCX4|ENSG00000196440.7|armadillo repeat containing, X-linked 4
hg19_v2_chr3_+_142838091_142838173	0.258403	NKX2-2	ENST00000309575.3|CHST2|ENSG00000175040.4|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
hg19_v2_chr2_-_214014959_214015058	0.253529	NKX2-2	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chrM_+_12331_12348	0.24844	NKX2-2	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr5_-_150521192_150521229	0.238491	NKX2-2	ENST00000523714.1|ANXA6|ENSG00000197043.9|annexin A6 	ENST00000521749.1|ANXA6|ENSG00000197043.9|annexin A6
hg19_v2_chr9_-_21482312_21482312	0.225736	NKX2-2	ENST00000448696.3|IFNE|ENSG00000184995.6|interferon, epsilon
hg19_v2_chrX_-_70474377_70474425	0.213843	NKX2-2	ENST00000373978.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373981.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr9_-_20622478_20622542	0.20364	NKX2-2	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr17_-_29641084_29641103	0.202269	NKX2-2	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr2_+_152266604_152266683	0.201462	NKX2-2	ENST00000430328.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast)
hg19_v2_chr4_+_114214125_114214151	0.200969	NKX2-2	ENST00000509550.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr12_-_120315074_120315097	0.197826	NKX2-2	ENST00000261833.7|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21) 	ENST00000392521.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chr10_+_89420706_89420712	0.196524	NKX2-2	ENST00000427144.2|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
hg19_v2_chr2_-_145275228_145275464	0.190579	NKX2-2	ENST00000427902.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000409487.3|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000470879.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000435831.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr13_+_50570019_50570028	0.190533	NKX2-2	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr1_+_211433275_211433335	0.187251	NKX2-2	ENST00000367005.4|RCOR3|ENSG00000117625.9|REST corepressor 3
hg19_v2_chr1_-_227505289_227505415	0.186245	NKX2-2	ENST00000366765.3|CDC42BPA|ENSG00000143776.14|CDC42 binding protein kinase alpha (DMPK-like)
hg19_v2_chr4_-_99578776_99578786	0.185963	NKX2-2	ENST00000515287.1|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr1_+_162602244_162602289	0.185831	NKX2-2	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr6_+_151561506_151561522	0.182855	NKX2-2	ENST00000253332.1|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr1_+_104293028_104293028	0.178052	NKX2-2	ENST00000370079.3|AMY1C|ENSG00000187733.6|amylase, alpha 1C (salivary)
hg19_v2_chr18_-_70532906_70532934	0.174604	NKX2-2	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr4_+_124320665_124320702	0.172792	NKX2-2	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr5_-_78281603_78281617	0.169987	NKX2-2	ENST00000264914.4|ARSB|ENSG00000113273.11|arylsulfatase B
hg19_v2_chr15_-_52944231_52944268	0.157231	NKX2-2	ENST00000546305.2|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr6_+_28249299_28249319	0.156857	NKX2-2	ENST00000405948.2|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr6_+_28249332_28249391	0.155272	NKX2-2	ENST00000259883.3|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr12_-_49582978_49583107	0.154735	NKX2-2	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr13_+_111766897_111766966	0.154015	NKX2-2	ENST00000317133.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr1_+_104159999_104160068	0.151989	NKX2-2	ENST00000414303.2|AMY2A|ENSG00000243480.3|amylase, alpha 2A (pancreatic) 	ENST00000423678.1|AMY2A|ENSG00000243480.3|amylase, alpha 2A (pancreatic)
hg19_v2_chr3_+_189507460_189507471	0.148174	NKX2-2	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr12_-_10978957_10978957	0.147167	NKX2-2	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr3_+_63953415_63953430	0.1427	NKX2-2	ENST00000484332.1|ATXN7|ENSG00000163635.13|ataxin 7
hg19_v2_chr5_+_140602904_140603078	0.141184	NKX2-2	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr1_-_159880159_159880159	0.137823	NKX2-2	ENST00000599780.1|AL590560.1|ENSG00000269620.1|HCG1995379; Uncharacterized protein
hg19_v2_chr9_+_37667978_37668028	0.137474	NKX2-2	ENST00000539465.1|FRMPD1|ENSG00000070601.5|FERM and PDZ domain containing 1
hg19_v2_chrX_-_70473957_70474049	0.135682	NKX2-2	ENST00000373984.3|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000314425.5|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373982.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr4_+_113739244_113739320	0.135099	NKX2-2	ENST00000503271.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000503423.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000506722.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr14_-_82000140_82000229	0.135082	NKX2-2	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr12_-_102591604_102591623	0.134383	NKX2-2	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr15_-_56209306_56209344	0.132632	NKX2-2	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr17_+_42264322_42264376	0.131612	NKX2-2	ENST00000446571.3|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000357984.3|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000538716.2|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr4_-_119759795_119759833	0.131168	NKX2-2	ENST00000419654.2|SEC24D|ENSG00000150961.10|SEC24 family member D
hg19_v2_chr12_+_52056548_52056602	0.129379	NKX2-2	ENST00000545061.1|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit 	ENST00000355133.3|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr20_+_30102231_30102324	0.127287	NKX2-2	ENST00000335574.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000340852.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000398174.3|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000376127.3|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000344042.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13
hg19_v2_chr7_-_92855762_92855837	0.122894	NKX2-2	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr2_-_40739501_40739582	0.122487	NKX2-2	ENST00000403092.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000402441.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000448531.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr11_-_124981475_124981659	0.122324	NKX2-2	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr3_-_150920979_150921009	0.121609	NKX2-2	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr11_+_65266507_65266522	0.119649	NKX2-2	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr9_+_99690592_99690592	0.11849	NKX2-2	ENST00000354649.3|NUTM2G|ENSG00000188152.8|NUT family member 2G
hg19_v2_chr8_-_133772794_133772840	0.115936	NKX2-2	ENST00000519187.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000523829.1|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000356838.3|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000377901.4|TMEM71|ENSG00000165071.10|transmembrane protein 71 	ENST00000519304.1|TMEM71|ENSG00000165071.10|transmembrane protein 71
hg19_v2_chr16_+_22501658_22501658	0.114282	NKX2-2	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr17_-_8059638_8059723	0.112451	NKX2-2	ENST00000584202.1|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000354903.5|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000577253.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chrX_-_70474499_70474564	0.111577	NKX2-2	ENST00000353904.2|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr13_-_107220455_107220517	0.108842	NKX2-2	ENST00000400198.3|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chrX_-_30326445_30326605	0.108584	NKX2-2	ENST00000378963.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr10_+_124670121_124670217	0.107941	NKX2-2	ENST00000368894.1|FAM24A|ENSG00000203795.2|family with sequence similarity 24, member A
hg19_v2_chr15_-_60690163_60690242	0.107181	NKX2-2	ENST00000558998.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560165.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559780.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559467.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559956.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000332680.4|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000396024.3|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000421017.2|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560466.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558132.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559113.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557906.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558558.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560468.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559370.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558169.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559725.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558985.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000451270.2|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr3_-_122134882_122134951	0.106754	NKX2-2	ENST00000330689.4|WDR5B|ENSG00000196981.2|WD repeat domain 5B
hg19_v2_chr8_-_62559366_62559437	0.104735	NKX2-2	ENST00000522919.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr17_-_2966901_2966901	0.104451	NKX2-2	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr7_+_150065278_150065369	0.10428	NKX2-2	ENST00000519397.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000479668.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000540729.1|REPIN1|ENSG00000214022.7|replication initiator 1
hg19_v2_chr9_-_139361503_139361503	0.100742	NKX2-2	ENST00000453963.1|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr11_+_94277017_94277097	0.100717	NKX2-2	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr5_-_58335281_58335339	0.100714	NKX2-2	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr4_+_36283213_36283256	0.100588	NKX2-2	ENST00000357504.3|DTHD1|ENSG00000197057.4|death domain containing 1
hg19_v2_chr5_+_140800638_140800795	0.0998785	NKX2-2	ENST00000398587.2|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11 	ENST00000518882.1|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11
hg19_v2_chrX_+_47092314_47092431	0.0956395	NKX2-2	ENST00000218348.3|USP11|ENSG00000102226.5|ubiquitin specific peptidase 11
hg19_v2_chr15_-_56757329_56757342	0.0950714	NKX2-2	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr6_-_116833500_116833511	0.0950285	NKX2-2	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr2_+_170655322_170655405	0.0946178	NKX2-2	ENST00000260956.4|SSB|ENSG00000138385.11|Sjogren syndrome antigen B (autoantigen La) 	ENST00000417292.1|SSB|ENSG00000138385.11|Sjogren syndrome antigen B (autoantigen La)
hg19_v2_chr19_-_39881669_39881773	0.0938342	NKX2-2	ENST00000221266.7|PAF1|ENSG00000006712.10|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
hg19_v2_chr22_-_24093267_24093327	0.0934766	NKX2-2	ENST00000341976.3|ZNF70|ENSG00000187792.3|zinc finger protein 70
hg19_v2_chr17_+_48823896_48823936	0.0923941	NKX2-2	ENST00000511974.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr11_+_93479588_93479651	0.0923591	NKX2-2	ENST00000526335.1|C11orf54|ENSG00000182919.10|chromosome 11 open reading frame 54
hg19_v2_chr7_-_102715263_102715289	0.0910392	NKX2-2	ENST00000379305.3|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13
hg19_v2_chr15_+_69365265_69365266	0.0903407	NKX2-2	ENST00000415504.1|LINC00277|ENSG00000212766.5|long intergenic non-protein coding RNA 277
hg19_v2_chr2_+_152266392_152266482	0.0888267	NKX2-2	ENST00000444746.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000453091.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000428287.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000433166.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000420714.3|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000243326.5|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000414861.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast)
hg19_v2_chrX_+_34960907_34960918	0.0885032	NKX2-2	ENST00000329357.5|FAM47B|ENSG00000189132.5|family with sequence similarity 47, member B
hg19_v2_chr12_+_109826524_109826524	0.0883409	NKX2-2	ENST00000431443.2|MYO1H|ENSG00000174527.5|myosin IH
hg19_v2_chr15_+_65843130_65843157	0.0880075	NKX2-2	ENST00000569894.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr10_+_13203543_13203587	0.0876823	NKX2-2	ENST00000378714.3|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000479669.1|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000484800.2|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10
hg19_v2_chr2_+_201994569_201994589	0.0873253	NKX2-2	ENST00000457277.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chrX_+_83116142_83116164	0.0871025	NKX2-2	ENST00000329312.4|CYLC1|ENSG00000183035.8|cylicin, basic protein of sperm head cytoskeleton 1
hg19_v2_chr1_-_54405773_54405874	0.086747	NKX2-2	ENST00000371376.1|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr11_-_77850629_77850706	0.0865057	NKX2-2	ENST00000376156.3|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525870.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000530454.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525755.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000527099.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525761.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000299626.5|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase
hg19_v2_chr5_+_108083517_108083576	0.0855006	NKX2-2	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chrX_-_19817869_19817922	0.0851112	NKX2-2	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr8_+_71485681_71485681	0.0847077	NKX2-2	ENST00000391684.1|AC120194.1|ENSG00000213002.1|AC120194.1
hg19_v2_chr2_+_189157498_189157510	0.084596	NKX2-2	ENST00000359135.3|GULP1|ENSG00000144366.11|GULP, engulfment adaptor PTB domain containing 1
hg19_v2_chr6_-_27440460_27440505	0.0822939	NKX2-2	ENST00000377419.1|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chrX_+_36053908_36053908	0.0812894	NKX2-2	ENST00000378660.2|CHDC2|ENSG00000176034.8|calponin homology domain containing 2
hg19_v2_chr7_-_120497178_120497407	0.0807427	NKX2-2	ENST00000441017.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000424710.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000433758.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr5_-_110848189_110848240	0.079274	NKX2-2	ENST00000296632.3|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000512160.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000509887.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr3_-_33686925_33687000	0.0791246	NKX2-2	ENST00000485378.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000313350.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000487200.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr19_-_44174305_44174329	0.0778181	NKX2-2	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr9_+_71819927_71820053	0.0773492	NKX2-2	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr9_-_15510287_15510309	0.0756792	NKX2-2	ENST00000397519.2|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr7_-_102715172_102715258	0.0749059	NKX2-2	ENST00000456695.1|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13 	ENST00000455112.2|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13 	ENST00000440067.1|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13
hg19_v2_chr3_-_69101461_69101494	0.0737768	NKX2-2	ENST00000543976.1|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr2_+_189157536_189157566	0.0736696	NKX2-2	ENST00000409580.1|GULP1|ENSG00000144366.11|GULP, engulfment adaptor PTB domain containing 1 	ENST00000409637.3|GULP1|ENSG00000144366.11|GULP, engulfment adaptor PTB domain containing 1
hg19_v2_chr10_-_27529486_27529497	0.0736435	NKX2-2	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chrX_-_70474910_70475154	0.0725411	NKX2-2	ENST00000373988.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373998.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr20_+_56964169_56964182	0.0720514	NKX2-2	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr5_-_11588907_11588967	0.0719922	NKX2-2	ENST00000513598.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000503622.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr20_+_18488137_18488255	0.0716522	NKX2-2	ENST00000450074.1|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000262544.2|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000336714.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000377475.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae)
hg19_v2_chrX_+_115567767_115567790	0.070909	NKX2-2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr9_+_71820057_71820078	0.0708532	NKX2-2	ENST00000539225.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr1_-_115238207_115238241	0.0708407	NKX2-2	ENST00000520113.2|AMPD1|ENSG00000116748.15|adenosine monophosphate deaminase 1 	ENST00000369538.3|AMPD1|ENSG00000116748.15|adenosine monophosphate deaminase 1 	ENST00000353928.6|AMPD1|ENSG00000116748.15|adenosine monophosphate deaminase 1
hg19_v2_chr14_-_50154921_50155140	0.0701342	NKX2-2	ENST00000553805.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000554396.1|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000216367.5|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000539565.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit
hg19_v2_chr4_+_88720698_88720733	0.0694602	NKX2-2	ENST00000226284.5|IBSP|ENSG00000029559.5|integrin-binding sialoprotein
hg19_v2_chr3_+_159943362_159943423	0.0678303	NKX2-2	ENST00000326474.3|C3orf80|ENSG00000180044.3|chromosome 3 open reading frame 80
hg19_v2_chr20_-_13765526_13765578	0.0675981	NKX2-2	ENST00000202816.1|ESF1|ENSG00000089048.10|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
hg19_v2_chr5_+_135394840_135394875	0.0668322	NKX2-2	ENST00000503087.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa
hg19_v2_chr4_+_56719782_56719963	0.0640738	NKX2-2	ENST00000381295.2|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000346134.7|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000349598.6|EXOC1|ENSG00000090989.13|exocyst complex component 1
hg19_v2_chr13_-_61989655_61989655	0.063948	NKX2-2	ENST00000409204.4|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr12_-_71551652_71551679	0.0639118	NKX2-2	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr2_+_201994208_201994226	0.0633425	NKX2-2	ENST00000440180.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr5_+_56205878_56205932	0.0627856	NKX2-2	ENST00000423328.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr19_-_14889349_14889381	0.061904	NKX2-2	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr17_-_43339474_43339483	0.061059	NKX2-2	ENST00000331780.4|SPATA32|ENSG00000184361.8|spermatogenesis associated 32
hg19_v2_chr1_+_158901329_158901366	0.0600153	NKX2-2	ENST00000368140.1|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000368138.3|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000392254.2|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000392252.3|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1 	ENST00000368135.4|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1
hg19_v2_chr1_-_169429690_169429743	0.0594935	NKX2-2	ENST00000445428.1|RP1-206D15.3|ENSG00000234437.1|RP1-206D15.3
hg19_v2_chr7_+_93535817_93535822	0.0575101	NKX2-2	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr10_+_63808970_63808990	0.057372	NKX2-2	ENST00000309334.5|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr2_-_24270217_24270232	0.0568197	NKX2-2	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr1_+_104068312_104068379	0.0566618	NKX2-2	ENST00000524631.1|RNPC3|ENSG00000185946.11|RNA-binding region (RNP1, RRM) containing 3 	ENST00000531883.1|RNPC3|ENSG00000185946.11|RNA-binding region (RNP1, RRM) containing 3 	ENST00000533099.1|RNPC3|ENSG00000185946.11|RNA-binding region (RNP1, RRM) containing 3 	ENST00000527062.1|RNPC3|ENSG00000185946.11|RNA-binding region (RNP1, RRM) containing 3
hg19_v2_chrM_+_4431_4475	0.0563108	NKX2-2	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr12_-_111926342_111926416	0.0560127	NKX2-2	ENST00000389154.3|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr11_+_22689648_22689665	0.0559384	NKX2-2	ENST00000278187.3|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr2_-_163008903_163008914	0.0551443	NKX2-2	ENST00000418842.2|GCG|ENSG00000115263.10|glucagon 	ENST00000375497.3|GCG|ENSG00000115263.10|glucagon
hg19_v2_chr2_-_55276320_55276334	0.054597	NKX2-2	ENST00000357376.3|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr12_-_4488872_4488894	0.0530261	NKX2-2	ENST00000237837.1|FGF23|ENSG00000118972.1|fibroblast growth factor 23
hg19_v2_chr14_+_94547628_94547661	0.052859	NKX2-2	ENST00000555523.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr14_+_94547675_94547742	0.0528078	NKX2-2	ENST00000393115.3|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554166.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000556381.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000553664.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000555341.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557218.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554544.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557066.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr5_+_148206156_148206201	0.0525853	NKX2-2	ENST00000305988.4|ADRB2|ENSG00000169252.4|adrenoceptor beta 2, surface
hg19_v2_chr9_-_39239171_39239171	0.051962	NKX2-2	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr7_+_32535060_32535322	0.0519537	NKX2-2	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr9_+_37753795_37753820	0.0506088	NKX2-2	ENST00000377753.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000537911.1|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000377754.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000297994.3|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae)
hg19_v2_chr22_+_42086547_42086547	0.050575	NKX2-2	ENST00000402966.1|C22orf46|ENSG00000184208.10|chromosome 22 open reading frame 46
hg19_v2_chr16_+_30212378_30212378	0.0500072	NKX2-2	ENST00000569485.1|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
hg19_v2_chr1_-_202936394_202936408	0.0496455	NKX2-2	ENST00000367249.4|CYB5R1|ENSG00000159348.8|cytochrome b5 reductase 1
hg19_v2_chr6_+_55039050_55039050	0.0495969	NKX2-2	ENST00000370862.3|HCRTR2|ENSG00000137252.5|hypocretin (orexin) receptor 2
hg19_v2_chr19_-_17366257_17366257	0.0490348	NKX2-2	ENST00000594059.1|AC010646.3|ENSG00000269095.1|Uncharacterized protein
hg19_v2_chr21_+_30968360_30968360	0.0485294	NKX2-2	ENST00000333765.4|GRIK1-AS2|ENSG00000183653.4|GRIK1 antisense RNA 2
hg19_v2_chr7_-_99149715_99149757	0.0473792	NKX2-2	ENST00000449309.1|FAM200A|ENSG00000221909.2|family with sequence similarity 200, member A
hg19_v2_chr5_-_148033726_148033741	0.047196	NKX2-2	ENST00000354217.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000314512.6|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000362016.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr19_-_44174330_44174502	0.0465874	NKX2-2	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr15_+_54305101_54305101	0.0455401	NKX2-2	ENST00000260323.11|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000545554.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000537900.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr17_-_15469590_15469590	0.0452697	NKX2-2	ENST00000312127.2|CDRT1|ENSG00000181464.2|CMT duplicated region transcript 1; Uncharacterized protein
hg19_v2_chr9_-_97356075_97356088	0.0452064	NKX2-2	ENST00000375337.3|FBP2|ENSG00000130957.4|fructose-1,6-bisphosphatase 2
hg19_v2_chr6_-_150067632_150067693	0.0450459	NKX2-2	ENST00000460354.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367404.4|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000543637.1|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr1_-_213188772_213188856	0.0447475	NKX2-2	ENST00000544555.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr4_+_158493642_158493770	0.0445222	NKX2-2	ENST00000507108.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000455598.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000509450.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1
hg19_v2_chr17_+_48823975_48824003	0.044196	NKX2-2	ENST00000513969.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000503728.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr2_+_113299990_113300077	0.0439166	NKX2-2	ENST00000537335.1|POLR1B|ENSG00000125630.11|polymerase (RNA) I polypeptide B, 128kDa 	ENST00000417433.2|POLR1B|ENSG00000125630.11|polymerase (RNA) I polypeptide B, 128kDa
hg19_v2_chr5_-_139937895_139937895	0.0435283	NKX2-2	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr5_-_98262240_98262240	0.0432523	NKX2-2	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr9_+_125132803_125132835	0.0432038	NKX2-2	ENST00000540753.1|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr3_+_183770835_183770835	0.0416848	NKX2-2	ENST00000318351.1|HTR3C|ENSG00000178084.1|5-hydroxytryptamine (serotonin) receptor 3C, ionotropic
hg19_v2_chr5_-_148033693_148033716	0.0414347	NKX2-2	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr6_+_152130240_152130274	0.0413347	NKX2-2	ENST00000427531.2|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr6_+_158957431_158957468	0.0397966	NKX2-2	ENST00000367090.3|TMEM181|ENSG00000146433.8|transmembrane protein 181
hg19_v2_chr8_+_11660120_11660221	0.0395783	NKX2-2	ENST00000220584.4|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr10_+_13628933_13629012	0.0395512	NKX2-2	ENST00000417658.1|PRPF18|ENSG00000165630.9|pre-mRNA processing factor 18 	ENST00000320054.4|PRPF18|ENSG00000165630.9|pre-mRNA processing factor 18
hg19_v2_chrX_-_19988382_19988416	0.0394148	NKX2-2	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr13_-_33112899_33112948	0.0384033	NKX2-2	ENST00000267068.3|N4BP2L2|ENSG00000244754.4|NEDD4 binding protein 2-like 2 	ENST00000357505.6|N4BP2L2|ENSG00000244754.4|NEDD4 binding protein 2-like 2 	ENST00000399396.3|N4BP2L2|ENSG00000244754.4|NEDD4 binding protein 2-like 2
hg19_v2_chr2_+_79347577_79347592	0.0378753	NKX2-2	ENST00000233735.1|REG1A|ENSG00000115386.5|regenerating islet-derived 1 alpha
hg19_v2_chr6_-_26027480_26027522	0.037874	NKX2-2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr12_-_68696652_68696661	0.037076	NKX2-2	ENST00000539972.1|MDM1|ENSG00000111554.10|Mdm1 nuclear protein homolog (mouse)
hg19_v2_chr7_+_72742178_72742363	0.0370347	NKX2-2	ENST00000442793.1|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000413573.2|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000252037.4|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa
hg19_v2_chr1_+_84630053_84630077	0.0368732	NKX2-2	ENST00000394838.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000370682.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000432111.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr5_-_11589131_11589169	0.0364516	NKX2-2	ENST00000511377.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr20_-_41818373_41818527	0.0364444	NKX2-2	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr3_-_69101413_69101457	0.0362928	NKX2-2	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr4_+_41937131_41937211	0.0359692	NKX2-2	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr10_-_14504093_14504156	0.035621	NKX2-2	ENST00000493380.1|FRMD4A|ENSG00000151474.15|FERM domain containing 4A 	ENST00000475141.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chrX_-_39186610_39186621	0.0352279	NKX2-2	ENST00000429281.1|RP11-265P11.2|ENSG00000235304.1|RP11-265P11.2	ENST00000448597.1|RP11-265P11.2|ENSG00000235304.1|RP11-265P11.2
hg19_v2_chr14_-_77495007_77495093	0.0351831	NKX2-2	ENST00000238647.3|IRF2BPL|ENSG00000119669.3|interferon regulatory factor 2 binding protein-like
hg19_v2_chr8_+_11666649_11666765	0.0350924	NKX2-2	ENST00000528643.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525777.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chrX_-_23761317_23761419	0.0349795	NKX2-2	ENST00000492081.1|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000379303.5|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000336430.7|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9
hg19_v2_chr14_-_100841930_100842081	0.0348154	NKX2-2	ENST00000555031.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000553395.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000553545.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000344102.5|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000556338.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000392882.2|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000553934.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase
hg19_v2_chr2_-_203735484_203735539	0.0347569	NKX2-2	ENST00000420558.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000418208.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr15_+_100348193_100348193	0.0345032	NKX2-2	ENST00000558188.1|CTD-2054N24.2|ENSG00000259363.1|Uncharacterized protein
hg19_v2_chr10_+_81601114_81601114	0.0338278	NKX2-2	ENST00000602967.1|NUTM2E|ENSG00000228570.3|NUT family member 2E 	ENST00000429984.3|NUTM2E|ENSG00000228570.3|NUT family member 2E
hg19_v2_chr11_-_26743546_26743571	0.0332763	NKX2-2	ENST00000280467.6|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 	ENST00000396005.3|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
hg19_v2_chr19_-_51845378_51845409	0.0329809	NKX2-2	ENST00000335624.4|VSIG10L|ENSG00000186806.5|V-set and immunoglobulin domain containing 10 like
hg19_v2_chr2_-_145275211_145275220	0.0328393	NKX2-2	ENST00000462355.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr3_+_152017181_152017229	0.0322864	NKX2-2	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr8_+_11660227_11660306	0.0322149	NKX2-2	ENST00000443614.2|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525900.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr13_-_20357057_20357105	0.0318692	NKX2-2	ENST00000338910.4|PSPC1|ENSG00000121390.13|paraspeckle component 1
hg19_v2_chr6_-_150067696_150067814	0.0314928	NKX2-2	ENST00000340413.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367403.3|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr14_-_89878369_89878496	0.0313555	NKX2-2	ENST00000553840.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000556916.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr12_+_100750846_100750861	0.0312307	NKX2-2	ENST00000323346.5|SLC17A8|ENSG00000179520.6|solute carrier family 17 (vesicular glutamate transporter), member 8
hg19_v2_chr8_+_94767109_94767161	0.0306515	NKX2-2	ENST00000409623.3|TMEM67|ENSG00000164953.11|transmembrane protein 67 	ENST00000453906.1|TMEM67|ENSG00000164953.11|transmembrane protein 67 	ENST00000521517.1|TMEM67|ENSG00000164953.11|transmembrane protein 67
hg19_v2_chr3_+_88188254_88188254	0.0303145	NKX2-2	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr20_-_55841398_55841458	0.0290473	NKX2-2	ENST00000395864.3|BMP7|ENSG00000101144.8|bone morphogenetic protein 7
hg19_v2_chr3_+_38206975_38207101	0.0287194	NKX2-2	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr22_-_39268308_39268319	0.028561	NKX2-2	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr2_-_203735586_203735769	0.0279593	NKX2-2	ENST00000454326.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000432273.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000450143.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000411681.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr4_+_87928140_87928165	0.027855	NKX2-2	ENST00000307808.6|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr17_+_7591747_7591809	0.0278364	NKX2-2	ENST00000534050.1|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr5_-_179047881_179047960	0.0272655	NKX2-2	ENST00000521173.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr3_+_101280677_101280885	0.0267833	NKX2-2	ENST00000309922.6|TRMT10C|ENSG00000174173.6|tRNA methyltransferase 10 homolog C (S. cerevisiae) 	ENST00000495642.1|TRMT10C|ENSG00000174173.6|tRNA methyltransferase 10 homolog C (S. cerevisiae)
hg19_v2_chr17_+_53342311_53342400	0.0267385	NKX2-2	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr2_-_25391772_25391821	0.0264932	NKX2-2	ENST00000405623.1|POMC|ENSG00000115138.6|proopiomelanocortin
hg19_v2_chr14_+_39734482_39734542	0.0261816	NKX2-2	ENST00000554392.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000555716.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000341749.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000557038.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr12_+_14572070_14572164	0.0256172	NKX2-2	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr1_-_207095212_207095278	0.0256123	NKX2-2	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr11_-_107729887_107729927	0.025221	NKX2-2	ENST00000525815.1|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr8_-_18666360_18666410	0.0247747	NKX2-2	ENST00000286485.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr1_+_104068562_104068632	0.0243753	NKX2-2	ENST00000423855.2|RNPC3|ENSG00000185946.11|RNA-binding region (RNP1, RRM) containing 3
hg19_v2_chr13_-_20357110_20357142	0.0241324	NKX2-2	ENST00000427943.1|PSPC1|ENSG00000121390.13|paraspeckle component 1
hg19_v2_chr7_+_93535866_93535906	0.0241245	NKX2-2	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr2_-_27558270_27558295	0.0238551	NKX2-2	ENST00000454704.1|GTF3C2|ENSG00000115207.9|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v2_chr9_-_85882145_85882202	0.023541	NKX2-2	ENST00000328788.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr2_-_151344172_151344243	0.0234976	NKX2-2	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr13_-_103719196_103719196	0.0233513	NKX2-2	ENST00000245312.3|SLC10A2|ENSG00000125255.5|solute carrier family 10 (sodium/bile acid cotransporter), member 2
hg19_v2_chr10_+_90346519_90346519	0.0233475	NKX2-2	ENST00000371939.3|LIPJ|ENSG00000204022.5|lipase, family member J
hg19_v2_chr3_+_75713481_75713481	0.0232557	NKX2-2	ENST00000308062.3|FRG2C|ENSG00000172969.3|FSHD region gene 2 family, member C 	ENST00000464571.1|FRG2C|ENSG00000172969.3|FSHD region gene 2 family, member C
hg19_v2_chr14_+_39703084_39703110	0.0232482	NKX2-2	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr3_+_108541545_108541569	0.0227633	NKX2-2	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr5_-_126409159_126409200	0.0226925	NKX2-2	ENST00000607731.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000535381.1|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000296662.5|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63 	ENST00000509733.3|C5orf63|ENSG00000164241.9|chromosome 5 open reading frame 63
hg19_v2_chr10_-_61513146_61513157	0.0225946	NKX2-2	ENST00000430431.1|LINC00948|ENSG00000227877.2|long intergenic non-protein coding RNA 948
hg19_v2_chrX_-_15333775_15333780	0.0225443	NKX2-2	ENST00000480796.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr3_-_114790179_114790222	0.0222672	NKX2-2	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr2_+_120301997_120302038	0.0218052	NKX2-2	ENST00000602047.1|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1
hg19_v2_chr5_-_58652788_58652840	0.0217136	NKX2-2	ENST00000405755.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chrX_+_11777671_11777795	0.0216384	NKX2-2	ENST00000380693.3|MSL3|ENSG00000005302.13|male-specific lethal 3 homolog (Drosophila) 	ENST00000380692.2|MSL3|ENSG00000005302.13|male-specific lethal 3 homolog (Drosophila)
hg19_v2_chr9_-_86593238_86593367	0.0215076	NKX2-2	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr12_+_510795_510835	0.0213303	NKX2-2	ENST00000412006.2|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr10_+_81462983_81463035	0.0210426	NKX2-2	ENST00000448135.1|NUTM2B|ENSG00000188199.6|NUT family member 2B 	ENST00000429828.1|NUTM2B|ENSG00000188199.6|NUT family member 2B 	ENST00000372321.1|NUTM2B|ENSG00000188199.6|NUT family member 2B
hg19_v2_chr5_+_118812294_118812324	0.0205425	NKX2-2	ENST00000509514.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr9_+_92219919_92219953	0.0205282	NKX2-2	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr2_+_162087577_162087697	0.0204628	NKX2-2	ENST00000439442.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chrX_-_15333736_15333767	0.0202218	NKX2-2	ENST00000380470.3|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr12_+_510742_510782	0.0187356	NKX2-2	ENST00000239830.4|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr13_+_25875785_25875808	0.0182522	NKX2-2	ENST00000381747.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr15_+_42841008_42841061	0.0181659	NKX2-2	ENST00000260372.3|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000568876.1|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000568846.2|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000562398.1|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2
hg19_v2_chr12_+_57998400_57998422	0.018006	NKX2-2	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr6_+_32936353_32936437	0.017651	NKX2-2	ENST00000374825.4|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr2_+_102953608_102953727	0.0176083	NKX2-2	ENST00000311734.2|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1 	ENST00000409584.1|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1
hg19_v2_chr10_+_73156664_73156716	0.017314	NKX2-2	ENST00000398809.4|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000398842.3|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000461841.3|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000299366.7|CDH23|ENSG00000107736.15|cadherin-related 23
hg19_v2_chr16_+_10837643_10837714	0.0173119	NKX2-2	ENST00000574334.1|NUBP1|ENSG00000103274.6|nucleotide binding protein 1 	ENST00000283027.5|NUBP1|ENSG00000103274.6|nucleotide binding protein 1 	ENST00000433392.2|NUBP1|ENSG00000103274.6|nucleotide binding protein 1
hg19_v2_chr17_+_74372662_74372742	0.0169456	NKX2-2	ENST00000591651.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1 	ENST00000545180.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1
hg19_v2_chr2_-_27362263_27362283	0.016878	NKX2-2	ENST00000432962.1|C2orf53|ENSG00000186143.6|chromosome 2 open reading frame 53 	ENST00000335524.3|C2orf53|ENSG00000186143.6|chromosome 2 open reading frame 53
hg19_v2_chr14_-_100841670_100841692	0.0168696	NKX2-2	ENST00000557297.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000555813.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000557135.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000556698.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000554509.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase 	ENST00000555410.1|WARS|ENSG00000140105.13|tryptophanyl-tRNA synthetase
hg19_v2_chr17_+_18647326_18647388	0.0164229	NKX2-2	ENST00000395667.1|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000395665.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000308799.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000301938.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10
hg19_v2_chr17_+_38171614_38171635	0.0160609	NKX2-2	ENST00000583218.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394149.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr16_-_1464688_1464752	0.0158955	NKX2-2	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr10_-_61513201_61513219	0.0157175	NKX2-2	ENST00000414264.1|LINC00948|ENSG00000227877.2|long intergenic non-protein coding RNA 948 	ENST00000594536.1|LINC00948|ENSG00000227877.2|long intergenic non-protein coding RNA 948
hg19_v2_chr9_-_98079965_98080008	0.015134	NKX2-2	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr19_+_47634039_47634157	0.0150895	NKX2-2	ENST00000597808.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000413379.3|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000600706.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000540850.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000598840.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000600753.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000270225.7|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000392776.3|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1
hg19_v2_chr14_+_22948510_22948510	0.0148251	NKX2-2	ENST00000390483.1|TRAJ56|ENSG00000211835.1|T cell receptor alpha joining 56
hg19_v2_chr3_-_123339418_123339473	0.0147676	NKX2-2	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr5_+_118812237_118812251	0.0143055	NKX2-2	ENST00000513628.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr7_-_130080977_130081078	0.0138661	NKX2-2	ENST00000223208.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr19_+_58193388_58193413	0.0129223	NKX2-2	ENST00000596085.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000594684.1|AC003006.7|ENSG00000269026.2|Uncharacterized protein
hg19_v2_chr17_-_72358001_72358085	0.0127979	NKX2-2	ENST00000375366.3|BTBD17|ENSG00000204347.3|BTB (POZ) domain containing 17
hg19_v2_chr17_+_38171681_38171740	0.0127944	NKX2-2	ENST00000225474.2|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000331769.2|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394148.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000577675.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr6_+_20534672_20534745	0.0122906	NKX2-2	ENST00000274695.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1 	ENST00000378624.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1
hg19_v2_chr6_+_32121218_32121354	0.0119319	NKX2-2	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr10_+_13628921_13628928	0.0119306	NKX2-2	ENST00000378572.3|PRPF18|ENSG00000165630.9|pre-mRNA processing factor 18
hg19_v2_chr7_-_122339162_122339210	0.0117914	NKX2-2	ENST00000340112.2|RNF133|ENSG00000188050.2|ring finger protein 133
hg19_v2_chr4_-_140477928_140477990	0.011791	NKX2-2	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr3_+_183892635_183892737	0.0115952	NKX2-2	ENST00000427072.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000411763.2|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000292807.5|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000448139.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000455925.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit
hg19_v2_chr2_+_192543153_192543258	0.0115683	NKX2-2	ENST00000425611.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr6_+_158733692_158733692	0.0114925	NKX2-2	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr1_+_180601139_180601180	0.0110476	NKX2-2	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr2_-_197226875_197226946	0.010811	NKX2-2	ENST00000409111.1|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr1_+_202431859_202431871	0.0106843	NKX2-2	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr5_+_159848854_159848917	0.0105672	NKX2-2	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr11_+_9406169_9406210	0.0103129	NKX2-2	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr20_-_55841662_55841736	0.00935107	NKX2-2	ENST00000395863.3|BMP7|ENSG00000101144.8|bone morphogenetic protein 7 	ENST00000450594.2|BMP7|ENSG00000101144.8|bone morphogenetic protein 7
hg19_v2_chr9_+_123970052_123970086	0.00915748	NKX2-2	ENST00000373823.3|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr10_+_35456444_35456498	0.00906932	NKX2-2	ENST00000361599.4|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr3_-_33686743_33686807	0.00903997	NKX2-2	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr5_-_58571935_58571951	0.00875539	NKX2-2	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr2_-_25565377_25565459	0.00864101	NKX2-2	ENST00000264709.3|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000406659.3|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr12_-_70093111_70093156	0.00850166	NKX2-2	ENST00000548658.1|BEST3|ENSG00000127325.14|bestrophin 3 	ENST00000476098.1|BEST3|ENSG00000127325.14|bestrophin 3 	ENST00000331471.4|BEST3|ENSG00000127325.14|bestrophin 3 	ENST00000393365.1|BEST3|ENSG00000127325.14|bestrophin 3
hg19_v2_chr5_+_156887027_156887059	0.00840031	NKX2-2	ENST00000435489.2|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4 	ENST00000311946.7|NIPAL4|ENSG00000172548.10|NIPA-like domain containing 4
hg19_v2_chr1_-_109399682_109399721	0.00792069	NKX2-2	ENST00000369995.3|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000370001.3|AKNAD1|ENSG00000162641.14|AKNA domain containing 1
hg19_v2_chr8_+_92261516_92261555	0.0073219	NKX2-2	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr5_+_140552218_140552244	0.00710486	NKX2-2	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chrX_+_49091920_49091942	0.00702556	NKX2-2	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr5_-_43557791_43557860	0.00660942	NKX2-2	ENST00000338972.4|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000511321.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1 	ENST00000515338.1|PAIP1|ENSG00000172239.9|poly(A) binding protein interacting protein 1
hg19_v2_chr17_+_7591639_7591672	0.0063948	NKX2-2	ENST00000396463.2|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr11_+_64949899_64949941	0.0061743	NKX2-2	ENST00000531068.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527699.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000533909.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527323.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr8_-_95220775_95220820	0.00597282	NKX2-2	ENST00000441892.2|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine) 	ENST00000521491.1|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine) 	ENST00000027335.3|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine)
hg19_v2_chr1_-_115259337_115259515	0.00566628	NKX2-2	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr3_+_179280668_179280769	0.00563092	NKX2-2	ENST00000429709.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000450518.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000392662.1|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000490364.1|ACTL6A|ENSG00000136518.12|actin-like 6A
hg19_v2_chr1_-_26633067_26633145	0.00536218	NKX2-2	ENST00000421827.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374215.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374223.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000357089.4|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000535108.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000314675.7|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000436301.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000423664.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374221.3|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chr8_+_110552337_110552423	0.00504816	NKX2-2	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chrX_-_49121165_49121288	0.00489604	NKX2-2	ENST00000376207.4|FOXP3|ENSG00000049768.10|forkhead box P3 	ENST00000376199.2|FOXP3|ENSG00000049768.10|forkhead box P3
hg19_v2_chr14_-_25078864_25078905	0.00465445	NKX2-2	ENST00000216338.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000557220.2|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000382548.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX)
hg19_v2_chr3_-_123339343_123339401	0.00437543	NKX2-2	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr1_-_223308098_223308225	0.00430179	NKX2-2	ENST00000342210.6|TLR5|ENSG00000187554.7|toll-like receptor 5
hg19_v2_chr2_-_183387283_183387304	0.00428872	NKX2-2	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr2_-_183387064_183387129	0.00425092	NKX2-2	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr6_+_44355257_44355315	0.00414922	NKX2-2	ENST00000371477.3|CDC5L|ENSG00000096401.7|cell division cycle 5-like
hg19_v2_chr12_+_101869096_101869199	0.00391371	NKX2-2	ENST00000551346.1|SPIC|ENSG00000166211.6|Spi-C transcription factor (Spi-1/PU.1 related)
hg19_v2_chr5_+_159848807_159848847	0.00381814	NKX2-2	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr1_+_50459990_50459990	0.00342208	NKX2-2	ENST00000448346.1|AL645730.2|ENSG00000227839.1|AL645730.2
hg19_v2_chr3_-_167191814_167191842	0.0028455	NKX2-2	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr19_+_39138320_39138378	0.00275486	NKX2-2	ENST00000424234.2|ACTN4|ENSG00000130402.7|actinin, alpha 4 	ENST00000390009.3|ACTN4|ENSG00000130402.7|actinin, alpha 4 	ENST00000589528.1|ACTN4|ENSG00000130402.7|actinin, alpha 4
hg19_v2_chr7_+_23719749_23719834	0.00242355	NKX2-2	ENST00000409192.3|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000344962.4|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000409653.1|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000409994.3|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A
hg19_v2_chr6_+_45296048_45296106	0.00238563	NKX2-2	ENST00000465038.2|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000352853.5|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000541979.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000371438.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr18_+_43684310_43684373	0.00237968	NKX2-2	ENST00000592471.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1 	ENST00000585518.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr20_+_13765596_13765745	0.00236761	NKX2-2	ENST00000378106.5|NDUFAF5|ENSG00000101247.13|NADH dehydrogenase (ubiquinone) complex I, assembly factor 5 	ENST00000463598.1|NDUFAF5|ENSG00000101247.13|NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
hg19_v2_chr9_+_91926103_91926119	0.00166709	NKX2-2	ENST00000314355.6|CKS2|ENSG00000123975.4|CDC28 protein kinase regulatory subunit 2
hg19_v2_chr8_+_118147498_118147567	0.0011859	NKX2-2	ENST00000519688.1|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8 	ENST00000456015.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr14_+_22580233_22580313	0.00114544	NKX2-2	ENST00000390454.2|TRAV25|ENSG00000211806.2|T cell receptor alpha variable 25
hg19_v2_chr17_-_3496171_3496171	0.000919025	NKX2-2	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr22_-_36220420_36220447	0.000886662	NKX2-2	ENST00000473487.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr10_+_97759848_97759883	0.000874214	NKX2-2	ENST00000424464.1|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000410012.2|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000344386.3|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B
hg19_v2_chr12_-_371994_372039	0.000544227	NKX2-2	ENST00000343164.4|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000436453.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000445055.2|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000546319.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13
hg19_v2_chr20_+_30697510_30697547	0.000252843	NKX2-2	ENST00000217315.5|TM9SF4|ENSG00000101337.11|transmembrane 9 superfamily protein member 4
hg19_v2_chr2_-_183387430_183387465	0.000177459	NKX2-2	ENST00000410103.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
