hg19_v2_chr4_-_100242549_100242564	0.567967	NKX2-3	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr4_-_140201333_140201492	0.314243	NKX2-3	ENST00000398955.1|MGARP|ENSG00000137463.4|mitochondria-localized glutamic acid-rich protein
hg19_v2_chr19_+_45409011_45409069	0.293869	NKX2-3	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr9_-_95166841_95166867	0.256748	NKX2-3	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr9_-_95166884_95166908	0.252521	NKX2-3	ENST00000375561.5|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr12_-_108714412_108714446	0.211842	NKX2-3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chr3_-_114790179_114790222	0.20326	NKX2-3	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr6_+_73076432_73076455	0.177769	NKX2-3	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr16_-_66952742_66952774	0.17234	NKX2-3	ENST00000565235.2|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000568632.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000565796.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin
hg19_v2_chr16_-_66952779_66952887	0.171652	NKX2-3	ENST00000570262.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000394055.3|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000299752.4|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin
hg19_v2_chr19_-_1401486_1401570	0.165638	NKX2-3	ENST00000252288.2|GAMT|ENSG00000130005.7|guanidinoacetate N-methyltransferase 	ENST00000447102.3|GAMT|ENSG00000130005.7|guanidinoacetate N-methyltransferase
hg19_v2_chr17_-_76870126_76870201	0.162744	NKX2-3	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr17_-_76870222_76870242	0.159466	NKX2-3	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr12_+_71833550_71833588	0.156311	NKX2-3	ENST00000266674.5|LGR5|ENSG00000139292.8|leucine-rich repeat containing G protein-coupled receptor 5
hg19_v2_chr2_-_38303218_38303323	0.155991	NKX2-3	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr5_+_156693091_156693150	0.152871	NKX2-3	ENST00000318218.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000442283.2|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000522463.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000521420.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr4_-_57524061_57524074	0.1523	NKX2-3	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr9_+_36036430_36036430	0.140897	NKX2-3	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr5_+_149569520_149569689	0.137248	NKX2-3	ENST00000230671.2|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7 	ENST00000524041.1|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7
hg19_v2_chr1_+_26147319_26147338	0.135939	NKX2-3	ENST00000374300.3|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like
hg19_v2_chr14_+_45366518_45366552	0.131498	NKX2-3	ENST00000557112.1|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr7_-_150974494_150974538	0.131228	NKX2-3	ENST00000392811.2|SMARCD3|ENSG00000082014.12|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
hg19_v2_chr16_+_32264040_32264040	0.124243	NKX2-3	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr16_-_32688053_32688053	0.122851	NKX2-3	ENST00000398682.4|TP53TG3|ENSG00000183632.10|TP53 target 3
hg19_v2_chr8_-_93029865_93029904	0.122291	NKX2-3	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr10_-_70092671_70092806	0.120641	NKX2-3	ENST00000358769.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000432941.1|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000495025.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chr1_-_79472365_79472443	0.116748	NKX2-3	ENST00000370742.3|ELTD1|ENSG00000162618.8|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v2_chr6_+_69942298_69942394	0.115203	NKX2-3	ENST00000238918.8|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr15_+_33022885_33022907	0.112477	NKX2-3	ENST00000322805.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr4_-_84035905_84035955	0.110016	NKX2-3	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr11_+_62379194_62379310	0.108571	NKX2-3	ENST00000525801.1|ROM1|ENSG00000149489.4|retinal outer segment membrane protein 1 	ENST00000534093.1|ROM1|ENSG00000149489.4|retinal outer segment membrane protein 1
hg19_v2_chr2_+_161993465_161993481	0.105993	NKX2-3	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_-_188419200_188419224	0.104208	NKX2-3	ENST00000233156.3|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000426055.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000453013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000417013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v2_chr17_-_26662464_26662519	0.103927	NKX2-3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr4_-_84035868_84035897	0.102315	NKX2-3	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr11_+_65266507_65266522	0.101771	NKX2-3	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr3_+_108541545_108541569	0.101084	NKX2-3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr12_+_56546363_56546397	0.0978023	NKX2-3	ENST00000551834.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000552568.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr9_+_118950325_118950452	0.0946392	NKX2-3	ENST00000534838.1|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr4_-_100212132_100212185	0.0945799	NKX2-3	ENST00000209668.2|ADH1A|ENSG00000187758.3|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v2_chr7_+_141463897_141463897	0.0937113	NKX2-3	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr12_+_56546223_56546361	0.0924175	NKX2-3	ENST00000550443.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000207437.5|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr6_-_150212029_150212170	0.0923805	NKX2-3	ENST00000529948.1|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000357183.4|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000367363.3|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E
hg19_v2_chr12_+_10460549_10460585	0.092331	NKX2-3	ENST00000543420.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000543777.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr13_-_50018140_50018221	0.0911219	NKX2-3	ENST00000410043.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000347776.5|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr17_-_8059638_8059723	0.0893484	NKX2-3	ENST00000584202.1|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000354903.5|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000577253.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr1_-_85870177_85870208	0.0883702	NKX2-3	ENST00000542148.1|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr20_+_32250079_32250090	0.0875407	NKX2-3	ENST00000375222.3|C20orf144|ENSG00000149609.5|chromosome 20 open reading frame 144
hg19_v2_chr1_+_38273419_38273433	0.0856161	NKX2-3	ENST00000468084.1|C1orf122|ENSG00000197982.12|chromosome 1 open reading frame 122
hg19_v2_chr13_-_50018241_50018277	0.0847768	NKX2-3	ENST00000409308.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr17_-_26662440_26662463	0.0836318	NKX2-3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr19_-_18433910_18434084	0.0835729	NKX2-3	ENST00000594828.3|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000593829.1|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr3_-_122134882_122134951	0.0825881	NKX2-3	ENST00000330689.4|WDR5B|ENSG00000196981.2|WD repeat domain 5B
hg19_v2_chr11_+_63998006_63998044	0.0814329	NKX2-3	ENST00000355040.4|DNAJC4|ENSG00000110011.9|DnaJ (Hsp40) homolog, subfamily C, member 4
hg19_v2_chr9_-_138391692_138391741	0.0798942	NKX2-3	ENST00000429260.2|C9orf116|ENSG00000160345.8|chromosome 9 open reading frame 116
hg19_v2_chr7_-_80548667_80548688	0.079832	NKX2-3	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr1_+_205682497_205682497	0.0784092	NKX2-3	ENST00000598338.1|AC119673.1|ENSG00000268313.1|AC119673.1
hg19_v2_chr18_-_25616519_25616549	0.0773936	NKX2-3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chrX_-_69509738_69509829	0.0757204	NKX2-3	ENST00000374454.1|PDZD11|ENSG00000120509.6|PDZ domain containing 11 	ENST00000239666.4|PDZD11|ENSG00000120509.6|PDZ domain containing 11
hg19_v2_chr6_+_46761118_46761132	0.0746959	NKX2-3	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr20_-_31071309_31071385	0.0735881	NKX2-3	ENST00000326071.4|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr11_+_120195992_120196023	0.0731362	NKX2-3	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr8_+_134125727_134125747	0.073047	NKX2-3	ENST00000521107.1|TG|ENSG00000042832.7|thyroglobulin
hg19_v2_chr15_-_50558223_50558263	0.0722359	NKX2-3	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr12_+_111051832_111051873	0.0718812	NKX2-3	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr4_-_104021009_104021042	0.0710176	NKX2-3	ENST00000509245.1|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2 	ENST00000296424.4|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2
hg19_v2_chr2_-_188419078_188419195	0.0703421	NKX2-3	ENST00000437725.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000409676.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000339091.4|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000420747.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v2_chr13_+_31506818_31506853	0.0697379	NKX2-3	ENST00000380473.3|TEX26|ENSG00000175664.5|testis expressed 26
hg19_v2_chr8_+_28196157_28196204	0.0686042	NKX2-3	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr1_-_46642154_46642174	0.0673171	NKX2-3	ENST00000540385.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr19_+_17622415_17622481	0.0662815	NKX2-3	ENST00000252603.2|PGLS|ENSG00000130313.2|6-phosphogluconolactonase 	ENST00000600923.1|PGLS|ENSG00000130313.2|6-phosphogluconolactonase
hg19_v2_chr8_+_24298531_24298551	0.0642901	NKX2-3	ENST00000175238.6|ADAM7|ENSG00000069206.11|ADAM metallopeptidase domain 7
hg19_v2_chr14_+_94547675_94547742	0.0638494	NKX2-3	ENST00000393115.3|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554166.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000556381.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000553664.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000555341.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557218.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554544.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557066.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr8_+_24298597_24298612	0.0637079	NKX2-3	ENST00000380789.1|ADAM7|ENSG00000069206.11|ADAM metallopeptidase domain 7
hg19_v2_chr4_-_90758118_90758150	0.0625859	NKX2-3	ENST00000420646.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_-_89488510_89488565	0.0619471	NKX2-3	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr3_+_98482175_98482197	0.0616885	NKX2-3	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr14_+_100531615_100531705	0.0615326	NKX2-3	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr5_+_112312399_112312414	0.0611321	NKX2-3	ENST00000515408.1|DCP2|ENSG00000172795.11|decapping mRNA 2 	ENST00000513585.1|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr14_+_94547628_94547661	0.0598725	NKX2-3	ENST00000555523.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr5_+_49961727_49961740	0.0598207	NKX2-3	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr2_-_180129484_180129574	0.0597327	NKX2-3	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr1_+_202317815_202317854	0.0597297	NKX2-3	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr1_+_54359854_54359884	0.0593479	NKX2-3	ENST00000361921.3|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000322679.6|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000532493.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000525202.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000524406.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000388876.3|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I
hg19_v2_chr19_+_53761545_53761545	0.0586211	NKX2-3	ENST00000341702.3|VN1R2|ENSG00000196131.6|vomeronasal 1 receptor 2
hg19_v2_chr3_+_108541608_108541624	0.0585964	NKX2-3	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr1_+_202431859_202431871	0.058511	NKX2-3	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr5_+_179105615_179105666	0.0579927	NKX2-3	ENST00000514383.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chrX_+_37865804_37865842	0.0579561	NKX2-3	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr5_-_180688105_180688162	0.0578691	NKX2-3	ENST00000327767.4|TRIM52|ENSG00000183718.4|tripartite motif containing 52
hg19_v2_chr15_+_85147127_85147142	0.0569028	NKX2-3	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr20_-_33735070_33735175	0.0568868	NKX2-3	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr14_-_65769392_65769426	0.0564925	NKX2-3	ENST00000555736.1|CTD-2509G16.5|ENSG00000258760.1|CTD-2509G16.5
hg19_v2_chr4_+_76439665_76439730	0.0555879	NKX2-3	ENST00000508105.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000311638.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000380837.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507556.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000504190.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507885.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000502620.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000514480.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr15_+_43477580_43477656	0.0554449	NKX2-3	ENST00000356633.5|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr12_+_111051902_111051975	0.0550855	NKX2-3	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr11_+_12399071_12399185	0.0546861	NKX2-3	ENST00000539723.1|PARVA|ENSG00000197702.7|parvin, alpha 	ENST00000550549.1|PARVA|ENSG00000197702.7|parvin, alpha
hg19_v2_chr7_-_127255724_127255780	0.0546846	NKX2-3	ENST00000463946.1|PAX4|ENSG00000106331.10|paired box 4 	ENST00000341640.2|PAX4|ENSG00000106331.10|paired box 4
hg19_v2_chr9_+_116263778_116263793	0.0546466	NKX2-3	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr7_+_134430212_134430237	0.0526555	NKX2-3	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr12_-_42719885_42719926	0.0525913	NKX2-3	ENST00000552673.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000266529.3|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000552235.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1
hg19_v2_chr1_+_109632425_109632425	0.0523228	NKX2-3	ENST00000338272.8|TMEM167B|ENSG00000215717.5|transmembrane protein 167B
hg19_v2_chr10_-_49813090_49813198	0.05203	NKX2-3	ENST00000249601.4|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr14_-_45252031_45252036	0.0516256	NKX2-3	ENST00000556405.1|RP11-398E10.1|ENSG00000258998.1|RP11-398E10.1
hg19_v2_chr19_-_10341948_10341965	0.051449	NKX2-3	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr16_-_31076332_31076409	0.0511465	NKX2-3	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr3_+_57094469_57094469	0.0509353	NKX2-3	ENST00000334325.1|SPATA12|ENSG00000186451.1|spermatogenesis associated 12
hg19_v2_chr15_+_43477455_43477482	0.050793	NKX2-3	ENST00000300213.4|CCNDBP1|ENSG00000166946.9|cyclin D-type binding-protein 1
hg19_v2_chr2_+_161993412_161993453	0.0499002	NKX2-3	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr3_-_3221358_3221394	0.0496197	NKX2-3	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr20_+_57427765_57427783	0.0495536	NKX2-3	ENST00000371100.4|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr1_-_232598163_232598163	0.0485953	NKX2-3	ENST00000308942.4|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr15_-_78369994_78370069	0.0483554	NKX2-3	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chr12_-_104531945_104531996	0.0482703	NKX2-3	ENST00000551446.1|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr1_-_19746236_19746261	0.0479508	NKX2-3	ENST00000375144.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr16_+_3184924_3185045	0.0479191	NKX2-3	ENST00000574902.1|ZNF213|ENSG00000085644.9|zinc finger protein 213 	ENST00000396878.3|ZNF213|ENSG00000085644.9|zinc finger protein 213
hg19_v2_chr17_-_2966901_2966901	0.0476984	NKX2-3	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr4_-_90758227_90758379	0.0476622	NKX2-3	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr10_+_35464513_35464631	0.0472894	NKX2-3	ENST00000494479.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463314.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000342105.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000495301.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463960.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr5_-_70320941_70320941	0.0471022	NKX2-3	ENST00000523981.1|NAIP|ENSG00000249437.3|NLR family, apoptosis inhibitory protein
hg19_v2_chr19_+_15838834_15838834	0.0467182	NKX2-3	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr9_+_125376948_125376948	0.0466115	NKX2-3	ENST00000297913.2|OR1Q1|ENSG00000165202.2|olfactory receptor, family 1, subfamily Q, member 1
hg19_v2_chr9_+_75229616_75229616	0.0463412	NKX2-3	ENST00000340019.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chrX_-_21776281_21776299	0.0461037	NKX2-3	ENST00000379494.3|SMPX|ENSG00000091482.5|small muscle protein, X-linked
hg19_v2_chr19_-_12946236_12946262	0.0459866	NKX2-3	ENST00000589272.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000393233.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr16_-_31076273_31076290	0.0455031	NKX2-3	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr19_+_36142147_36142211	0.0454643	NKX2-3	ENST00000590618.1|COX6B1|ENSG00000126267.4|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
hg19_v2_chr12_+_123465033_123465075	0.0454227	NKX2-3	ENST00000454885.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr8_+_11961898_11961898	0.0450454	NKX2-3	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chr9_-_115819039_115819082	0.0448123	NKX2-3	ENST00000555206.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr10_-_112678692_112678695	0.0442176	NKX2-3	ENST00000605742.1|BBIP1|ENSG00000214413.3|BBSome interacting protein 1
hg19_v2_chr6_+_32006042_32006084	0.0436206	NKX2-3	ENST00000418967.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr4_-_52883786_52883786	0.0432769	NKX2-3	ENST00000343457.3|LRRC66|ENSG00000188993.3|leucine rich repeat containing 66
hg19_v2_chr1_+_32666188_32666274	0.0426825	NKX2-3	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chrX_+_153029633_153029738	0.0426596	NKX2-3	ENST00000538966.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000361971.5|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538776.1|PLXNB3|ENSG00000198753.7|plexin B3 	ENST00000538543.1|PLXNB3|ENSG00000198753.7|plexin B3
hg19_v2_chr9_-_116840728_116840752	0.0422155	NKX2-3	ENST00000265132.3|AMBP|ENSG00000106927.7|alpha-1-microglobulin/bikunin precursor
hg19_v2_chr20_-_30539773_30539895	0.0419386	NKX2-3	ENST00000202017.4|PDRG1|ENSG00000088356.4|p53 and DNA-damage regulated 1
hg19_v2_chr3_+_10157276_10157377	0.0415076	NKX2-3	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr5_+_150051149_150051323	0.041306	NKX2-3	ENST00000523553.1|MYOZ3|ENSG00000164591.9|myozenin 3
hg19_v2_chr7_-_29186008_29186172	0.0412377	NKX2-3	ENST00000396276.3|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like 	ENST00000265394.5|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like
hg19_v2_chr8_-_49833978_49833996	0.0410248	NKX2-3	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr8_-_49834299_49834446	0.0404562	NKX2-3	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chrX_-_118284542_118284542	0.0404028	NKX2-3	ENST00000402510.2|KIAA1210|ENSG00000250423.2|KIAA1210
hg19_v2_chr5_+_169780485_169780498	0.0403638	NKX2-3	ENST00000377360.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr20_+_60962143_60962172	0.0402076	NKX2-3	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chr12_+_123464607_123464873	0.0397389	NKX2-3	ENST00000543566.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000315580.5|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000542099.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000392435.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000413381.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000426960.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000453766.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr7_-_2883928_2883993	0.0393398	NKX2-3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr7_+_117251671_117251701	0.0387873	NKX2-3	ENST00000468795.1|CFTR|ENSG00000001626.10|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg19_v2_chr18_-_70532906_70532934	0.038604	NKX2-3	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr20_+_33104199_33104260	0.0383299	NKX2-3	ENST00000357156.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000417166.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000300469.9|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000374846.3|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1
hg19_v2_chr2_-_492655_492663	0.0374592	NKX2-3	ENST00000427398.1|AC093326.1|ENSG00000223985.1|AC093326.1
hg19_v2_chr7_-_86849883_86849910	0.0374026	NKX2-3	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr15_+_67841330_67841348	0.0372675	NKX2-3	ENST00000354498.5|MAP2K5|ENSG00000137764.15|mitogen-activated protein kinase kinase 5
hg19_v2_chr16_+_78133293_78133341	0.0370479	NKX2-3	ENST00000566780.1|WWOX|ENSG00000186153.12|WW domain containing oxidoreductase
hg19_v2_chr17_-_29641084_29641103	0.0362133	NKX2-3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr11_+_98891797_98891920	0.0360227	NKX2-3	ENST00000527185.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000528682.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000524871.1|CNTN5|ENSG00000149972.6|contactin 5
hg19_v2_chr17_+_36283971_36284016	0.0358381	NKX2-3	ENST00000327454.6|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F 	ENST00000378174.5|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F
hg19_v2_chr12_-_104532062_104532071	0.0356148	NKX2-3	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr16_+_2031633_2031633	0.0356136	NKX2-3	ENST00000598236.1|AC005606.1|ENSG00000269205.1|LOC283868 protein; Uncharacterized protein
hg19_v2_chr3_-_52002403_52002433	0.0356055	NKX2-3	ENST00000490063.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000468324.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000497653.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000484633.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4
hg19_v2_chr8_-_74791051_74791145	0.0350906	NKX2-3	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr20_-_31071239_31071307	0.0345091	NKX2-3	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chrX_-_134049233_134049258	0.0338229	NKX2-3	ENST00000370779.4|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr2_-_178128528_178128574	0.0333066	NKX2-3	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr17_-_58096336_58096413	0.0330147	NKX2-3	ENST00000587125.1|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene 	ENST00000407042.3|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
hg19_v2_chr12_+_10460417_10460485	0.0325794	NKX2-3	ENST00000381908.3|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000336164.4|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000350274.5|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr7_-_38948774_38948829	0.0323147	NKX2-3	ENST00000395969.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000414632.1|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000310301.4|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr17_-_34808047_34808104	0.031439	NKX2-3	ENST00000592614.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000591542.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000400684.4|TBC1D3H|ENSG00000242384.3|TBC1 domain family, member 3H 	ENST00000330458.7|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000341264.6|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000592987.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G
hg19_v2_chr19_-_12946215_12946230	0.031149	NKX2-3	ENST00000591512.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000587549.1|RTBDN|ENSG00000132026.9|retbindin 	ENST00000322912.5|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr10_-_13523073_13523073	0.031138	NKX2-3	ENST00000440282.1|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr3_+_183892635_183892737	0.0310902	NKX2-3	ENST00000427072.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000411763.2|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000292807.5|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000448139.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000455925.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit
hg19_v2_chr17_+_45286387_45286455	0.0310486	NKX2-3	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr17_+_42264322_42264376	0.0309762	NKX2-3	ENST00000446571.3|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000357984.3|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000538716.2|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr5_-_115177247_115177279	0.0307193	NKX2-3	ENST00000500945.2|ATG12|ENSG00000145782.8|autophagy related 12
hg19_v2_chr19_-_46288917_46288971	0.0304552	NKX2-3	ENST00000537879.1|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000596586.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein  	ENST00000595946.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein
hg19_v2_chr14_+_102276132_102276178	0.0304047	NKX2-3	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr17_+_66521936_66522026	0.0299422	NKX2-3	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr22_+_21213771_21213788	0.0298954	NKX2-3	ENST00000439214.1|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr17_-_36348610_36348666	0.0294897	NKX2-3	ENST00000339023.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3 	ENST00000354664.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3
hg19_v2_chr1_-_165668100_165668100	0.0291615	NKX2-3	ENST00000354775.4|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr21_+_17442799_17442853	0.0287083	NKX2-3	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr14_+_36295504_36295580	0.0285396	NKX2-3	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr19_+_41882598_41882689	0.0282185	NKX2-3	ENST00000447302.2|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000544232.1|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000540732.1|CTC-435M10.3|ENSG00000255730.2|2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; Uncharacterized protein  	ENST00000542945.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr6_-_33285505_33285529	0.0281335	NKX2-3	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr9_-_99382065_99382151	0.0279897	NKX2-3	ENST00000265659.2|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375241.1|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375236.1|CDC14B|ENSG00000081377.12|cell division cycle 14B
hg19_v2_chr6_-_26027480_26027522	0.0278138	NKX2-3	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr10_-_76868931_76868980	0.0272738	NKX2-3	ENST00000372700.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000473072.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000491677.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000607131.1|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000372702.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13
hg19_v2_chr10_+_124670121_124670217	0.0272614	NKX2-3	ENST00000368894.1|FAM24A|ENSG00000203795.2|family with sequence similarity 24, member A
hg19_v2_chr20_-_32262165_32262269	0.0269942	NKX2-3	ENST00000606690.1|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000246190.6|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000439478.1|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3 	ENST00000375238.4|NECAB3|ENSG00000125967.12|N-terminal EF-hand calcium binding protein 3
hg19_v2_chr11_-_62342375_62342471	0.0269883	NKX2-3	ENST00000378019.3|EEF1G|ENSG00000254772.5|eukaryotic translation elongation factor 1 gamma
hg19_v2_chr4_-_90757364_90757396	0.0265689	NKX2-3	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_-_162381907_162381939	0.0265452	NKX2-3	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr20_+_55043647_55043751	0.0264745	NKX2-3	ENST00000023939.4|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000395881.3|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000357348.5|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000449062.1|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000435342.2|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1
hg19_v2_chr20_+_56964169_56964182	0.0262442	NKX2-3	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr12_-_50290839_50290873	0.0259793	NKX2-3	ENST00000552863.1|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr16_-_50913188_50913197	0.0258782	NKX2-3	ENST00000569986.1|CTD-2034I21.1|ENSG00000260042.1|CTD-2034I21.1
hg19_v2_chr13_-_46679144_46679183	0.0258441	NKX2-3	ENST00000181383.4|CPB2|ENSG00000080618.9|carboxypeptidase B2 (plasma)
hg19_v2_chr2_-_201753980_201754026	0.0257055	NKX2-3	ENST00000443398.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000286175.8|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000409449.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr10_-_7513904_7514008	0.0250843	NKX2-3	ENST00000420395.1|RP5-1031D4.2|ENSG00000232591.1|RP5-1031D4.2
hg19_v2_chr6_-_32731243_32731295	0.0249883	NKX2-3	ENST00000427449.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000411527.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr16_-_52119019_52119021	0.0244719	NKX2-3	ENST00000561513.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919 	ENST00000565742.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919
hg19_v2_chr1_+_152943122_152943142	0.0242852	NKX2-3	ENST00000328051.2|SPRR4|ENSG00000184148.3|small proline-rich protein 4
hg19_v2_chr9_+_127020202_127020292	0.0237838	NKX2-3	ENST00000373600.3|NEK6|ENSG00000119408.12|NIMA-related kinase 6 	ENST00000320246.5|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr13_-_46679185_46679211	0.0226713	NKX2-3	ENST00000439329.3|CPB2|ENSG00000080618.9|carboxypeptidase B2 (plasma)
hg19_v2_chr10_+_27793197_27793247	0.0223769	NKX2-3	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr2_+_90458201_90458201	0.022149	NKX2-3	ENST00000603238.1|CH17-132F21.1|ENSG00000270999.1|Uncharacterized protein
hg19_v2_chr11_-_65488260_65488418	0.0218243	NKX2-3	ENST00000527610.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000528220.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000308418.4|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C
hg19_v2_chr1_-_155880672_155880715	0.0217561	NKX2-3	ENST00000609492.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368322.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chrX_-_40036520_40036582	0.0217512	NKX2-3	ENST00000406200.2|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378455.4|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000342274.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr18_+_22040593_22040616	0.0217084	NKX2-3	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr18_+_22040620_22040693	0.0216701	NKX2-3	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr2_+_204103663_204103730	0.0211371	NKX2-3	ENST00000356079.4|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1 	ENST00000429815.2|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr7_-_130353553_130353598	0.0210348	NKX2-3	ENST00000330992.7|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2 	ENST00000445977.2|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2
hg19_v2_chr13_-_30881134_30881181	0.02087	NKX2-3	ENST00000380617.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1 	ENST00000441394.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr3_+_39093481_39093520	0.0208326	NKX2-3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr1_-_33116128_33116185	0.0207652	NKX2-3	ENST00000436661.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000373501.2|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000341885.5|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000468695.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand
hg19_v2_chr17_+_75401152_75401172	0.0205995	NKX2-3	ENST00000585930.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr16_+_8736232_8736325	0.0204037	NKX2-3	ENST00000562973.1|METTL22|ENSG00000067365.10|methyltransferase like 22
hg19_v2_chr6_+_168399772_168399772	0.0203262	NKX2-3	ENST00000443060.2|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr1_-_28559502_28559570	0.0202725	NKX2-3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr7_-_76829125_76829143	0.0202614	NKX2-3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr16_-_3450963_3451065	0.0202085	NKX2-3	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chr15_-_56757329_56757342	0.0199171	NKX2-3	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr13_+_50018402_50018469	0.0197647	NKX2-3	ENST00000354234.4|SETDB2|ENSG00000136169.12|SET domain, bifurcated 2
hg19_v2_chr2_+_201170596_201170619	0.0195488	NKX2-3	ENST00000439084.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000409718.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr4_-_141677267_141677291	0.0194148	NKX2-3	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr16_-_11363178_11363189	0.0193357	NKX2-3	ENST00000312693.3|TNP2|ENSG00000178279.3|transition protein 2 (during histone to protamine replacement)
hg19_v2_chr14_+_55494323_55494345	0.0193107	NKX2-3	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr18_+_43684310_43684373	0.0187053	NKX2-3	ENST00000592471.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1 	ENST00000585518.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chrX_-_134049262_134049297	0.0185071	NKX2-3	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr1_+_206317450_206317478	0.0177637	NKX2-3	ENST00000358184.2|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000361052.3|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000360218.2|CTSE|ENSG00000196188.6|cathepsin E
hg19_v2_chr16_+_69221028_69221092	0.0177375	NKX2-3	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr13_+_50018494_50018520	0.0176126	NKX2-3	ENST00000317257.8|SETDB2|ENSG00000136169.12|SET domain, bifurcated 2
hg19_v2_chr14_+_102276209_102276242	0.0170991	NKX2-3	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr2_-_36825281_36825342	0.0169162	NKX2-3	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr14_+_22948510_22948510	0.0168305	NKX2-3	ENST00000390483.1|TRAJ56|ENSG00000211835.1|T cell receptor alpha joining 56
hg19_v2_chr16_-_18468926_18468926	0.0167966	NKX2-3	ENST00000545114.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr5_-_134783038_134783038	0.0167185	NKX2-3	ENST00000503143.2|C5orf20|ENSG00000251380.2|chromosome 5 open reading frame 20
hg19_v2_chr1_-_22109484_22109528	0.0161063	NKX2-3	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr10_+_103348031_103348092	0.0157007	NKX2-3	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr11_+_93063137_93063168	0.015618	NKX2-3	ENST00000534747.1|CCDC67|ENSG00000165325.9|coiled-coil domain containing 67
hg19_v2_chr5_+_150404904_150404928	0.0151221	NKX2-3	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr3_+_49058444_49058618	0.0150324	NKX2-3	ENST00000326925.6|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3 	ENST00000395458.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr1_-_212965104_212965141	0.0150126	NKX2-3	ENST00000422588.2|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366975.6|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366977.3|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366976.1|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component
hg19_v2_chr11_-_118889323_118889408	0.0147741	NKX2-3	ENST00000527673.1|RPS25|ENSG00000118181.6|ribosomal protein S25
hg19_v2_chr11_-_27384737_27384801	0.0147669	NKX2-3	ENST00000317945.6|CCDC34|ENSG00000109881.12|coiled-coil domain containing 34
hg19_v2_chr14_+_39703084_39703110	0.0141475	NKX2-3	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr6_-_2971494_2971544	0.0139305	NKX2-3	ENST00000380539.1|SERPINB6|ENSG00000124570.13|serpin peptidase inhibitor, clade B (ovalbumin), member 6
hg19_v2_chr4_-_48082192_48082207	0.013925	NKX2-3	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr1_-_22109682_22109719	0.0133913	NKX2-3	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr3_+_108855558_108855733	0.013349	NKX2-3	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr12_-_122712038_122712081	0.0131987	NKX2-3	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr18_+_43684298_43684304	0.0130987	NKX2-3	ENST00000282058.6|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr19_+_41882466_41882483	0.0130222	NKX2-3	ENST00000436170.2|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr14_+_36295638_36295652	0.0129976	NKX2-3	ENST00000543183.1|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr14_-_91720224_91720378	0.0129135	NKX2-3	ENST00000238699.3|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000531499.2|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr3_-_150920979_150921009	0.012823	NKX2-3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr5_+_162930114_162930125	0.0124632	NKX2-3	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr14_+_102276192_102276208	0.0123521	NKX2-3	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr6_-_32731299_32731316	0.0117136	NKX2-3	ENST00000435145.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000437316.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr1_-_152086556_152086556	0.0113551	NKX2-3	ENST00000368804.1|TCHH|ENSG00000159450.8|trichohyalin
hg19_v2_chr17_+_61904766_61904827	0.0112281	NKX2-3	ENST00000581842.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000582130.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000584320.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000585123.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000580864.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr2_-_24270217_24270232	0.0110151	NKX2-3	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr3_-_167191814_167191842	0.0105514	NKX2-3	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr6_-_32634425_32634479	0.0104312	NKX2-3	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr12_+_49761224_49761259	0.0103873	NKX2-3	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr19_-_49955050_49955095	0.0100526	NKX2-3	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr20_-_33539655_33539680	0.0100181	NKX2-3	ENST00000451957.2|GSS|ENSG00000100983.5|glutathione synthetase
hg19_v2_chr17_+_61905058_61905238	0.00969181	NKX2-3	ENST00000375812.4|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000581882.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr16_-_15474904_15474904	0.00963262	NKX2-3	ENST00000534094.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr16_+_14802801_14802801	0.00947334	NKX2-3	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr5_+_140552218_140552244	0.00943808	NKX2-3	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr1_+_156561533_156561613	0.00915976	NKX2-3	ENST00000368234.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein 	ENST00000368235.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein 	ENST00000368233.3|APOA1BP|ENSG00000163382.7|apolipoprotein A-I binding protein
hg19_v2_chr6_-_116833500_116833511	0.00884061	NKX2-3	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr13_+_75126978_75126988	0.00859486	NKX2-3	ENST00000596240.1|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347 	ENST00000451336.2|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347
hg19_v2_chr12_-_48398104_48398269	0.0083663	NKX2-3	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr19_-_39368887_39368935	0.00830428	NKX2-3	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr12_+_49761147_49761167	0.00817165	NKX2-3	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr16_+_2255841_2255891	0.00809852	NKX2-3	ENST00000301725.7|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr11_+_10326612_10326635	0.00788878	NKX2-3	ENST00000534464.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000530439.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000524948.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000528655.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000526492.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000525063.1|ADM|ENSG00000148926.5|adrenomedullin
hg19_v2_chr6_+_33239787_33239859	0.00778174	NKX2-3	ENST00000439602.2|RPS18|ENSG00000231500.2|ribosomal protein S18 	ENST00000474973.1|RPS18|ENSG00000231500.2|ribosomal protein S18
hg19_v2_chr17_+_29248698_29248747	0.00773321	NKX2-3	ENST00000330889.3|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr5_-_142814241_142814278	0.00767743	NKX2-3	ENST00000504572.1|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr11_+_118889142_118889232	0.00742095	NKX2-3	ENST00000533632.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr2_+_102803433_102803511	0.007347	NKX2-3	ENST00000264257.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2 	ENST00000441515.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2
hg19_v2_chr16_+_69458537_69458686	0.00689186	NKX2-3	ENST00000515314.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000561792.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000568237.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v2_chr19_+_8953269_8953269	0.00658114	NKX2-3	ENST00000305625.2|MBD3L1|ENSG00000170948.3|methyl-CpG binding domain protein 3-like 1
hg19_v2_chr5_-_58335281_58335339	0.00647901	NKX2-3	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr8_-_99954788_99954802	0.00600757	NKX2-3	ENST00000523601.1|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr11_+_28131821_28131869	0.00593114	NKX2-3	ENST00000379199.2|METTL15|ENSG00000169519.15|methyltransferase like 15 	ENST00000303459.6|METTL15|ENSG00000169519.15|methyltransferase like 15
hg19_v2_chr16_+_2255710_2255789	0.0058438	NKX2-3	ENST00000397124.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENST00000565250.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr3_-_10452359_10452453	0.0058428	NKX2-3	ENST00000452124.1|ATP2B2|ENSG00000157087.12|ATPase, Ca++ transporting, plasma membrane 2
hg19_v2_chr9_+_130830451_130830572	0.00576064	NKX2-3	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr1_+_155278539_155278559	0.00540672	NKX2-3	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr12_+_10124001_10124034	0.00534956	NKX2-3	ENST00000396507.3|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000304361.4|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000434319.2|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A
hg19_v2_chr19_-_39924349_39924401	0.00534488	NKX2-3	ENST00000602153.1|RPS16|ENSG00000105193.4|ribosomal protein S16
hg19_v2_chr8_+_19674651_19674670	0.00514887	NKX2-3	ENST00000397977.3|INTS10|ENSG00000104613.7|integrator complex subunit 10
hg19_v2_chr4_+_102734967_102735022	0.00475502	NKX2-3	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr11_+_118889456_118889507	0.00450628	NKX2-3	ENST00000528230.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000525303.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000434101.2|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000359005.4|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000533058.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr4_+_158142750_158142836	0.00448912	NKX2-3	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr2_+_64069459_64069579	0.00447015	NKX2-3	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr12_+_101988774_101988849	0.00438065	NKX2-3	ENST00000545503.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000536007.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000541119.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361466.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000551300.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000550270.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chr14_+_21423611_21423665	0.00422237	NKX2-3	ENST00000304625.2|RNASE2|ENSG00000169385.2|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
hg19_v2_chr6_-_144329531_144329546	0.00377349	NKX2-3	ENST00000429150.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392309.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000416623.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000392307.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr1_+_155278625_155278745	0.00318852	NKX2-3	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr1_-_151804314_151804348	0.00318558	NKX2-3	ENST00000318247.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr10_-_104262460_104262489	0.00317906	NKX2-3	ENST00000446605.2|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000369905.4|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000545684.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr2_+_64068844_64068997	0.00309277	NKX2-3	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr10_+_79793518_79793641	0.00307149	NKX2-3	ENST00000440692.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000435275.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000372360.3|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000360830.4|RPS24|ENSG00000138326.14|ribosomal protein S24
hg19_v2_chr2_-_239198743_239198784	0.00286615	NKX2-3	ENST00000440245.1|PER2|ENSG00000132326.7|period circadian clock 2 	ENST00000431832.1|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr14_-_60636561_60636597	0.00253975	NKX2-3	ENST00000536410.2|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000216500.5|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr5_-_110848189_110848240	0.00241469	NKX2-3	ENST00000296632.3|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000512160.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000509887.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr11_+_124735282_124735332	0.00240646	NKX2-3	ENST00000397801.1|ROBO3|ENSG00000154134.10|roundabout, axon guidance receptor, homolog 3 (Drosophila)
hg19_v2_chr11_+_65627865_65627958	0.00215809	NKX2-3	ENST00000308110.4|MUS81|ENSG00000172732.7|MUS81 structure-specific endonuclease subunit
hg19_v2_chr6_+_131148538_131148554	0.00215338	NKX2-3	ENST00000541421.2|SMLR1|ENSG00000256162.2|small leucine-rich protein 1
hg19_v2_chr6_+_42123141_42123279	0.00210866	NKX2-3	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr5_-_77072085_77072139	0.0020574	NKX2-3	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr13_+_50570019_50570028	0.00163865	NKX2-3	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr2_-_31440377_31440411	0.00157494	NKX2-3	ENST00000444918.2|CAPN14|ENSG00000214711.5|calpain 14 	ENST00000403897.3|CAPN14|ENSG00000214711.5|calpain 14
hg19_v2_chrX_+_47420516_47420621	0.00103194	NKX2-3	ENST00000377045.4|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000290277.6|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000377039.2|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog
hg19_v2_chr19_+_33865218_33865254	0.000140354	NKX2-3	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
