hg19_v2_chr14_-_61116168_61116180	0.245863	UAAGACG	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr6_+_72596604_72596727	0.200613	UAAGACG	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr5_-_158526756_158526797	0.196555	UAAGACG	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr1_+_145611010_145611046	0.116034	UAAGACG	ENST00000369291.5|RNF115|ENSG00000121848.9|ring finger protein 115
hg19_v2_chr12_-_92539614_92539673	0.0914972	UAAGACG	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr3_+_29322803_29322850	0.0848312	UAAGACG	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr17_+_66508537_66508650	0.0838751	UAAGACG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr8_+_17013515_17013540	0.077997	UAAGACG	ENST00000262096.8|ZDHHC2|ENSG00000104219.8|zinc finger, DHHC-type containing 2
hg19_v2_chr7_+_90225796_90225811	0.0776163	UAAGACG	ENST00000380050.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr2_+_120517174_120517207	0.0688298	UAAGACG	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr6_+_36646435_36646498	0.0644554	UAAGACG	ENST00000244741.5|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000405375.1|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1) 	ENST00000373711.2|CDKN1A|ENSG00000124762.9|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg19_v2_chr5_-_114880533_114880591	0.0638959	UAAGACG	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr13_-_107220455_107220517	0.0618383	UAAGACG	ENST00000400198.3|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr14_+_105781048_105781101	0.0601886	UAAGACG	ENST00000458164.2|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2 	ENST00000447393.1|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2
hg19_v2_chr8_+_38614807_38614851	0.0595139	UAAGACG	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr10_+_63661053_63661079	0.0574871	UAAGACG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr3_-_18466787_18466861	0.0573062	UAAGACG	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr8_-_23712312_23712328	0.0556502	UAAGACG	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr1_-_225840747_225840860	0.0554626	UAAGACG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr14_+_29234870_29235050	0.0548772	UAAGACG	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr1_+_97187318_97187380	0.0534903	UAAGACG	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr17_+_58677539_58677610	0.0515397	UAAGACG	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr15_-_49338748_49338765	0.0483759	UAAGACG	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr14_-_35182994_35183034	0.0480342	UAAGACG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr1_+_50574585_50574638	0.0479591	UAAGACG	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr13_+_49550015_49550070	0.0477922	UAAGACG	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr14_-_50698276_50698304	0.0471504	UAAGACG	ENST00000216373.5|SOS2|ENSG00000100485.7|son of sevenless homolog 2 (Drosophila)
hg19_v2_chr5_-_76788317_76788421	0.0466356	UAAGACG	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr1_+_36396677_36396749	0.0441615	UAAGACG	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr10_+_112631547_112631596	0.0433839	UAAGACG	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr16_-_4897266_4897343	0.0433803	UAAGACG	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v2_chr9_+_96793076_96793128	0.0399229	UAAGACG	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chrX_-_114468605_114468640	0.0388328	UAAGACG	ENST00000538422.1|LRCH2|ENSG00000130224.10|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENST00000317135.8|LRCH2|ENSG00000130224.10|leucine-rich repeats and calponin homology (CH) domain containing 2
hg19_v2_chr3_-_72496035_72496069	0.0375287	UAAGACG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr7_-_120498357_120498456	0.0360861	UAAGACG	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr20_+_48552908_48552949	0.0351763	UAAGACG	ENST00000244061.2|RNF114|ENSG00000124226.7|ring finger protein 114
hg19_v2_chr5_+_161274685_161274747	0.0339996	UAAGACG	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr3_-_15374033_15374136	0.0322423	UAAGACG	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr1_-_108507631_108507809	0.0312075	UAAGACG	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr1_-_70820357_70820435	0.0310654	UAAGACG	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr7_+_138916231_138916231	0.0303421	UAAGACG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr16_+_54964740_54964789	0.0301948	UAAGACG	ENST00000394636.4|IRX5|ENSG00000176842.10|iroquois homeobox 5
hg19_v2_chr9_-_72374848_72374894	0.0294677	UAAGACG	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr5_-_131132614_131132648	0.0291466	UAAGACG	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr7_-_30029367_30029474	0.0283959	UAAGACG	ENST00000242059.5|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chr4_-_66536057_66536071	0.0281538	UAAGACG	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr4_+_139936905_139936944	0.0267898	UAAGACG	ENST00000280614.2|CCRN4L|ENSG00000151014.4|CCR4 carbon catabolite repression 4-like (S. cerevisiae)
hg19_v2_chr19_-_7293942_7294045	0.0264897	UAAGACG	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr17_-_8534067_8534088	0.0262419	UAAGACG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr9_+_82186872_82186898	0.0259784	UAAGACG	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr5_+_60628074_60628100	0.025765	UAAGACG	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr2_+_228029281_228029330	0.0249577	UAAGACG	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr12_+_72148614_72148699	0.024475	UAAGACG	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr5_+_122110691_122110898	0.0242394	UAAGACG	ENST00000379516.2|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000505934.1|SNX2|ENSG00000205302.2|sorting nexin 2 	ENST00000514949.1|SNX2|ENSG00000205302.2|sorting nexin 2
hg19_v2_chr17_-_62050278_62050278	0.0240843	UAAGACG	ENST00000578147.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit 	ENST00000435607.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit
hg19_v2_chr9_-_127952032_127952098	0.0230031	UAAGACG	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr8_+_48920960_48921011	0.022591	UAAGACG	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr1_-_16678914_16678989	0.0225827	UAAGACG	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr1_+_43148059_43148111	0.0223194	UAAGACG	ENST00000321358.7|YBX1|ENSG00000065978.13|Y box binding protein 1 	ENST00000332220.6|YBX1|ENSG00000065978.13|Y box binding protein 1
hg19_v2_chr3_+_89156674_89156797	0.0217149	UAAGACG	ENST00000336596.2|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr3_+_186501336_186501386	0.0212064	UAAGACG	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr1_+_19923454_19923561	0.0183537	UAAGACG	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr19_-_3700388_3700500	0.0181772	UAAGACG	ENST00000589578.1|PIP5K1C|ENSG00000186111.4|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 	ENST00000537021.1|PIP5K1C|ENSG00000186111.4|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 	ENST00000539785.1|PIP5K1C|ENSG00000186111.4|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 	ENST00000335312.3|PIP5K1C|ENSG00000186111.4|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma
hg19_v2_chr3_-_71774516_71774587	0.0175036	UAAGACG	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chrY_+_15016725_15016769	0.0169521	UAAGACG	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr13_+_50571155_50571229	0.0165043	UAAGACG	ENST00000420995.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000378182.3|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000356017.4|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000457662.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr10_-_27149792_27149850	0.0151852	UAAGACG	ENST00000376140.3|ABI1|ENSG00000136754.12|abl-interactor 1 	ENST00000376170.4|ABI1|ENSG00000136754.12|abl-interactor 1
hg19_v2_chrX_+_28605516_28605608	0.0132313	UAAGACG	ENST00000378993.1|IL1RAPL1|ENSG00000169306.5|interleukin 1 receptor accessory protein-like 1
hg19_v2_chr6_+_163835669_163835693	0.0113539	UAAGACG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr17_+_38219063_38219154	0.0110029	UAAGACG	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr1_+_110527308_110527349	0.0109661	UAAGACG	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chrX_-_24045303_24045303	0.0106513	UAAGACG	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr18_-_21977748_21977823	0.0095491	UAAGACG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr17_-_40306934_40307035	0.00890695	UAAGACG	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr6_+_133562472_133562556	0.00841265	UAAGACG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr3_-_15563229_15563265	0.00836042	UAAGACG	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr11_-_118047376_118047388	0.00766846	UAAGACG	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr9_-_16870704_16870841	0.00701322	UAAGACG	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr9_-_34126730_34126771	0.00697142	UAAGACG	ENST00000361264.4|DCAF12|ENSG00000198876.8|DDB1 and CUL4 associated factor 12
hg19_v2_chr15_+_57210818_57210930	0.00692604	UAAGACG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr5_+_112043186_112043225	0.00682912	UAAGACG	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chrX_+_16737718_16737778	0.00680415	UAAGACG	ENST00000380155.3|SYAP1|ENSG00000169895.5|synapse associated protein 1
hg19_v2_chr7_-_106301405_106301484	0.00663557	UAAGACG	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chr2_-_86564776_86564813	0.00609884	UAAGACG	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr10_-_75255724_75255792	0.00596141	UAAGACG	ENST00000342558.3|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000360663.5|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394829.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394828.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme 	ENST00000394822.2|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr1_-_39339777_39339777	0.00586635	UAAGACG	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr1_-_21113105_21113186	0.00472587	UAAGACG	ENST00000375000.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000419490.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000414993.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000443615.1|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3 	ENST00000312239.5|HP1BP3|ENSG00000127483.13|heterochromatin protein 1, binding protein 3
hg19_v2_chr22_+_30279144_30279202	0.00429499	UAAGACG	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr1_-_39347255_39347303	0.00426048	UAAGACG	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr2_+_176987088_176987088	0.00327801	UAAGACG	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr7_+_114055052_114055378	0.00219951	UAAGACG	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr8_+_56014949_56015048	0.00215662	UAAGACG	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr17_-_73775839_73775868	0.00182947	UAAGACG	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr1_-_154842741_154842772	0.0017738	UAAGACG	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr17_-_36762095_36762212	0.00139409	UAAGACG	ENST00000578925.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1 	ENST00000264659.7|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr17_-_45266542_45266683	0.00102492	UAAGACG	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr16_-_46655538_46655538	0.000753031	UAAGACG	ENST00000303383.3|SHCBP1|ENSG00000171241.4|SHC SH2-domain binding protein 1
hg19_v2_chr13_+_100258907_100258953	0.000141565	UAAGACG	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
