hg18_v1_chr1_+_556968_557169	0.132118	PAX8.p2	
hg18_v1_chr7_+_129771865_129771936	0.110451	PAX8.p2	NM_001127441|CPA5|93979|carboxypeptidase A5	NM_001127442|CPA5|93979|carboxypeptidase A5	NM_080385|CPA5|93979|carboxypeptidase A5	AK093288|CPA5|93979|carboxypeptidase A5	AK315256|CPA5|93979|carboxypeptidase A5	BC039362|CPA5|93979|carboxypeptidase A5	AY155230|CPA5|93979|carboxypeptidase A5	BC053681|CPA5|93979|carboxypeptidase A5	BC042996|CPA5|93979|carboxypeptidase A5	AK131191|CPA5|93979|carboxypeptidase A5	AY155229|CPA5|93979|carboxypeptidase A5
hg18_v1_chr10_+_85923473_85923546	0.0575006	PAX8.p2	NM_207373|C10orf99|387695|chromosome 10 open reading frame 99	AY358751|C10orf99|387695|chromosome 10 open reading frame 99
hg18_v1_chr3_-_44464722_44464794	0.0506348	PAX8.p2	
hg18_v1_chr6_-_31215089_31215105	0.043929	PAX8.p2	AB031480|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	AF484420|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2	NM_014069|PSORS1C2|170680|psoriasis susceptibility 1 candidate 2
hg18_v1_chr12_-_91346054_91346054	0.0292395	PAX8.p2	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand
hg18_v1_chr8_+_39911630_39911630	0.0284978	PAX8.p2	AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2	NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2
hg18_v1_chr1_-_27825178_27825337	0.0227931	PAX8.p2	AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog
hg18_v1_chr3_-_9266251_9266385	0.021252	PAX8.p2	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3
hg18_v1_chrX_+_99726445_99726670	0.0211925	PAX8.p2	NM_022144|TNMD|64102|tenomodulin	AF191770|TNMD|64102|tenomodulin	BC034030|TNMD|64102|tenomodulin	AF291656|TNMD|64102|tenomodulin	AF234259|TNMD|64102|tenomodulin	AY358706|TNMD|64102|tenomodulin	AB055421|TNMD|64102|tenomodulin
hg18_v1_chrX_-_152794592_152794698	0.0200654	PAX8.p2	NM_000425|L1CAM|3897|L1 cell adhesion molecule	NM_001143963|L1CAM|3897|L1 cell adhesion molecule	NM_024003|L1CAM|3897|L1 cell adhesion molecule	BC126229|L1CAM|3897|L1 cell adhesion molecule	BC136447|L1CAM|3897|L1 cell adhesion molecule
hg18_v1_chr10_+_135190855_135190990	0.019942	PAX8.p2	AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR592801|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR621945|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR626742|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR626746|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR603555|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR618024|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	CR622294|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1
hg18_v1_chr1_+_111573855_111573988	0.0166574	PAX8.p2	NM_001025199|CHI3L2|1117|chitinase 3-like 2	U58515|CHI3L2|1117|chitinase 3-like 2	CR603396|CHI3L2|1117|chitinase 3-like 2	CR610069|CHI3L2|1117|chitinase 3-like 2	CR608464|CHI3L2|1117|chitinase 3-like 2	CR599276|CHI3L2|1117|chitinase 3-like 2	AK298466|CHI3L2|1117|chitinase 3-like 2	CR625467|CHI3L2|1117|chitinase 3-like 2	AK223316|CHI3L2|1117|chitinase 3-like 2	CR623620|CHI3L2|1117|chitinase 3-like 2
hg18_v1_chr1_+_150997129_150997129	0.0163882	PAX8.p2	NM_001025231|KPRP|448834|keratinocyte proline-rich protein
hg18_v1_chr17_-_36899641_36899641	0.0121544	PAX8.p2	NM_003771|KRT36|8689|keratin 36
hg18_v1_chr1_-_171442937_171443093	0.0118897	PAX8.p2	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4
hg18_v1_chr17_+_63346625_63346638	0.0115772	PAX8.p2	AK022570|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr7_+_129057152_129057154	0.0111873	PAX8.p2	L22454|NRF1|4899|nuclear respiratory factor 1	NM_001040110|NRF1|4899|nuclear respiratory factor 1
hg18_v1_chrX_-_33139349_33139593	0.0110061	PAX8.p2	M63073|DMD|1756|dystrophin	M63074|DMD|1756|dystrophin	X14298|DMD|1756|dystrophin	AK309142|DMD|1756|dystrophin	M18533|DMD|1756|dystrophin	BC010932|DMD|1756|dystrophin	NM_004006|DMD|1756|dystrophin
hg18_v1_chr19_+_46992361_46992423	0.01022	PAX8.p2	NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3	D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3	D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3	L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3	L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3	BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3
hg18_v1_chr17_+_7402315_7402365	0.0101667	PAX8.p2	NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13
hg18_v1_chr10_+_103901922_103902161	0.00866985	PAX8.p2	NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	CR602162|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1	D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1
hg18_v1_chr9_+_123088690_123088729	0.00812351	PAX8.p2	AK299453|GSN|2934|gelsolin
hg18_v1_chrX_+_48127911_48127911	0.00733583	PAX8.p2	BC005325|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_001034832|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_001040612|SSX4B|548313|synovial sarcoma, X breakpoint 4B	NM_005636|SSX4|6759|synovial sarcoma, X breakpoint 4	NM_175729|SSX4|6759|synovial sarcoma, X breakpoint 4
hg18_v1_chr13_-_102209422_102209422	0.00712863	PAX8.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chr17_-_64568641_64568730	0.00695916	PAX8.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr2_-_87102453_87102485	0.0049927	PAX8.p2	BC107767|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC022294|PLGLB2|5342|plasminogen-like B2
hg18_v1_chr1_-_246804680_246804702	0.00420372	PAX8.p2	NM_001001821|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136924|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136926|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34
hg18_v1_chr1_+_152566899_152566899	0.00408267	PAX8.p2	AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2	NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2
hg18_v1_chr12_-_101396459_101396558	0.0039189	PAX8.p2	M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr7_-_99604171_99604308	0.00352902	PAX8.p2	CR605645|GAL3ST4|79690|galactose-3-O-sulfotransferase 4	NM_024637|GAL3ST4|79690|galactose-3-O-sulfotransferase 4
hg18_v1_chr17_-_23721485_23721499	0.00273253	PAX8.p2	NM_000638|VTN|7448|vitronectin
hg18_v1_chr1_+_66570683_66570684	0.00235015	PAX8.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr4_+_75449720_75449889	0.00182214	PAX8.p2	AK314959|EREG|2069|epiregulin	D30783|EREG|2069|epiregulin	NM_001432|EREG|2069|epiregulin	BC035806|EREG|2069|epiregulin	BC136404|EREG|2069|epiregulin	BC136405|EREG|2069|epiregulin	CR541887|EREG|2069|epiregulin
hg18_v1_chr7_+_110518297_110518421	0.00103467	PAX8.p2	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3	NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3	NM_018334|LRRN3|54674|leucine rich repeat neuronal 3	AK001991|LRRN3|54674|leucine rich repeat neuronal 3	BC035133|LRRN3|54674|leucine rich repeat neuronal 3
hg18_v1_chr1_-_246554492_246554521	0.000494532	PAX8.p2	NM_001004691|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7	BC136944|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7	BC136946|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7
