hg19_v2_chr16_+_32264040_32264040	0.194459	NKX3-1	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr16_-_32688053_32688053	0.193003	NKX3-1	ENST00000398682.4|TP53TG3|ENSG00000183632.10|TP53 target 3
hg19_v2_chr3_+_98482175_98482197	0.163348	NKX3-1	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr5_-_43412418_43412499	0.148474	NKX3-1	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr4_-_76928641_76928668	0.139696	NKX3-1	ENST00000264888.5|CXCL9|ENSG00000138755.5|chemokine (C-X-C motif) ligand 9
hg19_v2_chrX_+_85403487_85403625	0.121805	NKX3-1	ENST00000373125.4|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr1_+_171217622_171217676	0.121049	NKX3-1	ENST00000433267.1|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1 	ENST00000367750.3|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chrX_+_85403445_85403479	0.120348	NKX3-1	ENST00000373131.1|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr9_-_73477826_73477993	0.105629	NKX3-1	ENST00000396285.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000396292.4|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000396280.5|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000358082.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000408909.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377097.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr16_+_33204156_33204156	0.103971	NKX3-1	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr14_+_95078714_95078739	0.102141	NKX3-1	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr6_+_80129989_80130014	0.0958454	NKX3-1	ENST00000429444.1|RP1-232L24.3|ENSG00000231533.1|RP1-232L24.3
hg19_v2_chr4_-_170924888_170924950	0.0945156	NKX3-1	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr14_-_60337684_60337834	0.0910943	NKX3-1	ENST00000267484.5|RTN1|ENSG00000139970.12|reticulon 1
hg19_v2_chr20_-_56285595_56285656	0.0836343	NKX3-1	ENST00000395816.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000347215.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr11_+_7506713_7506773	0.0803368	NKX3-1	ENST00000329293.3|OLFML1|ENSG00000183801.3|olfactomedin-like 1 	ENST00000534244.1|OLFML1|ENSG00000183801.3|olfactomedin-like 1
hg19_v2_chr5_+_150404904_150404928	0.0786564	NKX3-1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr20_-_56286479_56286541	0.0773438	NKX3-1	ENST00000265626.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr19_+_50433476_50433510	0.0703059	NKX3-1	ENST00000596658.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr3_-_18480260_18480269	0.0671601	NKX3-1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr3_-_178976996_178976996	0.0660661	NKX3-1	ENST00000485523.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr6_+_26124373_26124431	0.0657633	NKX3-1	ENST00000377791.2|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac 	ENST00000602637.1|HIST1H2AC|ENSG00000180573.8|histone cluster 1, H2ac
hg19_v2_chr17_-_34257731_34257766	0.0614977	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr19_-_42894420_42894451	0.0567761	NKX3-1	ENST00000597255.1|CNFN|ENSG00000105427.5|cornifelin 	ENST00000222032.5|CNFN|ENSG00000105427.5|cornifelin
hg19_v2_chr1_-_48866517_48866534	0.0566936	NKX3-1	ENST00000371841.1|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr17_-_2966901_2966901	0.0550332	NKX3-1	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr17_-_29641084_29641103	0.0536284	NKX3-1	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr14_+_23654525_23654545	0.0522638	NKX3-1	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr16_-_31076332_31076409	0.0503815	NKX3-1	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chrX_-_153637612_153637628	0.0495655	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr19_+_54609230_54609272	0.048235	NKX3-1	ENST00000420296.1|NDUFA3|ENSG00000170906.11|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
hg19_v2_chr17_-_76870126_76870201	0.0478423	NKX3-1	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr5_-_139937895_139937895	0.0472891	NKX3-1	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr16_-_87970122_87970122	0.0465185	NKX3-1	ENST00000309893.2|CA5A|ENSG00000174990.3|carbonic anhydrase VA, mitochondrial
hg19_v2_chr19_+_35396219_35396233	0.0456315	NKX3-1	ENST00000595783.1|CTC-523E23.6|ENSG00000269037.1|CTC-523E23.6
hg19_v2_chr17_-_76870222_76870242	0.0455541	NKX3-1	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr16_-_31076273_31076290	0.0455289	NKX3-1	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr22_+_18632666_18632764	0.0447594	NKX3-1	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr5_-_134783038_134783038	0.0429839	NKX3-1	ENST00000503143.2|C5orf20|ENSG00000251380.2|chromosome 5 open reading frame 20
hg19_v2_chr3_+_156807663_156807677	0.0428918	NKX3-1	ENST00000467995.1|LINC00881|ENSG00000241135.1|long intergenic non-protein coding RNA 881 	ENST00000474477.1|LINC00881|ENSG00000241135.1|long intergenic non-protein coding RNA 881 	ENST00000471719.1|LINC00881|ENSG00000241135.1|long intergenic non-protein coding RNA 881
hg19_v2_chr12_-_92536433_92536459	0.0421517	NKX3-1	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr19_-_42006539_42006559	0.0420626	NKX3-1	ENST00000597702.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000588495.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000595837.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000594315.1|AC011526.1|ENSG00000267107.2|AC011526.1
hg19_v2_chr17_-_55911970_55912121	0.0420157	NKX3-1	ENST00000581805.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3	ENST00000580960.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3
hg19_v2_chr18_+_61144160_61144360	0.0410306	NKX3-1	ENST00000489441.1|SERPINB5|ENSG00000206075.9|serpin peptidase inhibitor, clade B (ovalbumin), member 5 	ENST00000424602.1|SERPINB5|ENSG00000206075.9|serpin peptidase inhibitor, clade B (ovalbumin), member 5
hg19_v2_chr11_+_9482512_9482534	0.0405189	NKX3-1	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr2_-_187367356_187367356	0.0403983	NKX3-1	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr4_-_138453606_138453673	0.0402582	NKX3-1	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr7_-_112635675_112635720	0.0396291	NKX3-1	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr8_+_27168988_27169021	0.0394225	NKX3-1	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr3_+_158991025_158991083	0.038426	NKX3-1	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr17_-_7145475_7145774	0.0380035	NKX3-1	ENST00000571129.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000571253.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000573928.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein
hg19_v2_chr17_-_39526052_39526052	0.0367926	NKX3-1	ENST00000251646.3|KRT33B|ENSG00000131738.5|keratin 33B
hg19_v2_chr10_+_120116527_120116620	0.0365004	NKX3-1	ENST00000445161.1|LINC00867|ENSG00000232139.1|long intergenic non-protein coding RNA 867
hg19_v2_chr4_-_46126093_46126106	0.0354943	NKX3-1	ENST00000295452.4|GABRG1|ENSG00000163285.7|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg19_v2_chr14_-_74551096_74551171	0.0349011	NKX3-1	ENST00000350259.4|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr6_-_57087042_57087128	0.0345223	NKX3-1	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr17_-_14683517_14683523	0.0344774	NKX3-1	ENST00000379640.1|AC005863.1|ENSG00000205325.1|AC005863.1
hg19_v2_chr15_+_58702742_58702777	0.0343008	NKX3-1	ENST00000356113.6|LIPC|ENSG00000166035.6|lipase, hepatic 	ENST00000414170.3|LIPC|ENSG00000166035.6|lipase, hepatic
hg19_v2_chr10_-_91403625_91403649	0.034001	NKX3-1	ENST00000322191.6|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000342512.3|PANK1|ENSG00000152782.12|pantothenate kinase 1 	ENST00000371774.2|PANK1|ENSG00000152782.12|pantothenate kinase 1
hg19_v2_chr14_-_68066849_68066972	0.0338006	NKX3-1	ENST00000558493.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000561272.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr20_-_271009_271088	0.033688	NKX3-1	ENST00000382369.5|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr10_+_5406935_5406972	0.0332149	NKX3-1	ENST00000380433.3|UCN3|ENSG00000178473.5|urocortin 3
hg19_v2_chr1_-_89488510_89488565	0.0332097	NKX3-1	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr1_-_160232312_160232323	0.0308393	NKX3-1	ENST00000440682.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr13_+_24144509_24144589	0.0304761	NKX3-1	ENST00000248484.4|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr8_+_77593448_77593471	0.0303301	NKX3-1	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr11_-_62323702_62323738	0.0294874	NKX3-1	ENST00000530285.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr4_+_70916119_70916167	0.0288607	NKX3-1	ENST00000246896.3|HTN1|ENSG00000126550.4|histatin 1 	ENST00000511674.1|HTN1|ENSG00000126550.4|histatin 1
hg19_v2_chrX_-_102757802_102757810	0.0284889	NKX3-1	ENST00000372633.1|RAB40A|ENSG00000172476.3|RAB40A, member RAS oncogene family
hg19_v2_chr3_+_132316081_132316102	0.0275939	NKX3-1	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr15_+_31196080_31196136	0.0274771	NKX3-1	ENST00000561607.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1 	ENST00000565466.1|FAN1|ENSG00000198690.5|FANCD2/FANCI-associated nuclease 1
hg19_v2_chr5_+_140723601_140723601	0.0269524	NKX3-1	ENST00000253812.6|PCDHGA3|ENSG00000254245.1|protocadherin gamma subfamily A, 3
hg19_v2_chr13_+_50570019_50570028	0.0269451	NKX3-1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr19_+_58193388_58193413	0.0264329	NKX3-1	ENST00000596085.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000594684.1|AC003006.7|ENSG00000269026.2|Uncharacterized protein
hg19_v2_chr20_-_271304_271422	0.0263793	NKX3-1	ENST00000400269.3|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96 	ENST00000360321.2|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr15_+_44084040_44084155	0.0258432	NKX3-1	ENST00000249786.4|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr3_-_51813009_51813009	0.0254444	NKX3-1	ENST00000398780.3|IQCF6|ENSG00000214686.3|IQ motif containing F6
hg19_v2_chr4_-_48082192_48082207	0.0252777	NKX3-1	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr12_-_89920030_89920039	0.0248826	NKX3-1	ENST00000413530.1|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) 	ENST00000547474.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr6_+_63921399_63921462	0.0235545	NKX3-1	ENST00000356170.3|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr5_+_112312416_112312440	0.023411	NKX3-1	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr4_-_1685718_1686029	0.0234089	NKX3-1	ENST00000472884.2|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000489363.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000308132.6|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000463238.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr7_-_2883928_2883993	0.0225543	NKX3-1	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr20_-_45318051_45318118	0.0224344	NKX3-1	ENST00000372102.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr20_-_2821271_2821343	0.0223034	NKX3-1	ENST00000448755.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000360652.2|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr15_+_85147127_85147142	0.0217746	NKX3-1	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr8_-_49833978_49833996	0.0216801	NKX3-1	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chrX_-_107681633_107681692	0.0215818	NKX3-1	ENST00000394872.2|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6 	ENST00000334504.7|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr14_-_74551172_74551196	0.0212598	NKX3-1	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chrX_+_153237740_153237778	0.0210668	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr16_-_3074231_3074313	0.0207021	NKX3-1	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr3_+_113251143_113251263	0.0204671	NKX3-1	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr20_+_2795609_2795620	0.0204244	NKX3-1	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr6_+_43266063_43266097	0.0203219	NKX3-1	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr8_-_97247759_97247862	0.0203159	NKX3-1	ENST00000518406.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000523920.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000287022.5|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein
hg19_v2_chr5_+_178977546_178977571	0.0201482	NKX3-1	ENST00000319449.4|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1 	ENST00000377001.2|RUFY1|ENSG00000176783.10|RUN and FYVE domain containing 1
hg19_v2_chr5_+_150051149_150051323	0.0200752	NKX3-1	ENST00000523553.1|MYOZ3|ENSG00000164591.9|myozenin 3
hg19_v2_chr5_-_150138551_150138671	0.0193909	NKX3-1	ENST00000446090.2|DCTN4|ENSG00000132912.8|dynactin 4 (p62) 	ENST00000447998.2|DCTN4|ENSG00000132912.8|dynactin 4 (p62)
hg19_v2_chr8_-_49834299_49834446	0.0191376	NKX3-1	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr20_-_2821756_2821836	0.0190204	NKX3-1	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr10_+_18629628_18629672	0.0190084	NKX3-1	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr20_+_2821340_2821365	0.0185372	NKX3-1	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr16_+_73420942_73420962	0.0185357	NKX3-1	ENST00000554640.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000562661.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1	ENST00000561875.1|RP11-140I24.1|ENSG00000258779.2|RP11-140I24.1
hg19_v2_chr17_-_7307358_7307456	0.0182593	NKX3-1	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr8_-_93029520_93029591	0.0179856	NKX3-1	ENST00000521553.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr15_-_55563072_55563135	0.0178317	NKX3-1	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr5_-_176889381_176889432	0.0176023	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr15_-_43876702_43876702	0.0175086	NKX3-1	ENST00000348806.6|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr14_+_22580233_22580313	0.01743	NKX3-1	ENST00000390454.2|TRAV25|ENSG00000211806.2|T cell receptor alpha variable 25
hg19_v2_chr12_+_111051902_111051975	0.017311	NKX3-1	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr11_+_108093839_108093850	0.0173007	NKX3-1	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr7_-_5998714_5998714	0.0172926	NKX3-1	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr1_+_84873913_84873958	0.0169961	NKX3-1	ENST00000370662.3|DNASE2B|ENSG00000137976.7|deoxyribonuclease II beta
hg19_v2_chr2_+_201994569_201994589	0.016922	NKX3-1	ENST00000457277.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr1_+_27114589_27114712	0.0167037	NKX3-1	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr2_+_113672770_113672770	0.0166978	NKX3-1	ENST00000311328.2|IL37|ENSG00000125571.5|interleukin 37
hg19_v2_chr1_-_120190396_120190396	0.0166449	NKX3-1	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr3_-_48632593_48632770	0.0163859	NKX3-1	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr15_+_44084503_44084575	0.0163348	NKX3-1	ENST00000409960.2|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409646.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000594896.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000339624.5|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409291.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000402131.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000403425.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000430901.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr20_-_36661826_36661870	0.0160414	NKX3-1	ENST00000373448.2|TTI1|ENSG00000101407.8|TELO2 interacting protein 1 	ENST00000373447.3|TTI1|ENSG00000101407.8|TELO2 interacting protein 1
hg19_v2_chr10_-_61900762_61900779	0.0160104	NKX3-1	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr12_+_96883347_96883400	0.0158519	NKX3-1	ENST00000524981.4|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55 	ENST00000298953.3|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55
hg19_v2_chr17_+_2699697_2699776	0.0158006	NKX3-1	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr12_-_89919765_89919849	0.0157516	NKX3-1	ENST00000541909.1|POC1B|ENSG00000139323.9|POC1 centriolar protein B 	ENST00000313546.3|POC1B|ENSG00000139323.9|POC1 centriolar protein B
hg19_v2_chr13_+_24883703_24883718	0.0155012	NKX3-1	ENST00000332018.4|C1QTNF9|ENSG00000240654.2|C1q and tumor necrosis factor related protein 9
hg19_v2_chr11_+_67798090_67798101	0.0155006	NKX3-1	ENST00000313468.5|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr13_+_115000556_115000573	0.0151418	NKX3-1	ENST00000252458.6|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr4_-_138453559_138453572	0.0149842	NKX3-1	ENST00000511115.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr12_-_75603482_75603534	0.0148152	NKX3-1	ENST00000341669.3|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000298972.1|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000350228.2|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v2_chr12_+_111051832_111051873	0.0147632	NKX3-1	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr2_-_27545921_27545981	0.0145745	NKX3-1	ENST00000402310.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405983.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000403262.2|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000428910.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000402722.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000399052.4|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000380044.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405076.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein
hg19_v2_chr2_-_79313973_79314059	0.0144702	NKX3-1	ENST00000454188.1|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chr19_+_58144529_58144584	0.0143595	NKX3-1	ENST00000347302.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000254182.7|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000391703.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000541801.1|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000299871.5|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000544273.1|ZNF211|ENSG00000121417.9|zinc finger protein 211
hg19_v2_chr19_+_58144589_58144603	0.0141998	NKX3-1	ENST00000240731.4|ZNF211|ENSG00000121417.9|zinc finger protein 211
hg19_v2_chr19_+_52074502_52074587	0.0139338	NKX3-1	ENST00000545217.1|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000262259.2|ZNF175|ENSG00000105497.3|zinc finger protein 175 	ENST00000596504.1|ZNF175|ENSG00000105497.3|zinc finger protein 175
hg19_v2_chr16_+_1832902_1833008	0.0136663	NKX3-1	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr5_-_1799932_1799960	0.0135373	NKX3-1	ENST00000382647.7|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36 	ENST00000505059.2|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr11_+_65266507_65266522	0.0131701	NKX3-1	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr8_+_87878640_87878673	0.0130328	NKX3-1	ENST00000518476.1|CNBD1|ENSG00000176571.7|cyclic nucleotide binding domain containing 1
hg19_v2_chr19_-_2944907_2944981	0.0130296	NKX3-1	ENST00000314531.4|ZNF77|ENSG00000175691.8|zinc finger protein 77
hg19_v2_chr19_-_56110859_56110996	0.0128862	NKX3-1	ENST00000221665.3|FIZ1|ENSG00000179943.6|FLT3-interacting zinc finger 1 	ENST00000592585.1|FIZ1|ENSG00000179943.6|FLT3-interacting zinc finger 1
hg19_v2_chr11_+_8040739_8040815	0.0126427	NKX3-1	ENST00000534099.1|TUB|ENSG00000166402.4|tubby bipartite transcription factor
hg19_v2_chr11_-_61687739_61687761	0.012595	NKX3-1	ENST00000531922.1|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1 	ENST00000301773.5|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1
hg19_v2_chr1_+_161475208_161475226	0.0123271	NKX3-1	ENST00000367972.4|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32) 	ENST00000271450.6|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32)
hg19_v2_chr17_+_37824411_37824516	0.0121672	NKX3-1	ENST00000269582.2|PNMT|ENSG00000141744.3|phenylethanolamine N-methyltransferase
hg19_v2_chr6_-_80247105_80247133	0.0121661	NKX3-1	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr13_+_115000521_115000536	0.012141	NKX3-1	ENST00000252457.5|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375308.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr11_+_67798114_67798227	0.0120903	NKX3-1	ENST00000453471.2|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000528492.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000526339.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000525419.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr11_+_71791693_71791799	0.0120399	NKX3-1	ENST00000289488.2|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000447974.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr3_-_160117301_160117342	0.0115287	NKX3-1	ENST00000326448.7|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000498409.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000475677.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas) 	ENST00000478536.1|IFT80|ENSG00000068885.10|intraflagellar transport 80 homolog (Chlamydomonas)
hg19_v2_chr4_+_155702496_155702657	0.011457	NKX3-1	ENST00000510397.1|RBM46|ENSG00000151962.3|RNA binding motif protein 46
hg19_v2_chr5_-_76788134_76788148	0.01143	NKX3-1	ENST00000507029.1|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr10_+_114133773_114133784	0.0113795	NKX3-1	ENST00000354655.4|ACSL5|ENSG00000197142.6|acyl-CoA synthetase long-chain family member 5
hg19_v2_chr1_+_202431859_202431871	0.0113004	NKX3-1	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr19_+_58193337_58193386	0.0112916	NKX3-1	ENST00000601064.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000282296.5|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000356715.4|ZNF551|ENSG00000204519.6|zinc finger protein 551
hg19_v2_chr17_+_37824217_37824234	0.0112896	NKX3-1	ENST00000394246.1|PNMT|ENSG00000141744.3|phenylethanolamine N-methyltransferase
hg19_v2_chr5_-_1799864_1799930	0.0112629	NKX3-1	ENST00000510999.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr6_-_144416737_144416766	0.0112566	NKX3-1	ENST00000367569.2|SF3B5|ENSG00000169976.5|splicing factor 3b, subunit 5, 10kDa
hg19_v2_chr1_-_22109484_22109528	0.0112472	NKX3-1	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr10_+_46994087_46994087	0.0112084	NKX3-1	ENST00000374317.1|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr5_+_125758865_125758876	0.010844	NKX3-1	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr1_-_154832316_154832336	0.0107185	NKX3-1	ENST00000361147.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr5_-_76788024_76788112	0.0106523	NKX3-1	ENST00000515253.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000414719.2|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000507654.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000514559.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000511791.1|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr16_+_89628778_89628803	0.0103302	NKX3-1	ENST00000472354.1|RPL13|ENSG00000167526.9|ribosomal protein L13
hg19_v2_chr5_-_1799965_1800009	0.0102542	NKX3-1	ENST00000508987.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr5_+_125758813_125758845	0.0101082	NKX3-1	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr15_-_43513187_43513251	0.00996889	NKX3-1	ENST00000540029.1|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2 	ENST00000441366.2|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2
hg19_v2_chr1_-_39339777_39339777	0.0099663	NKX3-1	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr20_+_3052264_3052270	0.00970164	NKX3-1	ENST00000217386.2|OXT|ENSG00000101405.3|oxytocin/neurophysin I prepropeptide
hg19_v2_chr11_+_8704748_8704792	0.00960561	NKX3-1	ENST00000526562.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a 	ENST00000525981.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a
hg19_v2_chr3_+_100428188_100428222	0.0096011	NKX3-1	ENST00000418917.2|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000490574.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr11_-_71823796_71823826	0.00958745	NKX3-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr3_+_100428268_100428287	0.00957056	NKX3-1	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr15_-_31393910_31393936	0.00945271	NKX3-1	ENST00000397795.2|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000256552.6|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000559179.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr4_-_105416039_105416065	0.00941288	NKX3-1	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr8_-_30706608_30706608	0.00940908	NKX3-1	ENST00000256246.2|TEX15|ENSG00000133863.2|testis expressed 15
hg19_v2_chr1_-_35497506_35497574	0.00933443	NKX3-1	ENST00000317538.5|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000373340.2|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000357182.4|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6
hg19_v2_chr4_+_76481258_76481289	0.00928477	NKX3-1	ENST00000311623.4|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26 	ENST00000435974.2|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26
hg19_v2_chr17_+_80674559_80674663	0.00922902	NKX3-1	ENST00000269373.6|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000535965.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000577128.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000573158.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein
hg19_v2_chr11_-_101454234_101454255	0.0091574	NKX3-1	ENST00000348423.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000360497.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000532133.1|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr20_-_49253425_49253427	0.00907583	NKX3-1	ENST00000045083.2|FAM65C|ENSG00000042062.7|family with sequence similarity 65, member C
hg19_v2_chr3_+_100428316_100428471	0.00893336	NKX3-1	ENST00000479672.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000476228.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000463568.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr10_-_28571015_28571067	0.00877607	NKX3-1	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr4_+_37962018_37962056	0.00867694	NKX3-1	ENST00000504686.1|PTTG2|ENSG00000250254.1|pituitary tumor-transforming 2
hg19_v2_chr6_+_43603552_43603563	0.00832338	NKX3-1	ENST00000372171.4|MAD2L1BP|ENSG00000124688.9|MAD2L1 binding protein
hg19_v2_chr7_+_150147711_150147733	0.00829105	NKX3-1	ENST00000307271.3|GIMAP8|ENSG00000171115.3|GTPase, IMAP family member 8
hg19_v2_chr17_-_64187973_64188043	0.00816988	NKX3-1	ENST00000583358.1|CEP112|ENSG00000154240.12|centrosomal protein 112kDa 	ENST00000392769.2|CEP112|ENSG00000154240.12|centrosomal protein 112kDa
hg19_v2_chr10_+_135204338_135204338	0.00810048	NKX3-1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr10_+_103348031_103348092	0.00807548	NKX3-1	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr17_+_33914460_33914536	0.00801956	NKX3-1	ENST00000537622.2|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr11_-_118901559_118901621	0.00797767	NKX3-1	ENST00000330775.7|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000545985.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000357590.5|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000538950.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v2_chr3_-_69101461_69101494	0.00795202	NKX3-1	ENST00000543976.1|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr16_+_83986827_83986852	0.00791435	NKX3-1	ENST00000393306.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1 	ENST00000565123.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1
hg19_v2_chr7_-_7680601_7680632	0.00782526	NKX3-1	ENST00000396682.2|RPA3|ENSG00000106399.7|replication protein A3, 14kDa
hg19_v2_chr15_-_50558223_50558263	0.00777236	NKX3-1	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr12_-_371994_372039	0.00765798	NKX3-1	ENST00000343164.4|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000436453.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000445055.2|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000546319.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13
hg19_v2_chr17_+_33914276_33914386	0.00763556	NKX3-1	ENST00000592545.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000538556.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000312678.8|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000589344.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr11_+_67798363_67798433	0.00743132	NKX3-1	ENST00000525628.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr4_-_90756769_90756846	0.00741211	NKX3-1	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr6_-_144385698_144385742	0.00723776	NKX3-1	ENST00000444202.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000437412.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr20_+_2795626_2795657	0.00713819	NKX3-1	ENST00000603872.1|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141 	ENST00000380589.4|C20orf141|ENSG00000258713.2|chromosome 20 open reading frame 141
hg19_v2_chr15_-_43877062_43877090	0.00708919	NKX3-1	ENST00000381885.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1 	ENST00000396923.3|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr7_+_7222233_7222327	0.00703566	NKX3-1	ENST00000436587.2|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr3_-_69101413_69101457	0.00700785	NKX3-1	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr11_-_71823715_71823792	0.00690507	NKX3-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr7_+_141463897_141463897	0.00687387	NKX3-1	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr12_+_96252706_96252789	0.00677395	NKX3-1	ENST00000266735.5|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F 	ENST00000553192.1|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F 	ENST00000552085.1|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F
hg19_v2_chrX_-_51797351_51797351	0.00651245	NKX3-1	ENST00000375644.3|RP11-114H20.1|ENSG00000182776.4|RP11-114H20.1
hg19_v2_chr9_+_117350009_117350111	0.00633894	NKX3-1	ENST00000374050.3|ATP6V1G1|ENSG00000136888.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v2_chr14_-_68066975_68067027	0.00625291	NKX3-1	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr6_-_116833500_116833511	0.00623718	NKX3-1	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr3_+_124223586_124223628	0.00596598	NKX3-1	ENST00000393496.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr20_-_34330129_34330234	0.00594511	NKX3-1	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr5_-_77072085_77072139	0.00592874	NKX3-1	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr11_-_26588634_26588775	0.00592686	NKX3-1	ENST00000436318.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated 	ENST00000281268.8|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr4_-_90757364_90757396	0.00569737	NKX3-1	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr9_-_139640458_139640474	0.00555595	NKX3-1	ENST00000476567.1|LCN6|ENSG00000267206.1|lipocalin 6
hg19_v2_chrX_+_51942963_51942963	0.00543065	NKX3-1	ENST00000375625.3|RP11-363G10.2|ENSG00000179028.4|RP11-363G10.2
hg19_v2_chr12_-_49333446_49333446	0.00541696	NKX3-1	ENST00000537495.1|AC073610.5|ENSG00000255863.1|Uncharacterized protein
hg19_v2_chr4_-_141677267_141677291	0.00536447	NKX3-1	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr16_-_69373396_69373570	0.00529905	NKX3-1	ENST00000562595.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000562081.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000306875.4|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8
hg19_v2_chr3_-_121379739_121379771	0.00519977	NKX3-1	ENST00000428394.2|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1 	ENST00000314583.3|HCLS1|ENSG00000180353.6|hematopoietic cell-specific Lyn substrate 1
hg19_v2_chr11_+_65337901_65338153	0.00515859	NKX3-1	ENST00000309328.3|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000531405.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000527920.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526877.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000533115.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526433.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1
hg19_v2_chr12_-_89919965_89919978	0.00515344	NKX3-1	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr13_+_27998681_27998826	0.00513141	NKX3-1	ENST00000381140.4|GTF3A|ENSG00000122034.8|general transcription factor IIIA
hg19_v2_chr1_-_216596738_216596796	0.00499817	NKX3-1	ENST00000307340.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366943.2|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild) 	ENST00000366942.3|USH2A|ENSG00000042781.8|Usher syndrome 2A (autosomal recessive, mild)
hg19_v2_chrX_-_47341928_47342010	0.00499197	NKX3-1	ENST00000313116.7|ZNF41|ENSG00000147124.8|zinc finger protein 41
hg19_v2_chr19_+_37341260_37341284	0.00494425	NKX3-1	ENST00000589046.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr6_+_52930237_52930257	0.00493656	NKX3-1	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr8_-_38034234_38034258	0.00489553	NKX3-1	ENST00000311351.4|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr8_-_38034192_38034217	0.00482312	NKX3-1	ENST00000520755.1|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr12_-_125398602_125398625	0.00473696	NKX3-1	ENST00000541272.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000535131.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr9_-_111882195_111882255	0.0047108	NKX3-1	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr7_+_107301065_107301080	0.00448788	NKX3-1	ENST00000265715.3|SLC26A4|ENSG00000091137.7|solute carrier family 26 (anion exchanger), member 4
hg19_v2_chr19_+_13080296_13080395	0.0043339	NKX3-1	ENST00000317060.2|DAND5|ENSG00000179284.4|DAN domain family member 5, BMP antagonist
hg19_v2_chr1_-_22109682_22109719	0.00423762	NKX3-1	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr14_-_47812321_47812438	0.00421464	NKX3-1	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr16_+_47496023_47496116	0.00419386	NKX3-1	ENST00000567200.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr1_-_208417620_208417680	0.00416553	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr6_-_159240415_159240444	0.00392358	NKX3-1	ENST00000367075.3|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr19_+_17970693_17970741	0.00383959	NKX3-1	ENST00000600147.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a 	ENST00000599898.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr17_-_29641104_29641130	0.00381892	NKX3-1	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr15_+_99645277_99645292	0.00377361	NKX3-1	ENST00000336292.6|SYNM|ENSG00000182253.10|synemin, intermediate filament protein 	ENST00000328642.7|SYNM|ENSG00000182253.10|synemin, intermediate filament protein
hg19_v2_chr1_+_151372010_151372055	0.00367461	NKX3-1	ENST00000290541.6|PSMB4|ENSG00000159377.6|proteasome (prosome, macropain) subunit, beta type, 4
hg19_v2_chr6_+_143999072_143999170	0.003616	NKX3-1	ENST00000440869.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000367582.3|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000451827.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chrX_-_24665353_24665382	0.00343083	NKX3-1	ENST00000379144.2|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr3_-_156840776_156840823	0.00338333	NKX3-1	ENST00000471357.1|LINC00880|ENSG00000243629.1|long intergenic non-protein coding RNA 880
hg19_v2_chr21_-_27107198_27107227	0.00327277	NKX3-1	ENST00000400094.1|ATP5J|ENSG00000154723.8|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg19_v2_chr3_+_52489503_52489540	0.00323049	NKX3-1	ENST00000345716.4|NISCH|ENSG00000010322.11|nischarin
hg19_v2_chr2_+_48541776_48541874	0.00307783	NKX3-1	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr2_+_64069459_64069579	0.00306989	NKX3-1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr4_+_159131630_159131647	0.00306967	NKX3-1	ENST00000504569.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000509278.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000514558.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000503200.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr8_+_30300119_30300137	0.00265323	NKX3-1	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr19_+_17970677_17970686	0.00261913	NKX3-1	ENST00000222247.5|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr12_-_127256772_127256813	0.0025357	NKX3-1	ENST00000536517.1|LINC00944|ENSG00000256128.1|long intergenic non-protein coding RNA 944
hg19_v2_chr12_-_125398654_125398687	0.00250624	NKX3-1	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr8_-_27168737_27168836	0.00249289	NKX3-1	ENST00000521253.1|TRIM35|ENSG00000104228.8|tripartite motif containing 35 	ENST00000305364.4|TRIM35|ENSG00000104228.8|tripartite motif containing 35
hg19_v2_chr14_-_102829051_102829237	0.00246435	NKX3-1	ENST00000536961.2|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein 	ENST00000541568.2|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein 	ENST00000216756.6|CINP|ENSG00000100865.10|cyclin-dependent kinase 2 interacting protein
hg19_v2_chr13_-_48669232_48669267	0.00221552	NKX3-1	ENST00000258648.2|MED4|ENSG00000136146.10|mediator complex subunit 4 	ENST00000378586.1|MED4|ENSG00000136146.10|mediator complex subunit 4
hg19_v2_chr12_-_39300071_39300097	0.00214116	NKX3-1	ENST00000550863.1|CPNE8|ENSG00000139117.9|copine VIII
hg19_v2_chr12_+_70219052_70219096	0.00198956	NKX3-1	ENST00000552032.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like 	ENST00000547771.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like
hg19_v2_chr11_-_104480019_104480058	0.00192661	NKX3-1	ENST00000536529.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000545630.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000538641.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1
hg19_v2_chr10_-_104953009_104953061	0.00191908	NKX3-1	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr16_+_22501658_22501658	0.00173848	NKX3-1	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr5_+_64920826_64920891	0.00157452	NKX3-1	ENST00000438419.2|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000231526.4|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000505553.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000545191.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13
hg19_v2_chr2_+_191273052_191273121	0.00136202	NKX3-1	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr6_+_37321823_37321867	0.00132563	NKX3-1	ENST00000487950.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase 	ENST00000469731.1|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase
hg19_v2_chr5_+_96211643_96211697	0.00128557	NKX3-1	ENST00000437043.3|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2 	ENST00000510373.1|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr18_-_3845321_3845371	0.00123281	NKX3-1	ENST00000539435.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400147.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr19_+_56111680_56111735	0.00114635	NKX3-1	ENST00000301073.3|ZNF524|ENSG00000171443.6|zinc finger protein 524
hg19_v2_chr18_+_29769978_29769989	0.00113536	NKX3-1	ENST00000269202.6|MEP1B|ENSG00000141434.7|meprin A, beta 	ENST00000581447.1|MEP1B|ENSG00000141434.7|meprin A, beta
hg19_v2_chr2_+_64068844_64068997	0.00101325	NKX3-1	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr17_+_41150793_41150826	0.000971915	NKX3-1	ENST00000586277.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr12_-_125398850_125399198	0.000964369	NKX3-1	ENST00000535859.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546271.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540700.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546120.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr12_-_54978086_54978100	0.000925413	NKX3-1	ENST00000553113.1|PPP1R1A|ENSG00000135447.12|protein phosphatase 1, regulatory (inhibitor) subunit 1A
hg19_v2_chr2_+_132160448_132160491	0.000808789	NKX3-1	ENST00000437751.1|AC073869.19|ENSG00000223631.1|long intergenic non-protein coding RNA 1120
hg19_v2_chr3_-_15106747_15106842	0.000675907	NKX3-1	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr12_-_111926342_111926416	0.000564254	NKX3-1	ENST00000389154.3|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr16_+_3068393_3068446	0.00041775	NKX3-1	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr1_+_95616933_95616933	0.000360443	NKX3-1	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr1_+_158323244_158323269	0.000354831	NKX3-1	ENST00000434258.1|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chr12_-_43833515_43833515	0.000293856	NKX3-1	ENST00000549670.1|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20 	ENST00000395541.2|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20
hg19_v2_chr2_+_173686303_173686325	0.000289976	NKX3-1	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr2_+_238877424_238877439	0.00016806	NKX3-1	ENST00000434655.1|UBE2F|ENSG00000184182.14|ubiquitin-conjugating enzyme E2F (putative)
hg19_v2_chr1_+_158323486_158323540	0.000124214	NKX3-1	ENST00000444681.2|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368167.3|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chrX_-_31285042_31285103	6.39374e-05	NKX3-1	ENST00000378680.2|DMD|ENSG00000198947.10|dystrophin 	ENST00000378723.3|DMD|ENSG00000198947.10|dystrophin
