hg18_v1_chr12_+_52697160_52697223	1.18487	LHX3,4.p2	BC034922|HOXC5|3222|homeobox C5	BC044635|HOXC5|3222|homeobox C5	M16938|HOXC6|3223|homeobox C6	AK314829|HOXC6|3223|homeobox C6
hg18_v1_chr13_-_45323757_45323846	0.995392	LHX3,4.p2	BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)	NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)
hg18_v1_chr7_-_122627235_122627260	0.960761	LHX3,4.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr8_-_62764839_62764961	0.955726	LHX3,4.p2	AF184241|ASPH|444|aspartate beta-hydroxylase	AF306765|ASPH|444|aspartate beta-hydroxylase	AF224469|ASPH|444|aspartate beta-hydroxylase	BC144362|ASPH|444|aspartate beta-hydroxylase	BC144363|ASPH|444|aspartate beta-hydroxylase	AF224468|ASPH|444|aspartate beta-hydroxylase	AK304314|ASPH|444|aspartate beta-hydroxylase	AK295528|ASPH|444|aspartate beta-hydroxylase	NM_001164750|ASPH|444|aspartate beta-hydroxylase	NM_001164751|ASPH|444|aspartate beta-hydroxylase	NM_001164752|ASPH|444|aspartate beta-hydroxylase	NM_001164753|ASPH|444|aspartate beta-hydroxylase	NM_020164|ASPH|444|aspartate beta-hydroxylase	NM_032467|ASPH|444|aspartate beta-hydroxylase	NM_032468|ASPH|444|aspartate beta-hydroxylase
hg18_v1_chr6_-_66346417_66346436	0.94821	LHX3,4.p2	AY358133|EYS|346007|eyes shut homolog (Drosophila)	NM_198283|EYS|346007|eyes shut homolog (Drosophila)	AK310478|EYS|346007|eyes shut homolog (Drosophila)
hg18_v1_chr8_-_131483395_131483398	0.913765	LHX3,4.p2	BC137135|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	BC144493|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
hg18_v1_chr10_-_33264491_33264491	0.868106	LHX3,4.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg18_v1_chr22_-_38619739_38619739	0.859146	LHX3,4.p2	BC033895|ENTHD1|150350|ENTH domain containing 1	NM_152512|ENTHD1|150350|ENTH domain containing 1
hg18_v1_chr12_+_52696908_52696981	0.845851	LHX3,4.p2	NM_014620|HOXC4|3221|homeobox C4	NM_153693|HOXC6|3223|homeobox C6	X07495|HOXC4|3221|homeobox C4
hg18_v1_chr10_+_102212787_102212804	0.812724	LHX3,4.p2	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B	NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B	AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B
hg18_v1_chr8_+_32905027_32905036	0.728358	LHX3,4.p2	
hg18_v1_chr1_+_157526127_157526127	0.711945	LHX3,4.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg18_v1_chr15_+_92700167_92700459	0.700546	LHX3,4.p2	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2	BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2	BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2	AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2
hg18_v1_chr9_-_137671206_137671206	0.699391	LHX3,4.p2	AY336054|GLT6D1|360203|glycosyltransferase 6 domain containing 1	NM_182974|GLT6D1|360203|glycosyltransferase 6 domain containing 1
hg18_v1_chr9_+_4829763_4829773	0.695907	LHX3,4.p2	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1
hg18_v1_chr15_+_46271158_46271253	0.674861	LHX3,4.p2	BX537772|CTXN2|399697|cortexin 2	NM_001145668|CTXN2|399697|cortexin 2	AK295375|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr12_-_88573949_88574015	0.663371	LHX3,4.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chr4_+_71054492_71054681	0.661789	LHX3,4.p2	NM_214711|C4orf40|401137|chromosome 4 open reading frame 40	BX640924|C4orf40|401137|chromosome 4 open reading frame 40	BX648724|C4orf40|401137|chromosome 4 open reading frame 40	BX648895|C4orf40|401137|chromosome 4 open reading frame 40	BX647185|C4orf40|401137|chromosome 4 open reading frame 40	BX640892|C4orf40|401137|chromosome 4 open reading frame 40	BX647183|C4orf40|401137|chromosome 4 open reading frame 40	BX648872|C4orf40|401137|chromosome 4 open reading frame 40	AM393471|C4orf40|401137|chromosome 4 open reading frame 40	BC146696|C4orf40|401137|chromosome 4 open reading frame 40
hg18_v1_chr18_+_59733724_59733724	0.661757	LHX3,4.p2	BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg18_v1_chr3_-_69212192_69212234	0.6561	LHX3,4.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr12_-_10870134_10870223	0.638135	LHX3,4.p2	BC069089|TAS2R10|50839|taste receptor, type 2, member 10	NM_023921|TAS2R10|50839|taste receptor, type 2, member 10	BC101762|TAS2R10|50839|taste receptor, type 2, member 10	BC101764|TAS2R10|50839|taste receptor, type 2, member 10
hg18_v1_chr10_+_685887_686016	0.636185	LHX3,4.p2	AK096000|C10orf108|414235|chromosome 10 open reading frame 108	AK296168|C10orf108|414235|chromosome 10 open reading frame 108	AK096013|C10orf108|414235|chromosome 10 open reading frame 108
hg18_v1_chr21_-_35153664_35153748	0.631774	LHX3,4.p2	S76350|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr4_-_116254381_116254480	0.620712	LHX3,4.p2	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg18_v1_chr5_+_166644420_166644420	0.606772	LHX3,4.p2	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)
hg18_v1_chr3_-_54937001_54937111	0.604049	LHX3,4.p2	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1
hg18_v1_chr5_-_88155360_88155499	0.589392	LHX3,4.p2	EU446634|MEF2C|4208|myocyte enhancer factor 2C	EU832832|MEF2C|4208|myocyte enhancer factor 2C	FM163484|MEF2C|4208|myocyte enhancer factor 2C	FM180475|MEF2C|4208|myocyte enhancer factor 2C	GQ129219|MEF2C|4208|myocyte enhancer factor 2C	GQ129221|MEF2C|4208|myocyte enhancer factor 2C	GQ129392|MEF2C|4208|myocyte enhancer factor 2C	GQ129393|MEF2C|4208|myocyte enhancer factor 2C	NM_001193348|MEF2C|4208|myocyte enhancer factor 2C	NM_001193349|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr20_-_18425811_18425886	0.577636	LHX3,4.p2	EU446767|RBBP9|10741|retinoblastoma binding protein 9	AL832411|RBBP9|10741|retinoblastoma binding protein 9	AF237576|RBBP9|10741|retinoblastoma binding protein 9	BC020627|RBBP9|10741|retinoblastoma binding protein 9	BC015938|RBBP9|10741|retinoblastoma binding protein 9	NM_006606|RBBP9|10741|retinoblastoma binding protein 9
hg18_v1_chr4_-_120462705_120462763	0.572593	LHX3,4.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr11_+_33306652_33306721	0.567348	LHX3,4.p2	AY425958|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr14_+_74968589_74968589	0.550495	LHX3,4.p2	BC051303|JDP2|122953|Jun dimerization protein 2	NM_001135049|JDP2|122953|Jun dimerization protein 2
hg18_v1_chr10_+_63478974_63479230	0.542534	LHX3,4.p2	BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr11_+_22646229_22646229	0.537945	LHX3,4.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg18_v1_chr5_-_160044844_160044991	0.537169	LHX3,4.p2	AK025130|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr9_+_12683385_12683466	0.52792	LHX3,4.p2	NM_000550|TYRP1|7306|tyrosinase-related protein 1	X51420|TYRP1|7306|tyrosinase-related protein 1	BC052608|TYRP1|7306|tyrosinase-related protein 1
hg18_v1_chr11_-_117628211_117628310	0.525932	LHX3,4.p2	AY358626|MPZL3|196264|myelin protein zero-like 3	NM_198275|MPZL3|196264|myelin protein zero-like 3	AK095399|MPZL3|196264|myelin protein zero-like 3	AK289390|MPZL3|196264|myelin protein zero-like 3	AK296951|MPZL3|196264|myelin protein zero-like 3	BC031223|MPZL3|196264|myelin protein zero-like 3	AK304292|MPZL3|196264|myelin protein zero-like 3	AK310966|MPZL3|196264|myelin protein zero-like 3	BC113586|MPZL3|196264|myelin protein zero-like 3	BC143897|MPZL3|196264|myelin protein zero-like 3
hg18_v1_chr3_-_166278969_166278976	0.522431	LHX3,4.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr3_+_99334230_99334231	0.506065	LHX3,4.p2	NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1
hg18_v1_chr11_+_26310253_26310359	0.502841	LHX3,4.p2	NM_031418|ANO3|63982|anoctamin 3	AK302659|ANO3|63982|anoctamin 3
hg18_v1_chr10_+_129237602_129237602	0.500511	LHX3,4.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr11_-_30910074_30910074	0.499282	LHX3,4.p2	NM_020869|DCDC5|100506627|doublecortin domain containing 5
hg18_v1_chr14_+_100365390_100365443	0.491197	LHX3,4.p2	CR610233|MEG3|55384|maternally expressed 3 (non-protein coding)	CR609760|MEG3|55384|maternally expressed 3 (non-protein coding)
hg18_v1_chr4_+_68995761_68995802	0.484464	LHX3,4.p2	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E	NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E	AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E	AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E	AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E
hg18_v1_chr16_-_3783475_3783580	0.478329	LHX3,4.p2	AK304771|CREBBP|1387|CREB binding protein
hg18_v1_chr7_-_87180499_87180662	0.465928	LHX3,4.p2	NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg18_v1_chr15_+_32048380_32048380	0.464874	LHX3,4.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr21_-_26345294_26345335	0.459585	LHX3,4.p2	
hg18_v1_chr12_-_9651748_9651778	0.456148	LHX3,4.p2	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1	AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1
hg18_v1_chr4_+_78651929_78651930	0.455334	LHX3,4.p2	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13	NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13
hg18_v1_chr4_-_100492854_100492939	0.455067	LHX3,4.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg18_v1_chr3_-_114047479_114047486	0.448566	LHX3,4.p2	BC144504|CD200R1L|344807|CD200 receptor 1-like	BC144507|CD200R1L|344807|CD200 receptor 1-like	AY284976|CD200R1L|344807|CD200 receptor 1-like	AY552790|CD200R1L|344807|CD200 receptor 1-like	NM_001008784|CD200R1L|344807|CD200 receptor 1-like
hg18_v1_chr7_-_86526880_86526949	0.446097	LHX3,4.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr4_+_119174947_119175100	0.437729	LHX3,4.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr5_+_127012611_127012634	0.433103	LHX3,4.p2	NM_001048252|CTXN3|613212|cortexin 3	AB219764|CTXN3|613212|cortexin 3
hg18_v1_chr1_+_156991133_156991229	0.431753	LHX3,4.p2	BC140743|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6	NM_001005184|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6
hg18_v1_chr7_+_18296569_18296599	0.428951	LHX3,4.p2	AK097178|HDAC9|9734|histone deacetylase 9
hg18_v1_chr14_-_60185659_60186027	0.427057	LHX3,4.p2	BT007083|SIX1|6495|SIX homeobox 1	BC008874|SIX1|6495|SIX homeobox 1	NM_005982|SIX1|6495|SIX homeobox 1	X91868|SIX1|6495|SIX homeobox 1
hg18_v1_chr14_+_100365162_100365302	0.425763	LHX3,4.p2	AF052114|MEG3|55384|maternally expressed 3 (non-protein coding)	CR613369|MEG3|55384|maternally expressed 3 (non-protein coding)
hg18_v1_chr3_-_121117647_121117670	0.420576	LHX3,4.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr5_-_16795336_16795338	0.418811	LHX3,4.p2	AK316138|MYO10|4651|myosin X
hg18_v1_chr1_-_92725017_92725060	0.418245	LHX3,4.p2	U67369|GFI1|2672|growth factor independent 1 transcription repressor	NM_005263|GFI1|2672|growth factor independent 1 transcription repressor
hg18_v1_chr1_+_81544432_81544599	0.408987	LHX3,4.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg18_v1_chr14_-_46882144_46882187	0.407423	LHX3,4.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr15_+_100175888_100175912	0.406001	LHX3,4.p2	BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15
hg18_v1_chr5_+_147672181_147672219	0.398308	LHX3,4.p2	AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)
hg18_v1_chr12_+_8557402_8557595	0.393632	LHX3,4.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg18_v1_chr6_+_53043729_53043729	0.393037	LHX3,4.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr13_+_52500830_52500996	0.39045	LHX3,4.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr3_-_99236520_99236520	0.385364	LHX3,4.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr4_-_46605980_46606008	0.385019	LHX3,4.p2	BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2	BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2	NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2
hg18_v1_chr17_-_38087366_38087370	0.384409	LHX3,4.p2	AF208237|CCR10|2826|chemokine (C-C motif) receptor 10	AY429103|CCR10|2826|chemokine (C-C motif) receptor 10	EU832758|CCR10|2826|chemokine (C-C motif) receptor 10	GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10	AF215981|CCR10|2826|chemokine (C-C motif) receptor 10	BC098132|CCR10|2826|chemokine (C-C motif) receptor 10	BC098157|CCR10|2826|chemokine (C-C motif) receptor 10	BC098304|CCR10|2826|chemokine (C-C motif) receptor 10	BC099840|CCR10|2826|chemokine (C-C motif) receptor 10	NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10
hg18_v1_chr12_-_15757114_15757149	0.377788	LHX3,4.p2	AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr4_+_71330797_71330797	0.37689	LHX3,4.p2	NM_001145006|MUC7|4589|mucin 7, secreted
hg18_v1_chr9_-_14076901_14077003	0.374239	LHX3,4.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr1_+_144198658_144198802	0.37129	LHX3,4.p2	CR627381|LIX1L|128077|Lix1 homolog (mouse)-like
hg18_v1_chr3_+_73193499_73193499	0.36825	LHX3,4.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chr10_-_45131061_45131061	0.366429	LHX3,4.p2	AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1	NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1
hg18_v1_chr10_+_126620681_126620681	0.366354	LHX3,4.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr11_-_6005546_6005546	0.365914	LHX3,4.p2	BC136904|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1	BC136911|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1	NM_001001917|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1
hg18_v1_chr19_-_21985560_21985590	0.365035	LHX3,4.p2	BC038199|ZNF208|7757|zinc finger protein 208	AK096236|ZNF208|7757|zinc finger protein 208	NM_007153|ZNF208|7757|zinc finger protein 208
hg18_v1_chr13_+_47948586_47948596	0.362754	LHX3,4.p2	AK307125|RB1|5925|retinoblastoma 1
hg18_v1_chr11_-_20138445_20138445	0.362098	LHX3,4.p2	NM_001029865|DBX1|120237|developing brain homeobox 1
hg18_v1_chr4_-_20594645_20594809	0.361074	LHX3,4.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr3_-_131081910_131082091	0.360735	LHX3,4.p2	AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1	BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1	NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1
hg18_v1_chr11_-_102081654_102081677	0.360262	LHX3,4.p2	AF195192|MMP27|64066|matrix metallopeptidase 27	AY358752|MMP27|64066|matrix metallopeptidase 27	NM_022122|MMP27|64066|matrix metallopeptidase 27
hg18_v1_chrX_-_102418329_102418452	0.357363	LHX3,4.p2	BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5	BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5	CR596252|TCEAL5|340543|transcription elongation factor A (SII)-like 5	NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5
hg18_v1_chr3_-_101316038_101316046	0.356148	LHX3,4.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr4_+_88748704_88748704	0.355728	LHX3,4.p2	NM_014208|DSPP|1834|dentin sialophosphoprotein
hg18_v1_chr2_+_216695062_216695162	0.355572	LHX3,4.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr14_-_94669547_94669592	0.354779	LHX3,4.p2	HM595745|DICER1|23405|dicer 1, ribonuclease type III	NM_001195573|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr1_-_245942679_245942727	0.354379	LHX3,4.p2	NM_001005286|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1	BC137142|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1	BC137143|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1
hg18_v1_chr3_-_18455207_18455268	0.353011	LHX3,4.p2	BC001744|SATB1|6304|SATB homeobox 1	NM_001131010|SATB1|6304|SATB homeobox 1
hg18_v1_chr1_-_58920315_58920353	0.351397	LHX3,4.p2	
hg18_v1_chr11_+_55351270_55351270	0.349504	LHX3,4.p2	NM_001004739|OR5L2|26338|olfactory receptor, family 5, subfamily L, member 2
hg18_v1_chr17_-_1195096_1195116	0.349038	LHX3,4.p2	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg18_v1_chr6_+_55300225_55300225	0.348271	LHX3,4.p2	AY358198|GFRAL|389400|GDNF family receptor alpha like	NM_207410|GFRAL|389400|GDNF family receptor alpha like
hg18_v1_chr12_-_23628774_23628812	0.341177	LHX3,4.p2	NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5	AK098610|SOX5|6660|SRY (sex determining region Y)-box 5	AK223536|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr6_-_56615544_56615652	0.340062	LHX3,4.p2	AF400226|DST|667|dystonin	AF400227|DST|667|dystonin	M69225|DST|667|dystonin	BC065536|DST|667|dystonin	L11690|DST|667|dystonin	NM_001723|DST|667|dystonin	NM_015548|DST|667|dystonin
hg18_v1_chr14_+_28311740_28311753	0.339846	LHX3,4.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg18_v1_chr14_+_66901237_66901331	0.333308	LHX3,4.p2	DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr2_-_224574860_224574885	0.329866	LHX3,4.p2	M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
hg18_v1_chr7_+_94135384_94135392	0.329329	LHX3,4.p2	AF038197|PEG10|23089|paternally expressed 10
hg18_v1_chr2_-_55053398_55053426	0.326665	LHX3,4.p2	
hg18_v1_chr3_+_101316463_101316463	0.324292	LHX3,4.p2	AK300704|C3orf26|84319|chromosome 3 open reading frame 26	NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26
hg18_v1_chr6_+_55147029_55147078	0.323563	LHX3,4.p2	NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2	AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2
hg18_v1_chr6_-_152681171_152681206	0.321468	LHX3,4.p2	AY061755|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_015293|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	AK057959|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr10_+_57028755_57028806	0.319374	LHX3,4.p2	NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5
hg18_v1_chr8_+_9990471_9990475	0.312787	LHX3,4.p2	AK293488|MSRA|4482|methionine sulfoxide reductase A	AY958430|MSRA|4482|methionine sulfoxide reductase A	AY958431|MSRA|4482|methionine sulfoxide reductase A	BC047552|MSRA|4482|methionine sulfoxide reductase A	NM_001135671|MSRA|4482|methionine sulfoxide reductase A
hg18_v1_chr12_+_52708460_52708572	0.312015	LHX3,4.p2	NM_004503|HOXC6|3223|homeobox C6	S82986|HOXC6|3223|homeobox C6	BC074844|HOXC6|3223|homeobox C6	BC074845|HOXC6|3223|homeobox C6	CR456954|HOXC6|3223|homeobox C6
hg18_v1_chr13_-_34948758_34948835	0.311817	LHX3,4.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chr10_+_91142301_91142385	0.311441	LHX3,4.p2	NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR623965|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR593386|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR601585|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR591778|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR621649|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	CR617896|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1
hg18_v1_chr11_-_57883117_57883117	0.307459	LHX3,4.p2	NM_001005489|OR5B17|219965|olfactory receptor, family 5, subfamily B, member 17
hg18_v1_chr4_-_80548378_80548405	0.307357	LHX3,4.p2	DQ891321|GK2|2712|glycerol kinase 2	DQ894505|GK2|2712|glycerol kinase 2	BC058888|GK2|2712|glycerol kinase 2	BC029820|GK2|2712|glycerol kinase 2	BC048274|GK2|2712|glycerol kinase 2	X78712|GK2|2712|glycerol kinase 2	NM_033214|GK2|2712|glycerol kinase 2	AK292241|GK2|2712|glycerol kinase 2	BC027598|GK2|2712|glycerol kinase 2
hg18_v1_chr3_+_152934393_152934404	0.307305	LHX3,4.p2	BX647585|AADACL2|344752|arylacetamide deacetylase-like 2	NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2	BC065724|AADACL2|344752|arylacetamide deacetylase-like 2
hg18_v1_chr12_+_9871343_9871383	0.302531	LHX3,4.p2	AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1
hg18_v1_chr19_-_53841064_53841262	0.300471	LHX3,4.p2	AF067662|CA11|770|carbonic anhydrase XI	AB018195|CA11|770|carbonic anhydrase XI	AY358967|CA11|770|carbonic anhydrase XI	NM_001217|CA11|770|carbonic anhydrase XI
hg18_v1_chr21_-_26294332_26294369	0.299053	LHX3,4.p2	X06981|APP|351|amyloid beta (A4) precursor protein	X06982|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr14_+_69307914_69308067	0.298512	LHX3,4.p2	CR622610|SRSF5|6430|serine/arginine-rich splicing factor 5
hg18_v1_chr3_-_79899748_79899748	0.298457	LHX3,4.p2	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg18_v1_chr10_+_17310475_17310610	0.294117	LHX3,4.p2	BC066956|VIM|7431|vimentin
hg18_v1_chrX_+_153186602_153186602	0.293657	LHX3,4.p2	NM_001145934|TKTL1|8277|transketolase-like 1
hg18_v1_chr6_-_116799548_116799576	0.292555	LHX3,4.p2	AK298559|LOC100287467|100287467|hypothetical LOC100287467	AK316303|LOC100287467|100287467|hypothetical LOC100287467
hg18_v1_chr18_-_49944986_49944994	0.291358	LHX3,4.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr6_-_132952517_132952569	0.291013	LHX3,4.p2	AF021818|TAAR5|9038|trace amine associated receptor 5	BC069171|TAAR5|9038|trace amine associated receptor 5	BC095541|TAAR5|9038|trace amine associated receptor 5	BC112209|TAAR5|9038|trace amine associated receptor 5	BC112211|TAAR5|9038|trace amine associated receptor 5	NM_003967|TAAR5|9038|trace amine associated receptor 5
hg18_v1_chr15_-_48345453_48345453	0.290479	LHX3,4.p2	AK308833|HDC|3067|histidine decarboxylase	NM_002112|HDC|3067|histidine decarboxylase
hg18_v1_chr14_+_61532293_61532490	0.290371	LHX3,4.p2	AJ617628|SYT16|83851|synaptotagmin XVI	NM_031914|SYT16|83851|synaptotagmin XVI	BC117363|SYT16|83851|synaptotagmin XVI	BC143598|SYT16|83851|synaptotagmin XVI	AB102949|SYT16|83851|synaptotagmin XVI
hg18_v1_chr3_-_121065112_121065117	0.286854	LHX3,4.p2	
hg18_v1_chr2_+_170074457_170074534	0.286796	LHX3,4.p2	AF333387|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	NM_006063|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	AK316571|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	BC006534|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	AF056929|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	DQ896002|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10	EU176397|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10
hg18_v1_chr11_-_124478414_124478414	0.286636	LHX3,4.p2	NM_001080546|TMEM218|219854|transmembrane protein 218
hg18_v1_chr5_-_160211623_160211796	0.286037	LHX3,4.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr11_-_26550243_26550390	0.285248	LHX3,4.p2	AK128337|MUC15|143662|mucin 15, cell surface associated	AJ417818|MUC15|143662|mucin 15, cell surface associated	AJ507429|MUC15|143662|mucin 15, cell surface associated	BC058007|MUC15|143662|mucin 15, cell surface associated	AY358668|MUC15|143662|mucin 15, cell surface associated	BC020912|MUC15|143662|mucin 15, cell surface associated	NM_001135091|MUC15|143662|mucin 15, cell surface associated	NM_001135092|MUC15|143662|mucin 15, cell surface associated	NM_145650|MUC15|143662|mucin 15, cell surface associated
hg18_v1_chr6_-_109795925_109796012	0.283754	LHX3,4.p2	CR622213|CD164|8763|CD164 molecule, sialomucin
hg18_v1_chr1_+_62835759_62835825	0.279544	LHX3,4.p2	CR600651|ANGPTL3|27329|angiopoietin-like 3	NM_014495|ANGPTL3|27329|angiopoietin-like 3	AK315304|ANGPTL3|27329|angiopoietin-like 3	AK289426|ANGPTL3|27329|angiopoietin-like 3	BC007059|ANGPTL3|27329|angiopoietin-like 3	BC058287|ANGPTL3|27329|angiopoietin-like 3	AY358273|ANGPTL3|27329|angiopoietin-like 3	AF152562|ANGPTL3|27329|angiopoietin-like 3
hg18_v1_chrX_+_56772391_56772442	0.276043	LHX3,4.p2	BX537532|LOC550643|550643|hypothetical LOC550643	BC048131|LOC550643|550643|hypothetical LOC550643	BC053960|LOC550643|550643|hypothetical LOC550643	BC053962|LOC550643|550643|hypothetical LOC550643	BC062451|LOC550643|550643|hypothetical LOC550643
hg18_v1_chr2_+_225973845_225973934	0.275866	LHX3,4.p2	NM_020864|KIAA1486|57624|KIAA1486	BC131727|KIAA1486|57624|KIAA1486	AB040919|KIAA1486|57624|KIAA1486
hg18_v1_chrX_-_62697473_62697712	0.27402	LHX3,4.p2	AK001756|LOC92249|92249|hypothetical LOC92249	AL080202|LOC92249|92249|hypothetical LOC92249	CR623141|LOC92249|92249|hypothetical LOC92249
hg18_v1_chr1_-_150398327_150398327	0.273196	LHX3,4.p2	AY396742|RPTN|126638|repetin	NM_001122965|RPTN|126638|repetin
hg18_v1_chr3_-_71860958_71860958	0.27307	LHX3,4.p2	NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3
hg18_v1_chr11_+_63282639_63282686	0.27291	LHX3,4.p2	CR596154|RTN3|10313|reticulon 3
hg18_v1_chr22_+_42726423_42726505	0.271157	LHX3,4.p2	AF303887|PARVB|29780|parvin, beta	NM_001003828|PARVB|29780|parvin, beta
hg18_v1_chr8_-_91164100_91164282	0.270848	LHX3,4.p2	X06661|CALB1|793|calbindin 1, 28kDa	BC006478|CALB1|793|calbindin 1, 28kDa	AK054881|CALB1|793|calbindin 1, 28kDa	AK312491|CALB1|793|calbindin 1, 28kDa	BC020864|CALB1|793|calbindin 1, 28kDa	NM_004929|CALB1|793|calbindin 1, 28kDa
hg18_v1_chr22_-_15682555_15682583	0.269777	LHX3,4.p2	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3	NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3
hg18_v1_chr9_-_21295311_21295311	0.269013	LHX3,4.p2	BC093755|IFNA5|3442|interferon, alpha 5	BC093757|IFNA5|3442|interferon, alpha 5	NM_002169|IFNA5|3442|interferon, alpha 5
hg18_v1_chr5_-_58331515_58331515	0.26898	LHX3,4.p2	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr1_-_230717850_230717934	0.268842	LHX3,4.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg18_v1_chr2_+_183316574_183316616	0.2681	LHX3,4.p2	AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10
hg18_v1_chr13_+_77007809_77007895	0.266284	LHX3,4.p2	NM_001160706|SCEL|8796|sciellin	NM_003843|SCEL|8796|sciellin	NM_144777|SCEL|8796|sciellin	BC020726|SCEL|8796|sciellin	AF045941|SCEL|8796|sciellin	AK025320|SCEL|8796|sciellin	AK222720|SCEL|8796|sciellin	AK301659|SCEL|8796|sciellin
hg18_v1_chr1_-_188713324_188713393	0.265383	LHX3,4.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr3_-_159872960_159873175	0.264913	LHX3,4.p2	EU831968|LXN|56925|latexin	EU832061|LXN|56925|latexin	CR605027|LXN|56925|latexin	AF087851|LXN|56925|latexin	AF282594|LXN|56925|latexin	AF282626|LXN|56925|latexin	BC008438|LXN|56925|latexin	CR622283|LXN|56925|latexin	BC005346|LXN|56925|latexin	NM_020169|LXN|56925|latexin
hg18_v1_chr10_-_48426868_48426990	0.264416	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg18_v1_chr1_-_214963279_214963429	0.262996	LHX3,4.p2	AF117255|ESRRG|2104|estrogen-related receptor gamma	BC008218|ESRRG|2104|estrogen-related receptor gamma	AY388456|ESRRG|2104|estrogen-related receptor gamma	AK291647|ESRRG|2104|estrogen-related receptor gamma	AB020639|ESRRG|2104|estrogen-related receptor gamma	AK290945|ESRRG|2104|estrogen-related receptor gamma	BC064700|ESRRG|2104|estrogen-related receptor gamma	NM_001438|ESRRG|2104|estrogen-related receptor gamma
hg18_v1_chr11_-_5766621_5766621	0.262796	LHX3,4.p2	NM_001001913|OR52N1|79473|olfactory receptor, family 52, subfamily N, member 1
hg18_v1_chr10_-_50066386_50066479	0.262368	LHX3,4.p2	DQ884399|C10orf128|170371|chromosome 10 open reading frame 128	BC047724|C10orf128|170371|chromosome 10 open reading frame 128	BC104438|C10orf128|170371|chromosome 10 open reading frame 128	BC104439|C10orf128|170371|chromosome 10 open reading frame 128	NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128	CR624206|C10orf128|170371|chromosome 10 open reading frame 128	CR618023|C10orf128|170371|chromosome 10 open reading frame 128	CR607332|C10orf128|170371|chromosome 10 open reading frame 128	BC037922|C10orf128|170371|chromosome 10 open reading frame 128	BC042857|C10orf128|170371|chromosome 10 open reading frame 128
hg18_v1_chr14_+_28305922_28306037	0.262153	LHX3,4.p2	X74142|FOXG1|2290|forkhead box G1	X74143|FOXG1|2290|forkhead box G1	NM_005249|FOXG1|2290|forkhead box G1
hg18_v1_chr5_-_145232723_145232723	0.261474	LHX3,4.p2	NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2
hg18_v1_chr1_-_157014048_157014048	0.261062	LHX3,4.p2	NM_001005278|OR6N2|81442|olfactory receptor, family 6, subfamily N, member 2
hg18_v1_chr9_-_74757735_74757796	0.260711	LHX3,4.p2	AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg18_v1_chr6_-_144427340_144427427	0.260373	LHX3,4.p2	EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1	EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1	NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1
hg18_v1_chr18_+_64616296_64616349	0.26035	LHX3,4.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg18_v1_chr4_-_87593306_87593389	0.259503	LHX3,4.p2	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10	U07620|MAPK10|5602|mitogen-activated protein kinase 10	BC051731|MAPK10|5602|mitogen-activated protein kinase 10	AK225974|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr3_+_103029523_103029777	0.258253	LHX3,4.p2	NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
hg18_v1_chr4_+_5577783_5577829	0.25722	LHX3,4.p2	D82070|C4orf6|10141|chromosome 4 open reading frame 6	NM_005750|C4orf6|10141|chromosome 4 open reading frame 6	BC117444|C4orf6|10141|chromosome 4 open reading frame 6	BC117446|C4orf6|10141|chromosome 4 open reading frame 6
hg18_v1_chr7_+_129057152_129057154	0.256039	LHX3,4.p2	L22454|NRF1|4899|nuclear respiratory factor 1	NM_001040110|NRF1|4899|nuclear respiratory factor 1
hg18_v1_chr11_-_89181390_89181390	0.255623	LHX3,4.p2	AB037682|TRIM49|57093|tripartite motif containing 49	NM_020358|TRIM49|57093|tripartite motif containing 49
hg18_v1_chr16_+_68284252_68284329	0.253081	LHX3,4.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr13_+_108046500_108046530	0.250407	LHX3,4.p2	AB020672|MYO16|23026|myosin XVI	BC146791|MYO16|23026|myosin XVI	NM_015011|MYO16|23026|myosin XVI	AL834447|MYO16|23026|myosin XVI
hg18_v1_chr1_-_152394215_152394215	0.248671	LHX3,4.p2	AK128000|NUP210L|91181|nucleoporin 210kDa-like	NM_001159484|NUP210L|91181|nucleoporin 210kDa-like	NM_207308|NUP210L|91181|nucleoporin 210kDa-like
hg18_v1_chr9_-_21340885_21340885	0.246303	LHX3,4.p2	BC069471|IFNA6|3443|interferon, alpha 6	BC096697|IFNA6|3443|interferon, alpha 6	BC096710|IFNA6|3443|interferon, alpha 6	BC096730|IFNA6|3443|interferon, alpha 6	BC098357|IFNA6|3443|interferon, alpha 6	NM_021002|IFNA6|3443|interferon, alpha 6
hg18_v1_chr3_-_52269467_52269508	0.245649	LHX3,4.p2	BC018941|WDR82|80335|WD repeat domain 82	AK074290|WDR82|80335|WD repeat domain 82
hg18_v1_chr1_-_143708467_143708467	0.242248	LHX3,4.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr18_+_31488530_31488624	0.241497	LHX3,4.p2	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)
hg18_v1_chr8_+_36760999_36761058	0.240854	LHX3,4.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg18_v1_chr17_-_60439764_60439772	0.240709	LHX3,4.p2	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13
hg18_v1_chr9_-_28709302_28709302	0.238381	LHX3,4.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg18_v1_chr17_-_9635325_9635338	0.238264	LHX3,4.p2	NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C	BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C
hg18_v1_chr18_+_28023984_28024006	0.2375	LHX3,4.p2	AY695931|MEP1B|4225|meprin A, beta	NM_005925|MEP1B|4225|meprin A, beta	X81333|MEP1B|4225|meprin A, beta	BC136559|MEP1B|4225|meprin A, beta	BC144244|MEP1B|4225|meprin A, beta
hg18_v1_chr14_+_95915774_95915774	0.23646	LHX3,4.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr11_+_91724909_91724909	0.235886	LHX3,4.p2	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)
hg18_v1_chr5_+_132237253_132237258	0.235196	LHX3,4.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chrX_-_55074125_55074221	0.232504	LHX3,4.p2	CR620984|ALAS2|212|aminolevulinate, delta-, synthase 2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg18_v1_chr19_+_21056792_21056895	0.229871	LHX3,4.p2	NM_182515|ZNF714|148206|zinc finger protein 714	AK056006|ZNF714|148206|zinc finger protein 714	BC022527|ZNF714|148206|zinc finger protein 714	BC037782|ZNF714|148206|zinc finger protein 714	BC050468|ZNF714|148206|zinc finger protein 714	BC064985|ZNF714|148206|zinc finger protein 714
hg18_v1_chr12_+_8499788_8499951	0.229157	LHX3,4.p2	AK308011|CLEC6A|93978|C-type lectin domain family 6, member A	AY321309|CLEC6A|93978|C-type lectin domain family 6, member A	NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A	AY365135|CLEC6A|93978|C-type lectin domain family 6, member A	BC132933|CLEC6A|93978|C-type lectin domain family 6, member A	BC132935|CLEC6A|93978|C-type lectin domain family 6, member A
hg18_v1_chr16_+_2749934_2750071	0.228692	LHX3,4.p2	
hg18_v1_chr20_+_2892918_2892935	0.228604	LHX3,4.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr16_+_24696069_24696181	0.226697	LHX3,4.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr3_-_64186151_64186170	0.226145	LHX3,4.p2	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)	AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)	NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)
hg18_v1_chrX_+_55951280_55951389	0.225359	LHX3,4.p2	
hg18_v1_chrX_-_142432884_142432972	0.224905	LHX3,4.p2	DQ336128|SPANXN3|139067|SPANX family, member N3	DQ336129|SPANXN3|139067|SPANX family, member N3	BC062750|SPANXN3|139067|SPANX family, member N3	NM_001009609|SPANXN3|139067|SPANX family, member N3
hg18_v1_chr20_+_23293020_23293020	0.224645	LHX3,4.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chr8_-_82536312_82536312	0.223832	LHX3,4.p2	NM_001080526|FABP9|646480|fatty acid binding protein 9, testis
hg18_v1_chr4_-_69116839_69116839	0.223605	LHX3,4.p2	NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17	U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17
hg18_v1_chr9_-_21375258_21375395	0.222718	LHX3,4.p2	AY255838|IFNA2|3440|interferon, alpha 2	V00548|IFNA2|3440|interferon, alpha 2	CR541921|IFNA2|3440|interferon, alpha 2	BC074936|IFNA2|3440|interferon, alpha 2	BC074937|IFNA2|3440|interferon, alpha 2	BC104163|IFNA2|3440|interferon, alpha 2	BC104164|IFNA2|3440|interferon, alpha 2	M54886|IFNA2|3440|interferon, alpha 2	V00544|IFNA2|3440|interferon, alpha 2	V00549|IFNA2|3440|interferon, alpha 2	NM_000605|IFNA2|3440|interferon, alpha 2
hg18_v1_chr3_+_99288706_99288706	0.222697	LHX3,4.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr14_+_55148488_55148517	0.22258	LHX3,4.p2	L25616|KTN1|3895|kinectin 1 (kinesin receptor)
hg18_v1_chr12_-_52281050_52281071	0.221523	LHX3,4.p2	X57197|ATF7|11016|activating transcription factor 7	NM_001130059|ATF7|11016|activating transcription factor 7
hg18_v1_chr8_+_70541631_70541638	0.217522	LHX3,4.p2	AK307951|SULF1|23213|sulfatase 1
hg18_v1_chr21_-_18697829_18697843	0.216724	LHX3,4.p2	BC111749|TMPRSS15|5651|transmembrane protease, serine 15	NM_002772|TMPRSS15|5651|transmembrane protease, serine 15	U09860|TMPRSS15|5651|transmembrane protease, serine 15
hg18_v1_chr3_+_174598937_174598937	0.216433	LHX3,4.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr19_+_9157269_9157269	0.215455	LHX3,4.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg18_v1_chr7_+_90176647_90176791	0.215449	LHX3,4.p2	AB020641|CDK14|5218|cyclin-dependent kinase 14	BC152436|CDK14|5218|cyclin-dependent kinase 14	BC167152|CDK14|5218|cyclin-dependent kinase 14	BC167156|CDK14|5218|cyclin-dependent kinase 14	NM_012395|CDK14|5218|cyclin-dependent kinase 14	BC136477|CDK14|5218|cyclin-dependent kinase 14	AK289782|CDK14|5218|cyclin-dependent kinase 14	BC152388|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr7_+_111908143_111908301	0.215221	LHX3,4.p2	NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53	BC031976|C7orf53|286006|chromosome 7 open reading frame 53	AK096894|C7orf53|286006|chromosome 7 open reading frame 53	NM_182597|C7orf53|286006|chromosome 7 open reading frame 53
hg18_v1_chr13_-_59485299_59485343	0.213701	LHX3,4.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg18_v1_chr15_+_43331719_43331748	0.213535	LHX3,4.p2	AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
hg18_v1_chr2_-_133895795_133895854	0.21333	LHX3,4.p2	AK092189|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chr12_-_16321885_16321885	0.212556	LHX3,4.p2	NM_001170798|SLC15A5|729025|solute carrier family 15, member 5
hg18_v1_chr1_+_172683834_172683872	0.211102	LHX3,4.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr6_+_114285209_114285646	0.210583	LHX3,4.p2	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate	EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate
hg18_v1_chr1_-_195818927_195818983	0.209995	LHX3,4.p2	AK000061|DENND1B|163486|DENN/MADD domain containing 1B
hg18_v1_chr1_-_21310462_21310462	0.20992	LHX3,4.p2	AF012072|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_003760|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr3_+_46628928_46628928	0.209876	LHX3,4.p2	AK130758|LOC100132146|100132146|hypothetical LOC100132146	NM_001195442|LOC100132146|100132146|hypothetical LOC100132146
hg18_v1_chr18_+_59767567_59767567	0.207618	LHX3,4.p2	NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing
hg18_v1_chr10_+_118295417_118295594	0.207524	LHX3,4.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg18_v1_chr4_+_176076083_176076133	0.206488	LHX3,4.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chr1_+_57093030_57093138	0.204905	LHX3,4.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide
hg18_v1_chr3_-_143201878_143201918	0.204667	LHX3,4.p2	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr9_+_6231677_6231694	0.203438	LHX3,4.p2	NM_033439|IL33|90865|interleukin 33	AB024518|IL33|90865|interleukin 33	AY905581|IL33|90865|interleukin 33	CR407619|IL33|90865|interleukin 33
hg18_v1_chr5_+_67622242_67622383	0.203088	LHX3,4.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr4_-_64957595_64957788	0.200488	LHX3,4.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg18_v1_chr4_+_71298187_71298281	0.199526	LHX3,4.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg18_v1_chr15_+_22781292_22781342	0.197195	LHX3,4.p2	AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5
hg18_v1_chr11_+_55776251_55776251	0.196139	LHX3,4.p2	NM_001004747|OR5T3|390154|olfactory receptor, family 5, subfamily T, member 3
hg18_v1_chrX_+_115215985_115216061	0.196061	LHX3,4.p2	AK313927|AGTR2|186|angiotensin II receptor, type 2	NM_000686|AGTR2|186|angiotensin II receptor, type 2	X87723|AGTR2|186|angiotensin II receptor, type 2	U16957|AGTR2|186|angiotensin II receptor, type 2
hg18_v1_chr12_+_28301399_28301415	0.195312	LHX3,4.p2	AY289196|CCDC91|55297|coiled-coil domain containing 91	NM_018318|CCDC91|55297|coiled-coil domain containing 91
hg18_v1_chr21_-_31175722_31175744	0.195125	LHX3,4.p2	AB096963|KRTAP11-1|337880|keratin associated protein 11-1	BC130555|KRTAP11-1|337880|keratin associated protein 11-1	BC130557|KRTAP11-1|337880|keratin associated protein 11-1	AJ457065|KRTAP11-1|337880|keratin associated protein 11-1	NM_175858|KRTAP11-1|337880|keratin associated protein 11-1
hg18_v1_chr2_-_166638376_166638425	0.194011	LHX3,4.p2	AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit
hg18_v1_chr15_-_68781662_68781700	0.192682	LHX3,4.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr11_-_55460451_55460451	0.189858	LHX3,4.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr1_+_111634996_111635060	0.18922	LHX3,4.p2	AK290702|CHIA|27159|chitinase, acidic	AB025008|CHIA|27159|chitinase, acidic	AB025009|CHIA|27159|chitinase, acidic	AY825504|CHIA|27159|chitinase, acidic	NM_021797|CHIA|27159|chitinase, acidic	AF290004|CHIA|27159|chitinase, acidic	AY789444|CHIA|27159|chitinase, acidic	NM_201653|CHIA|27159|chitinase, acidic
hg18_v1_chrX_-_138552517_138552665	0.188004	LHX3,4.p2	X12556|MCF2|4168|MCF.2 cell line derived transforming sequence	AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence	AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence	NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence
hg18_v1_chr12_+_79362256_79362256	0.188002	LHX3,4.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr4_-_155731288_155731348	0.187685	LHX3,4.p2	BC098280|FGA|2243|fibrinogen alpha chain	BC099706|FGA|2243|fibrinogen alpha chain	BC099720|FGA|2243|fibrinogen alpha chain	BC101935|FGA|2243|fibrinogen alpha chain	J00127|FGA|2243|fibrinogen alpha chain	CR618112|FGA|2243|fibrinogen alpha chain	CR608485|FGA|2243|fibrinogen alpha chain	AK290559|FGA|2243|fibrinogen alpha chain	J00128|FGA|2243|fibrinogen alpha chain	BC020764|FGA|2243|fibrinogen alpha chain	BC070246|FGA|2243|fibrinogen alpha chain	BC105803|FGA|2243|fibrinogen alpha chain	NM_000508|FGA|2243|fibrinogen alpha chain	NM_021871|FGA|2243|fibrinogen alpha chain
hg18_v1_chr11_-_56166490_56166522	0.187486	LHX3,4.p2	NM_001002925|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2	BC136989|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2	BC136990|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2
hg18_v1_chr21_-_30781537_30781625	0.187029	LHX3,4.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg18_v1_chr7_-_44547382_44547438	0.18645	LHX3,4.p2	AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1
hg18_v1_chr5_+_57823017_57823086	0.185051	LHX3,4.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr12_-_25041639_25041719	0.184951	LHX3,4.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr9_-_111230926_111231143	0.184776	LHX3,4.p2	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3
hg18_v1_chr8_-_18710575_18710684	0.184165	LHX3,4.p2	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3	AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr9_-_8723893_8723945	0.183287	LHX3,4.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr10_+_5228756_5228834	0.182643	LHX3,4.p2	AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)	D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)
hg18_v1_chrX_+_85404626_85404626	0.182018	LHX3,4.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg18_v1_chr3_-_121445831_121445831	0.180819	LHX3,4.p2	NM_001168271|GPR156|165829|G protein-coupled receptor 156	NM_153002|GPR156|165829|G protein-coupled receptor 156
hg18_v1_chr1_-_211087570_211087613	0.180484	LHX3,4.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg18_v1_chr11_-_104332631_104332631	0.180226	LHX3,4.p2	NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase
hg18_v1_chr3_-_21767819_21767819	0.179696	LHX3,4.p2	AK026072|ZNF385D|79750|zinc finger protein 385D	NM_024697|ZNF385D|79750|zinc finger protein 385D
hg18_v1_chr14_-_106249999_106250382	0.17918	LHX3,4.p2	AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1
hg18_v1_chr2_+_234302511_234302511	0.179059	LHX3,4.p2	AY435138|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3	NM_019093|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3
hg18_v1_chr8_+_54926920_54927012	0.178713	LHX3,4.p2	AY046538|RGS20|8601|regulator of G-protein signaling 20	NM_170587|RGS20|8601|regulator of G-protein signaling 20	AF366054|RGS20|8601|regulator of G-protein signaling 20	AF366055|RGS20|8601|regulator of G-protein signaling 20	AF366056|RGS20|8601|regulator of G-protein signaling 20
hg18_v1_chr8_+_144802972_144803185	0.178672	LHX3,4.p2	AB014528|ZNF623|9831|zinc finger protein 623	BC067516|ZNF623|9831|zinc finger protein 623	BC067517|ZNF623|9831|zinc finger protein 623	BC067518|ZNF623|9831|zinc finger protein 623	NM_014789|ZNF623|9831|zinc finger protein 623	BC075056|ZNF623|9831|zinc finger protein 623	BC075057|ZNF623|9831|zinc finger protein 623	EU446754|ZNF623|9831|zinc finger protein 623
hg18_v1_chr9_-_16717887_16717908	0.178656	LHX3,4.p2	AY438376|BNC2|54796|basonuclin 2
hg18_v1_chr9_-_92444886_92444992	0.178241	LHX3,4.p2	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2	NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2
hg18_v1_chr5_-_58607673_58607701	0.176305	LHX3,4.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr12_-_10846435_10846492	0.176057	LHX3,4.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr7_+_90177082_90177111	0.175613	LHX3,4.p2	AK295086|CDK14|5218|cyclin-dependent kinase 14	AK296406|CDK14|5218|cyclin-dependent kinase 14	AK307484|CDK14|5218|cyclin-dependent kinase 14	AK316026|CDK14|5218|cyclin-dependent kinase 14
hg18_v1_chr11_+_44026106_44026140	0.175356	LHX3,4.p2	AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like
hg18_v1_chr2_+_102456193_102456193	0.174954	LHX3,4.p2	CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4	NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4
hg18_v1_chr2_-_206790871_206791015	0.174767	LHX3,4.p2	AK312917|GPR1|2825|G protein-coupled receptor 1	BC067833|GPR1|2825|G protein-coupled receptor 1	AK290976|GPR1|2825|G protein-coupled receptor 1	NM_001098199|GPR1|2825|G protein-coupled receptor 1	NM_005279|GPR1|2825|G protein-coupled receptor 1
hg18_v1_chrX_+_84145487_84145560	0.173666	LHX3,4.p2	AK130506|APOOL|139322|apolipoprotein O-like	NM_198450|APOOL|139322|apolipoprotein O-like	AY358193|APOOL|139322|apolipoprotein O-like	BC107096|APOOL|139322|apolipoprotein O-like	CR749250|APOOL|139322|apolipoprotein O-like
hg18_v1_chr3_-_147806692_147806692	0.172644	LHX3,4.p2	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5	NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5
hg18_v1_chr6_+_154373323_154373328	0.172557	LHX3,4.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chr5_+_95092384_95092865	0.171069	LHX3,4.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr9_-_35962454_35962549	0.170947	LHX3,4.p2	M83234|YBX1|4904|Y box binding protein 1	M85234|YBX1|4904|Y box binding protein 1
hg18_v1_chr13_+_100902942_100903050	0.170148	LHX3,4.p2	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)
hg18_v1_chr8_-_110730183_110730307	0.169642	LHX3,4.p2	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)	AB195676|SYBU|55638|syntabulin (syntaxin-interacting)	AB195677|SYBU|55638|syntabulin (syntaxin-interacting)	AB195678|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)	NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr14_-_73095396_73095403	0.169149	LHX3,4.p2	AK093515|HEATR4|399671|HEAT repeat containing 4	BC047590|HEATR4|399671|HEAT repeat containing 4	NM_203309|HEATR4|399671|HEAT repeat containing 4
hg18_v1_chr15_-_75364387_75364387	0.169073	LHX3,4.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr3_+_99370233_99370233	0.16896	LHX3,4.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr10_-_21847126_21847194	0.168628	LHX3,4.p2	
hg18_v1_chr1_+_103999663_103999664	0.168065	LHX3,4.p2	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)	AK292341|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr9_-_94338072_94338194	0.16802	LHX3,4.p2	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific
hg18_v1_chr1_+_195123766_195123855	0.168015	LHX3,4.p2	AK292752|CFHR4|10877|complement factor H-related 4	NM_006684|CFHR4|10877|complement factor H-related 4	X98337|CFHR4|10877|complement factor H-related 4	AJ640130|CFHR4|10877|complement factor H-related 4	BC074957|CFHR4|10877|complement factor H-related 4
hg18_v1_chrX_+_14457340_14457403	0.167755	LHX3,4.p2	AK312591|GLRA2|2742|glycine receptor, alpha 2	NM_001118885|GLRA2|2742|glycine receptor, alpha 2	NM_001118886|GLRA2|2742|glycine receptor, alpha 2	NM_001171942|GLRA2|2742|glycine receptor, alpha 2	NM_002063|GLRA2|2742|glycine receptor, alpha 2	AK297304|GLRA2|2742|glycine receptor, alpha 2
hg18_v1_chr5_+_179065282_179065434	0.167335	LHX3,4.p2	BC050534|CANX|821|calnexin	DQ890627|CANX|821|calnexin	DQ893794|CANX|821|calnexin
hg18_v1_chr13_+_51933228_51933360	0.167088	LHX3,4.p2	AL136848|CKAP2|26586|cytoskeleton associated protein 2
hg18_v1_chr2_+_28892366_28892384	0.166598	LHX3,4.p2	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)	AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)
hg18_v1_chr5_-_22889192_22889215	0.165496	LHX3,4.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr11_+_6854431_6854454	0.165458	LHX3,4.p2	BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4
hg18_v1_chr1_-_156635879_156635879	0.164616	LHX3,4.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr20_+_9146036_9146081	0.164468	LHX3,4.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr2_-_36929520_36929549	0.164133	LHX3,4.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr7_-_108311872_108311872	0.163299	LHX3,4.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr12_-_10853940_10854033	0.163211	LHX3,4.p2	BC069066|TAS2R9|50835|taste receptor, type 2, member 9	BC095519|TAS2R9|50835|taste receptor, type 2, member 9	NM_023917|TAS2R9|50835|taste receptor, type 2, member 9
hg18_v1_chr7_+_113853790_113853942	0.162339	LHX3,4.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr12_-_44919818_44919942	0.161998	LHX3,4.p2	AK074851|SLC38A1|81539|solute carrier family 38, member 1	DQ891017|SLC38A1|81539|solute carrier family 38, member 1	EU176550|SLC38A1|81539|solute carrier family 38, member 1	AK074949|SLC38A1|81539|solute carrier family 38, member 1	AK313731|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr11_-_26700121_26700149	0.161971	LHX3,4.p2	BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12
hg18_v1_chr7_-_36991189_36991189	0.161881	LHX3,4.p2	BC064635|ELMO1|9844|engulfment and cell motility 1	NM_001039459|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr1_-_103269356_103269387	0.161498	LHX3,4.p2	AB208844|COL11A1|1301|collagen, type XI, alpha 1
hg18_v1_chr5_+_147695314_147695343	0.161427	LHX3,4.p2	AY396740|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	NM_001040433|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	BC137530|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	BC137531|SPINK9|643394|serine peptidase inhibitor, Kazal type 9
hg18_v1_chr8_-_7207899_7207899	0.161265	LHX3,4.p2	NM_001164457|ZNF705G|100131980|zinc finger protein 705G
hg18_v1_chr1_-_209373937_209374079	0.160627	LHX3,4.p2	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1	NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1
hg18_v1_chr22_+_29808845_29808899	0.159721	LHX3,4.p2	AK304084|SMTN|6525|smoothelin
hg18_v1_chr3_-_52688768_52688778	0.159383	LHX3,4.p2	AY281068|PBRM1|55193|polybromo 1	AF177387|PBRM1|55193|polybromo 1	AF225870|PBRM1|55193|polybromo 1	AF225871|PBRM1|55193|polybromo 1	AF225872|PBRM1|55193|polybromo 1	BC115009|PBRM1|55193|polybromo 1	BC115010|PBRM1|55193|polybromo 1	BC115011|PBRM1|55193|polybromo 1	BC116450|PBRM1|55193|polybromo 1	BC129934|PBRM1|55193|polybromo 1	BC129935|PBRM1|55193|polybromo 1	NM_018165|PBRM1|55193|polybromo 1	NM_181042|PBRM1|55193|polybromo 1
hg18_v1_chr8_+_70541412_70541426	0.158977	LHX3,4.p2	AK095341|SULF1|23213|sulfatase 1	NM_001128204|SULF1|23213|sulfatase 1	NM_015170|SULF1|23213|sulfatase 1	AF545571|SULF1|23213|sulfatase 1
hg18_v1_chr15_+_49988882_49988922	0.158102	LHX3,4.p2	AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)
hg18_v1_chr11_-_22838547_22838547	0.157557	LHX3,4.p2	NM_001195637|LOC100500938|100500938|hypothetical LOC100500938
hg18_v1_chr6_+_129245978_129246034	0.156961	LHX3,4.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg18_v1_chr9_-_106420305_106420305	0.15524	LHX3,4.p2	NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9
hg18_v1_chr9_+_12764988_12765045	0.155012	LHX3,4.p2	CR607491|C9orf150|286343|chromosome 9 open reading frame 150	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg18_v1_chr4_-_170314382_170314407	0.154881	LHX3,4.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr8_-_132122016_132122016	0.154638	LHX3,4.p2	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)
hg18_v1_chr13_-_83354425_83354428	0.154088	LHX3,4.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr5_+_176744037_176744060	0.153791	LHX3,4.p2	AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1	L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1
hg18_v1_chr5_-_22889487_22889487	0.153258	LHX3,4.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr7_-_122126422_122126445	0.153193	LHX3,4.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg18_v1_chr14_-_105610144_105610625	0.151441	LHX3,4.p2	BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1	BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chrX_+_7147471_7147532	0.151277	LHX3,4.p2	CR618192|STS|412|steroid sulfatase (microsomal), isozyme S	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S	M16505|STS|412|steroid sulfatase (microsomal), isozyme S	J04964|STS|412|steroid sulfatase (microsomal), isozyme S	AK314034|STS|412|steroid sulfatase (microsomal), isozyme S
hg18_v1_chr2_+_228064531_228064539	0.151163	LHX3,4.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr10_-_46039941_46040063	0.150305	LHX3,4.p2	AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A
hg18_v1_chr5_+_60969392_60969392	0.150146	LHX3,4.p2	AK094862|FLJ37543|285668|hypothetical protein FLJ37543	NM_173667|FLJ37543|285668|hypothetical protein FLJ37543
hg18_v1_chr3_+_52212969_52212975	0.150118	LHX3,4.p2	CR590706|ALAS1|211|aminolevulinate, delta-, synthase 1
hg18_v1_chr8_-_7200278_7200294	0.149809	LHX3,4.p2	AK302471|FAM66B|100128890|family with sequence similarity 66, member B
hg18_v1_chr12_+_50342814_50342868	0.149037	LHX3,4.p2	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit
hg18_v1_chr12_+_111408667_111408737	0.148993	LHX3,4.p2	
hg18_v1_chr4_+_74505710_74505743	0.148525	LHX3,4.p2	
hg18_v1_chr10_+_118073929_118073929	0.148118	LHX3,4.p2	BC044830|C10orf96|374355|chromosome 10 open reading frame 96	NM_198515|C10orf96|374355|chromosome 10 open reading frame 96
hg18_v1_chr17_-_1211263_1211335	0.148069	LHX3,4.p2	CR609773|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
hg18_v1_chr19_+_53891039_53891107	0.147907	LHX3,4.p2	NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)	NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)	AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)	D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)	BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)
hg18_v1_chr17_+_41945391_41945391	0.147822	LHX3,4.p2	BC040501|LRRC37A|9884|leucine rich repeat containing 37A	CR749232|LRRC37A|9884|leucine rich repeat containing 37A	NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2
hg18_v1_chr4_+_15080586_15080759	0.147161	LHX3,4.p2	NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A	NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A	NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A	AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A	CR602853|CC2D2A|57545|coiled-coil and C2 domain containing 2A	AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A	CR622306|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A	EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr4_+_169789327_169789415	0.146608	LHX3,4.p2	NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein	AK095512|PALLD|23022|palladin, cytoskeletal associated protein
hg18_v1_chr4_-_91979113_91979291	0.146003	LHX3,4.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr19_+_57492236_57492262	0.145634	LHX3,4.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chr8_-_102005697_102005703	0.145487	LHX3,4.p2	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
hg18_v1_chr4_-_185921384_185921392	0.145081	LHX3,4.p2	CR598751|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr8_+_133060353_133060429	0.144788	LHX3,4.p2	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)
hg18_v1_chr21_+_29374743_29374743	0.1446	LHX3,4.p2	AY171599|C21orf7|56911|chromosome 21 open reading frame 7	NM_020152|C21orf7|56911|chromosome 21 open reading frame 7
hg18_v1_chr4_+_88790477_88790482	0.143769	LHX3,4.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg18_v1_chr7_+_110518297_110518421	0.143657	LHX3,4.p2	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3	NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3	NM_018334|LRRN3|54674|leucine rich repeat neuronal 3	AK001991|LRRN3|54674|leucine rich repeat neuronal 3	BC035133|LRRN3|54674|leucine rich repeat neuronal 3
hg18_v1_chr9_+_74956494_74956600	0.142884	LHX3,4.p2	CR600988|ANXA1|301|annexin A1	CR602892|ANXA1|301|annexin A1	CR608352|ANXA1|301|annexin A1	CR622273|ANXA1|301|annexin A1	CR626421|ANXA1|301|annexin A1	AK296808|ANXA1|301|annexin A1	BC035993|ANXA1|301|annexin A1	NM_000700|ANXA1|301|annexin A1	X05908|ANXA1|301|annexin A1
hg18_v1_chr17_+_3065661_3065664	0.141988	LHX3,4.p2	BC069169|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC128248|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141934|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	BC141935|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1	NM_014565|OR1A1|8383|olfactory receptor, family 1, subfamily A, member 1
hg18_v1_chr4_-_72868598_72868805	0.141754	LHX3,4.p2	CR624576|GC|2638|group-specific component (vitamin D binding protein)	CR615579|GC|2638|group-specific component (vitamin D binding protein)	CR592599|GC|2638|group-specific component (vitamin D binding protein)	CR597042|GC|2638|group-specific component (vitamin D binding protein)	CR600650|GC|2638|group-specific component (vitamin D binding protein)	CR615455|GC|2638|group-specific component (vitamin D binding protein)	CR618111|GC|2638|group-specific component (vitamin D binding protein)	CR589987|GC|2638|group-specific component (vitamin D binding protein)	CR604515|GC|2638|group-specific component (vitamin D binding protein)	CR615226|GC|2638|group-specific component (vitamin D binding protein)	CR625283|GC|2638|group-specific component (vitamin D binding protein)	CR593132|GC|2638|group-specific component (vitamin D binding protein)	CR612125|GC|2638|group-specific component (vitamin D binding protein)	CR625359|GC|2638|group-specific component (vitamin D binding protein)	CR626806|GC|2638|group-specific component (vitamin D binding protein)	CR605798|GC|2638|group-specific component (vitamin D binding protein)	CR611556|GC|2638|group-specific component (vitamin D binding protein)	CR623633|GC|2638|group-specific component (vitamin D binding protein)	CR591786|GC|2638|group-specific component (vitamin D binding protein)	CR598387|GC|2638|group-specific component (vitamin D binding protein)	CR599900|GC|2638|group-specific component (vitamin D binding protein)	CR600738|GC|2638|group-specific component (vitamin D binding protein)	CR601461|GC|2638|group-specific component (vitamin D binding protein)	CR606955|GC|2638|group-specific component (vitamin D binding protein)	CR622285|GC|2638|group-specific component (vitamin D binding protein)	CR591437|GC|2638|group-specific component (vitamin D binding protein)	AK290827|GC|2638|group-specific component (vitamin D binding protein)	AK298433|GC|2638|group-specific component (vitamin D binding protein)	AK312971|GC|2638|group-specific component (vitamin D binding protein)	BC057228|GC|2638|group-specific component (vitamin D binding protein)	BC022310|GC|2638|group-specific component (vitamin D binding protein)	NM_000583|GC|2638|group-specific component (vitamin D binding protein)	X03178|GC|2638|group-specific component (vitamin D binding protein)	CR602970|GC|2638|group-specific component (vitamin D binding protein)	AK315853|GC|2638|group-specific component (vitamin D binding protein)
hg18_v1_chr8_-_111056099_111056185	0.141206	LHX3,4.p2	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1	AK313469|KCNV1|27012|potassium channel, subfamily V, member 1	AF167082|KCNV1|27012|potassium channel, subfamily V, member 1	NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1	AK297393|KCNV1|27012|potassium channel, subfamily V, member 1
hg18_v1_chr2_-_20390601_20390627	0.139917	LHX3,4.p2	D87078|PUM2|23369|pumilio homolog 2 (Drosophila)	AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)	NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)	BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)	BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)	BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)	BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr10_+_127575097_127575169	0.139493	LHX3,4.p2	NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1	BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1	CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1	AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1
hg18_v1_chr4_-_23500706_23500797	0.138437	LHX3,4.p2	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg18_v1_chr15_+_70477707_70477721	0.138244	LHX3,4.p2	AK131033|TMEM202|338949|transmembrane protein 202	NM_001080462|TMEM202|338949|transmembrane protein 202
hg18_v1_chr3_-_17716515_17716515	0.138009	LHX3,4.p2	AK310539|TBC1D5|9779|TBC1 domain family, member 5	NM_001134381|TBC1D5|9779|TBC1 domain family, member 5
hg18_v1_chr12_+_29267863_29268013	0.137834	LHX3,4.p2	BC022267|FAR2|55711|fatty acyl CoA reductase 2	NM_018099|FAR2|55711|fatty acyl CoA reductase 2	AK027756|FAR2|55711|fatty acyl CoA reductase 2	AK129857|FAR2|55711|fatty acyl CoA reductase 2	AK001927|FAR2|55711|fatty acyl CoA reductase 2
hg18_v1_chr9_-_34719463_34719534	0.137411	LHX3,4.p2	AK302320|C9orf144B|259308|transmembrane protein C9orf144B	NM_001141917|C9orf144B|259308|transmembrane protein C9orf144B
hg18_v1_chr18_-_50004770_50004930	0.1373	LHX3,4.p2	CR608921|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr8_-_30789846_30789863	0.136895	LHX3,4.p2	AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme
hg18_v1_chr1_-_89437098_89437220	0.135807	LHX3,4.p2	AK304245|GBP4|115361|guanylate binding protein 4	AF288814|GBP4|115361|guanylate binding protein 4	AK131094|GBP4|115361|guanylate binding protein 4	AL832576|GBP4|115361|guanylate binding protein 4	BC070055|GBP4|115361|guanylate binding protein 4	BC017889|GBP4|115361|guanylate binding protein 4	AK312417|GBP4|115361|guanylate binding protein 4	BC008421|GBP4|115361|guanylate binding protein 4	NM_052941|GBP4|115361|guanylate binding protein 4
hg18_v1_chr11_+_123600553_123600607	0.135561	LHX3,4.p2	BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2	NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2
hg18_v1_chr5_-_58918031_58918081	0.135056	LHX3,4.p2	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr6_+_29663661_29663700	0.134189	LHX3,4.p2	BC101683|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC112176|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	NM_007160|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	EU446925|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2	BC069146|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2
hg18_v1_chr4_+_78172966_78173092	0.133935	LHX3,4.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chr15_+_36014748_36014748	0.133639	LHX3,4.p2	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A	NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A
hg18_v1_chr13_-_109236897_109236922	0.133364	LHX3,4.p2	NM_003749|IRS2|8660|insulin receptor substrate 2	AF073310|IRS2|8660|insulin receptor substrate 2
hg18_v1_chr13_-_40491405_40491482	0.132952	LHX3,4.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr12_-_14982708_14982749	0.132201	LHX3,4.p2	BC030218|ERP27|121506|endoplasmic reticulum protein 27	AY358536|ERP27|121506|endoplasmic reticulum protein 27	NM_152321|ERP27|121506|endoplasmic reticulum protein 27	AK056677|ERP27|121506|endoplasmic reticulum protein 27
hg18_v1_chr11_-_123182266_123182304	0.131412	LHX3,4.p2	NM_001005325|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1	BC136929|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1	BC136931|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1
hg18_v1_chr18_+_30427279_30427326	0.130647	LHX3,4.p2	NM_001128175|DTNA|1837|dystrobrevin, alpha	NM_001198938|DTNA|1837|dystrobrevin, alpha	NM_001198939|DTNA|1837|dystrobrevin, alpha	NM_001198940|DTNA|1837|dystrobrevin, alpha	AK308410|DTNA|1837|dystrobrevin, alpha	AL833285|DTNA|1837|dystrobrevin, alpha	BC005300|DTNA|1837|dystrobrevin, alpha	AB209102|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr6_+_72983183_72983183	0.13053	LHX3,4.p2	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr4_+_109033868_109033878	0.130396	LHX3,4.p2	NM_001136257|SGMS2|166929|sphingomyelin synthase 2	NM_152621|SGMS2|166929|sphingomyelin synthase 2	BC028705|SGMS2|166929|sphingomyelin synthase 2	AK314049|SGMS2|166929|sphingomyelin synthase 2	BC041369|SGMS2|166929|sphingomyelin synthase 2
hg18_v1_chr4_-_47678187_47678306	0.130155	LHX3,4.p2	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1	NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1	S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1
hg18_v1_chrX_+_134803450_134803550	0.129895	LHX3,4.p2	AJ278111|SAGE1|55511|sarcoma antigen 1	NM_018666|SAGE1|55511|sarcoma antigen 1	AK310412|SAGE1|55511|sarcoma antigen 1	BC144260|SAGE1|55511|sarcoma antigen 1
hg18_v1_chr4_-_83566045_83566089	0.128663	LHX3,4.p2	
hg18_v1_chr11_-_74478405_74478446	0.128505	LHX3,4.p2	NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4	BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4	BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4
hg18_v1_chr13_-_102517196_102517196	0.12841	LHX3,4.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr11_-_47472648_47472648	0.127807	LHX3,4.p2	BC031079|CELF1|10658|CUGBP, Elav-like family member 1	NM_198700|CELF1|10658|CUGBP, Elav-like family member 1
hg18_v1_chr5_-_37220702_37220766	0.127074	LHX3,4.p2	AK055192|C5orf42|65250|chromosome 5 open reading frame 42
hg18_v1_chr10_+_90511142_90511142	0.126972	LHX3,4.p2	EF426483|LIPN|643418|lipase, family member N	NM_001102469|LIPN|643418|lipase, family member N
hg18_v1_chr9_+_102987137_102987157	0.126032	LHX3,4.p2	AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1
hg18_v1_chr7_+_28418668_28418668	0.125738	LHX3,4.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr1_-_163680941_163681215	0.125384	LHX3,4.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr2_-_213111525_213111596	0.125307	LHX3,4.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr8_+_104380234_104380316	0.124544	LHX3,4.p2	NM_001164616|FZD6|8323|frizzled homolog 6 (Drosophila)	NM_003506|FZD6|8323|frizzled homolog 6 (Drosophila)	AK299341|FZD6|8323|frizzled homolog 6 (Drosophila)	AK296824|FZD6|8323|frizzled homolog 6 (Drosophila)	BC060836|FZD6|8323|frizzled homolog 6 (Drosophila)	BC036106|FZD6|8323|frizzled homolog 6 (Drosophila)	AB012911|FZD6|8323|frizzled homolog 6 (Drosophila)	AK304092|FZD6|8323|frizzled homolog 6 (Drosophila)	AK316544|FZD6|8323|frizzled homolog 6 (Drosophila)	CR623773|FZD6|8323|frizzled homolog 6 (Drosophila)
hg18_v1_chr13_-_83354474_83354528	0.124132	LHX3,4.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr2_-_207291364_207291364	0.123807	LHX3,4.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr12_+_32578513_32578548	0.123302	LHX3,4.p2	AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4
hg18_v1_chr9_+_74956601_74956608	0.123005	LHX3,4.p2	CR592907|ANXA1|301|annexin A1	CR610492|ANXA1|301|annexin A1
hg18_v1_chr4_+_62045433_62045433	0.122485	LHX3,4.p2	NM_015236|LPHN3|23284|latrophilin 3
hg18_v1_chr10_+_35466715_35466769	0.12244	LHX3,4.p2	NM_183011|CREM|1390|cAMP responsive element modulator	NM_183012|CREM|1390|cAMP responsive element modulator
hg18_v1_chr9_+_123369219_123369219	0.122352	LHX3,4.p2	NM_032552|DAB2IP|153090|DAB2 interacting protein
hg18_v1_chr21_-_26175068_26175121	0.122241	LHX3,4.p2	S41243|APP|351|amyloid beta (A4) precursor protein
hg18_v1_chr8_-_30789865_30789922	0.121599	LHX3,4.p2	CR624064|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme	NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme
hg18_v1_chr10_+_123738678_123738767	0.12146	LHX3,4.p2	BC010219|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206861|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206862|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528098|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF528099|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144599|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC144600|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC150627|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC031036|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr11_-_57728228_57728228	0.121108	LHX3,4.p2	NM_001004459|OR1S2|219958|olfactory receptor, family 1, subfamily S, member 2
hg18_v1_chr4_+_41309482_41309560	0.12102	LHX3,4.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr3_+_35658852_35658852	0.120952	LHX3,4.p2	BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr6_-_64087806_64087840	0.120264	LHX3,4.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg18_v1_chr11_-_62753574_62753699	0.120106	LHX3,4.p2	AK127610|SLC22A25|387601|solute carrier family 22, member 25	BC101315|SLC22A25|387601|solute carrier family 22, member 25	BC101314|SLC22A25|387601|solute carrier family 22, member 25	AY437532|SLC22A25|387601|solute carrier family 22, member 25	BC101316|SLC22A25|387601|solute carrier family 22, member 25	BC101317|SLC22A25|387601|solute carrier family 22, member 25	NM_199352|SLC22A25|387601|solute carrier family 22, member 25
hg18_v1_chr3_+_133518966_133518990	0.119969	LHX3,4.p2	M24902|ACPP|55|acid phosphatase, prostate	X52174|ACPP|55|acid phosphatase, prostate	M34840|ACPP|55|acid phosphatase, prostate	DQ893148|ACPP|55|acid phosphatase, prostate	DQ896443|ACPP|55|acid phosphatase, prostate	AB102888|ACPP|55|acid phosphatase, prostate
hg18_v1_chr14_-_87863003_87863008	0.119874	LHX3,4.p2	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10	NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr1_-_143075560_143075602	0.119558	LHX3,4.p2	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A
hg18_v1_chr1_-_246912227_246912251	0.118941	LHX3,4.p2	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1	BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1	BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1
hg18_v1_chr11_+_48466844_48466920	0.118219	LHX3,4.p2	BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47
hg18_v1_chr7_+_141342147_141342175	0.118121	LHX3,4.p2	AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)	BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)
hg18_v1_chr4_-_138673014_138673070	0.116996	LHX3,4.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg18_v1_chr9_-_32516164_32516340	0.11669	LHX3,4.p2	AK301678|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK315040|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BX647917|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC070029|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC132786|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC136610|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AF038963|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	NM_014314|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC107731|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
hg18_v1_chr1_+_157067729_157067791	0.116458	LHX3,4.p2	BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen	BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen	AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen	AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen	M81750|MNDA|4332|myeloid cell nuclear differentiation antigen	NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen
hg18_v1_chr11_-_128399218_128399325	0.115837	LHX3,4.p2	AB018255|ARHGAP32|9743|Rho GTPase activating protein 32	AY194287|ARHGAP32|9743|Rho GTPase activating protein 32	AB079856|ARHGAP32|9743|Rho GTPase activating protein 32	NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr10_+_18589589_18589703	0.115643	LHX3,4.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr4_-_185963859_185963935	0.114872	LHX3,4.p2	AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1
hg18_v1_chr17_-_36192311_36192311	0.114492	LHX3,4.p2	AJ564206|KRT27|342574|keratin 27	NM_181537|KRT27|342574|keratin 27
hg18_v1_chr12_+_18305740_18305740	0.114173	LHX3,4.p2	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide
hg18_v1_chr10_-_50402148_50402364	0.11387	LHX3,4.p2	BC028954|PGBD3|267004|piggyBac transposable element derived 3	AK074682|PGBD3|267004|piggyBac transposable element derived 3	BC063690|PGBD3|267004|piggyBac transposable element derived 3	NM_170753|PGBD3|267004|piggyBac transposable element derived 3
hg18_v1_chr1_+_119759076_119759076	0.113545	LHX3,4.p2	NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
hg18_v1_chr19_-_58354091_58354133	0.113456	LHX3,4.p2	BC002938|ZNF347|84671|zinc finger protein 347	BC015611|ZNF347|84671|zinc finger protein 347	AY029765|ZNF347|84671|zinc finger protein 347	AK289994|ZNF347|84671|zinc finger protein 347	AK314603|ZNF347|84671|zinc finger protein 347	AK096623|ZNF347|84671|zinc finger protein 347	NM_001172674|ZNF347|84671|zinc finger protein 347	NM_001172675|ZNF347|84671|zinc finger protein 347	NM_032584|ZNF347|84671|zinc finger protein 347
hg18_v1_chr4_+_169250281_169250426	0.113066	LHX3,4.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chr20_-_39362122_39362152	0.113026	LHX3,4.p2	AK122905|ZHX3|23051|zinc fingers and homeoboxes 3	AK097523|ZHX3|23051|zinc fingers and homeoboxes 3	AB081948|ZHX3|23051|zinc fingers and homeoboxes 3	BC047070|ZHX3|23051|zinc fingers and homeoboxes 3	AK292415|ZHX3|23051|zinc fingers and homeoboxes 3	NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3
hg18_v1_chr14_+_101346032_101346092	0.111567	LHX3,4.p2	AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma
hg18_v1_chr4_+_91375204_91375204	0.111288	LHX3,4.p2	BC051694|FAM190A|401145|family with sequence similarity 190, member A	NM_207491|FAM190A|401145|family with sequence similarity 190, member A
hg18_v1_chr11_+_55617328_55617359	0.110781	LHX3,4.p2	BC137007|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	BC137008|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2	NM_001003750|OR8I2|120586|olfactory receptor, family 8, subfamily I, member 2
hg18_v1_chr8_-_125785611_125785615	0.110583	LHX3,4.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr19_-_63177713_63177713	0.110134	LHX3,4.p2	BC033933|C19orf18|147685|chromosome 19 open reading frame 18	NM_152474|C19orf18|147685|chromosome 19 open reading frame 18
hg18_v1_chr3_-_129777618_129777618	0.109782	LHX3,4.p2	AF008192|C3orf27|23434|chromosome 3 open reading frame 27	NM_007354|C3orf27|23434|chromosome 3 open reading frame 27
hg18_v1_chr2_-_278181_278307	0.109102	LHX3,4.p2	BC033490|FAM150B|285016|family with sequence similarity 150, member B	NM_001002919|FAM150B|285016|family with sequence similarity 150, member B
hg18_v1_chr1_-_233880676_233880676	0.108331	LHX3,4.p2	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4
hg18_v1_chr12_+_15590811_15590877	0.107686	LHX3,4.p2	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr11_-_58368555_58368574	0.107391	LHX3,4.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr11_+_59979857_59979921	0.1059	LHX3,4.p2	NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1	X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1
hg18_v1_chr1_-_115433570_115433709	0.105687	LHX3,4.p2	AF054839|TSPAN2|10100|tetraspanin 2	GU971730|TSPAN2|10100|tetraspanin 2	DQ893690|TSPAN2|10100|tetraspanin 2	DQ893691|TSPAN2|10100|tetraspanin 2	DQ893692|TSPAN2|10100|tetraspanin 2	DQ893693|TSPAN2|10100|tetraspanin 2	EU176787|TSPAN2|10100|tetraspanin 2	AK315385|TSPAN2|10100|tetraspanin 2	BC021675|TSPAN2|10100|tetraspanin 2	NM_005725|TSPAN2|10100|tetraspanin 2
hg18_v1_chr12_-_44877769_44877868	0.105465	LHX3,4.p2	CR595454|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr13_-_109600709_109600764	0.105329	LHX3,4.p2	M10941|COL4A1|1282|collagen, type IV, alpha 1	X03963|COL4A1|1282|collagen, type IV, alpha 1
hg18_v1_chr1_+_147819626_147819668	0.105071	LHX3,4.p2	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G
hg18_v1_chr3_+_133518900_133518956	0.104515	LHX3,4.p2	NM_001099|ACPP|55|acid phosphatase, prostate	NM_001134194|ACPP|55|acid phosphatase, prostate	AK300540|ACPP|55|acid phosphatase, prostate	BC007460|ACPP|55|acid phosphatase, prostate	BC016344|ACPP|55|acid phosphatase, prostate	BC008493|ACPP|55|acid phosphatase, prostate	BC017877|ACPP|55|acid phosphatase, prostate	X53605|ACPP|55|acid phosphatase, prostate
hg18_v1_chrX_-_21586337_21586368	0.104121	LHX3,4.p2	BC109031|KLHL34|257240|kelch-like 34 (Drosophila)	AK092279|KLHL34|257240|kelch-like 34 (Drosophila)	NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)
hg18_v1_chr21_-_35174742_35174870	0.103783	LHX3,4.p2	S76345|RUNX1|861|runt-related transcription factor 1	S76346|RUNX1|861|runt-related transcription factor 1
hg18_v1_chr3_-_187744808_187744860	0.103223	LHX3,4.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr21_-_31107431_31107440	0.103049	LHX3,4.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr9_-_4142182_4142182	0.102451	LHX3,4.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr7_-_26202626_26202771	0.101819	LHX3,4.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr12_+_53901075_53901075	0.101594	LHX3,4.p2	NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7
hg18_v1_chr12_+_54172413_54172413	0.101015	LHX3,4.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr18_-_44723116_44723174	0.100859	LHX3,4.p2	AK131394|SMAD7|4092|SMAD family member 7	NM_001190823|SMAD7|4092|SMAD family member 7
hg18_v1_chr4_+_71283383_71283448	0.100545	LHX3,4.p2	NM_006685|SMR3B|10879|submaxillary gland androgen regulated protein 3B	BC094707|SMR3B|10879|submaxillary gland androgen regulated protein 3B	D29833|SMR3B|10879|submaxillary gland androgen regulated protein 3B	BC015327|SMR3B|10879|submaxillary gland androgen regulated protein 3B
hg18_v1_chr3_-_106903734_106903755	0.100447	LHX3,4.p2	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg18_v1_chr12_-_21818881_21819021	0.100108	LHX3,4.p2	BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8	CR593376|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8
hg18_v1_chrX_-_19898302_19898302	0.0999432	LHX3,4.p2	NM_198279|CXorf23|256643|chromosome X open reading frame 23
hg18_v1_chr9_+_34642125_34642204	0.0996427	LHX3,4.p2	NM_001142784|IL11RA|3590|interleukin 11 receptor, alpha
hg18_v1_chr1_-_201177899_201177907	0.0994637	LHX3,4.p2	CR610443|ADIPOR1|51094|adiponectin receptor 1
hg18_v1_chr18_+_70352649_70352721	0.0990049	LHX3,4.p2	AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	CR610360|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr10_+_96943946_96943946	0.0987755	LHX3,4.p2	AK126134|C10orf129|142827|chromosome 10 open reading frame 129	NM_207321|C10orf129|142827|chromosome 10 open reading frame 129
hg18_v1_chr12_+_15017222_15017244	0.0984611	LHX3,4.p2	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma
hg18_v1_chr11_-_123758448_123758448	0.0983262	LHX3,4.p2	NM_001005468|OR8B2|26595|olfactory receptor, family 8, subfamily B, member 2
hg18_v1_chr9_+_74956614_74956633	0.0979884	LHX3,4.p2	CR618229|ANXA1|301|annexin A1	CR599722|ANXA1|301|annexin A1	BC001275|ANXA1|301|annexin A1	CR607819|ANXA1|301|annexin A1	CR608313|ANXA1|301|annexin A1
hg18_v1_chr12_+_61645361_61645445	0.0977175	LHX3,4.p2	CR596236|RPL14|9045|ribosomal protein L14
hg18_v1_chr4_+_70928718_70928764	0.0974559	LHX3,4.p2	NM_000200|HTN3|3347|histatin 3	BC009791|HTN3|3347|histatin 3	BC095438|HTN3|3347|histatin 3	M26665|HTN3|3347|histatin 3
hg18_v1_chr11_-_59390518_59390616	0.0971532	LHX3,4.p2	DQ892807|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	DQ896054|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	AK292990|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	BC018632|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	J05068|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	NM_001062|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)
hg18_v1_chrX_-_105169370_105169401	0.0964163	LHX3,4.p2	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
hg18_v1_chr5_-_147996769_147996816	0.0960849	LHX3,4.p2	AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg18_v1_chr3_-_191650291_191650358	0.0957999	LHX3,4.p2	BC071780|TMEM207|131920|transmembrane protein 207	AY358607|TMEM207|131920|transmembrane protein 207	NM_207316|TMEM207|131920|transmembrane protein 207
hg18_v1_chrX_+_144710557_144710755	0.0957784	LHX3,4.p2	NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2	NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2	BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2
hg18_v1_chr10_+_18729518_18729621	0.0954305	LHX3,4.p2	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr10_-_73953699_73953752	0.0954238	LHX3,4.p2	AK298347|CBARA1|10367|calcium binding atopy-related autoantigen 1	AK296086|CBARA1|10367|calcium binding atopy-related autoantigen 1	NM_001195519|CBARA1|10367|calcium binding atopy-related autoantigen 1
hg18_v1_chr3_+_46386636_46386636	0.0954076	LHX3,4.p2	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5	NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5
hg18_v1_chr10_-_98315090_98315173	0.0953085	LHX3,4.p2	AK000756|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chrX_-_77111790_77111794	0.095172	LHX3,4.p2	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4
hg18_v1_chr14_-_57133361_57133367	0.0950627	LHX3,4.p2	BC101318|SLC35F4|341880|solute carrier family 35, member F4	BC101319|SLC35F4|341880|solute carrier family 35, member F4	BC101320|SLC35F4|341880|solute carrier family 35, member F4	BC101321|SLC35F4|341880|solute carrier family 35, member F4	NM_001080455|SLC35F4|341880|solute carrier family 35, member F4
hg18_v1_chr21_+_30929425_30929453	0.0949424	LHX3,4.p2	AB096957|KRTAP20-2|337976|keratin associated protein 20-2	BC111084|KRTAP20-2|337976|keratin associated protein 20-2	NM_181616|KRTAP20-2|337976|keratin associated protein 20-2
hg18_v1_chr9_+_78283076_78283076	0.0948231	LHX3,4.p2	AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2
hg18_v1_chrX_-_138875342_138875342	0.0939749	LHX3,4.p2	BC137148|CXorf66|347487|chromosome X open reading frame 66	BC137149|CXorf66|347487|chromosome X open reading frame 66	NM_001013403|CXorf66|347487|chromosome X open reading frame 66
hg18_v1_chr2_-_134042500_134042517	0.093961	LHX3,4.p2	AK057980|NCKAP5|344148|NCK-associated protein 5	NM_207363|NCKAP5|344148|NCK-associated protein 5	NM_207481|NCKAP5|344148|NCK-associated protein 5
hg18_v1_chrX_+_107174855_107174976	0.0938314	LHX3,4.p2	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1	NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1	BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1	BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1	AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1
hg18_v1_chr5_+_140757787_140757878	0.0935902	LHX3,4.p2	BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5	BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5	AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5	NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5
hg18_v1_chr22_+_29696662_29696813	0.0935066	LHX3,4.p2	
hg18_v1_chr4_+_56509793_56509903	0.0933791	LHX3,4.p2	AK023683|CEP135|9662|centrosomal protein 135kDa	NM_025009|CEP135|9662|centrosomal protein 135kDa	BC136535|CEP135|9662|centrosomal protein 135kDa	BC136536|CEP135|9662|centrosomal protein 135kDa
hg18_v1_chr12_-_23993830_23993908	0.0932576	LHX3,4.p2	AK074317|SOX5|6660|SRY (sex determining region Y)-box 5	BC065532|SOX5|6660|SRY (sex determining region Y)-box 5	AB081589|SOX5|6660|SRY (sex determining region Y)-box 5	NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr12_+_108035424_108035467	0.0929154	LHX3,4.p2	
hg18_v1_chr11_+_56187713_56187737	0.0927421	LHX3,4.p2	BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1	NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1
hg18_v1_chr18_+_27281729_27281755	0.0927012	LHX3,4.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chrX_-_115508164_115508191	0.0923707	LHX3,4.p2	BC062223|CXorf61|203413|chromosome X open reading frame 61	NM_001017978|CXorf61|203413|chromosome X open reading frame 61	AK000618|CXorf61|203413|chromosome X open reading frame 61	AK026566|CXorf61|203413|chromosome X open reading frame 61
hg18_v1_chr6_-_76838944_76839114	0.0922908	LHX3,4.p2	BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1	CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1
hg18_v1_chr1_-_159191184_159191213	0.092251	LHX3,4.p2	AY065973|ITLN2|142683|intelectin 2	AY358905|ITLN2|142683|intelectin 2	NM_080878|ITLN2|142683|intelectin 2	BC117225|ITLN2|142683|intelectin 2	BC143339|ITLN2|142683|intelectin 2	BC143341|ITLN2|142683|intelectin 2
hg18_v1_chr11_-_57947358_57947361	0.0914544	LHX3,4.p2	BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2	BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2	NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2
hg18_v1_chr3_-_73756668_73756789	0.0911324	LHX3,4.p2	BC014432|PDZRN3|23024|PDZ domain containing ring finger 3	BC150623|PDZRN3|23024|PDZ domain containing ring finger 3	AB029018|PDZRN3|23024|PDZ domain containing ring finger 3	BC152417|PDZRN3|23024|PDZ domain containing ring finger 3	NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3
hg18_v1_chr1_-_146422000_146422042	0.0910032	LHX3,4.p2	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A	NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A
hg18_v1_chr7_-_126670804_126670804	0.0906159	LHX3,4.p2	NM_000845|GRM8|2918|glutamate receptor, metabotropic 8
hg18_v1_chr3_-_110155237_110155366	0.0905298	LHX3,4.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr11_-_85115105_85115158	0.0898163	LHX3,4.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr11_+_61794205_61794264	0.0898061	LHX3,4.p2	BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2	NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2	U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2	BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2	AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2
hg18_v1_chr18_+_59521173_59521173	0.0897576	LHX3,4.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg18_v1_chr12_+_10054492_10054625	0.0897265	LHX3,4.p2	AY358810|CLEC12B|387837|C-type lectin domain family 12, member B	AK128243|CLEC12B|387837|C-type lectin domain family 12, member B	NM_001129998|CLEC12B|387837|C-type lectin domain family 12, member B	NM_205852|CLEC12B|387837|C-type lectin domain family 12, member B	BC136805|CLEC12B|387837|C-type lectin domain family 12, member B	BC136806|CLEC12B|387837|C-type lectin domain family 12, member B	AK131027|CLEC12B|387837|C-type lectin domain family 12, member B	BC036036|CLEC12B|387837|C-type lectin domain family 12, member B	DQ368812|CLEC12B|387837|C-type lectin domain family 12, member B
hg18_v1_chr9_-_98580148_98580201	0.0895306	LHX3,4.p2	AB023189|ZNF510|22869|zinc finger protein 510	NM_014930|ZNF510|22869|zinc finger protein 510	BC036676|ZNF510|22869|zinc finger protein 510	BC068587|ZNF510|22869|zinc finger protein 510	BC058022|ZNF510|22869|zinc finger protein 510	AK292600|ZNF510|22869|zinc finger protein 510
hg18_v1_chr5_-_137502975_137503030	0.0894237	LHX3,4.p2	U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr6_-_73991895_73991895	0.089243	LHX3,4.p2	BC004267|KHDC1L|100129128|KH homology domain containing 1-like	NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like
hg18_v1_chr17_+_49255237_49255392	0.0892385	LHX3,4.p2	NM_032559|KIF2B|84643|kinesin family member 2B	AK057272|KIF2B|84643|kinesin family member 2B	AF333335|KIF2B|84643|kinesin family member 2B	BC033802|KIF2B|84643|kinesin family member 2B	AK302262|KIF2B|84643|kinesin family member 2B
hg18_v1_chr15_+_71522551_71522574	0.089221	LHX3,4.p2	NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60	AK131030|C15orf60|283677|chromosome 15 open reading frame 60	BC055412|C15orf60|283677|chromosome 15 open reading frame 60
hg18_v1_chr4_+_158361185_158361484	0.08919	LHX3,4.p2	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2	L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2
hg18_v1_chr14_-_93665678_93665709	0.0891135	LHX3,4.p2	NM_032036|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2
hg18_v1_chr14_+_75907442_75907442	0.0890553	LHX3,4.p2	NM_004452|ESRRB|2103|estrogen-related receptor beta
hg18_v1_chr10_+_115514567_115514567	0.0889896	LHX3,4.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chrX_+_140810117_140810117	0.0886365	LHX3,4.p2	NM_177456|MAGEC3|139081|melanoma antigen family C, 3
hg18_v1_chr3_+_171112053_171112175	0.0884727	LHX3,4.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chrX_+_48978875_48978909	0.08823	LHX3,4.p2	AK298264|CCDC22|28952|coiled-coil domain containing 22	CR610841|CCDC22|28952|coiled-coil domain containing 22	AK296911|CCDC22|28952|coiled-coil domain containing 22	AK291976|CCDC22|28952|coiled-coil domain containing 22
hg18_v1_chr13_-_69580459_69580625	0.0880424	LHX3,4.p2	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)	AB040923|KLHL1|57626|kelch-like 1 (Drosophila)	AK291435|KLHL1|57626|kelch-like 1 (Drosophila)	NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)
hg18_v1_chr11_+_22316242_22316242	0.0880041	LHX3,4.p2	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
hg18_v1_chr3_-_87408301_87408426	0.0876334	LHX3,4.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chrX_-_44945025_44945089	0.0871133	LHX3,4.p2	BC035375|CXorf36|79742|chromosome X open reading frame 36	AY358764|CXorf36|79742|chromosome X open reading frame 36	BC137528|CXorf36|79742|chromosome X open reading frame 36	BC137529|CXorf36|79742|chromosome X open reading frame 36	AK024165|CXorf36|79742|chromosome X open reading frame 36	NM_024689|CXorf36|79742|chromosome X open reading frame 36	NM_176819|CXorf36|79742|chromosome X open reading frame 36
hg18_v1_chr8_-_78075834_78075834	0.0867146	LHX3,4.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr2_+_169634330_169634422	0.0865571	LHX3,4.p2	AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr11_+_89624017_89624100	0.0855978	LHX3,4.p2	
hg18_v1_chr21_+_30895276_30895310	0.0855388	LHX3,4.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr8_-_17599438_17599525	0.0852381	LHX3,4.p2	AF293357|MTUS1|57509|microtubule associated tumor suppressor 1	BC017740|MTUS1|57509|microtubule associated tumor suppressor 1	AK314692|MTUS1|57509|microtubule associated tumor suppressor 1	BC098381|MTUS1|57509|microtubule associated tumor suppressor 1	BC142971|MTUS1|57509|microtubule associated tumor suppressor 1	AK289750|MTUS1|57509|microtubule associated tumor suppressor 1	NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr8_-_122722674_122722941	0.084955	LHX3,4.p2	BC109071|HAS2|3037|hyaluronan synthase 2	BC109072|HAS2|3037|hyaluronan synthase 2	NM_005328|HAS2|3037|hyaluronan synthase 2	U54804|HAS2|3037|hyaluronan synthase 2	AK297724|HAS2|3037|hyaluronan synthase 2
hg18_v1_chr3_-_147805715_147805799	0.0848431	LHX3,4.p2	BC157886|PLSCR5|389158|phospholipid scramblase family, member 5	BC171917|PLSCR5|389158|phospholipid scramblase family, member 5	CR591144|PLSCR5|389158|phospholipid scramblase family, member 5
hg18_v1_chr6_-_50097606_50097652	0.0843747	LHX3,4.p2	DQ012014|DEFB110|245913|defensin, beta 110 locus	DQ012015|DEFB110|245913|defensin, beta 110 locus	NM_001037497|DEFB110|245913|defensin, beta 110 locus	NM_001037728|DEFB110|245913|defensin, beta 110 locus
hg18_v1_chr4_+_102954005_102954058	0.0843052	LHX3,4.p2	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1
hg18_v1_chr21_-_30631882_30631882	0.0838128	LHX3,4.p2	AB096937|KRTAP27-1|643812|keratin associated protein 27-1	NM_001077711|KRTAP27-1|643812|keratin associated protein 27-1
hg18_v1_chr10_+_17310263_17310263	0.0835087	LHX3,4.p2	NM_003380|VIM|7431|vimentin
hg18_v1_chr4_+_72423633_72423829	0.0835001	LHX3,4.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr6_+_64289585_64289643	0.0834727	LHX3,4.p2	CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr2_+_5750229_5750303	0.0834375	LHX3,4.p2	U23752|SOX11|6664|SRY (sex determining region Y)-box 11	AB028641|SOX11|6664|SRY (sex determining region Y)-box 11	NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11	BC025789|SOX11|6664|SRY (sex determining region Y)-box 11
hg18_v1_chr13_-_95092283_95092405	0.0834178	LHX3,4.p2	AF272347|DZIP1|22873|DAZ interacting protein 1	AF272348|DZIP1|22873|DAZ interacting protein 1
hg18_v1_chr15_-_53587723_53587723	0.0829059	LHX3,4.p2	AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1	NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1	NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1	NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1
hg18_v1_chr3_+_11269384_11269384	0.0827889	LHX3,4.p2	BC060802|HRH1|3269|histamine receptor H1	NM_000861|HRH1|3269|histamine receptor H1
hg18_v1_chr1_-_114215768_114215897	0.0826372	LHX3,4.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr1_-_198856479_198856526	0.0821756	LHX3,4.p2	D26361|KIF14|9928|kinesin family member 14	NM_014875|KIF14|9928|kinesin family member 14
hg18_v1_chr1_+_151240846_151240870	0.08212	LHX3,4.p2	NM_001097589|SPRR3|6707|small proline-rich protein 3	NM_005416|SPRR3|6707|small proline-rich protein 3	AK311823|SPRR3|6707|small proline-rich protein 3	BC017802|SPRR3|6707|small proline-rich protein 3	EF553525|SPRR3|6707|small proline-rich protein 3	AJ243667|SPRR3|6707|small proline-rich protein 3	AY118269|SPRR3|6707|small proline-rich protein 3
hg18_v1_chr9_+_35032222_35032262	0.08194	LHX3,4.p2	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131	NM_203299|C9orf131|138724|chromosome 9 open reading frame 131	BC045643|C9orf131|138724|chromosome 9 open reading frame 131	AK097595|C9orf131|138724|chromosome 9 open reading frame 131	AK302123|C9orf131|138724|chromosome 9 open reading frame 131
hg18_v1_chr17_+_3324096_3324153	0.081451	LHX3,4.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg18_v1_chr14_-_105623358_105623855	0.0798489	LHX3,4.p2	BC021276|IGHD|3495|immunoglobulin heavy constant delta	BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK128625|IGHD|3495|immunoglobulin heavy constant delta	AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr8_+_104900591_104900911	0.0796644	LHX3,4.p2	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2	AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2	AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2	BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2
hg18_v1_chr3_+_149930656_149930656	0.079566	LHX3,4.p2	NM_032049|AGTR1|185|angiotensin II receptor, type 1
hg18_v1_chrX_+_78313124_78313124	0.0795639	LHX3,4.p2	AF345567|GPR174|84636|G protein-coupled receptor 174	BC104922|GPR174|84636|G protein-coupled receptor 174	BC104924|GPR174|84636|G protein-coupled receptor 174	NM_032553|GPR174|84636|G protein-coupled receptor 174
hg18_v1_chr15_+_22832198_22832286	0.0789134	LHX3,4.p2	AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr9_-_14858974_14859024	0.0783569	LHX3,4.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr11_-_128567302_128567302	0.0779252	LHX3,4.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr2_-_241860917_241860918	0.0776531	LHX3,4.p2	AK300312|HDLBP|3069|high density lipoprotein binding protein
hg18_v1_chr12_-_10497195_10497245	0.0770637	LHX3,4.p2	X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1
hg18_v1_chr4_+_22303645_22303736	0.0767454	LHX3,4.p2	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)
hg18_v1_chr6_+_72653126_72653172	0.0758421	LHX3,4.p2	AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1	AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr11_+_89032112_89032112	0.0756517	LHX3,4.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg18_v1_chr8_-_27157157_27157233	0.0749138	LHX3,4.p2	DQ891040|STMN4|81551|stathmin-like 4	DQ894219|STMN4|81551|stathmin-like 4	AJ303455|STMN4|81551|stathmin-like 4
hg18_v1_chr12_-_50026689_50026729	0.0748365	LHX3,4.p2	BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1	AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1	BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1	NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1
hg18_v1_chr10_-_21825879_21826077	0.0745637	LHX3,4.p2	BC130594|C10orf114|399726|chromosome 10 open reading frame 114	BC132974|C10orf114|399726|chromosome 10 open reading frame 114	CR596294|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr13_+_109952014_109952090	0.0743051	LHX3,4.p2	X05610|COL4A2|1284|collagen, type IV, alpha 2
hg18_v1_chr1_+_42934910_42935048	0.0742584	LHX3,4.p2	CR606600|YBX1|4904|Y box binding protein 1	CR611343|YBX1|4904|Y box binding protein 1	BC020164|YBX1|4904|Y box binding protein 1	CR626550|YBX1|4904|Y box binding protein 1
hg18_v1_chr21_-_31332665_31332665	0.073937	LHX3,4.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr4_-_100431093_100431207	0.0738346	LHX3,4.p2	BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg18_v1_chr11_+_48194937_48194937	0.0737764	LHX3,4.p2	NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1
hg18_v1_chr1_+_42773146_42773146	0.0733618	LHX3,4.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr3_-_15538164_15538280	0.0729796	LHX3,4.p2	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg18_v1_chr12_-_15706340_15706474	0.0724954	LHX3,4.p2	AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8
hg18_v1_chr21_-_30786145_30786189	0.0724028	LHX3,4.p2	AF139541|KRTAP19-3|337970|keratin associated protein 19-3	NM_181609|KRTAP19-3|337970|keratin associated protein 19-3	AB096944|KRTAP19-3|337970|keratin associated protein 19-3	BC126280|KRTAP19-3|337970|keratin associated protein 19-3	BC126282|KRTAP19-3|337970|keratin associated protein 19-3
hg18_v1_chrX_+_114734074_114734175	0.0721718	LHX3,4.p2	NM_001136025|PLS3|5358|plastin 3	NM_001172335|PLS3|5358|plastin 3	AK298530|PLS3|5358|plastin 3	AK300575|PLS3|5358|plastin 3	BC039049|PLS3|5358|plastin 3
hg18_v1_chr11_+_59580630_59580695	0.0721599	LHX3,4.p2	NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg18_v1_chr11_-_5302157_5302157	0.0721278	LHX3,4.p2	BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2	NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2
hg18_v1_chr4_+_111616630_111617015	0.0713109	LHX3,4.p2	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)	AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)
hg18_v1_chr2_-_165768798_165768849	0.0709352	LHX3,4.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg18_v1_chr3_+_50248652_50248677	0.0708327	LHX3,4.p2	BC014627|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	X04828|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	CR606737|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	CR603761|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	CR604433|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr19_+_46121963_46122017	0.0704447	LHX3,4.p2	AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1
hg18_v1_chr10_-_69125932_69125954	0.0704084	LHX3,4.p2	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3
hg18_v1_chr3_+_133801670_133801670	0.0703737	LHX3,4.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg18_v1_chrX_-_24575375_24575386	0.0701327	LHX3,4.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr13_-_40491491_40491507	0.0699146	LHX3,4.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr13_-_22905822_22905859	0.0696334	LHX3,4.p2	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg18_v1_chr3_-_62334229_62334229	0.0692608	LHX3,4.p2	AK290464|FEZF2|55079|FEZ family zinc finger 2	NM_018008|FEZF2|55079|FEZ family zinc finger 2
hg18_v1_chr11_-_59707074_59707271	0.0690495	LHX3,4.p2	AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	CR609705|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	CR625448|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A	AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A
hg18_v1_chr15_+_55298908_55299010	0.0690447	LHX3,4.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr3_+_159310543_159310627	0.0689982	LHX3,4.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr3_+_99733432_99733567	0.0686299	LHX3,4.p2	AK313375|GPR15|2838|G protein-coupled receptor 15	BC101779|GPR15|2838|G protein-coupled receptor 15	BC101781|GPR15|2838|G protein-coupled receptor 15	BC069437|GPR15|2838|G protein-coupled receptor 15	NM_005290|GPR15|2838|G protein-coupled receptor 15
hg18_v1_chr8_-_52884456_52884557	0.0684848	LHX3,4.p2	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like	AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like	NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like
hg18_v1_chr8_-_101384633_101384662	0.0683911	LHX3,4.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr20_-_33580861_33580894	0.0682339	LHX3,4.p2	AK058089|C20orf173|140873|chromosome 20 open reading frame 173	AK310337|C20orf173|140873|chromosome 20 open reading frame 173	NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173
hg18_v1_chr20_-_19981005_19981123	0.0681469	LHX3,4.p2	AK292799|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318302|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AB016840|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF111802|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AL832435|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg18_v1_chr10_+_83627422_83627422	0.0678032	LHX3,4.p2	DQ857894|NRG3|10718|neuregulin 3	NM_001165973|NRG3|10718|neuregulin 3
hg18_v1_chrX_+_78087484_78087573	0.0675878	LHX3,4.p2	NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10
hg18_v1_chrX_-_27909486_27909486	0.0673306	LHX3,4.p2	AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1
hg18_v1_chr8_+_92184022_92184048	0.0672394	LHX3,4.p2	AK097393|LRRC69|100130742|leucine rich repeat containing 69	NM_001129890|LRRC69|100130742|leucine rich repeat containing 69	AK130865|LRRC69|100130742|leucine rich repeat containing 69
hg18_v1_chr4_+_70896236_70896290	0.0670569	LHX3,4.p2	NM_001009181|STATH|6779|statherin	NM_003154|STATH|6779|statherin	AK311812|STATH|6779|statherin	BC067219|STATH|6779|statherin	M18078|STATH|6779|statherin	M18371|STATH|6779|statherin
hg18_v1_chrX_-_21686079_21686198	0.0669175	LHX3,4.p2	BC005948|SMPX|23676|small muscle protein, X-linked	AF129505|SMPX|23676|small muscle protein, X-linked	AJ250584|SMPX|23676|small muscle protein, X-linked	NM_014332|SMPX|23676|small muscle protein, X-linked	AK312134|SMPX|23676|small muscle protein, X-linked
hg18_v1_chr3_+_161425946_161426116	0.066859	LHX3,4.p2	NM_001168214|LOC401097|401097|hypothetical protein LOC401097
hg18_v1_chr16_-_28542366_28542446	0.066856	LHX3,4.p2	NM_177536|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1	CR608214|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1	CR601418|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg18_v1_chr5_-_52441044_52441088	0.066387	LHX3,4.p2	BC046097|MOCS2|4338|molybdenum cofactor synthesis 2	AF155659|MOCS2|4338|molybdenum cofactor synthesis 2	NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2	CR615842|MOCS2|4338|molybdenum cofactor synthesis 2
hg18_v1_chr12_-_86947276_86947306	0.0662048	LHX3,4.p2	AL833338|C12orf50|160419|chromosome 12 open reading frame 50	BC062424|C12orf50|160419|chromosome 12 open reading frame 50	AK093140|C12orf50|160419|chromosome 12 open reading frame 50	NM_152589|C12orf50|160419|chromosome 12 open reading frame 50
hg18_v1_chr6_+_43097352_43097379	0.0661451	LHX3,4.p2	AK313816|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC006293|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	BC011933|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)	NM_033112|RRP36|88745|ribosomal RNA processing 36 homolog (S. cerevisiae)
hg18_v1_chr10_-_75005421_75005438	0.0659825	LHX3,4.p2	AJ583820|USP54|159195|ubiquitin specific peptidase 54	NM_152586|USP54|159195|ubiquitin specific peptidase 54
hg18_v1_chr1_+_200775864_200775943	0.0658124	LHX3,4.p2	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B	NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory (inhibitor) subunit 12B
hg18_v1_chr10_+_68355797_68355845	0.0657719	LHX3,4.p2	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3	BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3
hg18_v1_chr15_+_79276273_79276274	0.0654796	LHX3,4.p2	AK124725|IL16|3603|interleukin 16 (lymphocyte chemoattractant factor)	NM_001172128|IL16|3603|interleukin 16 (lymphocyte chemoattractant factor)	AK124565|IL16|3603|interleukin 16 (lymphocyte chemoattractant factor)	AK131530|IL16|3603|interleukin 16 (lymphocyte chemoattractant factor)
hg18_v1_chr3_-_115960807_115960813	0.0654652	LHX3,4.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chrX_+_23982992_23983006	0.0653483	LHX3,4.p2	AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg18_v1_chr6_-_122807439_122807640	0.0652793	LHX3,4.p2	CR603380|SERINC1|57515|serine incorporator 1	CR592244|SERINC1|57515|serine incorporator 1
hg18_v1_chr21_+_42697058_42697123	0.0651481	LHX3,4.p2	AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A	AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A
hg18_v1_chr1_+_150948146_150948146	0.064996	LHX3,4.p2	BC113446|LCE4A|199834|late cornified envelope 4A	BC113448|LCE4A|199834|late cornified envelope 4A	NM_178356|LCE4A|199834|late cornified envelope 4A
hg18_v1_chr5_-_1935764_1935879	0.0649298	LHX3,4.p2	BC110912|IRX4|50805|iroquois homeobox 4	BC144204|IRX4|50805|iroquois homeobox 4	BC136505|IRX4|50805|iroquois homeobox 4	BC136506|IRX4|50805|iroquois homeobox 4	AF124733|IRX4|50805|iroquois homeobox 4	NM_016358|IRX4|50805|iroquois homeobox 4
hg18_v1_chr10_-_108448990_108449109	0.0642118	LHX3,4.p2	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg18_v1_chr10_-_101831579_101831647	0.0640793	LHX3,4.p2	CR603435|CPN1|1369|carboxypeptidase N, polypeptide 1	X14329|CPN1|1369|carboxypeptidase N, polypeptide 1	CR597710|CPN1|1369|carboxypeptidase N, polypeptide 1	BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1	CR608830|CPN1|1369|carboxypeptidase N, polypeptide 1	NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1	AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1
hg18_v1_chr9_-_21472311_21472311	0.0639901	LHX3,4.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr10_+_104253716_104253903	0.0635319	LHX3,4.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr4_-_83566246_83566273	0.0634934	LHX3,4.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr6_+_151603264_151603284	0.0634554	LHX3,4.p2	
hg18_v1_chr11_-_35235325_35235478	0.0632102	LHX3,4.p2	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg18_v1_chr14_-_44046202_44046248	0.0632008	LHX3,4.p2	AK302615|FSCB|84075|fibrous sheath CABYR binding protein	CR933626|FSCB|84075|fibrous sheath CABYR binding protein	BC039878|FSCB|84075|fibrous sheath CABYR binding protein	CR933608|FSCB|84075|fibrous sheath CABYR binding protein	AK124110|FSCB|84075|fibrous sheath CABYR binding protein	NM_032135|FSCB|84075|fibrous sheath CABYR binding protein
hg18_v1_chr14_-_77152862_77152897	0.0631555	LHX3,4.p2	AB011098|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2	NM_004863|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2
hg18_v1_chr3_+_158637273_158637416	0.0630494	LHX3,4.p2	AK312705|PTX3|5806|pentraxin 3, long	NM_002852|PTX3|5806|pentraxin 3, long	BC039733|PTX3|5806|pentraxin 3, long	CR606073|PTX3|5806|pentraxin 3, long	M31166|PTX3|5806|pentraxin 3, long	X63613|PTX3|5806|pentraxin 3, long	BC027887|PTX3|5806|pentraxin 3, long	CR593354|PTX3|5806|pentraxin 3, long	CR612979|PTX3|5806|pentraxin 3, long	CR605317|PTX3|5806|pentraxin 3, long	CR612981|PTX3|5806|pentraxin 3, long	X63053|PTX3|5806|pentraxin 3, long
hg18_v1_chr14_-_70071484_70071484	0.0629684	LHX3,4.p2	BC025378|ADAM20|8748|ADAM metallopeptidase domain 20	NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20
hg18_v1_chr8_+_42671718_42671846	0.0628024	LHX3,4.p2	BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3	U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3
hg18_v1_chr4_-_113656762_113656786	0.0623277	LHX3,4.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chrX_-_106129854_106130026	0.0620739	LHX3,4.p2	EF125209|MORC4|79710|MORC family CW-type zinc finger 4
hg18_v1_chr10_-_22332368_22332543	0.0617547	LHX3,4.p2	AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg18_v1_chr22_-_37211467_37211487	0.0617489	LHX3,4.p2	CR620697|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	BC045747|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
hg18_v1_chr18_-_50004932_50004995	0.0617286	LHX3,4.p2	CR615628|MBD2|8932|methyl-CpG binding domain protein 2	CR603954|MBD2|8932|methyl-CpG binding domain protein 2	CR615715|MBD2|8932|methyl-CpG binding domain protein 2	BC032638|MBD2|8932|methyl-CpG binding domain protein 2	CR592850|MBD2|8932|methyl-CpG binding domain protein 2	CR592999|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr14_-_93665668_93665675	0.0616099	LHX3,4.p2	BC032626|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2	AF208232|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2
hg18_v1_chrX_+_36163971_36163971	0.0615341	LHX3,4.p2	NM_001098843|CXorf30|645090|chromosome X open reading frame 30
hg18_v1_chr9_+_104797413_104797483	0.0613132	LHX3,4.p2	BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2
hg18_v1_chr5_+_59819761_59819834	0.0612754	LHX3,4.p2	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)
hg18_v1_chrX_+_28515479_28515601	0.0611344	LHX3,4.p2	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1	NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1
hg18_v1_chr3_-_109730858_109730858	0.0610226	LHX3,4.p2	AB023217|MYH15|22989|myosin, heavy chain 15	NM_014981|MYH15|22989|myosin, heavy chain 15
hg18_v1_chr21_-_30460841_30460914	0.060948	LHX3,4.p2	BC101503|CLDN17|26285|claudin 17	BC101505|CLDN17|26285|claudin 17	NM_012131|CLDN17|26285|claudin 17	AY358094|CLDN17|26285|claudin 17
hg18_v1_chr5_-_156525756_156525856	0.0607228	LHX3,4.p2	AY973323|FAM71B|153745|family with sequence similarity 71, member B	AF465821|FAM71B|153745|family with sequence similarity 71, member B	BC025397|FAM71B|153745|family with sequence similarity 71, member B	AK057543|FAM71B|153745|family with sequence similarity 71, member B	BC022035|FAM71B|153745|family with sequence similarity 71, member B	BC025409|FAM71B|153745|family with sequence similarity 71, member B	BC025998|FAM71B|153745|family with sequence similarity 71, member B	NM_130899|FAM71B|153745|family with sequence similarity 71, member B
hg18_v1_chr16_+_24475129_24475130	0.0604872	LHX3,4.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr12_+_20739555_20739982	0.0602861	LHX3,4.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	CR594946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg18_v1_chr6_-_136829705_136829705	0.0600409	LHX3,4.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr1_-_157551072_157551072	0.0595631	LHX3,4.p2	NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3
hg18_v1_chr15_+_22619886_22619886	0.0592282	LHX3,4.p2	L80005|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_022806|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_022807|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_022808|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr4_-_122357104_122357231	0.05922	LHX3,4.p2	NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3	AK301058|TNIP3|79931|TNFAIP3 interacting protein 3
hg18_v1_chr5_-_88235624_88235677	0.0589752	LHX3,4.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr7_-_139408808_139409352	0.058833	LHX3,4.p2	AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12	BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12
hg18_v1_chr11_-_7906784_7906784	0.0587842	LHX3,4.p2	NM_001004461|OR10A6|390093|olfactory receptor, family 10, subfamily A, member 6
hg18_v1_chr14_+_102921528_102921750	0.0582774	LHX3,4.p2	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg18_v1_chr5_+_140160966_140160966	0.0582182	LHX3,4.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr5_+_76470829_76470856	0.0579024	LHX3,4.p2	
hg18_v1_chr5_-_41249270_41249423	0.0578151	LHX3,4.p2	J05024|C6|729|complement component 6	J04506|C6|729|complement component 6	AK292509|C6|729|complement component 6	J05064|C6|729|complement component 6	AK313673|C6|729|complement component 6	NM_000065|C6|729|complement component 6
hg18_v1_chr17_+_31195760_31196041	0.0576899	LHX3,4.p2	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg18_v1_chr10_-_116241572_116241622	0.0574609	LHX3,4.p2	
hg18_v1_chr4_+_70831387_70831408	0.0574029	LHX3,4.p2	NM_001025104|CSN1S1|1446|casein alpha s1	NM_001890|CSN1S1|1446|casein alpha s1	X78416|CSN1S1|1446|casein alpha s1	BC128227|CSN1S1|1446|casein alpha s1	BC128228|CSN1S1|1446|casein alpha s1	U23157|CSN1S1|1446|casein alpha s1
hg18_v1_chr15_-_54175954_54176025	0.0572516	LHX3,4.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr17_+_63338500_63338579	0.0571968	LHX3,4.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr5_-_59819642_59819681	0.0568917	LHX3,4.p2	AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr1_+_182040837_182040991	0.0567944	LHX3,4.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr7_+_143457083_143457138	0.0567481	LHX3,4.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr12_-_47031287_47031295	0.0567301	LHX3,4.p2	AK298064|ZNF641|121274|zinc finger protein 641	NM_001172682|ZNF641|121274|zinc finger protein 641
hg18_v1_chr4_-_145159889_145159945	0.0565676	LHX3,4.p2	AY509882|GYPB|2994|glycophorin B (MNS blood group)	AY950609|GYPB|2994|glycophorin B (MNS blood group)	AY950610|GYPB|2994|glycophorin B (MNS blood group)	AY950611|GYPB|2994|glycophorin B (MNS blood group)	U05255|GYPB|2994|glycophorin B (MNS blood group)	J02982|GYPB|2994|glycophorin B (MNS blood group)	BC121077|GYPB|2994|glycophorin B (MNS blood group)	BC121078|GYPB|2994|glycophorin B (MNS blood group)	EU338223|GYPB|2994|glycophorin B (MNS blood group)	EU338224|GYPB|2994|glycophorin B (MNS blood group)	EU338225|GYPB|2994|glycophorin B (MNS blood group)	EU338226|GYPB|2994|glycophorin B (MNS blood group)	EU338227|GYPB|2994|glycophorin B (MNS blood group)	EU338228|GYPB|2994|glycophorin B (MNS blood group)	EU338229|GYPB|2994|glycophorin B (MNS blood group)	EU338230|GYPB|2994|glycophorin B (MNS blood group)	EU338235|GYPB|2994|glycophorin B (MNS blood group)	EU338236|GYPB|2994|glycophorin B (MNS blood group)	EU338237|GYPB|2994|glycophorin B (MNS blood group)	EU338238|GYPB|2994|glycophorin B (MNS blood group)	BC069310|GYPB|2994|glycophorin B (MNS blood group)	X08055|GYPB|2994|glycophorin B (MNS blood group)	NM_002100|GYPB|2994|glycophorin B (MNS blood group)
hg18_v1_chr17_+_54997667_54997871	0.0565486	LHX3,4.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr8_-_91065961_91066055	0.0564973	LHX3,4.p2	BC143065|NBN|4683|nibrin	BC143066|NBN|4683|nibrin	BC108650|NBN|4683|nibrin	BC016762|NBN|4683|nibrin	BC005293|NBN|4683|nibrin	AF058696|NBN|4683|nibrin	AF051334|NBN|4683|nibrin	AK223256|NBN|4683|nibrin	BC146797|NBN|4683|nibrin	BC136802|NBN|4683|nibrin	BC136803|NBN|4683|nibrin	BC144413|NBN|4683|nibrin
hg18_v1_chr1_+_103961476_103961585	0.056396	LHX3,4.p2	BC146997|AMY2A|279|amylase, alpha 2A (pancreatic)	BC007060|AMY2A|279|amylase, alpha 2A (pancreatic)	NM_000699|AMY2A|279|amylase, alpha 2A (pancreatic)	AK223463|AMY2A|279|amylase, alpha 2A (pancreatic)	M28443|AMY2A|279|amylase, alpha 2A (pancreatic)	DQ892901|AMY2A|279|amylase, alpha 2A (pancreatic)	DQ896151|AMY2A|279|amylase, alpha 2A (pancreatic)
hg18_v1_chr11_+_55899675_55899675	0.0559091	LHX3,4.p2	NM_001005204|OR8U1|219417|olfactory receptor, family 8, subfamily U, member 1	NM_001013356|OR8U8|504189|olfactory receptor, family 8, subfamily U, member 8
hg18_v1_chr12_-_51476047_51476167	0.0557352	LHX3,4.p2	AJ628418|KRT3|3850|keratin 3	NM_057088|KRT3|3850|keratin 3	AK314987|KRT3|3850|keratin 3
hg18_v1_chr18_+_59405513_59405642	0.0556121	LHX3,4.p2	NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13
hg18_v1_chr11_-_104344473_104344541	0.0555694	LHX3,4.p2	CR595643|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	CR601555|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	CR622245|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	CR613155|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase
hg18_v1_chrX_-_72351348_72351358	0.0554373	LHX3,4.p2	BC026325|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr15_+_56217686_56217871	0.0553579	LHX3,4.p2	AK300055|AQP9|366|aquaporin 9	NM_020980|AQP9|366|aquaporin 9	AK313214|AQP9|366|aquaporin 9	AF016495|AQP9|366|aquaporin 9	AB008775|AQP9|366|aquaporin 9	BC026258|AQP9|366|aquaporin 9
hg18_v1_chr1_+_28637247_28637268	0.0548225	LHX3,4.p2	NM_023923|PHACTR4|65979|phosphatase and actin regulator 4	BC021247|PHACTR4|65979|phosphatase and actin regulator 4
hg18_v1_chrX_-_72351392_72351434	0.0548062	LHX3,4.p2	AK291297|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK303676|NAP1L2|4674|nucleosome assembly protein 1-like 2	AB027013|NAP1L2|4674|nucleosome assembly protein 1-like 2	NM_021963|NAP1L2|4674|nucleosome assembly protein 1-like 2	AK316569|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr5_+_140751666_140751666	0.0545982	LHX3,4.p2	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8	NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8
hg18_v1_chr13_-_102209422_102209422	0.054552	LHX3,4.p2	NM_001146197|C13orf40|643677|chromosome 13 open reading frame 40
hg18_v1_chrX_-_68301974_68302089	0.0545479	LHX3,4.p2	AK290543|PJA1|64219|praja ring finger 1	AK226171|PJA1|64219|praja ring finger 1	BC075803|PJA1|64219|praja ring finger 1	AF264620|PJA1|64219|praja ring finger 1	AK293266|PJA1|64219|praja ring finger 1	AK294632|PJA1|64219|praja ring finger 1	CR616039|PJA1|64219|praja ring finger 1	AK096611|PJA1|64219|praja ring finger 1	NM_001032396|PJA1|64219|praja ring finger 1	NM_022368|PJA1|64219|praja ring finger 1	NM_145119|PJA1|64219|praja ring finger 1
hg18_v1_chrX_+_37524190_37524238	0.0544167	LHX3,4.p2	NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide	AK289753|CYBB|1536|cytochrome b-245, beta polypeptide	BC032720|CYBB|1536|cytochrome b-245, beta polypeptide
hg18_v1_chr10_-_22332600_22332640	0.0543846	LHX3,4.p2	CR613772|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg18_v1_chr9_+_6205804_6205808	0.0542221	LHX3,4.p2	AK295908|IL33|90865|interleukin 33	AK313414|IL33|90865|interleukin 33	AK303943|IL33|90865|interleukin 33	BC047085|IL33|90865|interleukin 33
hg18_v1_chr1_+_173111306_173111306	0.0541992	LHX3,4.p2	BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like
hg18_v1_chr18_+_59705918_59705969	0.0541505	LHX3,4.p2	AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	CR594634|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	CR599277|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	CR604199|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	CR616092|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	CR626822|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2
hg18_v1_chr12_-_55042793_55042873	0.0539437	LHX3,4.p2	L27050|APOF|319|apolipoprotein F	AK314892|APOF|319|apolipoprotein F	BC026257|APOF|319|apolipoprotein F	NM_001638|APOF|319|apolipoprotein F	CR936663|APOF|319|apolipoprotein F
hg18_v1_chr16_-_11918019_11918019	0.0539183	LHX3,4.p2	NM_001130007|GSPT1|2935|G1 to S phase transition 1
hg18_v1_chr17_-_36074812_36074941	0.0536672	LHX3,4.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg18_v1_chr21_-_14501114_14501124	0.0536479	LHX3,4.p2	AY197607|LIPI|149998|lipase, member I	NM_198996|LIPI|149998|lipase, member I
hg18_v1_chr14_+_102921446_102921466	0.0535106	LHX3,4.p2	NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3	NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg18_v1_chr9_-_14388981_14388981	0.0533865	LHX3,4.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr20_+_56369012_56369018	0.0533781	LHX3,4.p2	
hg18_v1_chr18_+_70352779_70352843	0.0532921	LHX3,4.p2	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)	BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg18_v1_chr6_+_72982865_72982865	0.0532442	LHX3,4.p2	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr17_-_61655915_61656017	0.0530188	LHX3,4.p2	CR595640|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	CR591542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)
hg18_v1_chr9_-_19778590_19778608	0.0527733	LHX3,4.p2	NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg18_v1_chr1_+_99884018_99884485	0.0526934	LHX3,4.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr11_+_59580705_59580746	0.0523198	LHX3,4.p2	L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	CR612051|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg18_v1_chr11_+_64950402_64950455	0.0522445	LHX3,4.p2	
hg18_v1_chr14_-_76958984_76959151	0.0519337	LHX3,4.p2	NM_138791|C14orf148|122945|chromosome 14 open reading frame 148	BC066965|C14orf148|122945|chromosome 14 open reading frame 148	NM_001113475|C14orf148|122945|chromosome 14 open reading frame 148	AK057371|C14orf148|122945|chromosome 14 open reading frame 148
hg18_v1_chr19_-_58449919_58449951	0.0514124	LHX3,4.p2	BC050038|ZNF677|342926|zinc finger protein 677	NM_182609|ZNF677|342926|zinc finger protein 677	AK308120|ZNF677|342926|zinc finger protein 677	BX648243|ZNF677|342926|zinc finger protein 677
hg18_v1_chr5_+_121215548_121215548	0.0508328	LHX3,4.p2	BC034419|FTMT|94033|ferritin mitochondrial	NM_177478|FTMT|94033|ferritin mitochondrial
hg18_v1_chr2_-_218865451_218865547	0.0506395	LHX3,4.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	CR603628|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg18_v1_chr11_+_20577521_20577526	0.0506209	LHX3,4.p2	NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
hg18_v1_chr8_-_91066060_91066100	0.0503671	LHX3,4.p2	AK001017|NBN|4683|nibrin	AK289848|NBN|4683|nibrin	BC071590|NBN|4683|nibrin	BC040519|NBN|4683|nibrin	BX640816|NBN|4683|nibrin	NM_002485|NBN|4683|nibrin	AK312410|NBN|4683|nibrin
hg18_v1_chr20_+_1132097_1132167	0.0502922	LHX3,4.p2	AK092524|C20orf202|400831|chromosome 20 open reading frame 202	NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202	BC127730|C20orf202|400831|chromosome 20 open reading frame 202	BC127731|C20orf202|400831|chromosome 20 open reading frame 202	BC141955|C20orf202|400831|chromosome 20 open reading frame 202	BC141956|C20orf202|400831|chromosome 20 open reading frame 202	BC150532|C20orf202|400831|chromosome 20 open reading frame 202
hg18_v1_chr9_+_80134302_80134349	0.0501343	LHX3,4.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr10_+_115302767_115302870	0.0500645	LHX3,4.p2	NM_004132|HABP2|3026|hyaluronan binding protein 2	D49742|HABP2|3026|hyaluronan binding protein 2	S83182|HABP2|3026|hyaluronan binding protein 2	BC031412|HABP2|3026|hyaluronan binding protein 2	AK290832|HABP2|3026|hyaluronan binding protein 2	AK303761|HABP2|3026|hyaluronan binding protein 2	AK303759|HABP2|3026|hyaluronan binding protein 2	DQ890820|HABP2|3026|hyaluronan binding protein 2	DQ893975|HABP2|3026|hyaluronan binding protein 2
hg18_v1_chr21_+_32585994_32585994	0.0498776	LHX3,4.p2	AF454915|MRAP|56246|melanocortin 2 receptor accessory protein	AF454916|MRAP|56246|melanocortin 2 receptor accessory protein	NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein	NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein
hg18_v1_chr2_+_220071780_220072271	0.0496413	LHX3,4.p2	NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR612168|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A	NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A	AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR610071|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR606483|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR623459|GMPPA|29926|GDP-mannose pyrophosphorylase A	BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR594561|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR617537|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR615722|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR625729|GMPPA|29926|GDP-mannose pyrophosphorylase A	CR626618|GMPPA|29926|GDP-mannose pyrophosphorylase A
hg18_v1_chr3_-_115380539_115380673	0.0495307	LHX3,4.p2	AY228457|DRD3|1814|dopamine receptor D3	AY228458|DRD3|1814|dopamine receptor D3	NM_000796|DRD3|1814|dopamine receptor D3	NM_033663|DRD3|1814|dopamine receptor D3	AY228454|DRD3|1814|dopamine receptor D3
hg18_v1_chr15_-_31147376_31147679	0.0494842	LHX3,4.p2	NM_001103184|FMN1|342184|formin 1	BC103692|FMN1|342184|formin 1	BC107593|FMN1|342184|formin 1	AL833157|FMN1|342184|formin 1
hg18_v1_chr1_+_86785346_86785513	0.0493021	LHX3,4.p2	NM_012128|CLCA4|22802|chloride channel accessory 4	AK000072|CLCA4|22802|chloride channel accessory 4	AK314430|CLCA4|22802|chloride channel accessory 4	BC113687|CLCA4|22802|chloride channel accessory 4	BC113689|CLCA4|22802|chloride channel accessory 4	AF127035|CLCA4|22802|chloride channel accessory 4	AY358470|CLCA4|22802|chloride channel accessory 4	AK307785|CLCA4|22802|chloride channel accessory 4	AK307898|CLCA4|22802|chloride channel accessory 4	AK293766|CLCA4|22802|chloride channel accessory 4
hg18_v1_chr1_+_198263352_198263633	0.0491009	LHX3,4.p2	U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2
hg18_v1_chr10_+_91077581_91077751	0.0489969	LHX3,4.p2	NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	CR626380|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3
hg18_v1_chr4_-_87247829_87247829	0.0487268	LHX3,4.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr1_+_103999824_103999950	0.0486427	LHX3,4.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chrX_+_23982981_23982989	0.0485771	LHX3,4.p2	BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg18_v1_chr21_+_30910614_30910644	0.0477595	LHX3,4.p2	AB096955|KRTAP20-1|337975|keratin associated protein 20-1	BC104846|KRTAP20-1|337975|keratin associated protein 20-1	BC104872|KRTAP20-1|337975|keratin associated protein 20-1	NM_181615|KRTAP20-1|337975|keratin associated protein 20-1
hg18_v1_chr3_+_50248678_50248701	0.0477213	LHX3,4.p2	CR610539|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	J03004|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr1_-_60312013_60312029	0.0477161	LHX3,4.p2	BC027878|C1orf87|127795|chromosome 1 open reading frame 87	AK124828|C1orf87|127795|chromosome 1 open reading frame 87	NM_152377|C1orf87|127795|chromosome 1 open reading frame 87
hg18_v1_chr10_+_122600843_122600927	0.0475032	LHX3,4.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr20_+_36534871_36534973	0.0473075	LHX3,4.p2	AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)
hg18_v1_chr1_+_246409910_246409910	0.0472702	LHX3,4.p2	NM_001004688|OR2M2|391194|olfactory receptor, family 2, subfamily M, member 2
hg18_v1_chr17_+_27372135_27372302	0.047212	LHX3,4.p2	AY386261|LRRC37B|114659|leucine rich repeat containing 37B	AK302740|LRRC37B|114659|leucine rich repeat containing 37B	BC117373|LRRC37B|114659|leucine rich repeat containing 37B	BC143578|LRRC37B|114659|leucine rich repeat containing 37B	BC143581|LRRC37B|114659|leucine rich repeat containing 37B	AK310287|LRRC37B|114659|leucine rich repeat containing 37B	NM_052888|LRRC37B|114659|leucine rich repeat containing 37B	AJ314647|LRRC37B|114659|leucine rich repeat containing 37B
hg18_v1_chr14_-_87862676_87862837	0.0471895	LHX3,4.p2	AK315263|KCNK10|54207|potassium channel, subfamily K, member 10	EU978938|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr4_+_41309668_41309684	0.0469863	LHX3,4.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr20_-_13919256_13919261	0.0468029	LHX3,4.p2	BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)
hg18_v1_chr4_+_38740246_38740246	0.0467577	LHX3,4.p2	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)	NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)	NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)
hg18_v1_chr22_-_40012133_40012174	0.046711	LHX3,4.p2	AK303524|RANGAP1|5905|Ran GTPase activating protein 1	NM_002883|RANGAP1|5905|Ran GTPase activating protein 1
hg18_v1_chrX_+_55666557_55666557	0.0466931	LHX3,4.p2	BC012934|FOXR2|139628|forkhead box R2	NM_198451|FOXR2|139628|forkhead box R2
hg18_v1_chr7_-_19151509_19151568	0.0466704	LHX3,4.p2	BC069147|FERD3L|222894|Fer3-like (Drosophila)	BC101135|FERD3L|222894|Fer3-like (Drosophila)	BC101136|FERD3L|222894|Fer3-like (Drosophila)	BC101137|FERD3L|222894|Fer3-like (Drosophila)	BC101138|FERD3L|222894|Fer3-like (Drosophila)	AF517122|FERD3L|222894|Fer3-like (Drosophila)	NM_152898|FERD3L|222894|Fer3-like (Drosophila)
hg18_v1_chr11_-_16454493_16454510	0.0465118	LHX3,4.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr18_+_53170718_53170718	0.0464419	LHX3,4.p2	AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg18_v1_chr3_+_161040343_161040432	0.0463856	LHX3,4.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr20_+_56919233_56919283	0.0462304	LHX3,4.p2	CR609100|GNAS|2778|GNAS complex locus
hg18_v1_chr4_-_77163609_77163673	0.0459476	LHX3,4.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr15_-_43280664_43280664	0.0456637	LHX3,4.p2	AK096267|SHF|90525|Src homology 2 domain containing F	NM_138356|SHF|90525|Src homology 2 domain containing F
hg18_v1_chr3_+_159310631_159310638	0.0454529	LHX3,4.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr17_+_63766874_63766985	0.0451979	LHX3,4.p2	AY358380|ARSG|22901|arylsulfatase G	NM_014960|ARSG|22901|arylsulfatase G
hg18_v1_chr12_+_15590552_15590552	0.0451378	LHX3,4.p2	AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr8_-_102872372_102872380	0.0450126	LHX3,4.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg18_v1_chr10_-_17211795_17211884	0.0449799	LHX3,4.p2	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)	NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)
hg18_v1_chr14_+_54563587_54563771	0.0444822	LHX3,4.p2	NM_080867|SOCS4|122809|suppressor of cytokine signaling 4	NM_199421|SOCS4|122809|suppressor of cytokine signaling 4	BX161418|SOCS4|122809|suppressor of cytokine signaling 4	CR933659|SOCS4|122809|suppressor of cytokine signaling 4	BC060790|SOCS4|122809|suppressor of cytokine signaling 4	AK124083|SOCS4|122809|suppressor of cytokine signaling 4
hg18_v1_chr3_-_168674502_168674527	0.0444809	LHX3,4.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chr16_-_73708118_73708158	0.0443929	LHX3,4.p2	BC040279|LDHD|197257|lactate dehydrogenase D
hg18_v1_chr20_-_19984685_19984689	0.0442613	LHX3,4.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg18_v1_chr11_+_55189189_55189218	0.0442202	LHX3,4.p2	BC137216|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6	BC137218|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6	NM_001004704|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6
hg18_v1_chr15_+_94670160_94670170	0.0440145	LHX3,4.p2	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr14_+_102921522_102921525	0.043992	LHX3,4.p2	BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3
hg18_v1_chr2_-_65013070_65013093	0.0438778	LHX3,4.p2	BC037562|LOC400958|400958|hypothetical LOC400958
hg18_v1_chr11_-_55684368_55684368	0.0436961	LHX3,4.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chrX_+_50044279_50044279	0.0434131	LHX3,4.p2	AJ314764|CCNB3|85417|cyclin B3	AJ314765|CCNB3|85417|cyclin B3	AJ314766|CCNB3|85417|cyclin B3	AJ416458|CCNB3|85417|cyclin B3	NM_033031|CCNB3|85417|cyclin B3	NM_033670|CCNB3|85417|cyclin B3
hg18_v1_chr1_+_221168388_221168492	0.0433965	LHX3,4.p2	AK125728|DISP1|84976|dispatched homolog 1 (Drosophila)	BC007734|DISP1|84976|dispatched homolog 1 (Drosophila)	BC107762|DISP1|84976|dispatched homolog 1 (Drosophila)	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)	AK098669|DISP1|84976|dispatched homolog 1 (Drosophila)
hg18_v1_chr10_-_129581037_129581132	0.0432026	LHX3,4.p2	
hg18_v1_chr21_-_30893063_30893091	0.0430754	LHX3,4.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr2_-_241860871_241860915	0.0428186	LHX3,4.p2	M64098|HDLBP|3069|high density lipoprotein binding protein
hg18_v1_chr6_+_151603201_151603241	0.0428179	LHX3,4.p2	U81607|AKAP12|9590|A kinase (PRKA) anchor protein 12	AB210003|AKAP12|9590|A kinase (PRKA) anchor protein 12	BC046095|AKAP12|9590|A kinase (PRKA) anchor protein 12	AK307578|AKAP12|9590|A kinase (PRKA) anchor protein 12
hg18_v1_chr12_+_91654395_91654441	0.0426216	LHX3,4.p2	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7	AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7
hg18_v1_chr11_+_48303047_48303068	0.0423443	LHX3,4.p2	BC136853|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3	BC136854|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3	NM_001004702|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3
hg18_v1_chr10_-_61570665_61570779	0.0417341	LHX3,4.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chrX_-_30237403_30237415	0.0416545	LHX3,4.p2	BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1	NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1
hg18_v1_chr4_-_138673078_138673107	0.0413896	LHX3,4.p2	AB046782|PCDH18|54510|protocadherin 18	NM_019035|PCDH18|54510|protocadherin 18	AK298607|PCDH18|54510|protocadherin 18	BC071581|PCDH18|54510|protocadherin 18	BX647786|PCDH18|54510|protocadherin 18
hg18_v1_chr1_-_90955365_90955381	0.0413064	LHX3,4.p2	BC126439|BARHL2|343472|BarH-like homeobox 2	BC126441|BARHL2|343472|BarH-like homeobox 2	AY338397|BARHL2|343472|BarH-like homeobox 2	NM_020063|BARHL2|343472|BarH-like homeobox 2
hg18_v1_chr9_-_94206648_94206801	0.0411776	LHX3,4.p2	AF086912|OGN|4969|osteoglycin	AF100758|OGN|4969|osteoglycin	CR614070|OGN|4969|osteoglycin	NM_014057|OGN|4969|osteoglycin	NM_033014|OGN|4969|osteoglycin	AK289628|OGN|4969|osteoglycin	AK295433|OGN|4969|osteoglycin
hg18_v1_chr19_+_52113772_52113772	0.0411696	LHX3,4.p2	AB051509|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	AF159851|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC131565|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	BC150257|GRLF1|2909|glucocorticoid receptor DNA binding factor 1	NM_004491|GRLF1|2909|glucocorticoid receptor DNA binding factor 1
hg18_v1_chr11_+_119862014_119862139	0.0411548	LHX3,4.p2	CR592713|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12
hg18_v1_chr14_+_101345878_101345994	0.0410654	LHX3,4.p2	NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	CR597926|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	CR600629|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	CR605905|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	CR611892|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma
hg18_v1_chr5_+_140742585_140742759	0.0409466	LHX3,4.p2	BC136747|PCDHGA7|56108|protocadherin gamma subfamily A, 7	BC136748|PCDHGA7|56108|protocadherin gamma subfamily A, 7	AF152327|PCDHGA7|56108|protocadherin gamma subfamily A, 7	AF152514|PCDHGA7|56108|protocadherin gamma subfamily A, 7	NM_018920|PCDHGA7|56108|protocadherin gamma subfamily A, 7	NM_032087|PCDHGA7|56108|protocadherin gamma subfamily A, 7	AB208958|PCDHGA7|56108|protocadherin gamma subfamily A, 7
hg18_v1_chr16_-_73708165_73708196	0.0408224	LHX3,4.p2	AY092767|LDHD|197257|lactate dehydrogenase D	BC047902|LDHD|197257|lactate dehydrogenase D	NM_153486|LDHD|197257|lactate dehydrogenase D	NM_194436|LDHD|197257|lactate dehydrogenase D
hg18_v1_chr14_+_19735334_19735334	0.040757	LHX3,4.p2	NM_001005503|OR11G2|390439|olfactory receptor, family 11, subfamily G, member 2
hg18_v1_chr3_+_149898347_149898407	0.0406983	LHX3,4.p2	NM_000685|AGTR1|185|angiotensin II receptor, type 1	NM_004835|AGTR1|185|angiotensin II receptor, type 1	NM_009585|AGTR1|185|angiotensin II receptor, type 1	NM_031850|AGTR1|185|angiotensin II receptor, type 1	AK291541|AGTR1|185|angiotensin II receptor, type 1	BC068494|AGTR1|185|angiotensin II receptor, type 1	BC022447|AGTR1|185|angiotensin II receptor, type 1	CR601313|AGTR1|185|angiotensin II receptor, type 1	M87290|AGTR1|185|angiotensin II receptor, type 1	S77410|AGTR1|185|angiotensin II receptor, type 1	X65699|AGTR1|185|angiotensin II receptor, type 1
hg18_v1_chr4_-_57242492_57242628	0.0402916	LHX3,4.p2	CR611831|HOPX|84525|HOP homeobox	AF492675|HOPX|84525|HOP homeobox	NM_001145460|HOPX|84525|HOP homeobox	NM_032495|HOPX|84525|HOP homeobox	NM_139212|HOPX|84525|HOP homeobox
hg18_v1_chr4_-_184480572_184480572	0.0402181	LHX3,4.p2	NM_001185149|CLDN24|100132463|claudin 24
hg18_v1_chr10_-_22332646_22332696	0.0401734	LHX3,4.p2	BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1	AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1
hg18_v1_chr19_-_3723208_3723218	0.0401263	LHX3,4.p2	AY211277|RAX2|84839|retina and anterior neural fold homeobox 2	BC007284|RAX2|84839|retina and anterior neural fold homeobox 2	BC018709|RAX2|84839|retina and anterior neural fold homeobox 2	BC032512|RAX2|84839|retina and anterior neural fold homeobox 2	NM_032753|RAX2|84839|retina and anterior neural fold homeobox 2
hg18_v1_chr3_-_167037861_167037914	0.0400013	LHX3,4.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	CR611139|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg18_v1_chr12_+_55201854_55202074	0.0399304	LHX3,4.p2	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	CR594007|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	CR611083|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	CR612928|RBMS2|5939|RNA binding motif, single stranded interacting protein 2
hg18_v1_chr14_+_71065794_71065794	0.0397801	LHX3,4.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr2_+_27573206_27573256	0.0393607	LHX3,4.p2	NM_001486|GCKR|2646|glucokinase (hexokinase 4) regulator	Z48475|GCKR|2646|glucokinase (hexokinase 4) regulator	AK298448|GCKR|2646|glucokinase (hexokinase 4) regulator	AK303784|GCKR|2646|glucokinase (hexokinase 4) regulator	AK291846|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130481|GCKR|2646|glucokinase (hexokinase 4) regulator	BC130483|GCKR|2646|glucokinase (hexokinase 4) regulator	AK309599|GCKR|2646|glucokinase (hexokinase 4) regulator
hg18_v1_chr13_-_43908937_43908969	0.039333	LHX3,4.p2	U35048|TSC22D1|8848|TSC22 domain family, member 1	AJ222700|TSC22D1|8848|TSC22 domain family, member 1	BC105277|TSC22D1|8848|TSC22 domain family, member 1	CR599393|TSC22D1|8848|TSC22 domain family, member 1	CR604671|TSC22D1|8848|TSC22 domain family, member 1	CR619247|TSC22D1|8848|TSC22 domain family, member 1	BC069207|TSC22D1|8848|TSC22 domain family, member 1	CR613638|TSC22D1|8848|TSC22 domain family, member 1	CR618349|TSC22D1|8848|TSC22 domain family, member 1
hg18_v1_chr8_+_67201684_67202105	0.0393036	LHX3,4.p2	AK091310|TRIM55|84675|tripartite motif containing 55	AJ243488|TRIM55|84675|tripartite motif containing 55	AJ243489|TRIM55|84675|tripartite motif containing 55	AJ277493|TRIM55|84675|tripartite motif containing 55	AJ431704|TRIM55|84675|tripartite motif containing 55	NM_033058|TRIM55|84675|tripartite motif containing 55	NM_184085|TRIM55|84675|tripartite motif containing 55	NM_184086|TRIM55|84675|tripartite motif containing 55	NM_184087|TRIM55|84675|tripartite motif containing 55	AJ291712|TRIM55|84675|tripartite motif containing 55	BC007750|TRIM55|84675|tripartite motif containing 55	AK091728|TRIM55|84675|tripartite motif containing 55	BT007212|TRIM55|84675|tripartite motif containing 55
hg18_v1_chr11_-_33139449_33139655	0.0392752	LHX3,4.p2	BC059948|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	U15782|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	BC108319|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	BC009792|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	AK297371|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	AK290836|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	NM_001033505|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	NM_001033506|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa	NM_001326|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg18_v1_chr11_-_111539881_111540056	0.0392261	LHX3,4.p2	AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)	NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)
hg18_v1_chr1_+_165957780_165958124	0.0390755	LHX3,4.p2	NM_001146191|MPZL1|9019|myelin protein zero-like 1	NM_003953|MPZL1|9019|myelin protein zero-like 1	NM_024569|MPZL1|9019|myelin protein zero-like 1	AK297112|MPZL1|9019|myelin protein zero-like 1	AK075334|MPZL1|9019|myelin protein zero-like 1	AK307250|MPZL1|9019|myelin protein zero-like 1	AK291249|MPZL1|9019|myelin protein zero-like 1	AY359019|MPZL1|9019|myelin protein zero-like 1	AF181660|MPZL1|9019|myelin protein zero-like 1	AF478447|MPZL1|9019|myelin protein zero-like 1	BC000984|MPZL1|9019|myelin protein zero-like 1	CR604001|MPZL1|9019|myelin protein zero-like 1	BC007881|MPZL1|9019|myelin protein zero-like 1	AF095727|MPZL1|9019|myelin protein zero-like 1	AF087020|MPZL1|9019|myelin protein zero-like 1	AF092425|MPZL1|9019|myelin protein zero-like 1	AF095726|MPZL1|9019|myelin protein zero-like 1	AK315546|MPZL1|9019|myelin protein zero-like 1	AF239756|MPZL1|9019|myelin protein zero-like 1	BT019542|MPZL1|9019|myelin protein zero-like 1	CR542160|MPZL1|9019|myelin protein zero-like 1
hg18_v1_chr2_+_108230082_108230082	0.0388781	LHX3,4.p2	NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3
hg18_v1_chr5_-_10814179_10814340	0.0388645	LHX3,4.p2	CR542184|DAP|1611|death-associated protein	AK311783|DAP|1611|death-associated protein	CR607455|DAP|1611|death-associated protein	X76105|DAP|1611|death-associated protein	AK298670|DAP|1611|death-associated protein
hg18_v1_chr1_-_204011166_204011237	0.03874	LHX3,4.p2	BC002585|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	BX647960|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK308359|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK311085|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	AK313000|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135662|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135663|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_001135664|RAB7L1|8934|RAB7, member RAS oncogene family-like 1	NM_003929|RAB7L1|8934|RAB7, member RAS oncogene family-like 1
hg18_v1_chr16_+_68238460_68238571	0.0385417	LHX3,4.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr19_-_7718396_7718463	0.0383732	LHX3,4.p2	AY042221|CD209|30835|CD209 molecule	AY042222|CD209|30835|CD209 molecule	AY042223|CD209|30835|CD209 molecule	AY042224|CD209|30835|CD209 molecule	AY042225|CD209|30835|CD209 molecule	AY042226|CD209|30835|CD209 molecule	AY042227|CD209|30835|CD209 molecule	AY042228|CD209|30835|CD209 molecule	AY042229|CD209|30835|CD209 molecule	AY042230|CD209|30835|CD209 molecule	AY042231|CD209|30835|CD209 molecule	AY042232|CD209|30835|CD209 molecule	AY042233|CD209|30835|CD209 molecule	BC110615|CD209|30835|CD209 molecule	AF290886|CD209|30835|CD209 molecule	AK293089|CD209|30835|CD209 molecule	M98457|CD209|30835|CD209 molecule	AK304190|CD209|30835|CD209 molecule	AK313585|CD209|30835|CD209 molecule	NM_001144893|CD209|30835|CD209 molecule	NM_001144894|CD209|30835|CD209 molecule	NM_001144895|CD209|30835|CD209 molecule	NM_001144896|CD209|30835|CD209 molecule	NM_001144897|CD209|30835|CD209 molecule	NM_001144899|CD209|30835|CD209 molecule	NM_021155|CD209|30835|CD209 molecule
hg18_v1_chr1_-_120240635_120240660	0.0382538	LHX3,4.p2	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30
hg18_v1_chr17_-_4879423_4879450	0.0381673	LHX3,4.p2	AB362534|GPR172B|55065|G protein-coupled receptor 172B	AK023570|GPR172B|55065|G protein-coupled receptor 172B	AB362533|GPR172B|55065|G protein-coupled receptor 172B	BC060810|GPR172B|55065|G protein-coupled receptor 172B	NM_001104577|GPR172B|55065|G protein-coupled receptor 172B	NM_017986|GPR172B|55065|G protein-coupled receptor 172B
hg18_v1_chr11_-_83661878_83661970	0.0381616	LHX3,4.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr17_+_12510030_12510062	0.0381546	LHX3,4.p2	AK128608|MYOCD|93649|myocardin	AK292885|MYOCD|93649|myocardin
hg18_v1_chr5_-_100266769_100266886	0.0380415	LHX3,4.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr2_-_241860923_241861080	0.0377649	LHX3,4.p2	NM_203346|HDLBP|3069|high density lipoprotein binding protein
hg18_v1_chr5_-_20024050_20024109	0.0376161	LHX3,4.p2	AK295087|CDH18|1016|cadherin 18, type 2	BC031051|CDH18|1016|cadherin 18, type 2	NM_001167667|CDH18|1016|cadherin 18, type 2	NM_004934|CDH18|1016|cadherin 18, type 2
hg18_v1_chr2_+_137464931_137464931	0.0373854	LHX3,4.p2	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B
hg18_v1_chr14_-_31026901_31026901	0.0373436	LHX3,4.p2	GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)
hg18_v1_chr1_-_104040594_104040595	0.0372219	LHX3,4.p2	AK292341|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr3_+_179736917_179736917	0.0371854	LHX3,4.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr2_-_158008763_158008857	0.0371244	LHX3,4.p2	L06633|CYTIP|9595|cytohesin 1 interacting protein	CR611736|CYTIP|9595|cytohesin 1 interacting protein	AF068836|CYTIP|9595|cytohesin 1 interacting protein	BC036449|CYTIP|9595|cytohesin 1 interacting protein	CR594595|CYTIP|9595|cytohesin 1 interacting protein	AK312753|CYTIP|9595|cytohesin 1 interacting protein	NM_004288|CYTIP|9595|cytohesin 1 interacting protein
hg18_v1_chr10_-_69422391_69422437	0.0371223	LHX3,4.p2	AK027835|HERC4|26091|hect domain and RLD 4
hg18_v1_chr4_-_9650931_9651109	0.0370812	LHX3,4.p2	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9
hg18_v1_chr17_-_60323836_60323871	0.0370197	LHX3,4.p2	BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3	BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3
hg18_v1_chr7_+_156716694_156716841	0.0369922	LHX3,4.p2	
hg18_v1_chr11_-_5980953_5980999	0.0368952	LHX3,4.p2	NM_001005179|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4	BC136986|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4
hg18_v1_chr3_+_101694098_101694188	0.0368894	LHX3,4.p2	AK000996|TMEM45A|55076|transmembrane protein 45A	AY450392|TMEM45A|55076|transmembrane protein 45A	NM_018004|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr13_+_108079570_108079571	0.0368105	LHX3,4.p2	AB290159|MYO16|23026|myosin XVI	AK127806|MYO16|23026|myosin XVI	NM_001198950|MYO16|23026|myosin XVI
hg18_v1_chr5_+_147562531_147562596	0.0365015	LHX3,4.p2	GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6
hg18_v1_chr3_+_51550635_51550635	0.0364095	LHX3,4.p2	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)	NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)
hg18_v1_chr15_-_38953628_38953850	0.0363024	LHX3,4.p2	AY059636|RHOV|171177|ras homolog gene family, member V	CR615243|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	CR618466|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	CR599960|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg18_v1_chr2_-_191580567_191580627	0.0356626	LHX3,4.p2	BC141921|STAT1|6772|signal transducer and activator of transcription 1, 91kDa
hg18_v1_chr2_-_136311219_136311219	0.0356091	LHX3,4.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr3_+_50248649_50248650	0.0355705	LHX3,4.p2	NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr10_+_5396975_5397054	0.0352986	LHX3,4.p2	NM_053049|UCN3|114131|urocortin 3 (stresscopin)	BC100867|UCN3|114131|urocortin 3 (stresscopin)	BC100868|UCN3|114131|urocortin 3 (stresscopin)	BC100869|UCN3|114131|urocortin 3 (stresscopin)	BC100870|UCN3|114131|urocortin 3 (stresscopin)
hg18_v1_chr3_+_142525744_142525748	0.0351017	LHX3,4.p2	BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38	NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38
hg18_v1_chr4_+_41309690_41309848	0.0351013	LHX3,4.p2	AK299835|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr11_-_4675524_4675651	0.0350517	LHX3,4.p2	BC020768|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AF369708|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AY033942|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	AK314051|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	NM_030774|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2
hg18_v1_chrX_+_37524250_37524275	0.0346249	LHX3,4.p2	AK304033|CYBB|1536|cytochrome b-245, beta polypeptide	AK301491|CYBB|1536|cytochrome b-245, beta polypeptide	AK312929|CYBB|1536|cytochrome b-245, beta polypeptide	AK301476|CYBB|1536|cytochrome b-245, beta polypeptide	X04011|CYBB|1536|cytochrome b-245, beta polypeptide	DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide	DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide	CR622452|CYBB|1536|cytochrome b-245, beta polypeptide	CR601230|CYBB|1536|cytochrome b-245, beta polypeptide
hg18_v1_chr1_-_93919789_93920042	0.0345992	LHX3,4.p2	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3	BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3	AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3	NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3
hg18_v1_chr13_+_49658016_49658092	0.0345663	LHX3,4.p2	
hg18_v1_chr4_+_41234944_41234981	0.0343804	LHX3,4.p2	BC023546|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr11_+_55096179_55096179	0.0343725	LHX3,4.p2	NM_001004701|OR4C16|219428|olfactory receptor, family 4, subfamily C, member 16
hg18_v1_chr1_+_158441738_158441768	0.0342587	LHX3,4.p2	NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15	BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15
hg18_v1_chrX_-_71375485_71375633	0.0340902	LHX3,4.p2	EU069463|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	BC111486|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	NM_017669|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like	AK056494|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg18_v1_chr14_-_106084085_106084503	0.0339262	LHX3,4.p2	AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31	BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr3_+_124403463_124403498	0.033855	LHX3,4.p2	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)
hg18_v1_chr1_-_147665783_147665858	0.0337941	LHX3,4.p2	BC110793|HIST2H2BF|440689|histone cluster 2, H2bf
hg18_v1_chr1_-_54183833_54183875	0.0336702	LHX3,4.p2	AK225916|HSPB11|51668|heat shock protein family B (small), member 11	AF100747|HSPB11|51668|heat shock protein family B (small), member 11	BC005245|HSPB11|51668|heat shock protein family B (small), member 11	NM_016126|HSPB11|51668|heat shock protein family B (small), member 11
hg18_v1_chr2_-_225086564_225086597	0.0336415	LHX3,4.p2	U58089|CUL3|8452|cullin 3
hg18_v1_chr20_+_3724905_3725106	0.0335262	LHX3,4.p2	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)	M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)
hg18_v1_chr13_-_48873735_48873735	0.0335088	LHX3,4.p2	NM_030925|CAB39L|81617|calcium binding protein 39-like
hg18_v1_chr3_+_50248639_50248645	0.0333839	LHX3,4.p2	AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	CR593068|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr17_-_18118441_18118502	0.0331954	LHX3,4.p2	AF086042|TOP3A|7156|topoisomerase (DNA) III alpha
hg18_v1_chr7_-_14847479_14847599	0.0331087	LHX3,4.p2	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa	BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa	NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa
hg18_v1_chr17_-_36444626_36444632	0.0330138	LHX3,4.p2	BC101150|KRTAP1-3|81850|keratin associated protein 1-3	BC101151|KRTAP1-3|81850|keratin associated protein 1-3	BC101153|KRTAP1-3|81850|keratin associated protein 1-3	BC069161|KRTAP1-3|81850|keratin associated protein 1-3	AJ406927|KRTAP1-3|81850|keratin associated protein 1-3	NM_030966|KRTAP1-3|81850|keratin associated protein 1-3
hg18_v1_chr6_+_158358067_158358254	0.0329783	LHX3,4.p2	NM_001178088|SYNJ2|8871|synaptojanin 2	BX648749|SYNJ2|8871|synaptojanin 2	AB002346|SYNJ2|8871|synaptojanin 2	AF039945|SYNJ2|8871|synaptojanin 2
hg18_v1_chr5_-_148014282_148014284	0.0325635	LHX3,4.p2	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4
hg18_v1_chr16_+_80301165_80301595	0.0324187	LHX3,4.p2	CR594637|CMIP|80790|c-Maf-inducing protein
hg18_v1_chr6_-_79732391_79732552	0.0324123	LHX3,4.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr12_+_79625538_79625629	0.0323754	LHX3,4.p2	NM_002469|MYF6|4618|myogenic factor 6 (herculin)	AK313287|MYF6|4618|myogenic factor 6 (herculin)	X52011|MYF6|4618|myogenic factor 6 (herculin)	BC017834|MYF6|4618|myogenic factor 6 (herculin)	DQ893248|MYF6|4618|myogenic factor 6 (herculin)	DQ896577|MYF6|4618|myogenic factor 6 (herculin)	CR407641|MYF6|4618|myogenic factor 6 (herculin)	CR541763|MYF6|4618|myogenic factor 6 (herculin)
hg18_v1_chr1_+_36160375_36160517	0.0323236	LHX3,4.p2	AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr12_+_70618892_70619023	0.0323066	LHX3,4.p2	AY098914|TPH2|121278|tryptophan hydroxylase 2	NM_173353|TPH2|121278|tryptophan hydroxylase 2	BC114442|TPH2|121278|tryptophan hydroxylase 2	BC114499|TPH2|121278|tryptophan hydroxylase 2	AK094614|TPH2|121278|tryptophan hydroxylase 2
hg18_v1_chr6_+_72949092_72949175	0.0322222	LHX3,4.p2	AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr8_-_110762409_110762409	0.0320583	LHX3,4.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr4_-_2200755_2200755	0.0320192	LHX3,4.p2	AY136549|POLN|353497|polymerase (DNA directed) nu	NM_181808|POLN|353497|polymerase (DNA directed) nu
hg18_v1_chr1_-_226679648_226679696	0.03192	LHX3,4.p2	BC069079|HIST3H3|8290|histone cluster 3, H3	CR542013|HIST3H3|8290|histone cluster 3, H3	NM_003493|HIST3H3|8290|histone cluster 3, H3	AK312217|HIST3H3|8290|histone cluster 3, H3	BC101837|HIST3H3|8290|histone cluster 3, H3	BC101839|HIST3H3|8290|histone cluster 3, H3
hg18_v1_chr7_-_35192177_35192458	0.0318978	LHX3,4.p2	BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)
hg18_v1_chr3_-_78749633_78749718	0.0317337	LHX3,4.p2	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg18_v1_chr10_-_129581192_129581202	0.0316884	LHX3,4.p2	BC029478|CLRN3|119467|clarin 3	NM_152311|CLRN3|119467|clarin 3
hg18_v1_chr1_-_159257567_159257594	0.031579	LHX3,4.p2	CR617107|F11R|50848|F11 receptor	CR608619|F11R|50848|F11 receptor
hg18_v1_chr13_-_45524846_45524922	0.0314201	LHX3,4.p2	BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13	AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13	AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13	NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13
hg18_v1_chr2_-_210888010_210888158	0.0311837	LHX3,4.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr4_-_185376012_185376107	0.0311556	LHX3,4.p2	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6	NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6
hg18_v1_chr14_-_34168911_34169014	0.0310914	LHX3,4.p2	CR590030|SNX6|58533|sorting nexin 6
hg18_v1_chr4_+_69465107_69465148	0.0307361	LHX3,4.p2	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E	NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E	AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E	AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E	AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E	BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E
hg18_v1_chr1_+_151270301_151270304	0.0303876	LHX3,4.p2	M19888|SPRR1B|6699|small proline-rich protein 1B	BC056240|SPRR1B|6699|small proline-rich protein 1B	M21300|SPRR1B|6699|small proline-rich protein 1B	NM_003125|SPRR1B|6699|small proline-rich protein 1B	M21301|SPRR1B|6699|small proline-rich protein 1B
hg18_v1_chr3_+_161040439_161040667	0.0302444	LHX3,4.p2	CR593613|SCHIP1|29970|schwannomin interacting protein 1	BC005947|SCHIP1|29970|schwannomin interacting protein 1	CR607434|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr1_+_119712918_119713016	0.0302228	LHX3,4.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr3_+_50248579_50248636	0.0301392	LHX3,4.p2	BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2
hg18_v1_chr1_-_35223510_35223514	0.0301364	LHX3,4.p2	AK129824|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chr8_+_67096344_67096402	0.0300436	LHX3,4.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg18_v1_chr19_-_62370667_62370667	0.029772	LHX3,4.p2	NM_001012729|DUXA|503835|double homeobox A
hg18_v1_chr7_+_63305015_63305015	0.0296112	LHX3,4.p2	NM_001159524|ZNF735|730291|zinc finger protein 735
hg18_v1_chr11_-_56067308_56067332	0.0295856	LHX3,4.p2	NM_001005245|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11	BC136951|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11	BC136953|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11
hg18_v1_chr11_-_27679617_27679755	0.0295818	LHX3,4.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr11_-_56137553_56137553	0.0295185	LHX3,4.p2	NM_001004740|OR5M1|390168|olfactory receptor, family 5, subfamily M, member 1
hg18_v1_chr7_+_134321784_134321867	0.0293352	LHX3,4.p2	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3	NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3	BC030651|AGBL3|340351|ATP/GTP binding protein-like 3	AL832281|AGBL3|340351|ATP/GTP binding protein-like 3	AK023045|AGBL3|340351|ATP/GTP binding protein-like 3
hg18_v1_chr13_+_81162030_81162069	0.0292476	LHX3,4.p2	
hg18_v1_chr4_+_35959638_35959645	0.029023	LHX3,4.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg18_v1_chr5_-_22248630_22248646	0.0290172	LHX3,4.p2	AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr11_-_7775064_7775095	0.0289182	LHX3,4.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr10_-_46593923_46594128	0.0287039	LHX3,4.p2	DQ893430|ANXA8L2|244|annexin A8-like 2	DQ896775|ANXA8|653145|annexin A8	M81844|ANXA8|653145|annexin A8	AK223149|ANXA8L2|244|annexin A8-like 2	AK300139|ANXA8|653145|annexin A8	BC021910|LOC653110|653110|hypothetical LOC653110	X16662|ANXA8L2|244|annexin A8-like 2	BC004376|ANXA8|653145|annexin A8	NM_001098845|ANXA8L1|728113|annexin A8-like 1	Z36830|ANXA8|653145|annexin A8	BC073755|ANXA8|653145|annexin A8	BC008813|ANXA8L2|244|annexin A8-like 2	NM_001040084|ANXA8|653145|annexin A8	AK298761|ANXA8|653145|annexin A8
hg18_v1_chr17_-_16197433_16197542	0.0286661	LHX3,4.p2	AF514992|CENPV|201161|centromere protein V	NM_181716|CENPV|201161|centromere protein V	BC052604|CENPV|201161|centromere protein V
hg18_v1_chr11_+_22652957_22652991	0.0286306	LHX3,4.p2	CR450285|GAS2|2620|growth arrest-specific 2
hg18_v1_chr4_+_146820805_146820805	0.0286082	LHX3,4.p2	NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51
hg18_v1_chr14_+_87921818_87921915	0.0284917	LHX3,4.p2	AK055864|SPATA7|55812|spermatogenesis associated 7	AM393238|SPATA7|55812|spermatogenesis associated 7	CR533563|SPATA7|55812|spermatogenesis associated 7
hg18_v1_chr1_+_158636987_158637019	0.0282966	LHX3,4.p2	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)
hg18_v1_chr8_+_26569709_26569818	0.0278582	LHX3,4.p2	CR594253|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr3_-_102522093_102522131	0.0277641	LHX3,4.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr8_-_20084892_20084996	0.0276222	LHX3,4.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR621905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR593627|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg18_v1_chr8_-_11966664_11966664	0.0275246	LHX3,4.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chr19_+_9347991_9348086	0.0274113	LHX3,4.p2	NM_001172651|ZNF177|7730|zinc finger protein 177	AK302274|ZNF177|7730|zinc finger protein 177
hg18_v1_chr1_-_172228673_172228832	0.0272161	LHX3,4.p2	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1	BC136784|RC3H1|149041|ring finger and CCCH-type domains 1	BC144408|RC3H1|149041|ring finger and CCCH-type domains 1	AK122948|RC3H1|149041|ring finger and CCCH-type domains 1	NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr3_+_120799411_120799450	0.0271019	LHX3,4.p2	AK301880|PLA1A|51365|phospholipase A1 member A	NM_015900|PLA1A|51365|phospholipase A1 member A	AK222705|PLA1A|51365|phospholipase A1 member A	AK313519|PLA1A|51365|phospholipase A1 member A	BC035347|PLA1A|51365|phospholipase A1 member A	BC047703|PLA1A|51365|phospholipase A1 member A	U37591|PLA1A|51365|phospholipase A1 member A	AF035268|PLA1A|51365|phospholipase A1 member A	AF035269|PLA1A|51365|phospholipase A1 member A
hg18_v1_chr11_-_114593838_114593879	0.0269952	LHX3,4.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr13_-_101852028_101852124	0.0269235	LHX3,4.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg18_v1_chr8_+_17866373_17866408	0.0268747	LHX3,4.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr5_+_145296313_145296416	0.0265691	LHX3,4.p2	NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2	AK074234|SH3RF2|153769|SH3 domain containing ring finger 2	AK292576|SH3RF2|153769|SH3 domain containing ring finger 2	BC125106|SH3RF2|153769|SH3 domain containing ring finger 2	BC125107|SH3RF2|153769|SH3 domain containing ring finger 2
hg18_v1_chr8_-_29263714_29264265	0.0264858	LHX3,4.p2	EU831463|DUSP4|1846|dual specificity phosphatase 4	EU831550|DUSP4|1846|dual specificity phosphatase 4	S80632|DUSP4|1846|dual specificity phosphatase 4	U48807|DUSP4|1846|dual specificity phosphatase 4	BC002671|DUSP4|1846|dual specificity phosphatase 4	U21108|DUSP4|1846|dual specificity phosphatase 4	BC014565|DUSP4|1846|dual specificity phosphatase 4	NM_001394|DUSP4|1846|dual specificity phosphatase 4	AK314820|DUSP4|1846|dual specificity phosphatase 4
hg18_v1_chr21_-_30510113_30510339	0.0264281	LHX3,4.p2	DQ892002|CLDN8|9073|claudin 8	DQ895192|CLDN8|9073|claudin 8	BC058004|CLDN8|9073|claudin 8	AY358707|CLDN8|9073|claudin 8	BC020866|CLDN8|9073|claudin 8	AK223512|CLDN8|9073|claudin 8	AK022269|CLDN8|9073|claudin 8	NM_199328|CLDN8|9073|claudin 8
hg18_v1_chr4_+_95595419_95595528	0.0264194	LHX3,4.p2	BC026029|PDLIM5|10611|PDZ and LIM domain 5	CR610626|PDLIM5|10611|PDZ and LIM domain 5	AM393306|PDLIM5|10611|PDZ and LIM domain 5	AM393394|PDLIM5|10611|PDZ and LIM domain 5	AM393485|PDLIM5|10611|PDZ and LIM domain 5	AM393621|PDLIM5|10611|PDZ and LIM domain 5	AM393813|PDLIM5|10611|PDZ and LIM domain 5	DQ890686|PDLIM5|10611|PDZ and LIM domain 5	DQ893868|PDLIM5|10611|PDZ and LIM domain 5	AY598328|PDLIM5|10611|PDZ and LIM domain 5	BT007328|PDLIM5|10611|PDZ and LIM domain 5
hg18_v1_chr12_+_76749199_76749327	0.0262829	LHX3,4.p2	NM_014903|NAV3|89795|neuron navigator 3	AJ488201|NAV3|89795|neuron navigator 3
hg18_v1_chr5_+_53787187_53787376	0.0260576	LHX3,4.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg18_v1_chr3_-_48105637_48105772	0.0260513	LHX3,4.p2	AK054577|MAP4|4134|microtubule-associated protein 4	NM_001134364|MAP4|4134|microtubule-associated protein 4	NM_002375|MAP4|4134|microtubule-associated protein 4	NM_030885|MAP4|4134|microtubule-associated protein 4
hg18_v1_chrX_-_10504852_10504957	0.0260082	LHX3,4.p2	AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)	NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)
hg18_v1_chr1_-_35223489_35223506	0.0258942	LHX3,4.p2	BC029439|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chr15_-_96875133_96875133	0.0254932	LHX3,4.p2	AK097062|FAM169B|283777|family with sequence similarity 169, member B	NM_182562|FAM169B|283777|family with sequence similarity 169, member B
hg18_v1_chr5_+_132460779_132460801	0.0253835	LHX3,4.p2	AK315862|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr15_-_39151468_39151524	0.0253586	LHX3,4.p2	AK057582|INO80|54617|INO80 homolog (S. cerevisiae)
hg18_v1_chr9_+_92603832_92603883	0.0253262	LHX3,4.p2	AK075020|SYK|6850|spleen tyrosine kinase	NM_001135052|SYK|6850|spleen tyrosine kinase	NM_003177|SYK|6850|spleen tyrosine kinase
hg18_v1_chrX_+_123062143_123062279	0.0251719	LHX3,4.p2	AK026678|STAG2|10735|stromal antigen 2
hg18_v1_chr1_+_246178701_246178782	0.0251104	LHX3,4.p2	BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8	NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8
hg18_v1_chrX_+_48978870_48978873	0.0248488	LHX3,4.p2	NM_014008|CCDC22|28952|coiled-coil domain containing 22
hg18_v1_chr17_+_12509931_12509938	0.0247802	LHX3,4.p2	NM_001146312|MYOCD|93649|myocardin	NM_153604|MYOCD|93649|myocardin	AY764180|MYOCD|93649|myocardin
hg18_v1_chr6_+_131936057_131936115	0.0246871	LHX3,4.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr8_-_13416554_13416799	0.024562	LHX3,4.p2	BC054511|DLC1|10395|deleted in liver cancer 1	AK291682|DLC1|10395|deleted in liver cancer 1	AK024773|DLC1|10395|deleted in liver cancer 1	AK225098|DLC1|10395|deleted in liver cancer 1	AB051510|DLC1|10395|deleted in liver cancer 1	BC049842|DLC1|10395|deleted in liver cancer 1	NM_024767|DLC1|10395|deleted in liver cancer 1	NM_182643|DLC1|10395|deleted in liver cancer 1
hg18_v1_chr11_-_58032153_58032153	0.0240227	LHX3,4.p2	NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21
hg18_v1_chr12_-_7487989_7488019	0.0239928	LHX3,4.p2	GQ397482|CD163L1|283316|CD163 molecule-like 1	AK303372|CD163L1|283316|CD163 molecule-like 1	AF264014|CD163L1|283316|CD163 molecule-like 1	NM_174941|CD163L1|283316|CD163 molecule-like 1	BC104962|CD163L1|283316|CD163 molecule-like 1	BC104964|CD163L1|283316|CD163 molecule-like 1
hg18_v1_chr1_+_246578699_246578699	0.0237268	LHX3,4.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr10_-_100985548_100985621	0.0236725	LHX3,4.p2	AJ299720|HPSE2|60495|heparanase 2	AK094037|HPSE2|60495|heparanase 2	BC112356|HPSE2|60495|heparanase 2	AF282885|HPSE2|60495|heparanase 2	AF282886|HPSE2|60495|heparanase 2	AF282887|HPSE2|60495|heparanase 2	AJ299719|HPSE2|60495|heparanase 2	AK314759|HPSE2|60495|heparanase 2	NM_001166244|HPSE2|60495|heparanase 2	NM_001166245|HPSE2|60495|heparanase 2	NM_001166246|HPSE2|60495|heparanase 2	NM_021828|HPSE2|60495|heparanase 2
hg18_v1_chr3_-_47492421_47492451	0.0236598	LHX3,4.p2	AK291484|SCAP|22937|SREBF chaperone	D83782|SCAP|22937|SREBF chaperone	NM_012235|SCAP|22937|SREBF chaperone
hg18_v1_chr4_-_45820686_45820854	0.0234023	LHX3,4.p2	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1	AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1
hg18_v1_chr9_-_4656665_4656673	0.0233224	LHX3,4.p2	AK295831|C9orf68|55064|chromosome 9 open reading frame 68	NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68
hg18_v1_chr14_-_34169047_34169166	0.0232903	LHX3,4.p2	BC001798|SNX6|58533|sorting nexin 6	NM_021249|SNX6|58533|sorting nexin 6	U83194|SNX6|58533|sorting nexin 6	AF121856|SNX6|58533|sorting nexin 6	CR593172|SNX6|58533|sorting nexin 6	CR625969|SNX6|58533|sorting nexin 6	AK292250|SNX6|58533|sorting nexin 6	AK308464|SNX6|58533|sorting nexin 6	AK296213|SNX6|58533|sorting nexin 6	NM_152233|SNX6|58533|sorting nexin 6
hg18_v1_chr2_+_233961538_233961538	0.0232606	LHX3,4.p2	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa	NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa
hg18_v1_chr14_+_44436176_44436321	0.023035	LHX3,4.p2	NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28	BC105030|C14orf28|122525|chromosome 14 open reading frame 28	BC105032|C14orf28|122525|chromosome 14 open reading frame 28	AF250395|C14orf28|122525|chromosome 14 open reading frame 28
hg18_v1_chr19_+_61039755_61039755	0.0228175	LHX3,4.p2	AK315003|NLRP4|147945|NLR family, pyrin domain containing 4	NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4
hg18_v1_chr8_+_22900863_22900874	0.0226569	LHX3,4.p2	BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2	NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2
hg18_v1_chr6_+_26212082_26212154	0.0226494	LHX3,4.p2	BC130558|HIST1H4C|8364|histone cluster 1, H4c	BC130560|HIST1H4C|8364|histone cluster 1, H4c	EU446977|HIST1H4C|8364|histone cluster 1, H4c	NM_003542|HIST1H4C|8364|histone cluster 1, H4c
hg18_v1_chr18_+_44319365_44320177	0.0226197	LHX3,4.p2	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor	NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor	BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor
hg18_v1_chr17_+_12510089_12510230	0.0224677	LHX3,4.p2	BC126307|MYOCD|93649|myocardin	BC143391|MYOCD|93649|myocardin	AF532596|MYOCD|93649|myocardin
hg18_v1_chr3_-_112796855_112796855	0.0224377	LHX3,4.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg18_v1_chr1_-_35223515_35223538	0.0223888	LHX3,4.p2	NM_001195156|LOC100506144|100506144|hypothetical protein LOC100506144
hg18_v1_chr11_+_22652894_22652930	0.0222351	LHX3,4.p2	NM_005256|GAS2|2620|growth arrest-specific 2	U95032|GAS2|2620|growth arrest-specific 2
hg18_v1_chr9_-_112139908_112139945	0.0221654	LHX3,4.p2	AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)	NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)
hg18_v1_chr21_+_33364316_33364328	0.0219384	LHX3,4.p2	BC033290|OLIG1|116448|oligodendrocyte transcription factor 1	NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1	AL834450|OLIG1|116448|oligodendrocyte transcription factor 1	AB209791|OLIG1|116448|oligodendrocyte transcription factor 1
hg18_v1_chr10_+_86174665_86174686	0.0217639	LHX3,4.p2	AK294321|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr6_-_26343139_26343220	0.0217376	LHX3,4.p2	EU446961|HIST1H1D|3007|histone cluster 1, H1d	AK312845|HIST1H1D|3007|histone cluster 1, H1d	NM_005320|HIST1H1D|3007|histone cluster 1, H1d	BC104874|HIST1H1D|3007|histone cluster 1, H1d	BC111971|HIST1H1D|3007|histone cluster 1, H1d
hg18_v1_chr3_+_110338250_110338256	0.0216933	LHX3,4.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr13_-_47916803_47916840	0.0215511	LHX3,4.p2	BC039373|LPAR6|10161|lysophosphatidic acid receptor 6	BC045651|LPAR6|10161|lysophosphatidic acid receptor 6	NM_005767|LPAR6|10161|lysophosphatidic acid receptor 6
hg18_v1_chr3_+_23904086_23904139	0.0214844	LHX3,4.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr12_+_54672766_54673049	0.0214709	LHX3,4.p2	CR621175|RAB5B|5869|RAB5B, member RAS oncogene family	CR597002|RAB5B|5869|RAB5B, member RAS oncogene family	CR594499|RAB5B|5869|RAB5B, member RAS oncogene family	CR614791|RAB5B|5869|RAB5B, member RAS oncogene family
hg18_v1_chr12_+_40117751_40117958	0.0213106	LHX3,4.p2	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4	AK131554|PDZRN4|29951|PDZ domain containing ring finger 4	NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4	AK091096|PDZRN4|29951|PDZ domain containing ring finger 4	BC093744|PDZRN4|29951|PDZ domain containing ring finger 4	BC093746|PDZRN4|29951|PDZ domain containing ring finger 4
hg18_v1_chr1_-_233358829_233358880	0.0213023	LHX3,4.p2	AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)
hg18_v1_chr11_+_89403921_89403921	0.0210595	LHX3,4.p2	AB037682|TRIM49|57093|tripartite motif containing 49	NM_001195234|TRIM49L2|653111|tripartite motif containing 49-like 2
hg18_v1_chr5_-_35974493_35974637	0.0209719	LHX3,4.p2	NM_001042625|CAPSL|133690|calcyphosine-like	BC017586|CAPSL|133690|calcyphosine-like	NM_144647|CAPSL|133690|calcyphosine-like
hg18_v1_chrX_-_72351381_72351384	0.0209232	LHX3,4.p2	AF136178|NAP1L2|4674|nucleosome assembly protein 1-like 2
hg18_v1_chr2_+_233881047_233881047	0.0208213	LHX3,4.p2	NM_000541|SAG|6295|S-antigen; retina and pineal gland (arrestin)
hg18_v1_chr11_-_18504939_18505072	0.0205902	LHX3,4.p2	DQ892792|TSG101|7251|tumor susceptibility gene 101	DQ896039|TSG101|7251|tumor susceptibility gene 101	AY207473|TSG101|7251|tumor susceptibility gene 101	AY207474|TSG101|7251|tumor susceptibility gene 101	CR606222|TSG101|7251|tumor susceptibility gene 101	CR623726|TSG101|7251|tumor susceptibility gene 101	CR617651|TSG101|7251|tumor susceptibility gene 101	CR598203|TSG101|7251|tumor susceptibility gene 101	CR590804|TSG101|7251|tumor susceptibility gene 101	BC002487|TSG101|7251|tumor susceptibility gene 101	U82130|TSG101|7251|tumor susceptibility gene 101	CR621064|TSG101|7251|tumor susceptibility gene 101	CR594582|TSG101|7251|tumor susceptibility gene 101	CR619803|TSG101|7251|tumor susceptibility gene 101	CR590335|TSG101|7251|tumor susceptibility gene 101	AK130787|TSG101|7251|tumor susceptibility gene 101	CR604898|TSG101|7251|tumor susceptibility gene 101	NM_006292|TSG101|7251|tumor susceptibility gene 101
hg18_v1_chr9_-_113561613_113561633	0.0204942	LHX3,4.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr1_+_195503956_195504165	0.0203066	LHX3,4.p2	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)	NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)	AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)	AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)	AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)	AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)	AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)	AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)	BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)	BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)	AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)
hg18_v1_chr8_-_102872354_102872364	0.0201768	LHX3,4.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg18_v1_chr17_-_36877002_36877163	0.0201759	LHX3,4.p2	X81419|KRT32|3882|keratin 32	NM_002278|KRT32|3882|keratin 32
hg18_v1_chr4_+_152417774_152417774	0.0201697	LHX3,4.p2	BC121109|PRSS48|345062|protease, serine, 48	BC121110|PRSS48|345062|protease, serine, 48	NM_183375|PRSS48|345062|protease, serine, 48
hg18_v1_chr11_-_57964221_57964221	0.0201457	LHX3,4.p2	BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12	BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12	NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12
hg18_v1_chr5_-_111121691_111121813	0.0200649	LHX3,4.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr12_+_42516118_42516228	0.0200392	LHX3,4.p2	BC042192|TMEM117|84216|transmembrane protein 117	BC060798|TMEM117|84216|transmembrane protein 117	AK057287|TMEM117|84216|transmembrane protein 117	BC030284|TMEM117|84216|transmembrane protein 117	AL136855|TMEM117|84216|transmembrane protein 117	NM_032256|TMEM117|84216|transmembrane protein 117
hg18_v1_chr18_-_3209986_3210105	0.0200005	LHX3,4.p2	AJ621424|MYOM1|8736|myomesin 1, 185kDa	AK125322|MYOM1|8736|myomesin 1, 185kDa	NM_003803|MYOM1|8736|myomesin 1, 185kDa	NM_019856|MYOM1|8736|myomesin 1, 185kDa
hg18_v1_chr12_+_54011750_54011751	0.0198477	LHX3,4.p2	NM_054104|OR6C3|254786|olfactory receptor, family 6, subfamily C, member 3
hg18_v1_chr8_-_12220195_12220195	0.0194693	LHX3,4.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chr7_+_119700924_119700957	0.0190006	LHX3,4.p2	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2
hg18_v1_chr2_+_89849009_89849038	0.0189938	LHX3,4.p2	
hg18_v1_chr3_+_123779122_123779219	0.0189547	LHX3,4.p2	NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15	BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15	DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15
hg18_v1_chr5_-_95323180_95323329	0.0188808	LHX3,4.p2	DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2	DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2	AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2	AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2
hg18_v1_chr8_+_92330691_92330722	0.0188188	LHX3,4.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr11_-_71632695_71632852	0.0187902	LHX3,4.p2	EU446462|PHOX2A|401|paired-like homeobox 2a	CR607262|PHOX2A|401|paired-like homeobox 2a	CR593042|PHOX2A|401|paired-like homeobox 2a	CR600761|PHOX2A|401|paired-like homeobox 2a	CR596068|PHOX2A|401|paired-like homeobox 2a	BC041564|PHOX2A|401|paired-like homeobox 2a
hg18_v1_chr14_+_87921740_87921795	0.0185169	LHX3,4.p2	NM_001040428|SPATA7|55812|spermatogenesis associated 7	NM_018418|SPATA7|55812|spermatogenesis associated 7	AF144487|SPATA7|55812|spermatogenesis associated 7	AL136604|SPATA7|55812|spermatogenesis associated 7	AK225746|SPATA7|55812|spermatogenesis associated 7	AK290631|SPATA7|55812|spermatogenesis associated 7	CR618045|SPATA7|55812|spermatogenesis associated 7	AK293007|SPATA7|55812|spermatogenesis associated 7	CR936777|SPATA7|55812|spermatogenesis associated 7
hg18_v1_chr14_-_22574193_22574268	0.0184869	LHX3,4.p2	NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5
hg18_v1_chr2_-_101291483_101291666	0.0184478	LHX3,4.p2	AM392566|RNF149|284996|ring finger protein 149	BC019355|RNF149|284996|ring finger protein 149	BC032328|RNF149|284996|ring finger protein 149	CR621578|RNF149|284996|ring finger protein 149	AK074985|RNF149|284996|ring finger protein 149	AK075141|RNF149|284996|ring finger protein 149	AY450390|RNF149|284996|ring finger protein 149	BC045743|RNF149|284996|ring finger protein 149	CR591001|RNF149|284996|ring finger protein 149	AK129799|RNF149|284996|ring finger protein 149	NM_173647|RNF149|284996|ring finger protein 149
hg18_v1_chr8_-_59575249_59575273	0.0183757	LHX3,4.p2	X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1
hg18_v1_chr12_-_10042956_10043165	0.0182408	LHX3,4.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg18_v1_chr14_-_63264445_63264560	0.0181111	LHX3,4.p2	AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1
hg18_v1_chr4_+_53975597_53975627	0.0176626	LHX3,4.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr21_+_24722913_24722965	0.0175647	LHX3,4.p2	AK124194|FLJ42200|400860|FLJ42200 protein
hg18_v1_chr5_-_24535386_24535386	0.0174681	LHX3,4.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chr11_-_57927457_57927457	0.0172313	LHX3,4.p2	NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3
hg18_v1_chr3_-_47492320_47492362	0.0171393	LHX3,4.p2	AK300311|SCAP|22937|SREBF chaperone
hg18_v1_chr4_+_113437947_113438006	0.017029	LHX3,4.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr1_+_161308318_161308318	0.0168439	LHX3,4.p2	EF054877|RGS4|5999|regulator of G-protein signaling 4	NM_001113380|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr7_+_80113903_80114063	0.0166564	LHX3,4.p2	HM217020|CD36|948|CD36 molecule (thrombospondin receptor)	HM217021|CD36|948|CD36 molecule (thrombospondin receptor)	HM217022|CD36|948|CD36 molecule (thrombospondin receptor)	HM217023|CD36|948|CD36 molecule (thrombospondin receptor)	HM217024|CD36|948|CD36 molecule (thrombospondin receptor)	HM217025|CD36|948|CD36 molecule (thrombospondin receptor)	HM217026|CD36|948|CD36 molecule (thrombospondin receptor)	DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)	DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chrX_+_13581145_13581230	0.0164887	LHX3,4.p2	AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing
hg18_v1_chr2_+_89715037_89715081	0.0163909	LHX3,4.p2	
hg18_v1_chr12_+_91620749_91620749	0.016356	LHX3,4.p2	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74	NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74
hg18_v1_chr2_-_231697999_231698067	0.0161639	LHX3,4.p2	AK313741|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B	BC063123|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B	NM_000867|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B
hg18_v1_chr7_+_5904858_5904955	0.0161515	LHX3,4.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr20_-_49747397_49747573	0.0161224	LHX3,4.p2	BC110591|ATP9A|10079|ATPase, class II, type 9A	BC110592|ATP9A|10079|ATPase, class II, type 9A	BC063701|ATP9A|10079|ATPase, class II, type 9A
hg18_v1_chr9_-_41944687_41945142	0.0160493	LHX3,4.p2	BC019880|MGC21881|389741|hypothetical locus MGC21881	BC040170|MGC21881|389741|hypothetical locus MGC21881	BC000869|MGC21881|389741|hypothetical locus MGC21881	BC015151|MGC21881|389741|hypothetical locus MGC21881	AK092305|MGC21881|389741|hypothetical locus MGC21881	AK095690|MGC21881|389741|hypothetical locus MGC21881	BC027338|MGC21881|389741|hypothetical locus MGC21881
hg18_v1_chr20_-_6052056_6052271	0.0160063	LHX3,4.p2	AB105105|FERMT1|55612|fermitin family member 1	NM_017671|FERMT1|55612|fermitin family member 1
hg18_v1_chr19_+_57531309_57531422	0.0157178	LHX3,4.p2	NM_001161425|ZNF610|162963|zinc finger protein 610	NM_001161426|ZNF610|162963|zinc finger protein 610	NM_001161427|ZNF610|162963|zinc finger protein 610	AK290888|ZNF610|162963|zinc finger protein 610	BC039903|ZNF610|162963|zinc finger protein 610	BC105967|ZNF610|162963|zinc finger protein 610
hg18_v1_chr2_-_61960984_61961005	0.015692	LHX3,4.p2	CR615372|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)
hg18_v1_chr12_-_107943227_107943261	0.0156799	LHX3,4.p2	BC033587|SVOP|55530|SV2 related protein homolog (rat)	NM_018711|SVOP|55530|SV2 related protein homolog (rat)
hg18_v1_chr15_-_46890475_46890634	0.0154428	LHX3,4.p2	BC117182|CEP152|22995|centrosomal protein 152kDa	AB020719|CEP152|22995|centrosomal protein 152kDa	BC069186|CEP152|22995|centrosomal protein 152kDa	AK303805|CEP152|22995|centrosomal protein 152kDa	BX648822|CEP152|22995|centrosomal protein 152kDa	BC107721|CEP152|22995|centrosomal protein 152kDa	NM_001194998|CEP152|22995|centrosomal protein 152kDa	NM_014985|CEP152|22995|centrosomal protein 152kDa
hg18_v1_chr20_+_19985289_19985351	0.0154419	LHX3,4.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg18_v1_chr11_+_30209138_30209138	0.0153998	LHX3,4.p2	NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide	NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide
hg18_v1_chr11_+_101423378_101423408	0.0151533	LHX3,4.p2	NM_001195005|C11orf70|85016|chromosome 11 open reading frame 70	NM_032930|C11orf70|85016|chromosome 11 open reading frame 70	CR603911|C11orf70|85016|chromosome 11 open reading frame 70	AK094851|C11orf70|85016|chromosome 11 open reading frame 70	BC054869|C11orf70|85016|chromosome 11 open reading frame 70	BC006128|C11orf70|85016|chromosome 11 open reading frame 70
hg18_v1_chr9_+_129900637_129900656	0.0151282	LHX3,4.p2	NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr17_+_70984173_70984222	0.0150935	LHX3,4.p2	AK316060|KIAA0195|9772|KIAA0195	AK294526|KIAA0195|9772|KIAA0195	CR936809|KIAA0195|9772|KIAA0195
hg18_v1_chr5_+_115415061_115415061	0.0150274	LHX3,4.p2	NM_001195581|LOC644100|644100|hypothetical LOC644100
hg18_v1_chr2_+_185171480_185171497	0.014945	LHX3,4.p2	BC150198|ZNF804A|91752|zinc finger protein 804A	AK131402|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr17_-_6924227_6924323	0.0149158	LHX3,4.p2	D50532|CLEC10A|10462|C-type lectin domain family 10, member A	BC027858|CLEC10A|10462|C-type lectin domain family 10, member A	BC039011|CLEC10A|10462|C-type lectin domain family 10, member A	CR620226|CLEC10A|10462|C-type lectin domain family 10, member A	AK291975|CLEC10A|10462|C-type lectin domain family 10, member A	AK292363|CLEC10A|10462|C-type lectin domain family 10, member A	NM_006344|CLEC10A|10462|C-type lectin domain family 10, member A	NM_182906|CLEC10A|10462|C-type lectin domain family 10, member A
hg18_v1_chr7_+_94953148_94953310	0.0148905	LHX3,4.p2	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4	AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4	NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4	BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4
hg18_v1_chr22_+_40027398_40027523	0.0147523	LHX3,4.p2	BC152558|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK225891|ZC3H7B|23264|zinc finger CCCH-type containing 7B	AK315009|ZC3H7B|23264|zinc finger CCCH-type containing 7B	NM_017590|ZC3H7B|23264|zinc finger CCCH-type containing 7B	BC098378|ZC3H7B|23264|zinc finger CCCH-type containing 7B
hg18_v1_chr1_-_115070413_115070531	0.014732	LHX3,4.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr10_-_21826192_21826202	0.0146419	LHX3,4.p2	BC040880|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr17_-_36294962_36295023	0.0146367	LHX3,4.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr12_+_54316910_54316942	0.0145645	LHX3,4.p2	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1	NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1
hg18_v1_chr11_-_55815113_55815141	0.0143157	LHX3,4.p2	NM_001005199|OR8H1|219469|olfactory receptor, family 8, subfamily H, member 1	BC136909|OR8H1|219469|olfactory receptor, family 8, subfamily H, member 1	BC136910|OR8H1|219469|olfactory receptor, family 8, subfamily H, member 1
hg18_v1_chr9_+_129900590_129900615	0.0142814	LHX3,4.p2	BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr2_+_185171337_185171398	0.0140961	LHX3,4.p2	AY327407|ZNF804A|91752|zinc finger protein 804A	NM_194250|ZNF804A|91752|zinc finger protein 804A	AK307596|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr3_-_195670256_195670256	0.0140385	LHX3,4.p2	NM_024524|ATP13A3|79572|ATPase type 13A3
hg18_v1_chr3_-_152541129_152541274	0.0138979	LHX3,4.p2	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12
hg18_v1_chr16_-_15644465_15644523	0.0136153	LHX3,4.p2	BC137165|KIAA0430|9665|KIAA0430	BC137170|KIAA0430|9665|KIAA0430	BC144514|KIAA0430|9665|KIAA0430	BC144515|KIAA0430|9665|KIAA0430	AK302667|KIAA0430|9665|KIAA0430	AK095840|KIAA0430|9665|KIAA0430	BC064914|KIAA0430|9665|KIAA0430	NM_001184998|KIAA0430|9665|KIAA0430	NM_001184999|KIAA0430|9665|KIAA0430	NM_014647|KIAA0430|9665|KIAA0430
hg18_v1_chr8_+_107807415_107807647	0.0136111	LHX3,4.p2	AK303695|OXR1|55074|oxidation resistance 1	NM_001198534|OXR1|55074|oxidation resistance 1	NM_001198535|OXR1|55074|oxidation resistance 1	AB075503|OXR1|55074|oxidation resistance 1	AK302844|OXR1|55074|oxidation resistance 1	CR596350|OXR1|55074|oxidation resistance 1	AK316153|OXR1|55074|oxidation resistance 1	FN650109|OXR1|55074|oxidation resistance 1
hg18_v1_chr3_-_167037946_167037977	0.0135684	LHX3,4.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg18_v1_chr15_-_72981595_72981663	0.0135096	LHX3,4.p2	AK025373|C15orf17|57184|chromosome 15 open reading frame 17
hg18_v1_chr17_+_17952744_17952744	0.0134877	LHX3,4.p2	AF144094|MYO15A|51168|myosin XVA	NM_016239|MYO15A|51168|myosin XVA
hg18_v1_chr4_+_74825138_74825239	0.0134666	LHX3,4.p2	NM_000584|IL8|3576|interleukin 8	Y00787|IL8|3576|interleukin 8	AK131067|IL8|3576|interleukin 8	AK311874|IL8|3576|interleukin 8	M17017|IL8|3576|interleukin 8	CR594973|IL8|3576|interleukin 8	CR601902|IL8|3576|interleukin 8	CR603686|IL8|3576|interleukin 8	CR619554|IL8|3576|interleukin 8	CR623683|IL8|3576|interleukin 8	M26383|IL8|3576|interleukin 8	CR623827|IL8|3576|interleukin 8	CR600500|IL8|3576|interleukin 8	CR601533|IL8|3576|interleukin 8	BC013615|IL8|3576|interleukin 8	DQ890564|IL8|3576|interleukin 8	DQ893727|IL8|3576|interleukin 8	BT007067|IL8|3576|interleukin 8	CR542151|IL8|3576|interleukin 8	Z11686|IL8|3576|interleukin 8
hg18_v1_chr9_+_27099138_27099146	0.0134086	LHX3,4.p2	AK294887|TEK|7010|TEK tyrosine kinase, endothelial	NM_000459|TEK|7010|TEK tyrosine kinase, endothelial
hg18_v1_chr5_-_13997588_13997588	0.0133711	LHX3,4.p2	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5	NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5
hg18_v1_chr11_-_27679175_27679175	0.0131212	LHX3,4.p2	EF689011|BDNF|627|brain-derived neurotrophic factor	EF689012|BDNF|627|brain-derived neurotrophic factor	EF689019|BDNF|627|brain-derived neurotrophic factor	EF689020|BDNF|627|brain-derived neurotrophic factor	NM_001143808|BDNF|627|brain-derived neurotrophic factor	NM_001143809|BDNF|627|brain-derived neurotrophic factor	NM_001143810|BDNF|627|brain-derived neurotrophic factor	NM_001143811|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr10_+_15041443_15041443	0.0130285	LHX3,4.p2	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)
hg18_v1_chr5_+_65408500_65408622	0.0130104	LHX3,4.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr15_+_40427592_40427592	0.0129788	LHX3,4.p2	NM_212465|CAPN3|825|calpain 3, (p94)
hg18_v1_chr10_-_7699192_7699255	0.0128924	LHX3,4.p2	AK027849|ITIH5|80760|inter-alpha (globulin) inhibitor H5
hg18_v1_chr6_-_74218699_74218732	0.0126678	LHX3,4.p2	BC113606|MB21D1|115004|Mab-21 domain containing 1	BC113608|MB21D1|115004|Mab-21 domain containing 1	BC143694|MB21D1|115004|Mab-21 domain containing 1	BC012928|MB21D1|115004|Mab-21 domain containing 1	AK097148|MB21D1|115004|Mab-21 domain containing 1	BC108714|MB21D1|115004|Mab-21 domain containing 1
hg18_v1_chr4_-_68511738_68511826	0.0126221	LHX3,4.p2	AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A	BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A	AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A	AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A	AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A	NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A	NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A
hg18_v1_chr5_+_161207262_161207262	0.0125721	LHX3,4.p2	NM_001127643|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr20_+_41621079_41621099	0.0122629	LHX3,4.p2	AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2	CR613964|SGK2|10110|serum/glucocorticoid regulated kinase 2	NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2
hg18_v1_chr6_+_49626071_49626071	0.0121111	LHX3,4.p2	NM_001145652|C6orf141|135398|chromosome 6 open reading frame 141
hg18_v1_chr19_-_48700824_48700926	0.0120784	LHX3,4.p2	BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3	BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3
hg18_v1_chr14_-_20636909_20637012	0.0119594	LHX3,4.p2	AK225811|ZNF219|51222|zinc finger protein 219	AK290700|ZNF219|51222|zinc finger protein 219	NM_001101672|ZNF219|51222|zinc finger protein 219
hg18_v1_chr1_-_172199799_172199884	0.011933	LHX3,4.p2	AK093501|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr1_+_53253204_53253245	0.0118416	LHX3,4.p2	BC005911|SCP2|6342|sterol carrier protein 2	CR595480|SCP2|6342|sterol carrier protein 2	CR618704|SCP2|6342|sterol carrier protein 2	CR612478|SCP2|6342|sterol carrier protein 2	CR620432|SCP2|6342|sterol carrier protein 2	BX537618|SCP2|6342|sterol carrier protein 2	BX537619|SCP2|6342|sterol carrier protein 2	AK303400|SCP2|6342|sterol carrier protein 2	CR594806|SCP2|6342|sterol carrier protein 2
hg18_v1_chr22_+_38296703_38296703	0.0117549	LHX3,4.p2	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit	NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit
hg18_v1_chr4_+_41235077_41235091	0.0116854	LHX3,4.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr6_-_134680888_134680888	0.0116512	LHX3,4.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr2_-_25245062_25245062	0.0116485	LHX3,4.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg18_v1_chr5_-_94250357_94250368	0.0116134	LHX3,4.p2	AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1
hg18_v1_chr7_-_38279757_38279772	0.0115644	LHX3,4.p2	BC062761|TRGV9|6983|T cell receptor gamma variable 9	BC105589|TARP|445347|TCR gamma alternate reading frame protein	AF151103|TARP|445347|TCR gamma alternate reading frame protein	NM_001003799|TARP|445347|TCR gamma alternate reading frame protein	NM_001003806|TARP|445347|TCR gamma alternate reading frame protein
hg18_v1_chr11_-_102100833_102100894	0.0115103	LHX3,4.p2	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)
hg18_v1_chr17_-_10313600_10313600	0.0114974	LHX3,4.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg18_v1_chr7_-_37454933_37455054	0.0113647	LHX3,4.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr12_-_90096275_90096553	0.0113021	LHX3,4.p2	CR596037|DCN|1634|decorin	CR595097|DCN|1634|decorin	CR611506|DCN|1634|decorin	AF138300|DCN|1634|decorin	AF138301|DCN|1634|decorin	AF138302|DCN|1634|decorin	AF138303|DCN|1634|decorin	AF138304|DCN|1634|decorin	BT019800|DCN|1634|decorin	CR407676|DCN|1634|decorin	CR541946|DCN|1634|decorin	NM_133504|DCN|1634|decorin	NM_133505|DCN|1634|decorin	NM_133506|DCN|1634|decorin	NM_133507|DCN|1634|decorin	DQ892556|DCN|1634|decorin	DQ895769|DCN|1634|decorin	BC005322|DCN|1634|decorin	CR601450|DCN|1634|decorin
hg18_v1_chr22_+_38627129_38627258	0.0112237	LHX3,4.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr3_-_196792274_196792364	0.0111932	LHX3,4.p2	NM_001647|APOD|347|apolipoprotein D
hg18_v1_chr1_+_201862548_201862550	0.0111569	LHX3,4.p2	NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg18_v1_chr14_-_106084519_106084523	0.0111423	LHX3,4.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr11_+_4965996_4966015	0.0110601	LHX3,4.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chr10_+_35524835_35524959	0.0109572	LHX3,4.p2	AK289379|CREM|1390|cAMP responsive element modulator	NM_182721|CREM|1390|cAMP responsive element modulator	NM_182722|CREM|1390|cAMP responsive element modulator	NM_182723|CREM|1390|cAMP responsive element modulator	NM_182724|CREM|1390|cAMP responsive element modulator	NM_182725|CREM|1390|cAMP responsive element modulator	AK291566|CREM|1390|cAMP responsive element modulator	CR614277|CREM|1390|cAMP responsive element modulator
hg18_v1_chr10_-_120928266_120928321	0.010686	LHX3,4.p2	EF036492|PRDX3|10935|peroxiredoxin 3	CR609024|PRDX3|10935|peroxiredoxin 3	CR597664|PRDX3|10935|peroxiredoxin 3	CR603233|PRDX3|10935|peroxiredoxin 3	BT020007|PRDX3|10935|peroxiredoxin 3	CR450344|PRDX3|10935|peroxiredoxin 3	AK222659|PRDX3|10935|peroxiredoxin 3	CR596127|PRDX3|10935|peroxiredoxin 3	CR597520|PRDX3|10935|peroxiredoxin 3	BC002685|PRDX3|10935|peroxiredoxin 3	CR601617|PRDX3|10935|peroxiredoxin 3	CR605883|PRDX3|10935|peroxiredoxin 3	CR618914|PRDX3|10935|peroxiredoxin 3	D49396|PRDX3|10935|peroxiredoxin 3	BC009601|PRDX3|10935|peroxiredoxin 3	BC059169|PRDX3|10935|peroxiredoxin 3	BC111397|PRDX3|10935|peroxiredoxin 3	CR621242|PRDX3|10935|peroxiredoxin 3	AK313169|PRDX3|10935|peroxiredoxin 3	BC008435|PRDX3|10935|peroxiredoxin 3	BC022373|PRDX3|10935|peroxiredoxin 3	CR612566|PRDX3|10935|peroxiredoxin 3	CR623202|PRDX3|10935|peroxiredoxin 3	AK130897|PRDX3|10935|peroxiredoxin 3	CR609757|PRDX3|10935|peroxiredoxin 3	CR590042|PRDX3|10935|peroxiredoxin 3	CR604854|PRDX3|10935|peroxiredoxin 3	CR614087|PRDX3|10935|peroxiredoxin 3	CR622286|PRDX3|10935|peroxiredoxin 3	CR625139|PRDX3|10935|peroxiredoxin 3	BC007062|PRDX3|10935|peroxiredoxin 3
hg18_v1_chr3_+_186529376_186529395	0.010683	LHX3,4.p2	AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr6_+_131613196_131613400	0.0105173	LHX3,4.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr11_+_106967017_106967026	0.0103998	LHX3,4.p2	AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1	NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1
hg18_v1_chr4_-_54119123_54119147	0.0103082	LHX3,4.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr2_-_165133239_165133262	0.0101878	LHX3,4.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr13_-_33148899_33148972	0.0101403	LHX3,4.p2	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr2_-_227737009_227737284	0.0101161	LHX3,4.p2	X81053|COL4A4|1286|collagen, type IV, alpha 4
hg18_v1_chr3_-_197726587_197726633	0.0100977	LHX3,4.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr2_-_95514205_95514211	0.010042	LHX3,4.p2	NM_001164464|TRIM43B|653192|tripartite motif containing 43B	BC015353|TRIM43|129868|tripartite motif containing 43
hg18_v1_chr1_-_151549790_151549817	0.0100253	LHX3,4.p2	BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3	BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3	BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3	AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3	NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3
hg18_v1_chr5_-_179431601_179431741	0.0100039	LHX3,4.p2	CR624003|RNF130|55819|ring finger protein 130	BC113864|RNF130|55819|ring finger protein 130	BC114472|RNF130|55819|ring finger protein 130	AB209800|RNF130|55819|ring finger protein 130	AY083998|RNF130|55819|ring finger protein 130	CR616243|RNF130|55819|ring finger protein 130	NM_018434|RNF130|55819|ring finger protein 130	BC108306|RNF130|55819|ring finger protein 130
hg18_v1_chr5_+_127016605_127016644	0.00988257	LHX3,4.p2	NM_001127385|CTXN3|613212|cortexin 3	AB219832|CTXN3|613212|cortexin 3	BC071790|CTXN3|613212|cortexin 3
hg18_v1_chr10_-_96819064_96819243	0.00981625	LHX3,4.p2	M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8	NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8
hg18_v1_chr12_-_51047521_51047575	0.00971166	LHX3,4.p2	X99140|KRT85|3891|keratin 85	NM_002283|KRT85|3891|keratin 85
hg18_v1_chr5_+_174084137_174084300	0.00970893	LHX3,4.p2	NM_002449|MSX2|4488|msh homeobox 2	D31771|MSX2|4488|msh homeobox 2	D89377|MSX2|4488|msh homeobox 2	S75361|MSX2|4488|msh homeobox 2	CR592938|MSX2|4488|msh homeobox 2	D26145|MSX2|4488|msh homeobox 2	BC015509|MSX2|4488|msh homeobox 2	X69295|MSX2|4488|msh homeobox 2	DQ891600|MSX2|4488|msh homeobox 2	DQ894795|MSX2|4488|msh homeobox 2	BT009814|MSX2|4488|msh homeobox 2
hg18_v1_chr3_-_95175588_95175628	0.00955756	LHX3,4.p2	BC015801|PROS1|5627|protein S (alpha)	NM_000313|PROS1|5627|protein S (alpha)
hg18_v1_chr6_+_101953581_101953671	0.00951818	LHX3,4.p2	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2
hg18_v1_chr12_-_25597444_25597483	0.00947029	LHX3,4.p2	AK093323|IFLTD1|160492|intermediate filament tail domain containing 1	NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1	BC037957|IFLTD1|160492|intermediate filament tail domain containing 1	AK310411|IFLTD1|160492|intermediate filament tail domain containing 1	AK302292|IFLTD1|160492|intermediate filament tail domain containing 1	NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1	NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1
hg18_v1_chr17_-_17081150_17081191	0.0094468	LHX3,4.p2	AF517523|FLCN|201163|folliculin	BC015687|FLCN|201163|folliculin
hg18_v1_chr8_-_33576821_33576837	0.00933227	LHX3,4.p2	BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)
hg18_v1_chr18_+_19523526_19523744	0.00910454	LHX3,4.p2	BC093406|LAMA3|3909|laminin, alpha 3	NM_001127717|LAMA3|3909|laminin, alpha 3	NM_198129|LAMA3|3909|laminin, alpha 3	AY327115|LAMA3|3909|laminin, alpha 3	AY327116|LAMA3|3909|laminin, alpha 3	AF005258|LAMA3|3909|laminin, alpha 3
hg18_v1_chr11_-_55994548_55994589	0.00886936	LHX3,4.p2	NM_001004742|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3	BC136982|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3	BC136983|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3
hg18_v1_chr2_-_227371698_227371749	0.00871625	LHX3,4.p2	EU831611|IRS1|3667|insulin receptor substrate 1	EU831698|IRS1|3667|insulin receptor substrate 1	BC053895|IRS1|3667|insulin receptor substrate 1	NM_005544|IRS1|3667|insulin receptor substrate 1
hg18_v1_chr6_-_53121540_53121585	0.00869053	LHX3,4.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg18_v1_chr4_-_69852090_69852097	0.00862693	LHX3,4.p2	BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3	NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3
hg18_v1_chr9_+_101628829_101628829	0.00862613	LHX3,4.p2	NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3
hg18_v1_chr2_+_185171537_185171564	0.00862584	LHX3,4.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr6_+_123359076_123359088	0.00861314	LHX3,4.p2	AK295158|CLVS2|134829|clavesin 2
hg18_v1_chrX_-_106130098_106130163	0.00851527	LHX3,4.p2	EF125210|MORC4|79710|MORC family CW-type zinc finger 4	NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4	NM_024657|MORC4|79710|MORC family CW-type zinc finger 4
hg18_v1_chr22_-_37044034_37044034	0.00847211	LHX3,4.p2	AB024597|CSNK1E|1454|casein kinase 1, epsilon	NM_001894|CSNK1E|1454|casein kinase 1, epsilon
hg18_v1_chr15_+_76517532_76517621	0.00836953	LHX3,4.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr1_+_209586328_209586328	0.00828327	LHX3,4.p2	BC029600|TRAF5|7188|TNF receptor-associated factor 5	NM_145759|TRAF5|7188|TNF receptor-associated factor 5
hg18_v1_chrX_+_83002809_83002825	0.00806597	LHX3,4.p2	BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1	NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1
hg18_v1_chr1_+_148532885_148532964	0.00799549	LHX3,4.p2	NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21	NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21	AK289467|MRPS21|54460|mitochondrial ribosomal protein S21	CR610321|MRPS21|54460|mitochondrial ribosomal protein S21	AB049955|MRPS21|54460|mitochondrial ribosomal protein S21	BC004566|MRPS21|54460|mitochondrial ribosomal protein S21	BC006554|MRPS21|54460|mitochondrial ribosomal protein S21	U79258|MRPS21|54460|mitochondrial ribosomal protein S21
hg18_v1_chr2_+_208839195_208839287	0.00772407	LHX3,4.p2	AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing
hg18_v1_chr1_+_50347176_50347181	0.00767321	LHX3,4.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr22_-_40172378_40172425	0.00751199	LHX3,4.p2	CR456594|TOB2|10766|transducer of ERBB2, 2
hg18_v1_chr7_+_75346201_75346354	0.00750691	LHX3,4.p2	AF226732|RHBDD2|57414|rhomboid domain containing 2	NM_001040456|RHBDD2|57414|rhomboid domain containing 2	NM_001040457|RHBDD2|57414|rhomboid domain containing 2	CR611490|RHBDD2|57414|rhomboid domain containing 2	CR590707|RHBDD2|57414|rhomboid domain containing 2	CR610119|RHBDD2|57414|rhomboid domain containing 2	CR599872|RHBDD2|57414|rhomboid domain containing 2	CR603596|RHBDD2|57414|rhomboid domain containing 2	CR624338|RHBDD2|57414|rhomboid domain containing 2	CR620747|RHBDD2|57414|rhomboid domain containing 2	BC069017|RHBDD2|57414|rhomboid domain containing 2	CR613112|RHBDD2|57414|rhomboid domain containing 2	CR602396|RHBDD2|57414|rhomboid domain containing 2	CR591432|RHBDD2|57414|rhomboid domain containing 2	CR604000|RHBDD2|57414|rhomboid domain containing 2	CR605627|RHBDD2|57414|rhomboid domain containing 2	AK026590|RHBDD2|57414|rhomboid domain containing 2	CR609399|RHBDD2|57414|rhomboid domain containing 2
hg18_v1_chr3_+_129927716_129927720	0.00747994	LHX3,4.p2	AK290721|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr1_+_184532027_184532033	0.00747295	LHX3,4.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr2_-_163403485_163403502	0.00717544	LHX3,4.p2	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg18_v1_chr3_-_49374973_49375067	0.00704705	LHX3,4.p2	BC000946|RHOA|387|ras homolog gene family, member A	CR624876|RHOA|387|ras homolog gene family, member A
hg18_v1_chr17_-_42621626_42621650	0.00702716	LHX3,4.p2	AK299342|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)
hg18_v1_chr10_-_120928327_120928347	0.00700172	LHX3,4.p2	BC021691|PRDX3|10935|peroxiredoxin 3	NM_006793|PRDX3|10935|peroxiredoxin 3	NM_014098|PRDX3|10935|peroxiredoxin 3
hg18_v1_chr8_-_146049660_146049751	0.00696476	LHX3,4.p2	NM_001081003|COMMD5|28991|COMM domain containing 5
hg18_v1_chr12_-_110410730_110410798	0.0069352	LHX3,4.p2	CR619107|ATXN2|6311|ataxin 2
hg18_v1_chrX_-_15243647_15243666	0.00690432	LHX3,4.p2	AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11	BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11	NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11	BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11
hg18_v1_chr4_-_147079410_147079426	0.00670574	LHX3,4.p2	
hg18_v1_chr2_+_61225710_61225777	0.00661479	LHX3,4.p2	NM_001143960|C2orf74|339804|chromosome 2 open reading frame 74	BC014578|C2orf74|339804|chromosome 2 open reading frame 74
hg18_v1_chr5_+_55182963_55183090	0.00639363	LHX3,4.p2	AY358740|IL31RA|133396|interleukin 31 receptor A	AK297938|IL31RA|133396|interleukin 31 receptor A	AY499342|IL31RA|133396|interleukin 31 receptor A	AY499339|IL31RA|133396|interleukin 31 receptor A	AY499340|IL31RA|133396|interleukin 31 receptor A	AY499341|IL31RA|133396|interleukin 31 receptor A	NM_139017|IL31RA|133396|interleukin 31 receptor A
hg18_v1_chr21_+_34658192_34658241	0.00626283	LHX3,4.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg18_v1_chr22_-_34566210_34566264	0.00621862	LHX3,4.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr11_-_71202538_71202571	0.00615135	LHX3,4.p2	BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene
hg18_v1_chr10_-_91393610_91393627	0.00613675	LHX3,4.p2	AF355198|PANK1|53354|pantothenate kinase 1	NM_138316|PANK1|53354|pantothenate kinase 1	NM_148978|PANK1|53354|pantothenate kinase 1	AY027662|PANK1|53354|pantothenate kinase 1	AY027663|PANK1|53354|pantothenate kinase 1
hg18_v1_chr5_+_161206774_161206864	0.00595602	LHX3,4.p2	AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr12_-_53044495_53044539	0.00581355	LHX3,4.p2	AF237762|GPR84|53831|G protein-coupled receptor 84	CR611934|GPR84|53831|G protein-coupled receptor 84	AF282693|GPR84|53831|G protein-coupled receptor 84	BC020614|GPR84|53831|G protein-coupled receptor 84	NM_020370|GPR84|53831|G protein-coupled receptor 84	AK290394|GPR84|53831|G protein-coupled receptor 84
hg18_v1_chr4_-_54119159_54119192	0.00580334	LHX3,4.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr3_-_123716454_123716470	0.00571683	LHX3,4.p2	BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)
hg18_v1_chr3_-_123716334_123716447	0.00570268	LHX3,4.p2	S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	CR620304|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)
hg18_v1_chr10_-_118887801_118887801	0.00563603	LHX3,4.p2	AK127095|VAX1|11023|ventral anterior homeobox 1	NM_001112704|VAX1|11023|ventral anterior homeobox 1	NM_199131|VAX1|11023|ventral anterior homeobox 1
hg18_v1_chr11_-_27698800_27698901	0.0055062	LHX3,4.p2	AB038671|BDNF|627|brain-derived neurotrophic factor	AY054393|BDNF|627|brain-derived neurotrophic factor	AY054394|BDNF|627|brain-derived neurotrophic factor	AY054395|BDNF|627|brain-derived neurotrophic factor	EF674517|BDNF|627|brain-derived neurotrophic factor	EF674518|BDNF|627|brain-derived neurotrophic factor	EF674519|BDNF|627|brain-derived neurotrophic factor	NM_001143805|BDNF|627|brain-derived neurotrophic factor	NM_001143806|BDNF|627|brain-derived neurotrophic factor	NM_170732|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr6_-_106880229_106880279	0.00539221	LHX3,4.p2	CR610160|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)
hg18_v1_chr2_+_201158824_201158840	0.00538352	LHX3,4.p2	AK301052|AOX1|316|aldehyde oxidase 1
hg18_v1_chr3_+_129927714_129927715	0.00533133	LHX3,4.p2	AK094449|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr17_-_39499463_39499521	0.00531879	LHX3,4.p2	AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)	AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)	CR597933|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg18_v1_chr2_+_32356492_32356576	0.00523509	LHX3,4.p2	AB072898|YIPF4|84272|Yip1 domain family, member 4	BC004875|YIPF4|84272|Yip1 domain family, member 4
hg18_v1_chr1_-_203320153_203320267	0.00519894	LHX3,4.p2	BC061592|TMEM81|388730|transmembrane protein 81	AY359081|TMEM81|388730|transmembrane protein 81	NM_203376|TMEM81|388730|transmembrane protein 81	AK303432|TMEM81|388730|transmembrane protein 81
hg18_v1_chr11_-_780103_780125	0.00504687	LHX3,4.p2	BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1	AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1	NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1
hg18_v1_chr2_+_211050653_211050677	0.00500513	LHX3,4.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr7_-_43912434_43912571	0.0049006	LHX3,4.p2	AB040940|URGCP|55665|upregulator of cell proliferation
hg18_v1_chr7_+_18515488_18515500	0.00457401	LHX3,4.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg18_v1_chr3_-_158695832_158695988	0.00456095	LHX3,4.p2	AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)
hg18_v1_chr6_-_106880222_106880228	0.00427519	LHX3,4.p2	BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)
hg18_v1_chr7_-_133652289_133652366	0.00426932	LHX3,4.p2	AB052892|SLC35B4|84912|solute carrier family 35, member B4	NM_032826|SLC35B4|84912|solute carrier family 35, member B4
hg18_v1_chr17_-_39499527_39499557	0.00414953	LHX3,4.p2	AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)	BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)
hg18_v1_chr6_+_26510443_26510560	0.00401006	LHX3,4.p2	AK291162|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_001145008|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_001145009|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_007048|BTN3A1|11119|butyrophilin, subfamily 3, member A1	NM_194441|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK290193|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK295720|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC118586|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC121800|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK299327|BTN3A1|11119|butyrophilin, subfamily 3, member A1	BC065567|BTN3A1|11119|butyrophilin, subfamily 3, member A1	U90552|BTN3A1|11119|butyrophilin, subfamily 3, member A1	AK298652|BTN3A1|11119|butyrophilin, subfamily 3, member A1	Y07827|BTN3A1|11119|butyrophilin, subfamily 3, member A1
hg18_v1_chr9_-_15240113_15240197	0.00399957	LHX3,4.p2	AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B	NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B
hg18_v1_chr6_-_106880182_106880205	0.0039076	LHX3,4.p2	CR601228|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)
hg18_v1_chr12_-_52305900_52306105	0.00389136	LHX3,4.p2	BC042363|ATF7|11016|activating transcription factor 7
hg18_v1_chr7_+_23252802_23252840	0.00356626	LHX3,4.p2	AK304671|GPNMB|10457|glycoprotein (transmembrane) nmb	NM_001005340|GPNMB|10457|glycoprotein (transmembrane) nmb	NM_002510|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr3_+_173954940_173955053	0.00331562	LHX3,4.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chr3_+_158026769_158026841	0.00327794	LHX3,4.p2	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1	AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1	BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1	NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1
hg18_v1_chr12_-_16652202_16652290	0.00306391	LHX3,4.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr10_-_27097782_27097865	0.00305838	LHX3,4.p2	AK315914|ABI1|10006|abl-interactor 1
hg18_v1_chr15_+_66133709_66133721	0.00299558	LHX3,4.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr10_-_69095362_69095443	0.00285631	LHX3,4.p2	AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3
hg18_v1_chr4_+_187385618_187385706	0.00277363	LHX3,4.p2	AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1	BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1
hg18_v1_chr11_+_55162409_55162409	0.0026559	LHX3,4.p2	NM_001004124|OR4P4|81300|olfactory receptor, family 4, subfamily P, member 4
hg18_v1_chr1_+_204710409_204710450	0.00261599	LHX3,4.p2	AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg18_v1_chr1_-_154041393_154041438	0.00246697	LHX3,4.p2	AK315191|GON4L|54856|gon-4-like (C. elegans)	BC071650|GON4L|54856|gon-4-like (C. elegans)
hg18_v1_chr14_-_49767690_49767776	0.00241915	LHX3,4.p2	L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)	BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr16_+_73739890_73739980	0.00226753	LHX3,4.p2	AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)	AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)	NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)	AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)	AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)	BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)
hg18_v1_chr11_+_86710076_86710104	0.00220244	LHX3,4.p2	AK024853|TMEM135|65084|transmembrane protein 135
hg18_v1_chr1_-_172153024_172153061	0.00216963	LHX3,4.p2	D29832|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg18_v1_chrX_+_48978923_48979039	0.00208014	LHX3,4.p2	BC000972|CCDC22|28952|coiled-coil domain containing 22	AK316375|CCDC22|28952|coiled-coil domain containing 22	AJ005890|CCDC22|28952|coiled-coil domain containing 22	DQ894170|CCDC22|28952|coiled-coil domain containing 22	EU176573|CCDC22|28952|coiled-coil domain containing 22	BC011675|CCDC22|28952|coiled-coil domain containing 22
hg18_v1_chr1_-_89129769_89129830	0.00198849	LHX3,4.p2	AB451296|GTF2B|2959|general transcription factor IIB	EU446894|GTF2B|2959|general transcription factor IIB	CR592227|GTF2B|2959|general transcription factor IIB	M76766|GTF2B|2959|general transcription factor IIB	CR619060|GTF2B|2959|general transcription factor IIB	CR600115|GTF2B|2959|general transcription factor IIB
hg18_v1_chr10_-_90601655_90601711	0.00197737	LHX3,4.p2	NM_144590|ANKRD22|118932|ankyrin repeat domain 22
hg18_v1_chr9_+_6710862_6710862	0.00182763	LHX3,4.p2	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C	NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C
hg18_v1_chr6_+_32003380_32003526	0.001826	LHX3,4.p2	AK312581|C2|717|complement component 2	BC029781|C2|717|complement component 2	AK300892|C2|717|complement component 2	X04481|C2|717|complement component 2	AK307930|C2|717|complement component 2	AK222537|C2|717|complement component 2	AK300930|C2|717|complement component 2	BC043484|C2|717|complement component 2	AK222783|C2|717|complement component 2	CR620914|C2|717|complement component 2
hg18_v1_chr1_+_201862552_201862612	0.00174308	LHX3,4.p2	CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4
hg18_v1_chr17_-_17081217_17081254	0.0015999	LHX3,4.p2	AK309336|FLCN|201163|folliculin	AK127912|FLCN|201163|folliculin	NM_144606|FLCN|201163|folliculin	NM_144997|FLCN|201163|folliculin
hg18_v1_chr10_-_21826211_21826252	0.00150519	LHX3,4.p2	NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114
hg18_v1_chr8_-_17986690_17986787	0.00139676	LHX3,4.p2	AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1	NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1
hg18_v1_chr20_+_55338221_55338297	0.00134761	LHX3,4.p2	AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)
hg18_v1_chr7_-_36730525_36730678	0.00117875	LHX3,4.p2	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)	BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)	AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)	NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)
hg18_v1_chr12_-_6626794_6626856	0.00116483	LHX3,4.p2	DQ890872|ACRBP|84519|acrosin binding protein	DQ894028|ACRBP|84519|acrosin binding protein	AK302290|ACRBP|84519|acrosin binding protein	AK311572|ACRBP|84519|acrosin binding protein	BC033010|ACRBP|84519|acrosin binding protein	AB051833|ACRBP|84519|acrosin binding protein	NM_032489|ACRBP|84519|acrosin binding protein
hg18_v1_chr2_+_68815416_68815738	0.00115219	LHX3,4.p2	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25	NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25	AK297056|ARHGAP25|9938|Rho GTPase activating protein 25	AK310742|ARHGAP25|9938|Rho GTPase activating protein 25	AK290396|ARHGAP25|9938|Rho GTPase activating protein 25
hg18_v1_chr1_+_246682699_246682721	0.00104709	LHX3,4.p2	BC136961|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2	BC136962|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2	NM_001004136|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2
hg18_v1_chr22_+_45109961_45109985	0.000942327	LHX3,4.p2	CR617888|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg18_v1_chr2_+_187162969_187163181	0.000907115	LHX3,4.p2	AK302550|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AK309711|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_001145000|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	NM_002210|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	AB209894|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC126231|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC136442|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	BC144100|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr6_+_28335070_28335123	0.000658191	LHX3,4.p2	NM_001007531|NKAPL|222698|NFKB activating protein-like	BC101681|NKAPL|222698|NFKB activating protein-like	BC101685|NKAPL|222698|NFKB activating protein-like	BC038240|NKAPL|222698|NFKB activating protein-like
hg18_v1_chr10_+_112826774_112826910	0.000555732	LHX3,4.p2	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor	AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor
hg18_v1_chr3_+_181803649_181803666	0.00046421	LHX3,4.p2	AB075860|TTC14|151613|tetratricopeptide repeat domain 14
hg18_v1_chr2_-_37269193_37269193	0.000446065	LHX3,4.p2	BC140797|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1	BC144573|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1	BC144574|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1	NM_001032377|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1
hg18_v1_chr14_-_35347791_35348006	0.000438962	LHX3,4.p2	AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg18_v1_chr6_-_10939095_10939097	0.000381988	LHX3,4.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chr17_-_64568641_64568730	0.000363298	LHX3,4.p2	BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9	NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9
hg18_v1_chr1_+_50347188_50347355	0.000347956	LHX3,4.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR613627|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr2_-_55413253_55413327	0.000312636	LHX3,4.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chrX_+_90977115_90977159	0.000309609	LHX3,4.p2	AJ564931|PCDH11X|27328|protocadherin 11 X-linked	NM_001168360|PCDH11X|27328|protocadherin 11 X-linked	NM_001168361|PCDH11X|27328|protocadherin 11 X-linked	NM_001168362|PCDH11X|27328|protocadherin 11 X-linked	NM_001168363|PCDH11X|27328|protocadherin 11 X-linked	AF206516|PCDH11X|27328|protocadherin 11 X-linked	AF217288|PCDH11X|27328|protocadherin 11 X-linked	AY861432|PCDH11X|27328|protocadherin 11 X-linked	AY861433|PCDH11X|27328|protocadherin 11 X-linked	AY861434|PCDH11X|27328|protocadherin 11 X-linked	AY861435|PCDH11X|27328|protocadherin 11 X-linked
hg18_v1_chr5_-_88215034_88215049	0.000299351	LHX3,4.p2	NM_001193350|MEF2C|4208|myocyte enhancer factor 2C	NM_002397|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr5_-_119768430_119768468	0.000289623	LHX3,4.p2	
hg18_v1_chr1_-_42738535_42738675	0.000284743	LHX3,4.p2	BC101199|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1	BC101200|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1
hg18_v1_chr22_+_27498679_27498720	0.000263529	LHX3,4.p2	BC065549|CCDC117|150275|coiled-coil domain containing 117	BC053874|CCDC117|150275|coiled-coil domain containing 117	BC040488|CCDC117|150275|coiled-coil domain containing 117	AK302925|CCDC117|150275|coiled-coil domain containing 117
hg18_v1_chr14_+_51025604_51025604	9.37432e-05	LHX3,4.p2	AL833158|FRMD6|122786|FERM domain containing 6	NM_001042481|FRMD6|122786|FERM domain containing 6
hg18_v1_chr10_-_52315390_52315408	7.01997e-05	LHX3,4.p2	BC022263|A1CF|29974|APOBEC1 complementation factor	AF209192|A1CF|29974|APOBEC1 complementation factor	AK291982|A1CF|29974|APOBEC1 complementation factor	AK303801|A1CF|29974|APOBEC1 complementation factor
hg18_v1_chr4_-_54119102_54119112	2.77516e-05	LHX3,4.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
