hg19_v2_chr10_+_85933494_85933568	0.185602	PAX8	ENST00000372126.3|C10orf99|ENSG00000188373.4|chromosome 10 open reading frame 99
hg19_v2_chr3_-_189840223_189840229	0.141074	PAX8	ENST00000427335.2|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr6_+_41196077_41196088	0.135394	PAX8	ENST00000448827.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr6_+_41196052_41196063	0.135262	PAX8	ENST00000341495.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr19_-_35992780_35992815	0.119737	PAX8	ENST00000593342.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000601650.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000408915.2|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr3_-_169587621_169587728	0.113663	PAX8	ENST00000523069.1|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000316428.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000264676.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31
hg19_v2_chr1_-_21059029_21059330	0.109875	PAX8	ENST00000444387.2|SH2D5|ENSG00000189410.7|SH2 domain containing 5 	ENST00000375031.1|SH2D5|ENSG00000189410.7|SH2 domain containing 5 	ENST00000518294.1|SH2D5|ENSG00000189410.7|SH2 domain containing 5
hg19_v2_chr2_+_17721230_17721255	0.108773	PAX8	ENST00000457525.1|VSNL1|ENSG00000163032.7|visinin-like 1
hg19_v2_chr8_-_57233103_57233335	0.101782	PAX8	ENST00000303749.3|SDR16C5|ENSG00000170786.8|short chain dehydrogenase/reductase family 16C, member 5 	ENST00000522671.1|SDR16C5|ENSG00000170786.8|short chain dehydrogenase/reductase family 16C, member 5
hg19_v2_chr1_-_153514241_153514241	0.100943	PAX8	ENST00000368718.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5 	ENST00000359215.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr9_+_27109392_27109435	0.0991294	PAX8	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr1_-_186649543_186649563	0.0986996	PAX8	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr5_+_140248518_140248689	0.0872248	PAX8	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr6_+_43739697_43739752	0.0840633	PAX8	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr11_-_58343319_58343338	0.0825935	PAX8	ENST00000395074.2|LPXN|ENSG00000110031.8|leupaxin
hg19_v2_chr7_+_129984630_129984701	0.0757955	PAX8	ENST00000355388.3|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000497503.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000463587.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000461828.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000494311.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000466363.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000485477.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000431780.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000474905.1|CPA5|ENSG00000158525.11|carboxypeptidase A5
hg19_v2_chr4_-_46911223_46911230	0.0750861	PAX8	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr17_-_34257731_34257766	0.0733592	PAX8	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr12_-_9360966_9360996	0.0708154	PAX8	ENST00000261336.2|PZP|ENSG00000126838.5|pregnancy-zone protein
hg19_v2_chr17_-_39646116_39646164	0.0702768	PAX8	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr5_+_55147205_55147334	0.0691266	PAX8	ENST00000396836.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000396834.1|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000447346.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000359040.5|IL31RA|ENSG00000164509.9|interleukin 31 receptor A
hg19_v2_chr1_-_184006829_184006911	0.0687263	PAX8	ENST00000361927.4|COLGALT2|ENSG00000198756.6|collagen beta(1-O)galactosyltransferase 2
hg19_v2_chr22_+_21128167_21128167	0.0681095	PAX8	ENST00000215727.5|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr19_-_51487282_51487346	0.0654304	PAX8	ENST00000595820.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000597707.1|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7 	ENST00000336317.4|KLK7|ENSG00000169035.7|kallikrein-related peptidase 7
hg19_v2_chr7_-_97501706_97501727	0.0651456	PAX8	ENST00000455086.1|ASNS|ENSG00000070669.12|asparagine synthetase (glutamine-hydrolyzing) 	ENST00000453600.1|ASNS|ENSG00000070669.12|asparagine synthetase (glutamine-hydrolyzing)
hg19_v2_chr17_-_34257771_34257786	0.0617297	PAX8	ENST00000394529.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000293273.6|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr17_+_7461613_7461645	0.0616103	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr12_-_10251539_10251560	0.0607781	PAX8	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr1_+_182419261_182419285	0.0603822	PAX8	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr12_+_57828521_57828543	0.0597301	PAX8	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr6_-_32784687_32784839	0.0591289	PAX8	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr19_+_50169081_50169196	0.0591198	PAX8	ENST00000246784.3|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr19_-_52133588_52133588	0.0584127	PAX8	ENST00000570106.2|SIGLEC5|ENSG00000105501.7|sialic acid binding Ig-like lectin 5
hg19_v2_chr6_+_71276596_71276649	0.0582267	PAX8	ENST00000370474.3|C6orf57|ENSG00000154079.5|chromosome 6 open reading frame 57
hg19_v2_chr12_+_26348582_26348606	0.0554076	PAX8	ENST00000535504.1|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr11_+_64323156_64323165	0.0553095	PAX8	ENST00000377585.3|SLC22A11|ENSG00000168065.11|solute carrier family 22 (organic anion/urate transporter), member 11
hg19_v2_chr2_+_85661918_85661918	0.0548659	PAX8	ENST00000340326.2|SH2D6|ENSG00000152292.12|SH2 domain containing 6
hg19_v2_chr8_-_21771182_21771208	0.0543226	PAX8	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr4_-_89951028_89951062	0.0535458	PAX8	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr1_-_59012365_59012474	0.0531177	PAX8	ENST00000456980.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000482274.2|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000453710.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000419242.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000358603.2|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000371226.3|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase 	ENST00000426139.1|OMA1|ENSG00000162600.7|OMA1 zinc metallopeptidase
hg19_v2_chr6_+_117198400_117198441	0.0516276	PAX8	ENST00000332958.2|RFX6|ENSG00000185002.5|regulatory factor X, 6
hg19_v2_chr3_-_111852128_111852152	0.0507008	PAX8	ENST00000308910.4|GCSAM|ENSG00000174500.8|germinal center-associated, signaling and motility
hg19_v2_chr8_-_66474884_66475015	0.0492162	PAX8	ENST00000520902.1|CTD-3025N20.2|ENSG00000254081.1|CTD-3025N20.2
hg19_v2_chr17_-_60883993_60884014	0.0482338	PAX8	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr14_+_22458631_22458735	0.0482003	PAX8	ENST00000390444.1|TRAV16|ENSG00000211796.1|T cell receptor alpha variable 16
hg19_v2_chr10_+_24738355_24738380	0.0477545	PAX8	ENST00000307544.6|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr19_+_35939154_35939203	0.0477089	PAX8	ENST00000599180.2|FFAR2|ENSG00000126262.4|free fatty acid receptor 2
hg19_v2_chr8_+_31496809_31496902	0.0471716	PAX8	ENST00000518104.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000519301.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr1_-_153013588_153013605	0.0468493	PAX8	ENST00000360379.3|SPRR2D|ENSG00000163216.6|small proline-rich protein 2D
hg19_v2_chr18_-_10748498_10748498	0.0456305	PAX8	ENST00000579949.1|PIEZO2|ENSG00000154864.7|piezo-type mechanosensitive ion channel component 2
hg19_v2_chr6_+_135502466_135502489	0.0454508	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr4_+_80748619_80748630	0.0444333	PAX8	ENST00000504263.1|PCAT4|ENSG00000251321.1|prostate cancer associated transcript 4 (non-protein coding)
hg19_v2_chr10_+_103912137_103912172	0.0437743	PAX8	ENST00000603742.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000488254.2|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000461421.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000476468.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000370007.5|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1
hg19_v2_chr16_+_2083265_2083303	0.0435521	PAX8	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr4_-_75695366_75695366	0.0435402	PAX8	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chr4_+_120860695_120860722	0.0424506	PAX8	ENST00000505122.2|RP11-700N1.1|ENSG00000250392.2|RP11-700N1.1
hg19_v2_chr4_+_36283213_36283256	0.0417957	PAX8	ENST00000357504.3|DTHD1|ENSG00000197057.4|death domain containing 1
hg19_v2_chrX_-_151938171_151938240	0.0404268	PAX8	ENST00000393902.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000417212.1|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000370278.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3
hg19_v2_chr6_+_135502408_135502459	0.0396293	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr19_+_50169216_50169285	0.0395048	PAX8	ENST00000594157.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000600947.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000598306.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr9_-_21239978_21239978	0.0389301	PAX8	ENST00000380222.2|IFNA14|ENSG00000228083.1|interferon, alpha 14
hg19_v2_chr9_+_706842_706889	0.0389108	PAX8	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chrX_-_153141302_153141399	0.038615	PAX8	ENST00000361699.4|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000543994.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000370057.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000538883.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000361981.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr6_-_44233361_44233500	0.0379678	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr3_-_38835501_38835501	0.0378717	PAX8	ENST00000449082.2|SCN10A|ENSG00000185313.6|sodium channel, voltage-gated, type X, alpha subunit
hg19_v2_chr19_+_17865011_17865123	0.0374925	PAX8	ENST00000596462.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596865.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598960.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000539407.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr7_-_142176790_142176842	0.037147	PAX8	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4 (gene/pseudogene)
hg19_v2_chr17_+_7462031_7462086	0.0371208	PAX8	ENST00000380535.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr6_+_14117872_14118012	0.0370714	PAX8	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chr18_-_53068911_53068935	0.0369808	PAX8	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr11_-_62609281_62609282	0.0369107	PAX8	ENST00000525239.1|WDR74|ENSG00000133316.11|WD repeat domain 74 	ENST00000538098.2|WDR74|ENSG00000133316.11|WD repeat domain 74
hg19_v2_chr11_+_65292538_65292606	0.0365782	PAX8	ENST00000270176.5|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000525364.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000420247.2|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000533862.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000279270.6|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae) 	ENST00000524944.1|SCYL1|ENSG00000142186.12|SCY1-like 1 (S. cerevisiae)
hg19_v2_chr22_-_44258360_44258402	0.0365104	PAX8	ENST00000330884.4|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1 	ENST00000249130.5|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr6_+_135502501_135502652	0.0363413	PAX8	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr1_-_26394114_26394130	0.0357133	PAX8	ENST00000374272.3|TRIM63|ENSG00000158022.6|tripartite motif containing 63, E3 ubiquitin protein ligase
hg19_v2_chr8_-_124749609_124749658	0.0356139	PAX8	ENST00000262219.6|ANXA13|ENSG00000104537.12|annexin A13 	ENST00000419625.1|ANXA13|ENSG00000104537.12|annexin A13
hg19_v2_chr10_+_96443378_96443430	0.0337429	PAX8	ENST00000285979.6|CYP2C18|ENSG00000108242.8|cytochrome P450, family 2, subfamily C, polypeptide 18
hg19_v2_chr1_-_222763240_222763284	0.0335854	PAX8	ENST00000352967.4|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000391882.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000543857.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
hg19_v2_chr8_+_124428959_124428971	0.0333961	PAX8	ENST00000287387.2|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523984.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr11_+_60609537_60609567	0.0332437	PAX8	ENST00000227520.5|CCDC86|ENSG00000110104.7|coiled-coil domain containing 86
hg19_v2_chr6_+_24126350_24126497	0.0328904	PAX8	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr14_+_37667230_37667304	0.0328089	PAX8	ENST00000556451.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000556753.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000396294.2|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr17_+_7462103_7462110	0.0327666	PAX8	ENST00000396545.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr10_-_43892668_43892794	0.0324737	PAX8	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr1_+_203734296_203734318	0.0321741	PAX8	ENST00000442561.2|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1 	ENST00000367217.5|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1
hg19_v2_chr4_+_166128735_166128813	0.0320793	PAX8	ENST00000226725.6|KLHL2|ENSG00000109466.9|kelch-like family member 2
hg19_v2_chr13_-_99174252_99174307	0.0319251	PAX8	ENST00000376547.3|STK24|ENSG00000102572.10|serine/threonine kinase 24
hg19_v2_chr11_+_118403747_118403807	0.0317524	PAX8	ENST00000526853.1|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr12_-_86650045_86650076	0.0312755	PAX8	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr3_-_127842612_127842680	0.0311923	PAX8	ENST00000417360.1|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1 	ENST00000322623.5|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1
hg19_v2_chr1_+_13359819_13359819	0.0311737	PAX8	ENST00000376168.1|PRAMEF5|ENSG00000204502.2|PRAME family member 5
hg19_v2_chr7_-_112430427_112430478	0.0306464	PAX8	ENST00000449743.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000441474.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000454074.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000447395.1|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr10_+_103911926_103911967	0.0303793	PAX8	ENST00000605788.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000405356.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1
hg19_v2_chr17_+_7461580_7461610	0.030317	PAX8	ENST00000483039.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000396542.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr17_-_74023291_74023312	0.0301053	PAX8	ENST00000586740.1|EVPL|ENSG00000167880.3|envoplakin
hg19_v2_chr8_-_20040638_20040717	0.0298659	PAX8	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr17_+_7461849_7461914	0.0298322	PAX8	ENST00000338784.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr11_-_2170786_2170833	0.0298193	PAX8	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr8_+_124429006_124429076	0.0294244	PAX8	ENST00000522194.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523356.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr1_+_161494036_161494036	0.0290234	PAX8	ENST00000309758.4|HSPA6|ENSG00000173110.6|heat shock 70kDa protein 6 (HSP70B')
hg19_v2_chrX_+_129535937_129535994	0.0289661	PAX8	ENST00000305536.6|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2 	ENST00000370947.1|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2
hg19_v2_chr4_+_119809984_119810024	0.0281935	PAX8	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chrX_-_71458802_71458897	0.0279597	PAX8	ENST00000373657.1|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like 	ENST00000334463.3|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v2_chr21_-_27462351_27462377	0.0277957	PAX8	ENST00000448850.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr18_+_6256746_6256791	0.0276937	PAX8	ENST00000578427.1|RP11-760N9.1|ENSG00000264707.1|RP11-760N9.1
hg19_v2_chr17_+_7461781_7461820	0.0271691	PAX8	ENST00000349228.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr14_+_101123580_101123695	0.0270525	PAX8	ENST00000556697.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000360899.2|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523 	ENST00000553623.1|LINC00523|ENSG00000196273.3|long intergenic non-protein coding RNA 523
hg19_v2_chr3_-_161090660_161090673	0.0268802	PAX8	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chrX_+_151903207_151903234	0.0265822	PAX8	ENST00000370287.3|CSAG1|ENSG00000198930.8|chondrosarcoma associated gene 1
hg19_v2_chr6_+_160542821_160542852	0.0259806	PAX8	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr10_+_135340859_135341001	0.0258041	PAX8	ENST00000252945.3|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000421586.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000418356.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1
hg19_v2_chr11_+_60739249_60739338	0.024823	PAX8	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr19_-_55791563_55791749	0.0248192	PAX8	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr19_-_55791431_55791508	0.024808	PAX8	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr8_+_21915368_21915399	0.0246265	PAX8	ENST00000265800.5|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000517418.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr1_-_25256368_25256476	0.0234384	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr1_-_182573514_182573543	0.0232863	PAX8	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr19_-_55791540_55791549	0.0227947	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr11_-_47869865_47869914	0.0226087	PAX8	ENST00000530326.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa 	ENST00000532747.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chrX_+_151867214_151867284	0.0223847	PAX8	ENST00000329342.5|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000412733.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000457643.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6
hg19_v2_chr8_-_101117847_101117854	0.022311	PAX8	ENST00000523287.1|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22 	ENST00000519092.1|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22
hg19_v2_chr8_+_39792474_39792474	0.0220363	PAX8	ENST00000502986.2|IDO2|ENSG00000188676.9|indoleamine 2,3-dioxygenase 2
hg19_v2_chr19_+_9361606_9361606	0.021993	PAX8	ENST00000456448.1|OR7E24|ENSG00000237521.1|olfactory receptor, family 7, subfamily E, member 24
hg19_v2_chr12_-_10251603_10251619	0.0219898	PAX8	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr12_-_10251576_10251599	0.0213179	PAX8	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chrY_-_20935572_20935621	0.0210235	PAX8	ENST00000382852.1|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000344884.4|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000304790.3|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2
hg19_v2_chr1_-_231004220_231004399	0.0210063	PAX8	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chrX_+_23925918_23925918	0.0207263	PAX8	ENST00000379211.3|CXorf58|ENSG00000165182.6|chromosome X open reading frame 58
hg19_v2_chr6_-_82462425_82462491	0.0205469	PAX8	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chrY_+_20708557_20708606	0.0203414	PAX8	ENST00000307393.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000309834.4|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000382856.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1
hg19_v2_chr19_-_50168962_50169062	0.0199919	PAX8	ENST00000599223.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593922.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600022.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596765.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000599144.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596822.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598108.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601373.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000595034.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601291.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr9_-_134955246_134955295	0.0199127	PAX8	ENST00000357028.2|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000474263.1|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000292035.5|MED27|ENSG00000160563.9|mediator complex subunit 27
hg19_v2_chr17_+_30771279_30771536	0.0198768	PAX8	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chrX_-_151903184_151903211	0.0198025	PAX8	ENST00000357916.4|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12 	ENST00000393869.3|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12
hg19_v2_chr1_+_15943995_15944014	0.0195186	PAX8	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr20_-_42355629_42355651	0.0194495	PAX8	ENST00000373003.1|GTSF1L|ENSG00000124196.5|gametocyte specific factor 1-like
hg19_v2_chr2_+_191334212_191334242	0.0192316	PAX8	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chrX_-_23926004_23926072	0.0192081	PAX8	ENST00000379226.4|APOO|ENSG00000184831.9|apolipoprotein O 	ENST00000379220.3|APOO|ENSG00000184831.9|apolipoprotein O
hg19_v2_chr6_-_51952367_51952416	0.0191223	PAX8	ENST00000340994.4|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr1_+_197382957_197382964	0.0191013	PAX8	ENST00000367397.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr11_-_47870019_47870033	0.0189688	PAX8	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr16_-_28518153_28518187	0.0185641	PAX8	ENST00000356897.1|IL27|ENSG00000197272.2|interleukin 27
hg19_v2_chr2_+_62900986_62901019	0.0183172	PAX8	ENST00000405015.3|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000413434.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000426940.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1 	ENST00000449820.1|EHBP1|ENSG00000115504.10|EH domain binding protein 1
hg19_v2_chr11_+_5617858_5617934	0.0182946	PAX8	ENST00000380097.3|TRIM6|ENSG00000121236.15|tripartite motif containing 6
hg19_v2_chr2_-_29093132_29093183	0.0182694	PAX8	ENST00000306108.5|TRMT61B|ENSG00000171103.6|tRNA methyltransferase 61 homolog B (S. cerevisiae)
hg19_v2_chr19_-_50169064_50169132	0.0181117	PAX8	ENST00000593337.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598808.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600453.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593818.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000597198.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601809.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000377139.3|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr11_+_9482551_9482604	0.0180845	PAX8	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr2_-_234763147_234763212	0.0179384	PAX8	ENST00000411486.2|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000432087.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000441687.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000414924.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein
hg19_v2_chr17_-_80017856_80017970	0.0177929	PAX8	ENST00000577574.1|DUS1L|ENSG00000169718.13|dihydrouridine synthase 1-like (S. cerevisiae)
hg19_v2_chr11_-_105010320_105010516	0.017084	PAX8	ENST00000532895.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18 	ENST00000530950.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18
hg19_v2_chr2_-_128615681_128615737	0.0169736	PAX8	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr10_+_35484793_35484937	0.016417	PAX8	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr17_-_39216344_39216368	0.0163824	PAX8	ENST00000391418.2|KRTAP2-3|ENSG00000212724.2|keratin associated protein 2-3
hg19_v2_chr4_-_168155169_168155214	0.0163087	PAX8	ENST00000534949.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000535728.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr6_+_30131318_30131462	0.0158599	PAX8	ENST00000376688.1|TRIM15|ENSG00000204610.8|tripartite motif containing 15
hg19_v2_chr4_-_152682129_152682175	0.0158042	PAX8	ENST00000512306.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000508611.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000515812.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000263985.6|PET112|ENSG00000059691.7|PET112 homolog (yeast)
hg19_v2_chr12_-_54652060_54652211	0.0154357	PAX8	ENST00000552562.1|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr19_+_42301079_42301090	0.0153084	PAX8	ENST00000596544.1|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr5_+_140235469_140235634	0.015244	PAX8	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr6_-_52109335_52109335	0.0151759	PAX8	ENST00000336123.4|IL17F|ENSG00000112116.9|interleukin 17F
hg19_v2_chr19_+_35630926_35631009	0.0149186	PAX8	ENST00000588081.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1 	ENST00000589121.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr15_-_89010607_89010650	0.014892	PAX8	ENST00000312475.4|MRPL46|ENSG00000259494.1|mitochondrial ribosomal protein L46
hg19_v2_chr3_-_150264272_150264428	0.0147665	PAX8	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr2_+_79252834_79252861	0.0147484	PAX8	ENST00000409471.1|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr18_-_29264467_29264551	0.0146057	PAX8	ENST00000383131.3|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 	ENST00000237019.7|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr6_+_131571535_131571595	0.0145861	PAX8	ENST00000474850.2|AKAP7|ENSG00000118507.11|A kinase (PRKA) anchor protein 7
hg19_v2_chr16_-_31519691_31519734	0.0142997	PAX8	ENST00000567994.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000430477.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000570164.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000327237.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58
hg19_v2_chr4_+_72204755_72204778	0.0142105	PAX8	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr14_-_106610852_106610852	0.0139833	PAX8	ENST00000390603.2|IGHV3-15|ENSG00000211943.2|immunoglobulin heavy variable 3-15
hg19_v2_chr2_+_190306159_190306184	0.0138991	PAX8	ENST00000314761.4|WDR75|ENSG00000115368.5|WD repeat domain 75
hg19_v2_chr7_-_76255444_76255444	0.0137938	PAX8	ENST00000454397.1|POMZP3|ENSG00000146707.10|POM121 and ZP3 fusion
hg19_v2_chr2_+_217735493_217735496	0.0135594	PAX8	ENST00000456163.1|AC007557.1|ENSG00000223874.1|HCG1816075; Uncharacterized protein
hg19_v2_chr6_-_9939552_9939552	0.013277	PAX8	ENST00000460363.2|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr3_-_110612059_110612059	0.0132633	PAX8	ENST00000485473.1|RP11-553A10.1|ENSG00000206532.2|Uncharacterized protein
hg19_v2_chr17_+_6918093_6918139	0.0131559	PAX8	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr12_-_95044309_95044390	0.0129222	PAX8	ENST00000261226.4|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chrX_+_134887233_134887233	0.0127215	PAX8	ENST00000443882.1|CT45A3|ENSG00000232417.5|cancer/testis antigen family 45, member A3
hg19_v2_chr14_-_106054659_106054732	0.0123974	PAX8	ENST00000390539.2|IGHA2|ENSG00000211890.3|immunoglobulin heavy constant alpha 2 (A2m marker)
hg19_v2_chr14_+_22931924_22931924	0.0123807	PAX8	ENST00000390477.2|TRDC|ENSG00000211829.2|T cell receptor delta constant
hg19_v2_chr4_+_71600144_71600159	0.0123266	PAX8	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr17_-_67057114_67057136	0.0120276	PAX8	ENST00000370732.2|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr1_-_119682812_119682947	0.0116221	PAX8	ENST00000537870.1|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr12_-_57410304_57410325	0.0115775	PAX8	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr11_+_67055986_67056054	0.0115065	PAX8	ENST00000447274.2|ANKRD13D|ENSG00000172932.10|ankyrin repeat domain 13 family, member D
hg19_v2_chr2_+_219524473_219524495	0.01129	PAX8	ENST00000439945.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000431802.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr10_-_126694575_126694592	0.0112619	PAX8	ENST00000334808.6|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr6_-_31628512_31628566	0.0110693	PAX8	ENST00000375911.1|C6orf47|ENSG00000204439.3|chromosome 6 open reading frame 47
hg19_v2_chr2_-_84686552_84686624	0.0107421	PAX8	ENST00000393868.2|SUCLG1|ENSG00000163541.7|succinate-CoA ligase, alpha subunit
hg19_v2_chr8_+_133787586_133787673	0.0107158	PAX8	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr1_-_8585945_8586056	0.010664	PAX8	ENST00000377464.1|RERE|ENSG00000142599.13|arginine-glutamic acid dipeptide (RE) repeats
hg19_v2_chr12_-_6961050_6961230	0.0105382	PAX8	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr9_-_128246769_128246780	0.0103648	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr18_-_21017817_21017948	0.0103619	PAX8	ENST00000542162.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000383233.3|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000582336.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000450466.2|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000578520.1|TMEM241|ENSG00000134490.9|transmembrane protein 241 	ENST00000399707.1|TMEM241|ENSG00000134490.9|transmembrane protein 241
hg19_v2_chr9_+_27109133_27109187	0.0100539	PAX8	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr19_-_7812397_7812426	0.00993406	PAX8	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr7_+_90012986_90013035	0.00967239	PAX8	ENST00000416322.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr15_-_72523924_72524164	0.00965942	PAX8	ENST00000566809.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000567087.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000569050.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle 	ENST00000568883.1|PKM|ENSG00000067225.13|pyruvate kinase, muscle
hg19_v2_chr7_-_112430647_112430776	0.00952924	PAX8	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr3_-_141719195_141719215	0.00949601	PAX8	ENST00000397991.4|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr20_+_58571419_58571449	0.00947478	PAX8	ENST00000244049.3|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000350849.6|CDH26|ENSG00000124215.12|cadherin 26 	ENST00000456106.1|CDH26|ENSG00000124215.12|cadherin 26
hg19_v2_chr22_+_22707260_22707289	0.00945687	PAX8	ENST00000390293.1|IGLV5-48|ENSG00000211647.1|immunoglobulin lambda variable 5-48 (non-functional)
hg19_v2_chr17_-_67057047_67057094	0.00945284	PAX8	ENST00000495634.1|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9 	ENST00000453985.2|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9 	ENST00000585714.1|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr22_-_37403839_37403855	0.00925086	PAX8	ENST00000402860.3|TEX33|ENSG00000185264.7|testis expressed 33 	ENST00000381821.1|TEX33|ENSG00000185264.7|testis expressed 33
hg19_v2_chr6_+_43266063_43266097	0.00917168	PAX8	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr11_+_7626950_7626971	0.00899468	PAX8	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr3_-_107941209_107941227	0.00894188	PAX8	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr12_+_128399965_128400017	0.00869404	PAX8	ENST00000540882.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507 	ENST00000542089.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr22_-_37403858_37403896	0.00859525	PAX8	ENST00000405091.2|TEX33|ENSG00000185264.7|testis expressed 33
hg19_v2_chr19_+_40476912_40476939	0.00851141	PAX8	ENST00000157812.2|PSMC4|ENSG00000013275.3|proteasome (prosome, macropain) 26S subunit, ATPase, 4
hg19_v2_chr21_-_43816052_43816116	0.00823823	PAX8	ENST00000398405.1|TMPRSS3|ENSG00000160183.9|transmembrane protease, serine 3
hg19_v2_chr12_-_6960407_6960464	0.00802349	PAX8	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr9_-_21228221_21228221	0.00791105	PAX8	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr2_+_171036635_171036673	0.00788631	PAX8	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr11_+_113185292_113185325	0.0078286	PAX8	ENST00000429951.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000442859.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000531164.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000529850.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000314756.3|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000525965.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12
hg19_v2_chr6_+_160542870_160542968	0.00779596	PAX8	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr3_+_121796697_121796750	0.00772574	PAX8	ENST00000482356.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000393627.2|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr3_+_125694347_125694467	0.00768701	PAX8	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr2_-_37193606_37193633	0.00765293	PAX8	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr15_+_89631647_89631725	0.00761334	PAX8	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr4_-_145061788_145061904	0.00719617	PAX8	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr17_-_73267304_73267328	0.0070931	PAX8	ENST00000579297.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000580571.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr17_-_44657017_44657088	0.00701077	PAX8	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr19_+_35842445_35842445	0.00689844	PAX8	ENST00000246553.2|FFAR1|ENSG00000126266.2|free fatty acid receptor 1
hg19_v2_chr12_-_123201337_123201439	0.00673522	PAX8	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr20_-_1373682_1373709	0.00663794	PAX8	ENST00000381724.3|FKBP1A|ENSG00000088832.10|FK506 binding protein 1A, 12kDa
hg19_v2_chr12_-_18890940_18890991	0.00649723	PAX8	ENST00000543242.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000539072.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000541966.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000266505.7|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000447925.2|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000435379.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1
hg19_v2_chr4_-_69536346_69536371	0.00645055	PAX8	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr7_+_128312346_128312371	0.00614204	PAX8	ENST00000480462.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000378704.3|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000477515.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2
hg19_v2_chr13_-_25746416_25746433	0.00611956	PAX8	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr17_-_67057203_67057228	0.00601549	PAX8	ENST00000340001.4|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr19_+_52901094_52901134	0.00586233	PAX8	ENST00000391788.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000436397.1|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000391787.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000360465.3|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000494167.2|ZNF528|ENSG00000167555.9|zinc finger protein 528 	ENST00000493272.1|ZNF528|ENSG00000167555.9|zinc finger protein 528
hg19_v2_chr1_-_157522260_157522315	0.00580226	PAX8	ENST00000368191.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000361835.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5
hg19_v2_chr4_+_75230853_75230871	0.0057322	PAX8	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr7_+_95115210_95115217	0.00572376	PAX8	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr5_+_69321074_69321200	0.00554972	PAX8	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr19_+_42300548_42300559	0.00546324	PAX8	ENST00000344550.4|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr9_+_111624577_111624603	0.00541545	PAX8	ENST00000333999.3|ACTL7A|ENSG00000187003.5|actin-like 7A
hg19_v2_chr13_-_103426112_103426164	0.00535699	PAX8	ENST00000376032.4|TEX30|ENSG00000151287.12|testis expressed 30 	ENST00000376029.3|TEX30|ENSG00000151287.12|testis expressed 30
hg19_v2_chr16_+_318638_318726	0.00516676	PAX8	ENST00000412541.1|ARHGDIG|ENSG00000242173.4|Rho GDP dissociation inhibitor (GDI) gamma 	ENST00000435035.1|ARHGDIG|ENSG00000242173.4|Rho GDP dissociation inhibitor (GDI) gamma
hg19_v2_chr3_-_110612323_110612323	0.00510112	PAX8	ENST00000383686.2|RP11-553A10.1|ENSG00000206532.2|Uncharacterized protein
hg19_v2_chr12_+_128399917_128399958	0.00508958	PAX8	ENST00000544645.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr19_+_17337473_17337549	0.00496348	PAX8	ENST00000598068.1|OCEL1|ENSG00000099330.4|occludin/ELL domain containing 1
hg19_v2_chr2_-_79386786_79386886	0.00494814	PAX8	ENST00000393878.1|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000305165.2|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000409839.3|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha
hg19_v2_chr17_-_73267214_73267277	0.0048735	PAX8	ENST00000580717.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000577542.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000579612.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000245551.5|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr17_-_73267281_73267299	0.00486006	PAX8	ENST00000578305.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000325102.8|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr11_+_55594695_55594695	0.00471903	PAX8	ENST00000378397.1|OR5L2|ENSG00000205030.1|olfactory receptor, family 5, subfamily L, member 2
hg19_v2_chr11_-_104905840_104905977	0.00458543	PAX8	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr4_-_80329356_80329387	0.00453907	PAX8	ENST00000358842.3|GK2|ENSG00000196475.4|glycerol kinase 2
hg19_v2_chr19_-_7812446_7812473	0.00447382	PAX8	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr7_+_5938351_5938379	0.00434157	PAX8	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr6_+_63921399_63921462	0.00432499	PAX8	ENST00000356170.3|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr11_+_107461948_107462009	0.00427912	PAX8	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr8_-_66546439_66546451	0.00385393	PAX8	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr3_+_130279178_130279178	0.00384256	PAX8	ENST00000358511.6|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6 	ENST00000453409.2|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6
hg19_v2_chr22_+_27017921_27017928	0.00384062	PAX8	ENST00000354760.3|CRYBA4|ENSG00000196431.3|crystallin, beta A4
hg19_v2_chr11_+_60223312_60223353	0.00357574	PAX8	ENST00000532491.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000532073.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000534668.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000528313.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000533306.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chr1_-_119683251_119683298	0.00346198	PAX8	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr17_-_42100474_42100589	0.00341566	PAX8	ENST00000585950.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000592127.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000589334.1|TMEM101|ENSG00000091947.5|transmembrane protein 101
hg19_v2_chr11_+_27076764_27076822	0.00338137	PAX8	ENST00000525090.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr7_+_150413645_150413709	0.00325314	PAX8	ENST00000307194.5|GIMAP1|ENSG00000213203.2|GTPase, IMAP family member 1
hg19_v2_chr7_+_5938386_5938433	0.0031132	PAX8	ENST00000537980.1|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr2_+_90248739_90248739	0.00306096	PAX8	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr2_-_136288113_136288301	0.00294904	PAX8	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chr11_+_63742050_63742104	0.00288732	PAX8	ENST00000314133.3|COX8A|ENSG00000176340.3|cytochrome c oxidase subunit VIIIA (ubiquitous) 	ENST00000535431.1|AP000721.4|ENSG00000256100.1|Uncharacterized protein
hg19_v2_chr17_-_27278304_27278408	0.00287923	PAX8	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr7_-_99277610_99277626	0.00274705	PAX8	ENST00000343703.5|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000222982.4|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000439761.1|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000339843.2|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v2_chr13_+_27844464_27844464	0.0026986	PAX8	ENST00000241463.4|RASL11A|ENSG00000122035.6|RAS-like, family 11, member A
hg19_v2_chr16_-_87350970_87351006	0.00264881	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chr13_-_95131923_95131944	0.00253545	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chrX_+_17653413_17653413	0.00246554	PAX8	ENST00000398097.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr12_-_129308487_129308588	0.00234524	PAX8	ENST00000266771.5|SLC15A4|ENSG00000139370.6|solute carrier family 15 (oligopeptide transporter), member 4
hg19_v2_chr15_+_45028520_45028560	0.00219125	PAX8	ENST00000329464.4|TRIM69|ENSG00000185880.8|tripartite motif containing 69
hg19_v2_chr6_+_30130969_30131007	0.0021707	PAX8	ENST00000376694.4|TRIM15|ENSG00000204610.8|tripartite motif containing 15
hg19_v2_chr2_+_79252804_79252815	0.00212341	PAX8	ENST00000393897.2|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr15_-_73925651_73925773	0.00196731	PAX8	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr4_-_10686475_10686490	0.00187237	PAX8	ENST00000226951.6|CLNK|ENSG00000109684.10|cytokine-dependent hematopoietic cell linker
hg19_v2_chr17_+_67410832_67410871	0.00181446	PAX8	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr14_-_23288930_23289020	0.00176484	PAX8	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr4_-_144826682_144826716	0.00172706	PAX8	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr4_+_80748640_80748689	0.00170216	PAX8	ENST00000514836.1|PCAT4|ENSG00000251321.1|prostate cancer associated transcript 4 (non-protein coding)
hg19_v2_chr17_-_73781567_73781629	0.00160509	PAX8	ENST00000586607.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr7_+_107531580_107531647	0.00160287	PAX8	ENST00000537148.1|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase 	ENST00000440410.1|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase 	ENST00000437604.2|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase
hg19_v2_chr1_-_47131521_47131532	0.00156256	PAX8	ENST00000542495.1|ATPAF1|ENSG00000123472.8|ATP synthase mitochondrial F1 complex assembly factor 1 	ENST00000532925.1|ATPAF1|ENSG00000123472.8|ATP synthase mitochondrial F1 complex assembly factor 1
hg19_v2_chr12_-_57873631_57873672	0.0015236	PAX8	ENST00000393791.3|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000356411.2|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9 	ENST00000552249.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr1_+_155006300_155006446	0.00151583	PAX8	ENST00000295542.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000392480.1|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000423025.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1 	ENST00000368419.2|DCST1|ENSG00000163357.6|DC-STAMP domain containing 1
hg19_v2_chr1_-_71513471_71513506	0.00141789	PAX8	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr19_-_40228657_40228674	0.00133784	PAX8	ENST00000221804.4|CLC|ENSG00000105205.6|Charcot-Leyden crystal galectin
hg19_v2_chr17_+_1933404_1933457	0.00129419	PAX8	ENST00000263083.6|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1 	ENST00000571418.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr17_-_44439084_44439130	0.00103363	PAX8	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr22_+_22730353_22730360	0.000995805	PAX8	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chrY_-_13524717_13524717	0.000960978	PAX8	ENST00000331172.6|SLC9B1P1|ENSG00000183704.6|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 1
hg19_v2_chr2_+_79252822_79252833	0.000941392	PAX8	ENST00000272324.5|REG3G|ENSG00000143954.8|regenerating islet-derived 3 gamma
hg19_v2_chr9_+_125376948_125376948	0.000825845	PAX8	ENST00000297913.2|OR1Q1|ENSG00000165202.2|olfactory receptor, family 1, subfamily Q, member 1
hg19_v2_chr14_+_75230011_75230120	0.000765544	PAX8	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr2_-_211179883_211179914	0.000577383	PAX8	ENST00000352451.3|MYL1|ENSG00000168530.11|myosin, light chain 1, alkali; skeletal, fast
hg19_v2_chr11_-_62457371_62457371	0.000508535	PAX8	ENST00000317449.4|LRRN4CL|ENSG00000177363.4|LRRN4 C-terminal like
hg19_v2_chr11_+_9482512_9482534	0.000394183	PAX8	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr4_-_16077741_16077760	0.000313809	PAX8	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr2_+_120301997_120302038	0.000101428	PAX8	ENST00000602047.1|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1
hg19_v2_chr4_+_154073469_154073645	9.50466e-05	PAX8	ENST00000441616.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
