hg19_v2_chr8_+_70378852_70378866	0.522659	OTX2_CRX	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr12_+_6949964_6950138	0.492649	OTX2_CRX	ENST00000541978.1|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3 	ENST00000435982.2|GNB3|ENSG00000111664.6|guanine nucleotide binding protein (G protein), beta polypeptide 3
hg19_v2_chr5_-_41510725_41510738	0.421957	OTX2_CRX	ENST00000328457.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr5_-_41510656_41510713	0.421849	OTX2_CRX	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr12_-_2027639_2027797	0.323444	OTX2_CRX	ENST00000586184.1|CACNA2D4|ENSG00000151062.10|calcium channel, voltage-dependent, alpha 2/delta subunit 4 	ENST00000587995.1|CACNA2D4|ENSG00000151062.10|calcium channel, voltage-dependent, alpha 2/delta subunit 4 	ENST00000585732.1|CACNA2D4|ENSG00000151062.10|calcium channel, voltage-dependent, alpha 2/delta subunit 4
hg19_v2_chr1_+_114522049_114522131	0.293551	OTX2_CRX	ENST00000369551.1|OLFML3|ENSG00000116774.7|olfactomedin-like 3 	ENST00000320334.4|OLFML3|ENSG00000116774.7|olfactomedin-like 3
hg19_v2_chr12_-_91576561_91576613	0.292061	OTX2_CRX	ENST00000547568.2|DCN|ENSG00000011465.12|decorin 	ENST00000552962.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr12_-_91576429_91576491	0.290015	OTX2_CRX	ENST00000552145.1|DCN|ENSG00000011465.12|decorin 	ENST00000546745.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr12_-_91576750_91576900	0.27851	OTX2_CRX	ENST00000228329.5|DCN|ENSG00000011465.12|decorin 	ENST00000303320.3|DCN|ENSG00000011465.12|decorin 	ENST00000052754.5|DCN|ENSG00000011465.12|decorin
hg19_v2_chr1_+_159141397_159141549	0.253694	OTX2_CRX	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chrX_+_69488174_69488202	0.247793	OTX2_CRX	ENST00000480877.2|ARR3|ENSG00000120500.13|arrestin 3, retinal (X-arrestin) 	ENST00000307959.8|ARR3|ENSG00000120500.13|arrestin 3, retinal (X-arrestin)
hg19_v2_chr9_-_95244781_95244796	0.238067	OTX2_CRX	ENST00000375544.3|ASPN|ENSG00000106819.7|asporin 	ENST00000375543.1|ASPN|ENSG00000106819.7|asporin 	ENST00000395538.3|ASPN|ENSG00000106819.7|asporin 	ENST00000450139.2|ASPN|ENSG00000106819.7|asporin
hg19_v2_chr2_+_128175997_128176020	0.230008	OTX2_CRX	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr2_+_120770581_120770608	0.229017	OTX2_CRX	ENST00000263713.5|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr2_-_175711133_175711158	0.225532	OTX2_CRX	ENST00000409597.1|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000413882.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr1_-_165414414_165414433	0.224364	OTX2_CRX	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chrX_-_101771645_101771712	0.206836	OTX2_CRX	ENST00000289373.4|TMSB15A|ENSG00000158164.6|thymosin beta 15a
hg19_v2_chr18_-_70532906_70532934	0.201262	OTX2_CRX	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr12_+_7941989_7942014	0.20118	OTX2_CRX	ENST00000229307.4|NANOG|ENSG00000111704.6|Nanog homeobox
hg19_v2_chr7_-_128415844_128415849	0.188287	OTX2_CRX	ENST00000249389.2|OPN1SW|ENSG00000128617.2|opsin 1 (cone pigments), short-wave-sensitive
hg19_v2_chr6_-_42690312_42690344	0.187752	OTX2_CRX	ENST00000230381.5|PRPH2|ENSG00000112619.6|peripherin 2 (retinal degeneration, slow)
hg19_v2_chr5_+_145718587_145718607	0.185017	OTX2_CRX	ENST00000230732.4|POU4F3|ENSG00000091010.4|POU class 4 homeobox 3
hg19_v2_chr5_-_88178964_88179012	0.180624	OTX2_CRX	ENST00000513252.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000508569.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000510942.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000506554.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr5_-_88179017_88179050	0.180466	OTX2_CRX	ENST00000514028.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000514015.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000503075.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C 	ENST00000437473.2|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr19_+_2476116_2476146	0.164554	OTX2_CRX	ENST00000215631.4|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta 	ENST00000587345.1|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta
hg19_v2_chr2_+_120770645_120770669	0.163736	OTX2_CRX	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr2_-_175499294_175499339	0.163354	OTX2_CRX	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr11_-_8680383_8680394	0.160173	OTX2_CRX	ENST00000299550.6|TRIM66|ENSG00000166436.11|tripartite motif containing 66
hg19_v2_chr5_-_149324306_149324362	0.152202	OTX2_CRX	ENST00000255266.5|PDE6A|ENSG00000132915.6|phosphodiesterase 6A, cGMP-specific, rod, alpha
hg19_v2_chr17_-_46690839_46690884	0.151897	OTX2_CRX	ENST00000498634.2|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr11_-_111794446_111794471	0.150896	OTX2_CRX	ENST00000527950.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr3_+_141105705_141105770	0.150028	OTX2_CRX	ENST00000513258.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr19_-_51538148_51538203	0.143609	OTX2_CRX	ENST00000319590.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12 	ENST00000250351.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr19_-_51538118_51538134	0.142275	OTX2_CRX	ENST00000529888.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr11_-_111783595_111783651	0.141327	OTX2_CRX	ENST00000528628.1|CRYAB|ENSG00000109846.3|crystallin, alpha B
hg19_v2_chr1_+_159409512_159409512	0.136778	OTX2_CRX	ENST00000423932.3|OR10J1|ENSG00000196184.7|olfactory receptor, family 10, subfamily J, member 1
hg19_v2_chr3_-_54962100_54962107	0.134955	OTX2_CRX	ENST00000273286.5|LRTM1|ENSG00000144771.7|leucine-rich repeats and transmembrane domains 1
hg19_v2_chr17_-_9808887_9808938	0.133508	OTX2_CRX	ENST00000226193.5|RCVRN|ENSG00000109047.7|recoverin
hg19_v2_chr8_-_25281747_25281779	0.12687	OTX2_CRX	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr16_-_31076332_31076409	0.12451	OTX2_CRX	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chrX_+_69488155_69488172	0.118773	OTX2_CRX	ENST00000374495.3|ARR3|ENSG00000120500.13|arrestin 3, retinal (X-arrestin)
hg19_v2_chr16_+_58010339_58010459	0.118083	OTX2_CRX	ENST00000290871.5|TEPP|ENSG00000159648.7|testis, prostate and placenta expressed 	ENST00000441824.2|TEPP|ENSG00000159648.7|testis, prostate and placenta expressed
hg19_v2_chr1_+_144989309_144989309	0.115508	OTX2_CRX	ENST00000596396.1|AL590452.1|ENSG00000268172.1|Uncharacterized protein
hg19_v2_chr6_-_31697563_31697598	0.113446	OTX2_CRX	ENST00000375789.2|DDAH2|ENSG00000213722.4|dimethylarginine dimethylaminohydrolase 2 	ENST00000416410.1|DDAH2|ENSG00000213722.4|dimethylarginine dimethylaminohydrolase 2
hg19_v2_chr14_-_101034407_101034487	0.111625	OTX2_CRX	ENST00000443071.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated 	ENST00000557378.1|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr9_-_20622478_20622542	0.110771	OTX2_CRX	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr3_+_69915385_69915438	0.110593	OTX2_CRX	ENST00000314589.5|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr13_-_33780133_33780168	0.109865	OTX2_CRX	ENST00000399365.3|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr9_+_18474098_18474160	0.108255	OTX2_CRX	ENST00000327883.7|ADAMTSL1|ENSG00000178031.11|ADAMTS-like 1 	ENST00000431052.2|ADAMTSL1|ENSG00000178031.11|ADAMTS-like 1 	ENST00000380570.4|ADAMTSL1|ENSG00000178031.11|ADAMTS-like 1
hg19_v2_chr1_+_164528866_164528877	0.105253	OTX2_CRX	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr16_-_31076273_31076290	0.105241	OTX2_CRX	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr1_+_18957500_18957623	0.100802	OTX2_CRX	ENST00000375375.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr2_-_119605253_119605264	0.0986445	OTX2_CRX	ENST00000295206.6|EN1|ENSG00000163064.6|engrailed homeobox 1
hg19_v2_chr1_-_241799232_241799232	0.0975806	OTX2_CRX	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr6_-_31697255_31697308	0.0954326	OTX2_CRX	ENST00000436437.1|DDAH2|ENSG00000213722.4|dimethylarginine dimethylaminohydrolase 2
hg19_v2_chr7_-_97881429_97881563	0.0940247	OTX2_CRX	ENST00000420697.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000379795.3|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000415086.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000542604.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000447648.2|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1
hg19_v2_chr10_+_95848824_95848852	0.0935753	OTX2_CRX	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr3_-_179692042_179692053	0.0927271	OTX2_CRX	ENST00000468741.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr17_-_48207157_48207246	0.0907405	OTX2_CRX	ENST00000330175.4|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14 	ENST00000503131.1|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14
hg19_v2_chr1_+_11751748_11751798	0.0899251	OTX2_CRX	ENST00000294485.5|DRAXIN|ENSG00000162490.6|dorsal inhibitory axon guidance protein
hg19_v2_chr3_-_190580404_190580450	0.0887652	OTX2_CRX	ENST00000442080.1|GMNC|ENSG00000205835.4|geminin coiled-coil domain containing
hg19_v2_chr9_-_13279563_13279584	0.0871093	OTX2_CRX	ENST00000541718.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr5_+_5140436_5140450	0.0833061	OTX2_CRX	ENST00000511368.1|ADAMTS16|ENSG00000145536.11|ADAM metallopeptidase with thrombospondin type 1 motif, 16 	ENST00000274181.7|ADAMTS16|ENSG00000145536.11|ADAM metallopeptidase with thrombospondin type 1 motif, 16
hg19_v2_chr7_+_90338712_90338907	0.0825757	OTX2_CRX	ENST00000265741.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14 	ENST00000406263.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chrX_+_79675965_79675965	0.0817964	OTX2_CRX	ENST00000308293.5|FAM46D|ENSG00000174016.7|family with sequence similarity 46, member D
hg19_v2_chr1_+_207277590_207277620	0.0809567	OTX2_CRX	ENST00000367070.3|C4BPA|ENSG00000123838.6|complement component 4 binding protein, alpha
hg19_v2_chr15_+_33603147_33603187	0.0804182	OTX2_CRX	ENST00000415757.3|RYR3|ENSG00000198838.7|ryanodine receptor 3 	ENST00000389232.4|RYR3|ENSG00000198838.7|ryanodine receptor 3
hg19_v2_chr3_+_63953415_63953430	0.0782995	OTX2_CRX	ENST00000484332.1|ATXN7|ENSG00000163635.13|ataxin 7
hg19_v2_chr5_-_149669192_149669323	0.0778319	OTX2_CRX	ENST00000398376.3|CAMK2A|ENSG00000070808.11|calcium/calmodulin-dependent protein kinase II alpha
hg19_v2_chr17_-_4689649_4689693	0.0778298	OTX2_CRX	ENST00000441199.2|VMO1|ENSG00000182853.7|vitelline membrane outer layer 1 homolog (chicken) 	ENST00000416307.2|VMO1|ENSG00000182853.7|vitelline membrane outer layer 1 homolog (chicken)
hg19_v2_chr10_-_62761188_62761212	0.0751876	OTX2_CRX	ENST00000357917.4|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr14_-_67981870_67981913	0.073089	OTX2_CRX	ENST00000555994.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr1_+_164529004_164529060	0.0717278	OTX2_CRX	ENST00000559240.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000367897.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000540236.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000401534.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr6_-_111804905_111804921	0.0706801	OTX2_CRX	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr7_-_128171123_128171144	0.0696948	OTX2_CRX	ENST00000608477.1|RP11-212P7.2|ENSG00000273270.1|RP11-212P7.2
hg19_v2_chr12_-_13248705_13248710	0.0691395	OTX2_CRX	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr10_+_103986085_103986085	0.0687362	OTX2_CRX	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chrX_+_15767971_15768093	0.0684288	OTX2_CRX	ENST00000479740.1|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial 	ENST00000454127.2|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial
hg19_v2_chr9_-_13279589_13279629	0.0675226	OTX2_CRX	ENST00000319217.7|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr14_-_22005018_22005040	0.0668166	OTX2_CRX	ENST00000546363.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr10_+_24528108_24528128	0.0664905	OTX2_CRX	ENST00000438429.1|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr12_-_13248732_13248744	0.0663315	OTX2_CRX	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr10_-_104178857_104178919	0.0661676	OTX2_CRX	ENST00000020673.5|PSD|ENSG00000059915.12|pleckstrin and Sec7 domain containing
hg19_v2_chr11_+_61522844_61522875	0.0643989	OTX2_CRX	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr6_+_155537771_155537868	0.0643842	OTX2_CRX	ENST00000275246.7|TIAM2|ENSG00000146426.13|T-cell lymphoma invasion and metastasis 2
hg19_v2_chr12_-_13248562_13248596	0.0635137	OTX2_CRX	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr7_-_100171270_100171270	0.0634663	OTX2_CRX	ENST00000538735.1|SAP25|ENSG00000205307.6|Sin3A-associated protein, 25kDa
hg19_v2_chr19_-_44124019_44124030	0.0626382	OTX2_CRX	ENST00000300811.3|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr4_+_70894130_70894188	0.0624991	OTX2_CRX	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chr12_+_133757995_133758114	0.0617633	OTX2_CRX	ENST00000536435.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000228289.5|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000541211.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000500625.3|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000539248.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000542711.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000536899.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000542986.2|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000537565.1|ZNF268|ENSG00000090612.16|zinc finger protein 268 	ENST00000541975.2|ZNF268|ENSG00000090612.16|zinc finger protein 268
hg19_v2_chr5_-_95768973_95768987	0.0612584	OTX2_CRX	ENST00000311106.3|PCSK1|ENSG00000175426.6|proprotein convertase subtilisin/kexin type 1
hg19_v2_chr11_+_20044096_20044116	0.0605486	OTX2_CRX	ENST00000533917.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr1_+_169079823_169079836	0.0602673	OTX2_CRX	ENST00000367813.3|ATP1B1|ENSG00000143153.8|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg19_v2_chr20_-_31124186_31124200	0.0598465	OTX2_CRX	ENST00000375678.3|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr3_+_129247479_129247493	0.0577	OTX2_CRX	ENST00000296271.3|RHO|ENSG00000163914.4|rhodopsin
hg19_v2_chr2_+_201170703_201170716	0.0571102	OTX2_CRX	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr19_+_11457175_11457224	0.0564527	OTX2_CRX	ENST00000458408.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000586451.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000588592.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr12_-_90049828_90049847	0.055159	OTX2_CRX	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr2_+_219472488_219472534	0.0547026	OTX2_CRX	ENST00000450993.2|PLCD4|ENSG00000115556.9|phospholipase C, delta 4
hg19_v2_chr9_+_75229616_75229616	0.0543981	OTX2_CRX	ENST00000340019.3|TMC1|ENSG00000165091.11|transmembrane channel-like 1
hg19_v2_chr19_-_59066452_59066496	0.053651	OTX2_CRX	ENST00000312547.2|CHMP2A|ENSG00000130724.4|charged multivesicular body protein 2A
hg19_v2_chr5_-_150138061_150138083	0.0533699	OTX2_CRX	ENST00000521533.1|DCTN4|ENSG00000132912.8|dynactin 4 (p62) 	ENST00000424236.1|DCTN4|ENSG00000132912.8|dynactin 4 (p62)
hg19_v2_chr12_-_90049878_90049890	0.0530599	OTX2_CRX	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr9_+_18474204_18474231	0.0530353	OTX2_CRX	ENST00000276935.6|ADAMTSL1|ENSG00000178031.11|ADAMTS-like 1
hg19_v2_chr11_-_128712362_128712429	0.0527141	OTX2_CRX	ENST00000392664.2|KCNJ1|ENSG00000151704.11|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v2_chr19_-_10121144_10121155	0.0526203	OTX2_CRX	ENST00000264828.3|COL5A3|ENSG00000080573.6|collagen, type V, alpha 3
hg19_v2_chr12_+_40787194_40787197	0.0519337	OTX2_CRX	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr10_-_49482907_49482941	0.0519207	OTX2_CRX	ENST00000374201.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2 	ENST00000407470.4|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr14_+_88471468_88471500	0.0508995	OTX2_CRX	ENST00000267549.3|GPR65|ENSG00000140030.4|G protein-coupled receptor 65
hg19_v2_chr3_-_50605077_50605140	0.0498174	OTX2_CRX	ENST00000426034.1|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18 	ENST00000441239.1|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18
hg19_v2_chr5_+_133451254_133451316	0.0492679	OTX2_CRX	ENST00000517851.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000521639.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000522375.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000378560.4|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000432532.2|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000520958.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000518915.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000395023.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box)
hg19_v2_chr13_-_49975632_49975735	0.0487033	OTX2_CRX	ENST00000457041.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000355854.4|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr10_+_18240834_18240897	0.0480074	OTX2_CRX	ENST00000377371.3|SLC39A12|ENSG00000148482.7|solute carrier family 39 (zinc transporter), member 12 	ENST00000539911.1|SLC39A12|ENSG00000148482.7|solute carrier family 39 (zinc transporter), member 12
hg19_v2_chr17_-_14683517_14683523	0.0474191	OTX2_CRX	ENST00000379640.1|AC005863.1|ENSG00000205325.1|AC005863.1
hg19_v2_chr12_-_53171128_53171131	0.0466293	OTX2_CRX	ENST00000332411.2|KRT76|ENSG00000185069.2|keratin 76
hg19_v2_chr3_-_149095652_149095652	0.0464313	OTX2_CRX	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr15_-_31453359_31453476	0.0462454	OTX2_CRX	ENST00000542188.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr4_+_129730947_129730999	0.0459064	OTX2_CRX	ENST00000452328.2|PHF17|ENSG00000077684.11|jade family PHD finger 1 	ENST00000504089.1|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr6_-_9933500_9933500	0.0455877	OTX2_CRX	ENST00000492169.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr1_-_117664317_117664414	0.0453119	OTX2_CRX	ENST00000256649.4|TRIM45|ENSG00000134253.5|tripartite motif containing 45 	ENST00000369464.3|TRIM45|ENSG00000134253.5|tripartite motif containing 45 	ENST00000485032.1|TRIM45|ENSG00000134253.5|tripartite motif containing 45
hg19_v2_chr4_+_154125565_154125626	0.0452814	OTX2_CRX	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr11_+_72975559_72975565	0.0452405	OTX2_CRX	ENST00000349767.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr3_-_50605150_50605212	0.0447009	OTX2_CRX	ENST00000357203.3|C3orf18|ENSG00000088543.10|chromosome 3 open reading frame 18
hg19_v2_chr5_+_173316341_173316363	0.0443924	OTX2_CRX	ENST00000520867.1|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4 	ENST00000334035.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr14_+_23846328_23846461	0.042973	OTX2_CRX	ENST00000382809.2|CMTM5|ENSG00000166091.15|CKLF-like MARVEL transmembrane domain containing 5
hg19_v2_chr22_-_38380543_38380569	0.0428659	OTX2_CRX	ENST00000396884.2|SOX10|ENSG00000100146.12|SRY (sex determining region Y)-box 10
hg19_v2_chr1_+_20396649_20396705	0.0421288	OTX2_CRX	ENST00000375108.3|PLA2G5|ENSG00000127472.6|phospholipase A2, group V
hg19_v2_chr20_+_4702548_4702565	0.0416464	OTX2_CRX	ENST00000305817.2|PRND|ENSG00000171864.4|prion protein 2 (dublet)
hg19_v2_chr2_-_121223697_121223697	0.0411644	OTX2_CRX	ENST00000593290.1|FLJ14816|ENSG00000268194.1|long intergenic non-protein coding RNA 1101
hg19_v2_chr11_+_72975524_72975557	0.041069	OTX2_CRX	ENST00000540342.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6 	ENST00000542092.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr15_+_58430368_58430401	0.0410385	OTX2_CRX	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr11_+_72975578_72975584	0.0408496	OTX2_CRX	ENST00000393592.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr9_+_82188077_82188177	0.0402715	OTX2_CRX	ENST00000425506.1|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr1_-_146082633_146082765	0.0399499	OTX2_CRX	ENST00000605317.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000604938.1|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11 	ENST00000339388.5|NBPF11|ENSG00000152042.13|neuroblastoma breakpoint family, member 11
hg19_v2_chr19_-_44123734_44123796	0.0397383	OTX2_CRX	ENST00000598676.1|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr9_+_17134980_17134994	0.0397151	OTX2_CRX	ENST00000380647.3|CNTLN|ENSG00000044459.10|centlein, centrosomal protein
hg19_v2_chr11_-_67290867_67290920	0.0395381	OTX2_CRX	ENST00000353903.5|CABP2|ENSG00000167791.7|calcium binding protein 2 	ENST00000294288.4|CABP2|ENSG00000167791.7|calcium binding protein 2
hg19_v2_chr8_-_10512569_10512612	0.0391598	OTX2_CRX	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr3_-_186262166_186262240	0.0391048	OTX2_CRX	ENST00000307944.5|CRYGS|ENSG00000213139.3|crystallin, gamma S
hg19_v2_chr19_+_46001697_46001865	0.0388848	OTX2_CRX	ENST00000451287.2|PPM1N|ENSG00000213889.6|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative) 	ENST00000324688.4|PPM1N|ENSG00000213889.6|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
hg19_v2_chr10_+_18240753_18240768	0.0388757	OTX2_CRX	ENST00000377369.2|SLC39A12|ENSG00000148482.7|solute carrier family 39 (zinc transporter), member 12
hg19_v2_chr11_+_67222818_67222829	0.0384541	OTX2_CRX	ENST00000325656.5|CABP4|ENSG00000175544.9|calcium binding protein 4
hg19_v2_chr3_+_191046810_191046874	0.0373144	OTX2_CRX	ENST00000392455.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50 	ENST00000392456.3|CCDC50|ENSG00000152492.9|coiled-coil domain containing 50
hg19_v2_chr10_+_18240814_18240829	0.0372255	OTX2_CRX	ENST00000377374.4|SLC39A12|ENSG00000148482.7|solute carrier family 39 (zinc transporter), member 12
hg19_v2_chr7_+_28452130_28452154	0.0369911	OTX2_CRX	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr4_+_129730779_129730826	0.0368028	OTX2_CRX	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr1_+_151682909_151682909	0.036505	OTX2_CRX	ENST00000326413.3|RIIAD1|ENSG00000178796.8|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 	ENST00000442233.2|AL589765.1|ENSG00000240510.2|Uncharacterized protein; cDNA FLJ36032 fis, clone TESTI2017069
hg19_v2_chr10_+_134150835_134150852	0.0363536	OTX2_CRX	ENST00000432555.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr1_-_173174681_173174702	0.036247	OTX2_CRX	ENST00000367718.1|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr2_+_170366203_170366225	0.0359745	OTX2_CRX	ENST00000284669.1|KLHL41|ENSG00000239474.2|kelch-like family member 41
hg19_v2_chr11_-_30608413_30608423	0.035957	OTX2_CRX	ENST00000528686.1|MPPED2|ENSG00000066382.12|metallophosphoesterase domain containing 2
hg19_v2_chr12_-_7848364_7848378	0.0356439	OTX2_CRX	ENST00000329913.3|GDF3|ENSG00000184344.3|growth differentiation factor 3
hg19_v2_chr5_+_161494521_161494557	0.0353757	OTX2_CRX	ENST00000356592.3|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr6_+_54173227_54173371	0.0353253	OTX2_CRX	ENST00000259782.4|TINAG|ENSG00000137251.11|tubulointerstitial nephritis antigen 	ENST00000370864.3|TINAG|ENSG00000137251.11|tubulointerstitial nephritis antigen
hg19_v2_chr18_+_29769978_29769989	0.0347416	OTX2_CRX	ENST00000269202.6|MEP1B|ENSG00000141434.7|meprin A, beta 	ENST00000581447.1|MEP1B|ENSG00000141434.7|meprin A, beta
hg19_v2_chr10_-_65028817_65028828	0.0339761	OTX2_CRX	ENST00000542921.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr6_+_111580508_111580575	0.0339347	OTX2_CRX	ENST00000368847.4|KIAA1919|ENSG00000173214.5|KIAA1919
hg19_v2_chr15_+_58430567_58430589	0.0336647	OTX2_CRX	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr3_-_137851220_137851236	0.0328551	OTX2_CRX	ENST00000236709.3|A4GNT|ENSG00000118017.3|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr8_-_114449112_114449328	0.0328032	OTX2_CRX	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr15_-_74495188_74495220	0.032677	OTX2_CRX	ENST00000563965.1|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6 	ENST00000395105.4|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr10_-_65028938_65028989	0.0322908	OTX2_CRX	ENST00000402544.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr9_+_34179003_34179064	0.032124	OTX2_CRX	ENST00000545103.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000543944.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000536252.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000540348.1|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000297661.4|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1 	ENST00000379186.4|UBAP1|ENSG00000165006.9|ubiquitin associated protein 1
hg19_v2_chrX_+_153409678_153409698	0.0313583	OTX2_CRX	ENST00000369951.4|OPN1LW|ENSG00000102076.5|opsin 1 (cone pigments), long-wave-sensitive
hg19_v2_chr15_+_54901540_54901540	0.0307434	OTX2_CRX	ENST00000539562.2|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr1_-_53608249_53608288	0.0298472	OTX2_CRX	ENST00000371494.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr1_-_102312517_102312566	0.0296586	OTX2_CRX	ENST00000338858.5|OLFM3|ENSG00000118733.12|olfactomedin 3
hg19_v2_chr17_-_39661849_39661871	0.0287598	OTX2_CRX	ENST00000246635.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000336861.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587544.1|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587435.1|KRT13|ENSG00000171401.10|keratin 13
hg19_v2_chr3_-_9291063_9291136	0.0286901	OTX2_CRX	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chrM_+_9207_9255	0.0277262	OTX2_CRX	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr21_-_35016231_35016246	0.0273861	OTX2_CRX	ENST00000438788.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1
hg19_v2_chrX_+_100645812_100646008	0.0272967	OTX2_CRX	ENST00000427805.2|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000553110.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000392994.3|RPL36A|ENSG00000241343.5|ribosomal protein L36a 	ENST00000409338.1|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough 	ENST00000409170.3|RPL36A-HNRNPH2|ENSG00000257529.1|RPL36A-HNRNPH2 readthrough
hg19_v2_chr13_+_36050881_36050887	0.0272919	OTX2_CRX	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr13_+_31191920_31192005	0.0270797	OTX2_CRX	ENST00000255304.4|USPL1|ENSG00000132952.7|ubiquitin specific peptidase like 1
hg19_v2_chr19_-_51537982_51537997	0.0269983	OTX2_CRX	ENST00000525263.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr17_-_55822653_55822673	0.0263659	OTX2_CRX	ENST00000299415.2|AC007431.1|ENSG00000166329.2|coiled-coil domain containing 182
hg19_v2_chr15_+_96869165_96869183	0.0263576	OTX2_CRX	ENST00000421109.2|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr3_-_170626418_170626482	0.026052	OTX2_CRX	ENST00000474096.1|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2 	ENST00000295822.2|EIF5A2|ENSG00000163577.3|eukaryotic translation initiation factor 5A2
hg19_v2_chr1_+_26644441_26644455	0.025573	OTX2_CRX	ENST00000374213.2|CD52|ENSG00000169442.4|CD52 molecule
hg19_v2_chr5_+_63461642_63461722	0.0254163	OTX2_CRX	ENST00000296615.6|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000381081.2|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000389100.4|RNF180|ENSG00000164197.7|ring finger protein 180
hg19_v2_chr1_-_151965048_151965062	0.0249946	OTX2_CRX	ENST00000368809.1|S100A10|ENSG00000197747.4|S100 calcium binding protein A10
hg19_v2_chr10_-_48390973_48391010	0.0246429	OTX2_CRX	ENST00000224600.4|RBP3|ENSG00000107618.4|retinol binding protein 3, interstitial
hg19_v2_chr16_-_58004992_58005021	0.0242274	OTX2_CRX	ENST00000564448.1|CNGB1|ENSG00000070729.9|cyclic nucleotide gated channel beta 1 	ENST00000251102.8|CNGB1|ENSG00000070729.9|cyclic nucleotide gated channel beta 1 	ENST00000311183.4|CNGB1|ENSG00000070729.9|cyclic nucleotide gated channel beta 1
hg19_v2_chr5_+_161494770_161494787	0.023141	OTX2_CRX	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr19_+_18208603_18208614	0.0230493	OTX2_CRX	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr15_-_31453157_31453308	0.0230333	OTX2_CRX	ENST00000559177.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000558445.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr19_-_48547294_48547342	0.0230297	OTX2_CRX	ENST00000293255.2|CABP5|ENSG00000105507.2|calcium binding protein 5
hg19_v2_chrX_+_100646190_100646266	0.0225618	OTX2_CRX	ENST00000471855.1|RPL36A|ENSG00000241343.5|ribosomal protein L36a
hg19_v2_chr15_+_79603404_79603475	0.0224492	OTX2_CRX	ENST00000299705.5|TMED3|ENSG00000166557.8|transmembrane emp24 protein transport domain containing 3
hg19_v2_chr4_+_129730839_129730904	0.0215843	OTX2_CRX	ENST00000511647.1|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr13_-_62001982_62001982	0.0213397	OTX2_CRX	ENST00000409186.1|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr2_+_183943464_183943498	0.0212686	OTX2_CRX	ENST00000354221.4|DUSP19|ENSG00000162999.8|dual specificity phosphatase 19
hg19_v2_chr1_+_202431859_202431871	0.0212485	OTX2_CRX	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr10_-_94003003_94003013	0.0206981	OTX2_CRX	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr20_-_34330129_34330234	0.0204771	OTX2_CRX	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr3_+_130650738_130650888	0.0204489	OTX2_CRX	ENST00000504612.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr22_-_41258074_41258130	0.020035	OTX2_CRX	ENST00000307221.4|DNAJB7|ENSG00000172404.4|DnaJ (Hsp40) homolog, subfamily B, member 7
hg19_v2_chr1_+_87380299_87380475	0.0199872	OTX2_CRX	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr2_-_30144432_30144457	0.0199205	OTX2_CRX	ENST00000389048.3|ALK|ENSG00000171094.11|anaplastic lymphoma receptor tyrosine kinase
hg19_v2_chr6_-_139613269_139613280	0.019791	OTX2_CRX	ENST00000358430.3|TXLNB|ENSG00000164440.10|taxilin beta
hg19_v2_chr6_+_35310391_35310410	0.0197821	OTX2_CRX	ENST00000337400.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000311565.4|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000540939.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr12_+_58138800_58138860	0.0197454	OTX2_CRX	ENST00000547992.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000552816.1|TSPAN31|ENSG00000135452.5|tetraspanin 31 	ENST00000547472.1|TSPAN31|ENSG00000135452.5|tetraspanin 31
hg19_v2_chr2_+_55746722_55746740	0.019727	OTX2_CRX	ENST00000339012.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104
hg19_v2_chr22_-_19137796_19137796	0.0191287	OTX2_CRX	ENST00000086933.2|GSC2|ENSG00000063515.2|goosecoid homeobox 2
hg19_v2_chrX_+_129473916_129474026	0.018849	OTX2_CRX	ENST00000545805.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000543953.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000218197.5|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr1_-_21606013_21606059	0.0183144	OTX2_CRX	ENST00000357071.4|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr20_-_49307897_49307917	0.0180635	OTX2_CRX	ENST00000535356.1|FAM65C|ENSG00000042062.7|family with sequence similarity 65, member C
hg19_v2_chr12_+_85673868_85673885	0.0177998	OTX2_CRX	ENST00000316824.3|ALX1|ENSG00000180318.3|ALX homeobox 1
hg19_v2_chr15_+_93443419_93443580	0.0177508	OTX2_CRX	ENST00000557381.1|CHD2|ENSG00000173575.14|chromodomain helicase DNA binding protein 2 	ENST00000420239.2|CHD2|ENSG00000173575.14|chromodomain helicase DNA binding protein 2
hg19_v2_chr12_+_58138664_58138789	0.0174895	OTX2_CRX	ENST00000257910.3|TSPAN31|ENSG00000135452.5|tetraspanin 31
hg19_v2_chr12_+_104697504_104697585	0.0165791	OTX2_CRX	ENST00000527879.1|EID3|ENSG00000255150.1|EP300 interacting inhibitor of differentiation 3
hg19_v2_chr3_+_137483579_137483579	0.0159642	OTX2_CRX	ENST00000306087.1|SOX14|ENSG00000168875.1|SRY (sex determining region Y)-box 14
hg19_v2_chr18_-_43678241_43678319	0.0158368	OTX2_CRX	ENST00000593152.2|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000589252.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000590665.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000398752.6|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr7_+_80231466_80231529	0.0155785	OTX2_CRX	ENST00000309881.7|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000534394.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr3_+_173302222_173302345	0.0155625	OTX2_CRX	ENST00000361589.4|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr22_+_25615489_25615544	0.015372	OTX2_CRX	ENST00000398215.2|CRYBB2|ENSG00000244752.2|crystallin, beta B2
hg19_v2_chr12_-_67197760_67198052	0.0150496	OTX2_CRX	ENST00000539540.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000540433.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000541947.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538373.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr2_-_214016314_214016343	0.0149643	OTX2_CRX	ENST00000434687.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000374319.4|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr12_-_14849470_14849540	0.0146347	OTX2_CRX	ENST00000261170.3|GUCY2C|ENSG00000070019.3|guanylate cyclase 2C (heat stable enterotoxin receptor)
hg19_v2_chr10_+_102505468_102505546	0.0143684	OTX2_CRX	ENST00000361791.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000355243.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000428433.1|PAX2|ENSG00000075891.17|paired box 2 	ENST00000370296.2|PAX2|ENSG00000075891.17|paired box 2
hg19_v2_chr21_+_17443521_17443553	0.0142485	OTX2_CRX	ENST00000456342.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr15_-_52483566_52483575	0.0137825	OTX2_CRX	ENST00000261837.7|GNB5|ENSG00000069966.14|guanine nucleotide binding protein (G protein), beta 5
hg19_v2_chr21_+_33245548_33245628	0.01334	OTX2_CRX	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr8_-_145701718_145701718	0.0132908	OTX2_CRX	ENST00000377317.4|FOXH1|ENSG00000160973.7|forkhead box H1
hg19_v2_chr10_+_95372289_95372345	0.0127751	OTX2_CRX	ENST00000371447.3|PDE6C|ENSG00000095464.9|phosphodiesterase 6C, cGMP-specific, cone, alpha prime
hg19_v2_chr9_+_103204553_103204560	0.0123783	OTX2_CRX	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr2_+_201170596_201170619	0.0121292	OTX2_CRX	ENST00000439084.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000409718.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chrX_+_135279179_135279192	0.0119106	OTX2_CRX	ENST00000370676.3|FHL1|ENSG00000022267.12|four and a half LIM domains 1
hg19_v2_chr14_-_36789865_36789886	0.0118775	OTX2_CRX	ENST00000416007.4|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1
hg19_v2_chr11_-_130184555_130184581	0.0116082	OTX2_CRX	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr17_-_40264692_40264753	0.0111608	OTX2_CRX	ENST00000591220.1|DHX58|ENSG00000108771.8|DEXH (Asp-Glu-X-His) box polypeptide 58 	ENST00000251642.3|DHX58|ENSG00000108771.8|DEXH (Asp-Glu-X-His) box polypeptide 58
hg19_v2_chr14_-_36789783_36789860	0.0109906	OTX2_CRX	ENST00000605579.1|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1 	ENST00000604336.1|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1 	ENST00000359527.7|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1 	ENST00000603139.1|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1 	ENST00000318473.7|MBIP|ENSG00000151332.14|MAP3K12 binding inhibitory protein 1
hg19_v2_chr7_+_93535817_93535822	0.0108184	OTX2_CRX	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr7_+_73868220_73868300	0.010601	OTX2_CRX	ENST00000455841.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr6_+_34433844_34433921	0.0104915	OTX2_CRX	ENST00000244458.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1 	ENST00000374043.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1
hg19_v2_chr6_+_31554826_31554894	0.0104666	OTX2_CRX	ENST00000376089.2|LST1|ENSG00000204482.6|leukocyte specific transcript 1 	ENST00000396112.2|LST1|ENSG00000204482.6|leukocyte specific transcript 1
hg19_v2_chr6_-_30658745_30658786	0.0102344	OTX2_CRX	ENST00000376420.5|NRM|ENSG00000137404.10|nurim (nuclear envelope membrane protein) 	ENST00000376421.5|NRM|ENSG00000137404.10|nurim (nuclear envelope membrane protein)
hg19_v2_chr17_-_71640227_71640228	0.0102006	OTX2_CRX	ENST00000388726.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2 	ENST00000392650.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2
hg19_v2_chr1_-_224033596_224033697	0.00987647	OTX2_CRX	ENST00000391878.2|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2 	ENST00000343537.7|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2
hg19_v2_chr10_+_52751010_52751118	0.00964096	OTX2_CRX	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr6_+_35310312_35310359	0.00960355	OTX2_CRX	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr6_-_30899924_30899954	0.0094937	OTX2_CRX	ENST00000359086.3|SFTA2|ENSG00000196260.3|surfactant associated 2
hg19_v2_chr12_-_13248598_13248630	0.00926736	OTX2_CRX	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chrX_-_153363188_153363212	0.00912124	OTX2_CRX	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr18_-_64271316_64271334	0.00859044	OTX2_CRX	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr10_+_35464513_35464631	0.00857855	OTX2_CRX	ENST00000494479.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463314.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000342105.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000495301.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463960.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr16_+_8715536_8715572	0.00752791	OTX2_CRX	ENST00000563958.1|METTL22|ENSG00000067365.10|methyltransferase like 22 	ENST00000381920.3|METTL22|ENSG00000067365.10|methyltransferase like 22 	ENST00000564554.1|METTL22|ENSG00000067365.10|methyltransferase like 22
hg19_v2_chr3_+_49059038_49059067	0.00722735	OTX2_CRX	ENST00000451378.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr7_+_73868439_73868450	0.00708317	OTX2_CRX	ENST00000424337.2|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr10_-_69455873_69455960	0.00694696	OTX2_CRX	ENST00000433211.2|CTNNA3|ENSG00000183230.12|catenin (cadherin-associated protein), alpha 3
hg19_v2_chr1_-_13452656_13452656	0.00689174	OTX2_CRX	ENST00000376132.3|PRAMEF13|ENSG00000204495.3|PRAME family member 13
hg19_v2_chr11_-_118436707_118436791	0.00678068	OTX2_CRX	ENST00000264020.2|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas) 	ENST00000264021.3|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas)
hg19_v2_chr12_-_110937351_110937445	0.00668151	OTX2_CRX	ENST00000552130.2|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v2_chr1_+_153651078_153651140	0.00653682	OTX2_CRX	ENST00000368680.3|NPR1|ENSG00000169418.9|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)
hg19_v2_chr11_-_118436606_118436664	0.00623304	OTX2_CRX	ENST00000530872.1|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas)
hg19_v2_chrX_+_135278908_135278932	0.00620296	OTX2_CRX	ENST00000539015.1|FHL1|ENSG00000022267.12|four and a half LIM domains 1 	ENST00000370683.1|FHL1|ENSG00000022267.12|four and a half LIM domains 1
hg19_v2_chr13_-_52027134_52027343	0.00618294	OTX2_CRX	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr12_+_53693466_53693537	0.00542797	OTX2_CRX	ENST00000267103.5|C12orf10|ENSG00000139637.9|chromosome 12 open reading frame 10 	ENST00000548632.1|C12orf10|ENSG00000139637.9|chromosome 12 open reading frame 10
hg19_v2_chr9_-_139361503_139361503	0.00484861	OTX2_CRX	ENST00000453963.1|SEC16A|ENSG00000148396.14|SEC16 homolog A (S. cerevisiae)
hg19_v2_chr20_-_18774614_18774644	0.00480438	OTX2_CRX	ENST00000412553.1|LINC00652|ENSG00000179935.5|long intergenic non-protein coding RNA 652
hg19_v2_chr5_-_24645078_24645096	0.00399962	OTX2_CRX	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr21_+_17443434_17443515	0.00385702	OTX2_CRX	ENST00000400178.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr17_+_48911942_48912011	0.00359033	OTX2_CRX	ENST00000426127.1|WFIKKN2|ENSG00000173714.7|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
hg19_v2_chr3_+_130279178_130279178	0.00329887	OTX2_CRX	ENST00000358511.6|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6 	ENST00000453409.2|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6
hg19_v2_chr19_-_11457162_11457194	0.00329316	OTX2_CRX	ENST00000590482.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr18_+_616711_616720	0.00318551	OTX2_CRX	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr12_+_81101277_81101321	0.00316586	OTX2_CRX	ENST00000228641.3|MYF6|ENSG00000111046.3|myogenic factor 6 (herculin)
hg19_v2_chr10_+_70661014_70661090	0.00282733	OTX2_CRX	ENST00000373585.3|DDX50|ENSG00000107625.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
hg19_v2_chr10_-_74114714_74114988	0.00253544	OTX2_CRX	ENST00000338820.3|DNAJB12|ENSG00000148719.10|DnaJ (Hsp40) homolog, subfamily B, member 12 	ENST00000394903.2|DNAJB12|ENSG00000148719.10|DnaJ (Hsp40) homolog, subfamily B, member 12 	ENST00000444643.2|DNAJB12|ENSG00000148719.10|DnaJ (Hsp40) homolog, subfamily B, member 12
hg19_v2_chr17_-_46692287_46692317	0.00232781	OTX2_CRX	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr10_-_74714533_74714580	0.00210114	OTX2_CRX	ENST00000373032.3|PLA2G12B|ENSG00000138308.5|phospholipase A2, group XIIB
hg19_v2_chrX_-_10588595_10588674	0.00195009	OTX2_CRX	ENST00000423614.1|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome) 	ENST00000317552.4|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr7_+_73868120_73868216	0.00184196	OTX2_CRX	ENST00000265755.3|GTF2IRD1|ENSG00000006704.6|GTF2I repeat domain containing 1
hg19_v2_chr11_+_101983176_101983245	0.00159701	OTX2_CRX	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr1_-_53608289_53608315	0.00118555	OTX2_CRX	ENST00000371491.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr8_+_54764346_54764460	0.00110415	OTX2_CRX	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chr16_+_81272287_81272303	0.00109814	OTX2_CRX	ENST00000425577.2|BCMO1|ENSG00000135697.5|beta-carotene 15,15'-monooxygenase 1 	ENST00000564552.1|BCMO1|ENSG00000135697.5|beta-carotene 15,15'-monooxygenase 1
hg19_v2_chr9_+_18474163_18474202	0.00103324	OTX2_CRX	ENST00000380566.4|ADAMTSL1|ENSG00000178031.11|ADAMTS-like 1
hg19_v2_chr9_+_17135016_17135063	0.000936193	OTX2_CRX	ENST00000425824.1|CNTLN|ENSG00000044459.10|centlein, centrosomal protein 	ENST00000262360.5|CNTLN|ENSG00000044459.10|centlein, centrosomal protein 	ENST00000380641.4|CNTLN|ENSG00000044459.10|centlein, centrosomal protein
hg19_v2_chr18_-_35145593_35145614	0.000874269	OTX2_CRX	ENST00000334919.5|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000591282.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000588597.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4
hg19_v2_chr18_-_35145689_35145718	0.000543135	OTX2_CRX	ENST00000591287.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000601019.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000601392.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4
hg19_v2_chrX_-_10588459_10588482	0.000487939	OTX2_CRX	ENST00000380782.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr7_+_123295861_123295926	0.000468557	OTX2_CRX	ENST00000458573.2|LMOD2|ENSG00000170807.11|leiomodin 2 (cardiac) 	ENST00000456238.2|LMOD2|ENSG00000170807.11|leiomodin 2 (cardiac)
hg19_v2_chr12_+_53693812_53693877	0.000348254	OTX2_CRX	ENST00000549488.1|C12orf10|ENSG00000139637.9|chromosome 12 open reading frame 10
hg19_v2_chrY_+_16634483_16634632	0.000113587	OTX2_CRX	ENST00000382872.1|NLGN4Y|ENSG00000165246.8|neuroligin 4, Y-linked
