hg18_v1_chr2_-_21087435_21087487	1.77056	SOX2.p2	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr2_-_21084077_21084207	1.33094	SOX2.p2	X03045|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr3_-_192531018_192531018	1.31363	SOX2.p2	AK090630|UTS2D|257313|urotensin 2 domain containing	NM_198152|UTS2D|257313|urotensin 2 domain containing
hg18_v1_chr20_+_11846536_11846579	1.30111	SOX2.p2	AK316256|BTBD3|22903|BTB (POZ) domain containing 3	NM_014962|BTBD3|22903|BTB (POZ) domain containing 3	AB023169|BTBD3|22903|BTB (POZ) domain containing 3	BC109315|BTBD3|22903|BTB (POZ) domain containing 3	BC109316|BTBD3|22903|BTB (POZ) domain containing 3
hg18_v1_chr5_+_147754467_147754532	1.28417	SOX2.p2	BC050424|FBXO38|81545|F-box protein 38
hg18_v1_chr2_+_152900076_152900362	1.14665	SOX2.p2	BC113878|FMNL2|114793|formin-like 2	BC114438|FMNL2|114793|formin-like 2	AB067489|FMNL2|114793|formin-like 2	BC167159|FMNL2|114793|formin-like 2
hg18_v1_chr17_+_63252704_63252719	1.14075	SOX2.p2	AY282495|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr20_+_2892918_2892935	1.0901	SOX2.p2	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A
hg18_v1_chr16_+_21518633_21518678	1.06479	SOX2.p2	AF151839|METTL9|51108|methyltransferase like 9
hg18_v1_chr3_+_142587973_142587983	1.03702	SOX2.p2	
hg18_v1_chr2_+_62787534_62787535	0.992207	SOX2.p2	BC029477|EHBP1|23301|EH domain binding protein 1	NM_001142614|EHBP1|23301|EH domain binding protein 1
hg18_v1_chr2_+_203207912_203207957	0.979531	SOX2.p2	AK096090|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr17_+_63252668_63252691	0.953459	SOX2.p2	AK293224|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr4_+_146623405_146623412	0.938108	SOX2.p2	U59912|SMAD1|4086|SMAD family member 1	NM_001003688|SMAD1|4086|SMAD family member 1	U54826|SMAD1|4086|SMAD family member 1	AK293055|SMAD1|4086|SMAD family member 1
hg18_v1_chr1_+_61320213_61321079	0.917961	SOX2.p2	AB037860|NFIA|4774|nuclear factor I/A	NM_001134673|NFIA|4774|nuclear factor I/A	NM_005595|NFIA|4774|nuclear factor I/A	AK299356|NFIA|4774|nuclear factor I/A	BC022264|NFIA|4774|nuclear factor I/A	DQ893250|NFIA|4774|nuclear factor I/A	DQ896579|NFIA|4774|nuclear factor I/A
hg18_v1_chr1_+_61319976_61320121	0.904838	SOX2.p2	AK299579|NFIA|4774|nuclear factor I/A	NM_001145512|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_+_122762449_122762581	0.89675	SOX2.p2	AK225593|HSF2|3298|heat shock transcription factor 2	AK225594|HSF2|3298|heat shock transcription factor 2	BC112323|HSF2|3298|heat shock transcription factor 2	M65217|HSF2|3298|heat shock transcription factor 2	AK294624|HSF2|3298|heat shock transcription factor 2	BC005329|HSF2|3298|heat shock transcription factor 2	CR604546|HSF2|3298|heat shock transcription factor 2	BC064622|HSF2|3298|heat shock transcription factor 2	BC121050|HSF2|3298|heat shock transcription factor 2	BC121051|HSF2|3298|heat shock transcription factor 2	BC128420|HSF2|3298|heat shock transcription factor 2	AK316377|HSF2|3298|heat shock transcription factor 2	EU446897|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr2_+_101680594_101680974	0.894817	SOX2.p2	BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chrX_+_86659370_86659552	0.882988	SOX2.p2	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)	NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)	AK056457|KLHL4|56062|kelch-like 4 (Drosophila)	AB051474|KLHL4|56062|kelch-like 4 (Drosophila)	BC161675|KLHL4|56062|kelch-like 4 (Drosophila)	AL832514|KLHL4|56062|kelch-like 4 (Drosophila)	AF284765|KLHL4|56062|kelch-like 4 (Drosophila)	AF284766|KLHL4|56062|kelch-like 4 (Drosophila)	BC140839|KLHL4|56062|kelch-like 4 (Drosophila)	BC140840|KLHL4|56062|kelch-like 4 (Drosophila)	BC142652|KLHL4|56062|kelch-like 4 (Drosophila)	BC146677|KLHL4|56062|kelch-like 4 (Drosophila)
hg18_v1_chr2_+_120233676_120234064	0.861933	SOX2.p2	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg18_v1_chr4_-_101658094_101658272	0.853491	SOX2.p2	AB034695|EMCN|51705|endomucin	AK222741|EMCN|51705|endomucin	AK304568|EMCN|51705|endomucin	AK291831|EMCN|51705|endomucin	BC017781|EMCN|51705|endomucin	AF205940|EMCN|51705|endomucin	AK026875|EMCN|51705|endomucin	AK313504|EMCN|51705|endomucin	NM_001159694|EMCN|51705|endomucin	NM_016242|EMCN|51705|endomucin
hg18_v1_chr2_-_174475528_174475673	0.816404	SOX2.p2	
hg18_v1_chr4_+_110968594_110968607	0.801538	SOX2.p2	AF012270|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog
hg18_v1_chr14_+_31868229_31868346	0.789962	SOX2.p2	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6	U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6	AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6	BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6
hg18_v1_chr6_-_127882192_127882192	0.78409	SOX2.p2	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174
hg18_v1_chr6_+_122762384_122762405	0.768114	SOX2.p2	NM_001135564|HSF2|3298|heat shock transcription factor 2	NM_004506|HSF2|3298|heat shock transcription factor 2
hg18_v1_chr13_+_23042722_23042918	0.75243	SOX2.p2	BC047321|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	AK304290|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	AK292874|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19
hg18_v1_chr10_+_49184658_49184926	0.738747	SOX2.p2	CR614448|MAPK8|5599|mitogen-activated protein kinase 8	AK292523|MAPK8|5599|mitogen-activated protein kinase 8
hg18_v1_chr8_+_21833162_21833227	0.734059	SOX2.p2	AK291472|XPO7|23039|exportin 7	AB018288|XPO7|23039|exportin 7	AF064729|XPO7|23039|exportin 7
hg18_v1_chr4_+_113372287_113372780	0.722047	SOX2.p2	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein	EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein
hg18_v1_chr6_+_64414389_64414414	0.721544	SOX2.p2	AF091622|PHF3|23469|PHD finger protein 3	BC113650|PHF3|23469|PHD finger protein 3	BC113652|PHF3|23469|PHD finger protein 3	NM_015153|PHF3|23469|PHD finger protein 3	D87685|PHF3|23469|PHD finger protein 3
hg18_v1_chr9_+_90193058_90193248	0.702773	SOX2.p2	NM_006717|SPIN1|10927|spindlin 1	BC013571|SPIN1|10927|spindlin 1	AL136719|SPIN1|10927|spindlin 1	AK092017|SPIN1|10927|spindlin 1	AF087864|SPIN1|10927|spindlin 1	AF106682|SPIN1|10927|spindlin 1	AK290009|SPIN1|10927|spindlin 1
hg18_v1_chr3_+_186563529_186563723	0.698021	SOX2.p2	AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13
hg18_v1_chr10_-_11614279_11614279	0.696258	SOX2.p2	NM_001080491|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr14_-_30927931_30927931	0.686474	SOX2.p2	BC045764|HEATR5A|25938|HEAT repeat containing 5A	NM_015473|HEATR5A|25938|HEAT repeat containing 5A
hg18_v1_chr2_+_169021039_169021204	0.670635	SOX2.p2	NM_203463|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109284|LASS6|253782|LAG1 homolog, ceramide synthase 6	BC109285|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr18_+_3441589_3441674	0.670541	SOX2.p2	NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1	BC031268|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr2_+_181554048_181554097	0.670227	SOX2.p2	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr9_-_85773899_85773933	0.669913	SOX2.p2	BC013220|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K
hg18_v1_chr10_-_61570665_61570779	0.665698	SOX2.p2	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr9_+_114289178_114289289	0.664387	SOX2.p2	BC105048|KIAA1958|158405|KIAA1958	BC113515|KIAA1958|158405|KIAA1958	BC143372|KIAA1958|158405|KIAA1958	BC143424|KIAA1958|158405|KIAA1958
hg18_v1_chr2_-_63518589_63518644	0.661751	SOX2.p2	BC093752|WDPCP|51057|WD repeat containing planar cell polarity effector	BC093754|WDPCP|51057|WD repeat containing planar cell polarity effector	BC143426|WDPCP|51057|WD repeat containing planar cell polarity effector	NM_001042692|WDPCP|51057|WD repeat containing planar cell polarity effector	AF131737|WDPCP|51057|WD repeat containing planar cell polarity effector
hg18_v1_chr10_+_114699953_114700631	0.62157	SOX2.p2	AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)	BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg18_v1_chr9_+_112470871_112471004	0.620626	SOX2.p2	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase	GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase
hg18_v1_chr7_+_94135384_94135392	0.61961	SOX2.p2	AF038197|PEG10|23089|paternally expressed 10
hg18_v1_chr16_+_55373241_55373268	0.612444	SOX2.p2	AK056637|NUP93|9688|nucleoporin 93kDa
hg18_v1_chr1_+_90233238_90233371	0.610969	SOX2.p2	NM_182975|ZNF326|284695|zinc finger protein 326	NM_182976|ZNF326|284695|zinc finger protein 326	BC052645|ZNF326|284695|zinc finger protein 326	BC061521|ZNF326|284695|zinc finger protein 326	BC038454|ZNF326|284695|zinc finger protein 326	BC090866|ZNF326|284695|zinc finger protein 326	AK000410|ZNF326|284695|zinc finger protein 326	BC053888|ZNF326|284695|zinc finger protein 326	BC014899|ZNF326|284695|zinc finger protein 326	BC070341|ZNF326|284695|zinc finger protein 326	BC013102|ZNF326|284695|zinc finger protein 326	AK303707|ZNF326|284695|zinc finger protein 326	AK297073|ZNF326|284695|zinc finger protein 326
hg18_v1_chr6_+_144649142_144649204	0.610358	SOX2.p2	AK292506|UTRN|7402|utrophin
hg18_v1_chr8_+_21833111_21833160	0.599469	SOX2.p2	NM_015024|XPO7|23039|exportin 7	BC030785|XPO7|23039|exportin 7
hg18_v1_chr15_+_47502666_47502771	0.599421	SOX2.p2	NM_002009|FGF7|2252|fibroblast growth factor 7	BC010956|FGF7|2252|fibroblast growth factor 7	AK313160|FGF7|2252|fibroblast growth factor 7	M60828|FGF7|2252|fibroblast growth factor 7	S81661|FGF7|2252|fibroblast growth factor 7	CR617541|FGF7|2252|fibroblast growth factor 7	CR609737|FGF7|2252|fibroblast growth factor 7
hg18_v1_chr6_-_128263868_128263918	0.595794	SOX2.p2	AK292046|THEMIS|387357|thymocyte selection associated	AK097903|THEMIS|387357|thymocyte selection associated	BC144034|THEMIS|387357|thymocyte selection associated	BC130516|THEMIS|387357|thymocyte selection associated	NM_001010923|THEMIS|387357|thymocyte selection associated	NM_001164685|THEMIS|387357|thymocyte selection associated
hg18_v1_chr6_-_50045296_50045296	0.586961	SOX2.p2	DQ012017|DEFB113|245927|defensin, beta 113	NM_001037729|DEFB113|245927|defensin, beta 113
hg18_v1_chr17_+_55269974_55270203	0.57841	SOX2.p2	
hg18_v1_chr13_-_40491491_40491507	0.570822	SOX2.p2	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr15_+_50098724_50098728	0.568721	SOX2.p2	CR749401|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr15_+_50098700_50098723	0.560135	SOX2.p2	NM_002748|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr4_+_115762971_115762971	0.557848	SOX2.p2	NM_003360|UGT8|7368|UDP glycosyltransferase 8	U30930|UGT8|7368|UDP glycosyltransferase 8
hg18_v1_chr8_+_81560971_81561107	0.5573	SOX2.p2	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10	NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10	BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10	BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10
hg18_v1_chr9_+_71009746_71009897	0.539324	SOX2.p2	NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)	AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)	NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)
hg18_v1_chr2_-_37752272_37752294	0.537347	SOX2.p2	AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr13_-_98428244_98428338	0.536262	SOX2.p2	AB028981|DOCK9|23348|dedicator of cytokinesis 9	CR936820|DOCK9|23348|dedicator of cytokinesis 9	AK126492|DOCK9|23348|dedicator of cytokinesis 9	NM_001130048|DOCK9|23348|dedicator of cytokinesis 9	NM_001130050|DOCK9|23348|dedicator of cytokinesis 9
hg18_v1_chr12_-_10464308_10464460	0.532589	SOX2.p2	AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3
hg18_v1_chr7_+_16759845_16760117	0.527738	SOX2.p2	AK093487|TSPAN13|27075|tetraspanin 13	NM_014399|TSPAN13|27075|tetraspanin 13	AK026587|TSPAN13|27075|tetraspanin 13	AK075475|TSPAN13|27075|tetraspanin 13	AK316595|TSPAN13|27075|tetraspanin 13	CR600961|TSPAN13|27075|tetraspanin 13	CR597593|TSPAN13|27075|tetraspanin 13	CR612419|TSPAN13|27075|tetraspanin 13	CR598448|TSPAN13|27075|tetraspanin 13	CR598804|TSPAN13|27075|tetraspanin 13	AY358995|TSPAN13|27075|tetraspanin 13	CR591620|TSPAN13|27075|tetraspanin 13	CR602288|TSPAN13|27075|tetraspanin 13	CR612760|TSPAN13|27075|tetraspanin 13	CR612597|TSPAN13|27075|tetraspanin 13	AF100759|TSPAN13|27075|tetraspanin 13	BC033863|TSPAN13|27075|tetraspanin 13	AF120265|TSPAN13|27075|tetraspanin 13	DQ892059|TSPAN13|27075|tetraspanin 13	DQ895252|TSPAN13|27075|tetraspanin 13	CR542107|TSPAN13|27075|tetraspanin 13
hg18_v1_chr5_+_36912656_36912999	0.526597	SOX2.p2	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)	BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)	BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)	AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)	BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chrX_+_123062143_123062279	0.525627	SOX2.p2	AK026678|STAG2|10735|stromal antigen 2
hg18_v1_chrX_+_44617346_44617414	0.523562	SOX2.p2	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A	AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A
hg18_v1_chr1_+_183281173_183281321	0.521888	SOX2.p2	NM_007212|RNF2|6045|ring finger protein 2	AF141327|RNF2|6045|ring finger protein 2	CR597914|RNF2|6045|ring finger protein 2	AK091574|RNF2|6045|ring finger protein 2	BC012583|RNF2|6045|ring finger protein 2	AK314793|RNF2|6045|ring finger protein 2
hg18_v1_chr1_+_198975227_198975361	0.519321	SOX2.p2	AK095640|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1	NM_203459|CAMSAP1L1|23271|calmodulin regulated spectrin-associated protein 1-like 1
hg18_v1_chr6_-_128883125_128883574	0.516663	SOX2.p2	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K
hg18_v1_chr12_-_65359019_65359028	0.513075	SOX2.p2	BC115393|GRIP1|23426|glutamate receptor interacting protein 1	BC115394|GRIP1|23426|glutamate receptor interacting protein 1	AK307576|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr12_-_11041740_11041740	0.512297	SOX2.p2	BC100915|TAS2R20|259295|taste receptor, type 2, member 20	BC100916|TAS2R20|259295|taste receptor, type 2, member 20	BC100917|TAS2R20|259295|taste receptor, type 2, member 20	BC100918|TAS2R20|259295|taste receptor, type 2, member 20	BC113843|TAS2R20|259295|taste receptor, type 2, member 20	BC114451|TAS2R20|259295|taste receptor, type 2, member 20	NM_176889|TAS2R20|259295|taste receptor, type 2, member 20
hg18_v1_chr3_+_153469421_153469444	0.508261	SOX2.p2	BC050535|MBNL1|4154|muscleblind-like (Drosophila)	BC043493|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chrX_+_84385693_84385791	0.50808	SOX2.p2	BC006349|ZNF711|7552|zinc finger protein 711	AK308097|ZNF711|7552|zinc finger protein 711
hg18_v1_chr6_+_157141565_157141570	0.498894	SOX2.p2	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)
hg18_v1_chr2_+_198377561_198377670	0.497254	SOX2.p2	AK127514|PLCL1|5334|phospholipase C-like 1	NM_006226|PLCL1|5334|phospholipase C-like 1
hg18_v1_chr14_+_22059174_22059204	0.496174	SOX2.p2	
hg18_v1_chr15_+_50098730_50098776	0.496033	SOX2.p2	BC035492|MAPK6|5597|mitogen-activated protein kinase 6
hg18_v1_chr4_+_166350620_166350637	0.490503	SOX2.p2	NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)
hg18_v1_chr2_+_46779827_46779983	0.485134	SOX2.p2	BC032862|SOCS5|9655|suppressor of cytokine signaling 5	AF073958|SOCS5|9655|suppressor of cytokine signaling 5	NM_144949|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr15_-_23204887_23204952	0.482622	SOX2.p2	AB194232|UBE3A|7337|ubiquitin protein ligase E3A	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A	X98031|UBE3A|7337|ubiquitin protein ligase E3A	AF002225|UBE3A|7337|ubiquitin protein ligase E3A
hg18_v1_chr2_+_166137091_166137100	0.480976	SOX2.p2	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr17_+_50333021_50333289	0.480943	SOX2.p2	NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1	AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1	AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1	AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1	AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1	AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1	AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1	AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1	AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1	BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1	CR610033|TOM1L1|10040|target of myb1 (chicken)-like 1	CR593166|TOM1L1|10040|target of myb1 (chicken)-like 1
hg18_v1_chr7_-_11838260_11838369	0.478746	SOX2.p2	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A	NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A
hg18_v1_chr17_-_53420473_53420593	0.476668	SOX2.p2	D28118|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr2_-_156897286_156897532	0.473954	SOX2.p2	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2
hg18_v1_chr2_+_203208064_203208145	0.473561	SOX2.p2	NM_173511|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr2_-_55413253_55413327	0.47181	SOX2.p2	BC056885|CCDC88A|55704|coiled-coil domain containing 88A
hg18_v1_chr2_+_36436873_36436939	0.468439	SOX2.p2	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg18_v1_chr6_+_144654565_144654657	0.466814	SOX2.p2	NM_007124|UTRN|7402|utrophin	X69086|UTRN|7402|utrophin
hg18_v1_chr6_+_64340408_64340597	0.46489	SOX2.p2	BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	CR602427|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr7_-_26202626_26202771	0.463694	SOX2.p2	CR613897|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr5_+_138705445_138705467	0.462443	SOX2.p2	AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2	AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2	BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2	CR592408|PAIP2|51247|poly(A) binding protein interacting protein 2	AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2	CR611769|PAIP2|51247|poly(A) binding protein interacting protein 2	CR626771|PAIP2|51247|poly(A) binding protein interacting protein 2	CR600873|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr16_-_69876262_69876360	0.461398	SOX2.p2	AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1
hg18_v1_chr7_+_106897737_106897740	0.460623	SOX2.p2	NM_005295|GPR22|2845|G protein-coupled receptor 22	AK122621|GPR22|2845|G protein-coupled receptor 22	AK307393|GPR22|2845|G protein-coupled receptor 22
hg18_v1_chr20_-_33705244_33705244	0.458551	SOX2.p2	NM_003915|CPNE1|8904|copine I
hg18_v1_chr12_-_65359148_65359191	0.456595	SOX2.p2	AK095519|GRIP1|23426|glutamate receptor interacting protein 1	NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1	NM_021150|GRIP1|23426|glutamate receptor interacting protein 1
hg18_v1_chr3_-_150993299_150993299	0.455199	SOX2.p2	BC171805|C3orf16|389161|chromosome 3 open reading frame 16	NM_001144960|C3orf16|389161|chromosome 3 open reading frame 16
hg18_v1_chr4_+_39376058_39376341	0.454834	SOX2.p2	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	CR606205|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)
hg18_v1_chr21_+_29593607_29593607	0.454082	SOX2.p2	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg18_v1_chr20_-_48980858_48981403	0.452743	SOX2.p2	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox	NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox	NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox	BC075794|ADNP|23394|activity-dependent neuroprotector homeobox
hg18_v1_chr4_+_35959638_35959645	0.452662	SOX2.p2	AK131492|DTHD1|401124|death domain containing 1	NM_001136536|DTHD1|401124|death domain containing 1	AK304357|DTHD1|401124|death domain containing 1	AK316523|DTHD1|401124|death domain containing 1
hg18_v1_chr5_+_138705469_138705516	0.451732	SOX2.p2	CR593605|PAIP2|51247|poly(A) binding protein interacting protein 2	AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr6_+_64340388_64340401	0.450305	SOX2.p2	AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr2_-_55053398_55053426	0.44821	SOX2.p2	
hg18_v1_chr8_+_110415725_110415813	0.447763	SOX2.p2	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)
hg18_v1_chr4_+_144654005_144654352	0.443423	SOX2.p2	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg18_v1_chr5_-_44424423_44424622	0.443133	SOX2.p2	AF508782|FGF10|2255|fibroblast growth factor 10	AB002097|FGF10|2255|fibroblast growth factor 10	AF411527|FGF10|2255|fibroblast growth factor 10	BC069561|FGF10|2255|fibroblast growth factor 10	CR541665|FGF10|2255|fibroblast growth factor 10	CR541688|FGF10|2255|fibroblast growth factor 10	GQ351295|FGF10|2255|fibroblast growth factor 10	NM_004465|FGF10|2255|fibroblast growth factor 10	U67918|FGF10|2255|fibroblast growth factor 10	BC105023|FGF10|2255|fibroblast growth factor 10	BC105021|FGF10|2255|fibroblast growth factor 10
hg18_v1_chr1_-_151296611_151296611	0.442986	SOX2.p2	AK311939|SPRR2A|6700|small proline-rich protein 2A	NM_005988|SPRR2A|6700|small proline-rich protein 2A
hg18_v1_chr17_+_36642240_36642277	0.440766	SOX2.p2	AJ406947|KRTAP9-3|83900|keratin associated protein 9-3	NM_031962|KRTAP9-3|83900|keratin associated protein 9-3	BC074918|KRTAP9-3|83900|keratin associated protein 9-3	BC074919|KRTAP9-3|83900|keratin associated protein 9-3	AJ406951|KRTAP9-9|81870|keratin associated protein 9-9
hg18_v1_chr1_-_52293634_52293634	0.436751	SOX2.p2	AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr2_-_188021117_188021265	0.434091	SOX2.p2	DQ280491|CALCRL|10203|calcitonin receptor-like	U17473|CALCRL|10203|calcitonin receptor-like	L76380|CALCRL|10203|calcitonin receptor-like	AK291630|CALCRL|10203|calcitonin receptor-like	AK292998|CALCRL|10203|calcitonin receptor-like	NM_005795|CALCRL|10203|calcitonin receptor-like
hg18_v1_chr8_-_110415448_110415646	0.43372	SOX2.p2	AK301278|NUDCD1|84955|NudC domain containing 1	BC000967|NUDCD1|84955|NudC domain containing 1	AK027897|NUDCD1|84955|NudC domain containing 1	BC043406|NUDCD1|84955|NudC domain containing 1	AK315006|NUDCD1|84955|NudC domain containing 1	CR603601|NUDCD1|84955|NudC domain containing 1	BC031258|NUDCD1|84955|NudC domain containing 1	NM_032869|NUDCD1|84955|NudC domain containing 1	AF283301|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr7_+_116099648_116099768	0.433632	SOX2.p2	J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)
hg18_v1_chr15_+_21361546_21361546	0.432841	SOX2.p2	NM_005664|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr2_-_36929520_36929549	0.430641	SOX2.p2	BC015406|STRN|6801|striatin, calmodulin binding protein
hg18_v1_chr2_+_114935623_114935649	0.427783	SOX2.p2	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)
hg18_v1_chr6_+_57062974_57063009	0.426861	SOX2.p2	EU832452|ZNF451|26036|zinc finger protein 451	EU832534|ZNF451|26036|zinc finger protein 451
hg18_v1_chr17_-_53420595_53420639	0.426832	SOX2.p2	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1
hg18_v1_chr5_+_102493155_102493192	0.426417	SOX2.p2	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2
hg18_v1_chr10_+_92970302_92970474	0.425491	SOX2.p2	NM_032373|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr1_-_95165037_95165086	0.424481	SOX2.p2	CR541848|CNN3|1266|calponin 3, acidic	DQ893013|CNN3|1266|calponin 3, acidic	DQ896258|CNN3|1266|calponin 3, acidic
hg18_v1_chr9_+_18464090_18464103	0.420698	SOX2.p2	AK290667|ADAMTSL1|92949|ADAMTS-like 1	AY358327|ADAMTSL1|92949|ADAMTS-like 1	NM_001040272|ADAMTSL1|92949|ADAMTS-like 1	NM_052866|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr3_-_121065112_121065117	0.419216	SOX2.p2	
hg18_v1_chr6_-_33028790_33028876	0.418357	SOX2.p2	CR450324|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ892839|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	DQ896086|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC026279|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	AK291858|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	X62744|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	BC011447|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha	NM_006120|HLA-DMA|3108|major histocompatibility complex, class II, DM alpha
hg18_v1_chr4_+_144654526_144654603	0.417827	SOX2.p2	
hg18_v1_chr2_+_54537842_54537901	0.41723	SOX2.p2	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr2_+_187163232_187163312	0.416547	SOX2.p2	EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)
hg18_v1_chr20_+_30831298_30831318	0.415956	SOX2.p2	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta	NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta
hg18_v1_chr12_-_23995220_23995237	0.415356	SOX2.p2	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5	AK303970|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr12_-_23995109_23995133	0.414914	SOX2.p2	AK299607|SOX5|6660|SRY (sex determining region Y)-box 5	AK096569|SOX5|6660|SRY (sex determining region Y)-box 5
hg18_v1_chr14_-_22521544_22521687	0.414792	SOX2.p2	BC034968|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_032876|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr1_-_95165089_95165368	0.414471	SOX2.p2	S80562|CNN3|1266|calponin 3, acidic	BC025372|CNN3|1266|calponin 3, acidic	AK312370|CNN3|1266|calponin 3, acidic	CR622382|CNN3|1266|calponin 3, acidic	AK298145|CNN3|1266|calponin 3, acidic	NM_001839|CNN3|1266|calponin 3, acidic
hg18_v1_chr2_-_21081694_21081813	0.413625	SOX2.p2	X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr14_+_34831355_34831433	0.413248	SOX2.p2	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR593415|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6	CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6
hg18_v1_chr10_+_111959978_111959978	0.409026	SOX2.p2	BC012907|MXI1|4601|MAX interactor 1	NM_001008541|MXI1|4601|MAX interactor 1
hg18_v1_chr2_+_201385019_201385152	0.405227	SOX2.p2	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr2_+_11600238_11600266	0.404917	SOX2.p2	BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr5_+_10406980_10407037	0.404835	SOX2.p2	
hg18_v1_chr15_+_22751162_22751284	0.404013	SOX2.p2	NM_022804|SNURF|8926|SNRPN upstream reading frame	NM_003097|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	NM_005678|SNURF|8926|SNRPN upstream reading frame	U41303|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF101044|SNURF|8926|SNRPN upstream reading frame	AK098563|SNURF|8926|SNRPN upstream reading frame	J04615|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR591152|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC018809|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC003180|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR604539|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593721|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR594630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR595630|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599234|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR593346|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	CR599902|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	BC025178|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319522|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	AF319523|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N
hg18_v1_chr5_+_161427225_161427621	0.402603	SOX2.p2	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2	AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg18_v1_chr20_-_45410033_45410076	0.401591	SOX2.p2	DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8	DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr2_+_138438277_138438531	0.400614	SOX2.p2	NM_001024074|HNMT|3176|histamine N-methyltransferase	NM_001024075|HNMT|3176|histamine N-methyltransferase	NM_006895|HNMT|3176|histamine N-methyltransferase	AF523356|HNMT|3176|histamine N-methyltransferase	AF523357|HNMT|3176|histamine N-methyltransferase	AF523358|HNMT|3176|histamine N-methyltransferase	AF523359|HNMT|3176|histamine N-methyltransferase	AF523360|HNMT|3176|histamine N-methyltransferase	U08092|HNMT|3176|histamine N-methyltransferase	BC005907|HNMT|3176|histamine N-methyltransferase	AK301462|HNMT|3176|histamine N-methyltransferase	AK313804|HNMT|3176|histamine N-methyltransferase	BC020677|HNMT|3176|histamine N-methyltransferase	D16224|HNMT|3176|histamine N-methyltransferase	DQ891166|HNMT|3176|histamine N-methyltransferase	DQ894348|HNMT|3176|histamine N-methyltransferase
hg18_v1_chr2_+_108751033_108751198	0.400602	SOX2.p2	AY170822|RANBP2|5903|RAN binding protein 2
hg18_v1_chr3_+_112743615_112743697	0.397515	SOX2.p2	NM_005816|CD96|10225|CD96 molecule	NM_198196|CD96|10225|CD96 molecule	BC020749|CD96|10225|CD96 molecule	BC027914|CD96|10225|CD96 molecule
hg18_v1_chr8_-_17624009_17624009	0.397229	SOX2.p2	AK125188|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr6_+_89847183_89847332	0.395718	SOX2.p2	AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR608318|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR593282|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR624105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR590801|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR605107|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR603217|PNRC1|10957|proline-rich nuclear receptor coactivator 1	U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR617909|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR595339|PNRC1|10957|proline-rich nuclear receptor coactivator 1	CR602604|PNRC1|10957|proline-rich nuclear receptor coactivator 1	BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1	AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr5_-_160211623_160211796	0.394189	SOX2.p2	AB018258|ATP10B|23120|ATPase, class V, type 10B	AK295081|ATP10B|23120|ATPase, class V, type 10B	AK090832|ATP10B|23120|ATPase, class V, type 10B	NM_025153|ATP10B|23120|ATPase, class V, type 10B
hg18_v1_chr12_-_97812633_97812777	0.392492	SOX2.p2	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr4_+_146622154_146622511	0.390164	SOX2.p2	U59423|SMAD1|4086|SMAD family member 1	NM_005900|SMAD1|4086|SMAD family member 1	BC001878|SMAD1|4086|SMAD family member 1
hg18_v1_chr11_+_9552809_9552809	0.39002	SOX2.p2	AK122837|WEE1|7465|WEE1 homolog (S. pombe)	NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)
hg18_v1_chr12_+_67919583_67919618	0.389878	SOX2.p2	NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr4_+_25931745_25931815	0.389668	SOX2.p2	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr12_-_11439752_11439764	0.387389	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2
hg18_v1_chr19_+_44886785_44886981	0.385234	SOX2.p2	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14	NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14	BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14	AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14	FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14
hg18_v1_chr10_+_92970487_92970541	0.384477	SOX2.p2	AL832496|PCGF5|84333|polycomb group ring finger 5
hg18_v1_chr8_+_59486376_59486502	0.38167	SOX2.p2	BC113645|UBXN2B|137886|UBX domain protein 2B	NM_001077619|UBXN2B|137886|UBX domain protein 2B	AK126300|UBXN2B|137886|UBX domain protein 2B	AL831990|UBXN2B|137886|UBX domain protein 2B	AL833075|UBXN2B|137886|UBX domain protein 2B	BX647876|UBXN2B|137886|UBX domain protein 2B
hg18_v1_chr4_-_83566045_83566089	0.381031	SOX2.p2	
hg18_v1_chr2_-_207739815_207739925	0.375272	SOX2.p2	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr2_+_201384889_201384893	0.375097	SOX2.p2	D13630|BZW1|9689|basic leucine zipper and W2 domains 1	BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr6_+_64403668_64403683	0.374135	SOX2.p2	AK307869|PHF3|23469|PHD finger protein 3
hg18_v1_chr12_+_94135645_94136005	0.371847	SOX2.p2	NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein	AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein	AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein	BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein
hg18_v1_chr6_-_64087806_64087840	0.371659	SOX2.p2	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain
hg18_v1_chr10_-_98326435_98326563	0.371417	SOX2.p2	BC020959|TM9SF3|56889|transmembrane 9 superfamily member 3	AK027788|TM9SF3|56889|transmembrane 9 superfamily member 3	AY358819|TM9SF3|56889|transmembrane 9 superfamily member 3
hg18_v1_chr1_-_196776697_196776697	0.371329	SOX2.p2	NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3	NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg18_v1_chr6_+_64403631_64403667	0.371188	SOX2.p2	AK055678|PHF3|23469|PHD finger protein 3
hg18_v1_chr2_+_171280046_171280163	0.37061	SOX2.p2	NM_001003845|SP5|389058|Sp5 transcription factor	AB096175|SP5|389058|Sp5 transcription factor
hg18_v1_chr13_-_40491405_40491482	0.369753	SOX2.p2	M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)
hg18_v1_chr14_+_56927066_56927105	0.369518	SOX2.p2	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr2_+_201384842_201384877	0.369438	SOX2.p2	Z70221|BZW1|9689|basic leucine zipper and W2 domains 1	AK096489|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr5_+_90711887_90711949	0.368569	SOX2.p2	BC043415|LOC100129716|100129716|hypothetical LOC100129716
hg18_v1_chr1_+_24158887_24158897	0.368441	SOX2.p2	NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr9_+_90193807_90193830	0.367795	SOX2.p2	AK315854|SPIN1|10927|spindlin 1
hg18_v1_chr2_+_201384904_201384907	0.366567	SOX2.p2	AK223245|BZW1|9689|basic leucine zipper and W2 domains 1	BC026303|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr5_+_57914658_57914695	0.365843	SOX2.p2	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family	BC013033|RAB3C|115827|RAB3C, member RAS oncogene family	NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family
hg18_v1_chr10_+_53744043_53744200	0.365774	SOX2.p2	NM_012242|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AK314902|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR625465|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594616|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR601383|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603553|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	BC001539|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AY359005|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR594190|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR595444|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR603030|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR605923|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591735|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR600818|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR604811|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR610857|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF127563|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	AF177394|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	CR591322|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ892222|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)	DQ895421|DKK1|22943|dickkopf homolog 1 (Xenopus laevis)
hg18_v1_chr2_-_210726539_210726633	0.36504	SOX2.p2	AK074441|C2orf67|151050|chromosome 2 open reading frame 67	BC070141|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr2_-_18634257_18634318	0.362697	SOX2.p2	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB	BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough	AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB	AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB	NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB
hg18_v1_chr6_-_134680888_134680888	0.362094	SOX2.p2	AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1	NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1
hg18_v1_chr2_+_33213111_33213308	0.35976	SOX2.p2	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1	NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1	AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1	BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1	M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1	AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1
hg18_v1_chr2_-_47986160_47986435	0.359747	SOX2.p2	BC130445|FBXO11|80204|F-box protein 11	BC136480|FBXO11|80204|F-box protein 11	AK292877|FBXO11|80204|F-box protein 11	AF176706|FBXO11|80204|F-box protein 11	AF174599|FBXO11|80204|F-box protein 11	AK223592|FBXO11|80204|F-box protein 11	BC043258|FBXO11|80204|F-box protein 11	AY827075|FBXO11|80204|F-box protein 11	AK297444|FBXO11|80204|F-box protein 11	NM_001190274|FBXO11|80204|F-box protein 11
hg18_v1_chr3_+_23904086_23904139	0.359233	SOX2.p2	CR609756|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr4_+_90252990_90252990	0.359195	SOX2.p2	AK027653|TIGD2|166815|tigger transposable element derived 2	NM_145715|TIGD2|166815|tigger transposable element derived 2
hg18_v1_chr4_-_83566246_83566273	0.358413	SOX2.p2	X75683|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_+_214984705_214984705	0.357718	SOX2.p2	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like
hg18_v1_chr16_-_20610078_20610078	0.357189	SOX2.p2	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1	NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1
hg18_v1_chr6_+_4721825_4722015	0.355942	SOX2.p2	BC119682|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr3_-_153470022_153470049	0.353528	SOX2.p2	AK304857|LOC401093|401093|hypothetical LOC401093	AK316515|LOC401093|401093|hypothetical LOC401093
hg18_v1_chr14_+_56927014_56927058	0.353246	SOX2.p2	AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit	AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg18_v1_chr6_+_89847019_89847181	0.352021	SOX2.p2	CR618392|PNRC1|10957|proline-rich nuclear receptor coactivator 1	NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1
hg18_v1_chr12_-_88573949_88574015	0.350527	SOX2.p2	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1	BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1
hg18_v1_chrX_-_33267646_33267646	0.349614	SOX2.p2	NM_000109|DMD|1756|dystrophin
hg18_v1_chr16_+_24475129_24475130	0.349576	SOX2.p2	BC029649|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr3_+_192529567_192530154	0.349489	SOX2.p2	AJ416916|CCDC50|152137|coiled-coil domain containing 50	AJ557013|CCDC50|152137|coiled-coil domain containing 50	NM_174908|CCDC50|152137|coiled-coil domain containing 50	NM_178335|CCDC50|152137|coiled-coil domain containing 50	CR610519|CCDC50|152137|coiled-coil domain containing 50	CR618316|CCDC50|152137|coiled-coil domain containing 50	CR614299|CCDC50|152137|coiled-coil domain containing 50	CR603155|CCDC50|152137|coiled-coil domain containing 50	CR592179|CCDC50|152137|coiled-coil domain containing 50	CR601015|CCDC50|152137|coiled-coil domain containing 50	CR618301|CCDC50|152137|coiled-coil domain containing 50	BC065004|CCDC50|152137|coiled-coil domain containing 50
hg18_v1_chr6_+_88026338_88026428	0.347804	SOX2.p2	BC063594|ZNF292|23036|zinc finger protein 292	AY684300|ZNF292|23036|zinc finger protein 292
hg18_v1_chr7_+_93388951_93389086	0.347505	SOX2.p2	NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR622777|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR596301|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR592688|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR603702|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	CR590486|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11
hg18_v1_chr5_+_65258250_65258310	0.346777	SOX2.p2	AF276423|ERBB2IP|55914|erbb2 interacting protein	BC050692|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr2_+_201384880_201384887	0.34671	SOX2.p2	CR624660|BZW1|9689|basic leucine zipper and W2 domains 1
hg18_v1_chr1_+_87569959_87570047	0.346523	SOX2.p2	CR599134|LMO4|8543|LIM domain only 4	BC065818|LMO4|8543|LIM domain only 4
hg18_v1_chr6_+_45404031_45404037	0.346181	SOX2.p2	NM_001015051|RUNX2|860|runt-related transcription factor 2	NM_001024630|RUNX2|860|runt-related transcription factor 2	AF053952|RUNX2|860|runt-related transcription factor 2
hg18_v1_chr15_-_48198697_48198819	0.346092	SOX2.p2	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4	BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4	NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4
hg18_v1_chr10_+_97749837_97749872	0.344487	SOX2.p2	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B	NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B	AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B	BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B
hg18_v1_chr9_-_72673753_72673808	0.343939	SOX2.p2	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3
hg18_v1_chrX_-_31436335_31436335	0.343708	SOX2.p2	NM_004014|DMD|1756|dystrophin	S62617|DMD|1756|dystrophin
hg18_v1_chr4_+_74499651_74499678	0.343445	SOX2.p2	CR608483|ALB|213|albumin
hg18_v1_chr12_-_61283474_61283480	0.343068	SOX2.p2	BC136288|C12orf61|283416|chromosome 12 open reading frame 61	AK098456|C12orf61|283416|chromosome 12 open reading frame 61	NM_175895|C12orf61|283416|chromosome 12 open reading frame 61
hg18_v1_chr20_-_21326046_21326182	0.342216	SOX2.p2	NM_033176|NKX2-4|644524|NK2 homeobox 4
hg18_v1_chr15_+_61583846_61584015	0.341667	SOX2.p2	AK301236|USP3|9960|ubiquitin specific peptidase 3	BC065300|USP3|9960|ubiquitin specific peptidase 3	NM_006537|USP3|9960|ubiquitin specific peptidase 3	AY461579|USP3|9960|ubiquitin specific peptidase 3	BC100029|USP3|9960|ubiquitin specific peptidase 3	AF073344|USP3|9960|ubiquitin specific peptidase 3	BC107137|USP3|9960|ubiquitin specific peptidase 3	BC107138|USP3|9960|ubiquitin specific peptidase 3	AK300948|USP3|9960|ubiquitin specific peptidase 3	AK301563|USP3|9960|ubiquitin specific peptidase 3	BC018113|USP3|9960|ubiquitin specific peptidase 3	BX647760|USP3|9960|ubiquitin specific peptidase 3	DQ891025|USP3|9960|ubiquitin specific peptidase 3	DQ894205|USP3|9960|ubiquitin specific peptidase 3	BT007269|USP3|9960|ubiquitin specific peptidase 3	AK307810|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr10_+_22765996_22766014	0.341667	SOX2.p2	AK295718|LOC100289455|100289455|hypothetical LOC100289455
hg18_v1_chr21_+_17807167_17807318	0.341654	SOX2.p2	NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor	AK313526|CXADR|1525|coxsackie virus and adenovirus receptor	BC010536|CXADR|1525|coxsackie virus and adenovirus receptor	Y07593|CXADR|1525|coxsackie virus and adenovirus receptor	DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor	DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor	AF124598|CXADR|1525|coxsackie virus and adenovirus receptor	AY072910|CXADR|1525|coxsackie virus and adenovirus receptor	AY072911|CXADR|1525|coxsackie virus and adenovirus receptor	AY072912|CXADR|1525|coxsackie virus and adenovirus receptor	BT019876|CXADR|1525|coxsackie virus and adenovirus receptor	GU474812|CXADR|1525|coxsackie virus and adenovirus receptor	U90716|CXADR|1525|coxsackie virus and adenovirus receptor
hg18_v1_chr2_+_54638957_54639182	0.341001	SOX2.p2	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr17_+_69939806_69939877	0.339489	SOX2.p2	CR597806|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	CR592340|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg18_v1_chr6_+_88111289_88111289	0.339434	SOX2.p2	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163
hg18_v1_chr20_-_45418818_45418973	0.338439	SOX2.p2	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8	AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8	AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8	AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8	AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8	BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8	BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8	BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8	BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8	NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8	BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr4_+_146250978_146251023	0.338107	SOX2.p2	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1
hg18_v1_chr9_+_18464138_18464228	0.337768	SOX2.p2	AK291956|ADAMTSL1|92949|ADAMTS-like 1	BC030262|ADAMTSL1|92949|ADAMTS-like 1	AF176313|ADAMTSL1|92949|ADAMTS-like 1
hg18_v1_chr5_+_65258139_65258193	0.337685	SOX2.p2	AF263744|ERBB2IP|55914|erbb2 interacting protein	NM_001006600|ERBB2IP|55914|erbb2 interacting protein	NM_018695|ERBB2IP|55914|erbb2 interacting protein	AK295708|ERBB2IP|55914|erbb2 interacting protein	AK304693|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr18_-_29412148_29412306	0.33679	SOX2.p2	
hg18_v1_chr14_+_96333434_96333503	0.336256	SOX2.p2	NM_003384|VRK1|7443|vaccinia related kinase 1	AK290110|VRK1|7443|vaccinia related kinase 1	BC103761|VRK1|7443|vaccinia related kinase 1	AB000449|VRK1|7443|vaccinia related kinase 1	BC112075|VRK1|7443|vaccinia related kinase 1	BC113510|VRK1|7443|vaccinia related kinase 1	CR608451|VRK1|7443|vaccinia related kinase 1	BC005970|VRK1|7443|vaccinia related kinase 1
hg18_v1_chr14_+_19761708_19761708	0.336165	SOX2.p2	NM_001004480|OR11H6|122748|olfactory receptor, family 11, subfamily H, member 6
hg18_v1_chr13_+_96884682_96884725	0.335794	SOX2.p2	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family	BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family	EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family	X12534|RAP2A|5911|RAP2A, member of RAS oncogene family	AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family
hg18_v1_chr2_-_213724577_213724577	0.334907	SOX2.p2	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr9_+_89302574_89302803	0.334544	SOX2.p2	NM_004938|DAPK1|1612|death-associated protein kinase 1	X76104|DAPK1|1612|death-associated protein kinase 1	AK295119|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr6_+_123142559_123142638	0.334	SOX2.p2	AK311867|FABP7|2173|fatty acid binding protein 7, brain	AK289836|FABP7|2173|fatty acid binding protein 7, brain	AJ002962|FABP7|2173|fatty acid binding protein 7, brain	U51338|FABP7|2173|fatty acid binding protein 7, brain	D50373|FABP7|2173|fatty acid binding protein 7, brain	D88648|FABP7|2173|fatty acid binding protein 7, brain	AL512688|FABP7|2173|fatty acid binding protein 7, brain	U81235|FABP7|2173|fatty acid binding protein 7, brain	CR457057|FABP7|2173|fatty acid binding protein 7, brain	DQ891437|FABP7|2173|fatty acid binding protein 7, brain	DQ894613|FABP7|2173|fatty acid binding protein 7, brain	EU176601|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr16_+_68284252_68284329	0.33199	SOX2.p2	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr14_+_19365447_19365447	0.331947	SOX2.p2	NM_001004723|OR4N2|390429|olfactory receptor, family 4, subfamily N, member 2
hg18_v1_chr4_-_64957595_64957788	0.330913	SOX2.p2	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like
hg18_v1_chr6_+_41148869_41148938	0.3309	SOX2.p2	BC039244|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr6_+_4721640_4721678	0.330432	SOX2.p2	AK291601|CDYL|9425|chromodomain protein, Y-like	BC108725|CDYL|9425|chromodomain protein, Y-like	NM_004824|CDYL|9425|chromodomain protein, Y-like
hg18_v1_chr15_+_54998264_54998321	0.330273	SOX2.p2	M83233|TCF12|6938|transcription factor 12
hg18_v1_chr13_+_92677012_92677845	0.330248	SOX2.p2	NM_005708|GPC6|10082|glypican 6	AF105267|GPC6|10082|glypican 6	AY358462|GPC6|10082|glypican 6	BC106947|GPC6|10082|glypican 6	AK304338|GPC6|10082|glypican 6	AK130013|GPC6|10082|glypican 6	AK290144|GPC6|10082|glypican 6	AK074741|GPC6|10082|glypican 6
hg18_v1_chr5_+_138706029_138706097	0.330037	SOX2.p2	BC048106|PAIP2|51247|poly(A) binding protein interacting protein 2	NM_001033112|PAIP2|51247|poly(A) binding protein interacting protein 2	BC062718|PAIP2|51247|poly(A) binding protein interacting protein 2	BC039337|PAIP2|51247|poly(A) binding protein interacting protein 2
hg18_v1_chr5_+_112101454_112101490	0.329093	SOX2.p2	NM_000038|APC|324|adenomatous polyposis coli	NM_001127510|APC|324|adenomatous polyposis coli	BC034955|APC|324|adenomatous polyposis coli	BC056268|APC|324|adenomatous polyposis coli	AB210001|APC|324|adenomatous polyposis coli
hg18_v1_chr7_+_73506172_73506316	0.328763	SOX2.p2	AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1	BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr3_+_112743729_112743785	0.328541	SOX2.p2	AK290719|CD96|10225|CD96 molecule	AK315237|CD96|10225|CD96 molecule	AL833681|CD96|10225|CD96 molecule
hg18_v1_chr6_+_44463418_44463538	0.327567	SOX2.p2	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	CR594844|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)
hg18_v1_chr1_+_24158898_24158969	0.327404	SOX2.p2	AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2	BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2	AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2
hg18_v1_chr1_+_176577228_176577286	0.327185	SOX2.p2	AF047711|RASAL2|9462|RAS protein activator like 2	NM_004841|RASAL2|9462|RAS protein activator like 2	AK290308|RASAL2|9462|RAS protein activator like 2
hg18_v1_chr3_+_142175329_142175385	0.326722	SOX2.p2	CR602139|SLC25A36|55186|solute carrier family 25, member 36
hg18_v1_chr15_-_68781662_68781700	0.326578	SOX2.p2	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg18_v1_chr9_+_89302239_89302573	0.326519	SOX2.p2	AK296839|DAPK1|1612|death-associated protein kinase 1	AB208871|DAPK1|1612|death-associated protein kinase 1
hg18_v1_chr13_+_97593469_97593505	0.325703	SOX2.p2	BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr4_+_25931725_25931744	0.323573	SOX2.p2	AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	CR624016|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region
hg18_v1_chr3_+_125296217_125296374	0.323241	SOX2.p2	AK314126|KALRN|8997|kalirin, RhoGEF kinase	AK311154|KALRN|8997|kalirin, RhoGEF kinase	NM_001024660|KALRN|8997|kalirin, RhoGEF kinase	NM_003947|KALRN|8997|kalirin, RhoGEF kinase	AK311581|KALRN|8997|kalirin, RhoGEF kinase	U94190|KALRN|8997|kalirin, RhoGEF kinase	BC037924|KALRN|8997|kalirin, RhoGEF kinase
hg18_v1_chr4_-_152368492_152368631	0.322587	SOX2.p2	AK294476|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr20_-_51633042_51633042	0.322357	SOX2.p2	AF041259|ZNF217|7764|zinc finger protein 217	NM_006526|ZNF217|7764|zinc finger protein 217
hg18_v1_chr17_-_36725470_36725472	0.322281	SOX2.p2	BC069078|KRTAP17-1|83902|keratin associated protein 17-1	AJ406952|KRTAP17-1|83902|keratin associated protein 17-1	BC069297|KRTAP17-1|83902|keratin associated protein 17-1	NM_031964|KRTAP17-1|83902|keratin associated protein 17-1
hg18_v1_chr5_+_143171918_143171984	0.322226	SOX2.p2	AF103884|HMHB1|57824|histocompatibility (minor) HB-1	NM_021182|HMHB1|57824|histocompatibility (minor) HB-1	BC096711|HMHB1|57824|histocompatibility (minor) HB-1	BC098145|HMHB1|57824|histocompatibility (minor) HB-1	BC098244|HMHB1|57824|histocompatibility (minor) HB-1	BC098251|HMHB1|57824|histocompatibility (minor) HB-1	BC104412|HMHB1|57824|histocompatibility (minor) HB-1	BC104413|HMHB1|57824|histocompatibility (minor) HB-1	BC113894|HMHB1|57824|histocompatibility (minor) HB-1	BC113971|HMHB1|57824|histocompatibility (minor) HB-1
hg18_v1_chr1_+_243065537_243065589	0.322206	SOX2.p2	AK130498|FAM36A|116228|family with sequence similarity 36, member A	BC062419|FAM36A|116228|family with sequence similarity 36, member A	BC018519|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr1_-_52293356_52293476	0.322164	SOX2.p2	BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR593611|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR612587|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR622088|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	CR611104|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)
hg18_v1_chr2_+_228386800_228386871	0.3218	SOX2.p2	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20	NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20	NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20	D86955|CCL20|6364|chemokine (C-C motif) ligand 20	U64197|CCL20|6364|chemokine (C-C motif) ligand 20	DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20	DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20	U77035|CCL20|6364|chemokine (C-C motif) ligand 20
hg18_v1_chr17_-_26648375_26648505	0.321718	SOX2.p2	X51694|OMG|4974|oligodendrocyte myelin glycoprotein	BC018050|OMG|4974|oligodendrocyte myelin glycoprotein	AK222663|OMG|4974|oligodendrocyte myelin glycoprotein	AK312445|OMG|4974|oligodendrocyte myelin glycoprotein	NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein
hg18_v1_chr3_+_19963865_19963945	0.32158	SOX2.p2	AK312618|RAB5A|5868|RAB5A, member RAS oncogene family	BC018288|RAB5A|5868|RAB5A, member RAS oncogene family	AK309287|RAB5A|5868|RAB5A, member RAS oncogene family	AK295992|RAB5A|5868|RAB5A, member RAS oncogene family	BC001267|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr4_-_75938710_75938905	0.32119	SOX2.p2	BC011618|BTC|685|betacellulin	S55606|BTC|685|betacellulin	AB109441|BTC|685|betacellulin	NM_001729|BTC|685|betacellulin
hg18_v1_chr18_+_53863865_53863946	0.320953	SOX2.p2	AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr3_+_145174856_145174958	0.319452	SOX2.p2	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58	AK294020|C3orf58|205428|chromosome 3 open reading frame 58
hg18_v1_chr6_+_57062937_57062943	0.319045	SOX2.p2	BX648081|ZNF451|26036|zinc finger protein 451
hg18_v1_chr1_+_26896519_26896593	0.318997	SOX2.p2	AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)
hg18_v1_chr13_+_51056484_51056592	0.318608	SOX2.p2	NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2
hg18_v1_chr18_+_29412538_29412576	0.318592	SOX2.p2	NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)	AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)
hg18_v1_chr3_+_174598937_174598937	0.31785	SOX2.p2	BC032555|NLGN1|22871|neuroligin 1	NM_014932|NLGN1|22871|neuroligin 1
hg18_v1_chr6_+_97117144_97117237	0.316731	SOX2.p2	NM_001170807|FHL5|9457|four and a half LIM domains 5	NM_020482|FHL5|9457|four and a half LIM domains 5	AK058175|FHL5|9457|four and a half LIM domains 5	BC029490|FHL5|9457|four and a half LIM domains 5	BC021723|FHL5|9457|four and a half LIM domains 5	AK223539|FHL5|9457|four and a half LIM domains 5
hg18_v1_chr3_-_14964861_14964934	0.316702	SOX2.p2	BC033386|LOC100505673|100505673|hypothetical LOC100505673
hg18_v1_chr8_+_63324053_63324184	0.3154	SOX2.p2	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3	NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr7_-_93027057_93027057	0.315195	SOX2.p2	AB022178|CALCR|799|calcitonin receptor	NM_001164738|CALCR|799|calcitonin receptor
hg18_v1_chr2_-_225078931_225079014	0.314937	SOX2.p2	AF052147|CUL3|8452|cullin 3	BC031844|CUL3|8452|cullin 3
hg18_v1_chr18_+_27425727_27425863	0.314558	SOX2.p2	NM_000371|TTR|7276|transthyretin	AK312051|TTR|7276|transthyretin	BC005310|TTR|7276|transthyretin	BC020791|TTR|7276|transthyretin	D00096|TTR|7276|transthyretin	K02091|TTR|7276|transthyretin	M10605|TTR|7276|transthyretin	X59498|TTR|7276|transthyretin	AF162690|TTR|7276|transthyretin	BT007189|TTR|7276|transthyretin	CR456908|TTR|7276|transthyretin	DQ839490|TTR|7276|transthyretin	U19780|TTR|7276|transthyretin
hg18_v1_chr5_-_16989290_16989367	0.314485	SOX2.p2	BC050682|MYO10|4651|myosin X	BC041694|MYO10|4651|myosin X	BC108736|MYO10|4651|myosin X	BC032669|MYO10|4651|myosin X
hg18_v1_chr1_+_87569889_87569938	0.314468	SOX2.p2	
hg18_v1_chr6_+_57062918_57062926	0.31407	SOX2.p2	AK302577|ZNF451|26036|zinc finger protein 451
hg18_v1_chr2_+_69910277_69910345	0.313921	SOX2.p2	AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chr5_-_32439067_32439153	0.312857	SOX2.p2	BC062986|ZFR|51663|zinc finger RNA binding protein	BC051893|ZFR|51663|zinc finger RNA binding protein
hg18_v1_chr14_+_22059212_22059254	0.312855	SOX2.p2	
hg18_v1_chr6_+_57062760_57062787	0.312752	SOX2.p2	AY055204|ZNF451|26036|zinc finger protein 451	NM_001031623|ZNF451|26036|zinc finger protein 451	NM_015555|ZNF451|26036|zinc finger protein 451
hg18_v1_chr6_+_57062848_57062883	0.312228	SOX2.p2	BC021712|ZNF451|26036|zinc finger protein 451
hg18_v1_chr6_+_130381408_130381428	0.311827	SOX2.p2	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)
hg18_v1_chr2_-_138762909_138762922	0.311514	SOX2.p2	
hg18_v1_chr12_-_10479810_10479882	0.311032	SOX2.p2	BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3	BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2	BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2
hg18_v1_chr12_-_11354620_11354635	0.310927	SOX2.p2	BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4	BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4	K03207|PRB4|5545|proline-rich protein BstNI subfamily 4	NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4	BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4
hg18_v1_chr5_+_140215778_140215817	0.310345	SOX2.p2	BC130447|PCDHA10|56139|protocadherin alpha 10	AF152306|PCDHA10|56139|protocadherin alpha 10	AF152475|PCDHA10|56139|protocadherin alpha 10	AF169689|PCDHA10|56139|protocadherin alpha 10	NM_018901|PCDHA10|56139|protocadherin alpha 10	NM_031859|PCDHA10|56139|protocadherin alpha 10	NM_031860|PCDHA10|56139|protocadherin alpha 10
hg18_v1_chr6_+_57062944_57062967	0.309469	SOX2.p2	BC098382|ZNF451|26036|zinc finger protein 451	AK225806|ZNF451|26036|zinc finger protein 451	AB011148|ZNF451|26036|zinc finger protein 451
hg18_v1_chr11_-_6870306_6870405	0.309222	SOX2.p2	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2	BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2
hg18_v1_chr3_-_166278969_166278976	0.308762	SOX2.p2	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)	BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)	X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)	NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)
hg18_v1_chr4_-_17415918_17416015	0.307817	SOX2.p2	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16
hg18_v1_chr14_+_19414230_19414266	0.307788	SOX2.p2	BC136941|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	BC136942|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2	NM_001005501|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2
hg18_v1_chr2_+_208103068_208103073	0.307711	SOX2.p2	AY347527|CREB1|1385|cAMP responsive element binding protein 1	AK315226|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr9_-_21472311_21472311	0.30652	SOX2.p2	AY358570|IFNE|338376|interferon, epsilon	NM_176891|IFNE|338376|interferon, epsilon
hg18_v1_chr9_-_5958367_5958450	0.306324	SOX2.p2	
hg18_v1_chr14_+_38805251_38805252	0.306152	SOX2.p2	AF338233|CTAGE5|4253|CTAGE family, member 5	NM_203356|CTAGE5|4253|CTAGE family, member 5
hg18_v1_chr3_+_179736917_179736917	0.305938	SOX2.p2	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr4_-_184478920_184478920	0.305879	SOX2.p2	NM_001111319|CLDN22|53842|claudin 22
hg18_v1_chr3_+_44746101_44746127	0.305446	SOX2.p2	AK316574|ZNF501|115560|zinc finger protein 501	AK054613|ZNF501|115560|zinc finger protein 501	AK297216|ZNF501|115560|zinc finger protein 501	BC013762|ZNF501|115560|zinc finger protein 501	NM_145044|ZNF501|115560|zinc finger protein 501
hg18_v1_chr4_+_123311207_123311207	0.304046	SOX2.p2	DQ335469|KIAA1109|84162|KIAA1109	NM_015312|KIAA1109|84162|KIAA1109
hg18_v1_chr1_+_243065630_243065647	0.304018	SOX2.p2	
hg18_v1_chr2_-_160180197_160180323	0.303095	SOX2.p2	AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr9_+_36026900_36026994	0.302403	SOX2.p2	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	CR593801|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs
hg18_v1_chr12_-_11178109_11178109	0.302112	SOX2.p2	NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30
hg18_v1_chr1_+_154318954_154319041	0.301914	SOX2.p2	AK056143|LMNA|4000|lamin A/C
hg18_v1_chr5_+_132237253_132237258	0.301684	SOX2.p2	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2	AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2	NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2	BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2
hg18_v1_chr4_+_76868763_76868814	0.301262	SOX2.p2	BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr2_-_215957927_215957938	0.300982	SOX2.p2	U42458|FN1|2335|fibronectin 1
hg18_v1_chr4_-_83566802_83566811	0.30076	SOX2.p2	AK057480|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr2_+_208102860_208102916	0.299231	SOX2.p2	NM_004379|CREB1|1385|cAMP responsive element binding protein 1	NM_134442|CREB1|1385|cAMP responsive element binding protein 1	CR621261|CREB1|1385|cAMP responsive element binding protein 1	BC095407|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr2_+_166034402_166034458	0.299117	SOX2.p2	AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3
hg18_v1_chr20_+_29309127_29309127	0.298651	SOX2.p2	DQ012019|DEFB115|245929|defensin, beta 115	NM_001037730|DEFB115|245929|defensin, beta 115
hg18_v1_chr7_+_143437539_143437608	0.298518	SOX2.p2	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2
hg18_v1_chr3_+_19963534_19963853	0.298265	SOX2.p2	NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family
hg18_v1_chr3_-_197726587_197726633	0.298109	SOX2.p2	AK291522|C3orf43|255798|chromosome 3 open reading frame 43	BC118556|C3orf43|255798|chromosome 3 open reading frame 43	BC118636|C3orf43|255798|chromosome 3 open reading frame 43	AL833140|C3orf43|255798|chromosome 3 open reading frame 43	AL833443|C3orf43|255798|chromosome 3 open reading frame 43	AK123917|C3orf43|255798|chromosome 3 open reading frame 43	NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43
hg18_v1_chr10_+_97793054_97793689	0.297928	SOX2.p2	BC043175|CCNJ|54619|cyclin J	NM_001134375|CCNJ|54619|cyclin J	NM_001134376|CCNJ|54619|cyclin J	NM_019084|CCNJ|54619|cyclin J	AK092360|CCNJ|54619|cyclin J	AK297264|CCNJ|54619|cyclin J
hg18_v1_chr8_-_93176819_93176887	0.297391	SOX2.p2	AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr2_+_69910424_69910527	0.297356	SOX2.p2	EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)
hg18_v1_chr5_-_11956964_11957109	0.297355	SOX2.p2	U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr5_+_95093267_95093318	0.297078	SOX2.p2	
hg18_v1_chr10_+_102722275_102722275	0.296814	SOX2.p2	NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
hg18_v1_chr15_+_61583826_61583845	0.296771	SOX2.p2	AK314223|USP3|9960|ubiquitin specific peptidase 3
hg18_v1_chr2_+_155263338_155263533	0.295234	SOX2.p2	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3
hg18_v1_chr15_-_47125788_47126069	0.294171	SOX2.p2	D87445|SECISBP2L|9728|SECIS binding protein 2-like	AK307480|SECISBP2L|9728|SECIS binding protein 2-like	AK308183|SECISBP2L|9728|SECIS binding protein 2-like	BC008635|SECISBP2L|9728|SECIS binding protein 2-like	BC033001|SECISBP2L|9728|SECIS binding protein 2-like	NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like	NM_014701|SECISBP2L|9728|SECIS binding protein 2-like
hg18_v1_chr13_+_97593411_97593434	0.294051	SOX2.p2	NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr11_-_48330574_48330574	0.294011	SOX2.p2	NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45
hg18_v1_chr17_-_36451189_36451238	0.293733	SOX2.p2	AB055057|KRTAP1-1|81851|keratin associated protein 1-1	BC101152|KRTAP1-3|81850|keratin associated protein 1-3	AJ406926|KRTAP1-1|81851|keratin associated protein 1-1	BC105069|KRTAP1-1|81851|keratin associated protein 1-1	BC105071|KRTAP1-1|81851|keratin associated protein 1-1	BC069321|KRTAP1-1|81851|keratin associated protein 1-1	BC069450|KRTAP1-1|81851|keratin associated protein 1-1	AB052868|KRTAP1-1|81851|keratin associated protein 1-1	AB052934|KRTAP1-1|81851|keratin associated protein 1-1	NM_030967|KRTAP1-1|81851|keratin associated protein 1-1
hg18_v1_chr20_+_31613800_31613877	0.293658	SOX2.p2	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr7_+_105390892_105390977	0.292656	SOX2.p2	NM_152750|CDHR3|222256|cadherin-related family member 3	AK126338|CDHR3|222256|cadherin-related family member 3	AK131293|CDHR3|222256|cadherin-related family member 3	AK304118|CDHR3|222256|cadherin-related family member 3	BC111696|CDHR3|222256|cadherin-related family member 3	BC111738|CDHR3|222256|cadherin-related family member 3	AK304352|CDHR3|222256|cadherin-related family member 3
hg18_v1_chr5_+_161045235_161045235	0.292581	SOX2.p2	NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6
hg18_v1_chr19_+_37528340_37528464	0.29224	SOX2.p2	NM_001136156|ZNF507|22847|zinc finger protein 507	NM_014910|ZNF507|22847|zinc finger protein 507	AK292526|ZNF507|22847|zinc finger protein 507	AB029007|ZNF507|22847|zinc finger protein 507	BX640881|ZNF507|22847|zinc finger protein 507	BC136417|ZNF507|22847|zinc finger protein 507	AL713775|ZNF507|22847|zinc finger protein 507
hg18_v1_chr12_+_68028407_68028546	0.29221	SOX2.p2	AK311779|LYZ|4069|lysozyme	J03801|LYZ|4069|lysozyme	FJ795023|LYZ|4069|lysozyme	BC004147|LYZ|4069|lysozyme	M21119|LYZ|4069|lysozyme	CR607267|LYZ|4069|lysozyme	M19045|LYZ|4069|lysozyme	DQ892271|LYZ|4069|lysozyme	DQ895472|LYZ|4069|lysozyme	U25677|LYZ|4069|lysozyme	CR615077|LYZ|4069|lysozyme
hg18_v1_chr2_+_167468220_167468220	0.292178	SOX2.p2	NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2	NM_152381|XIRP2|129446|xin actin-binding repeat containing 2
hg18_v1_chr1_-_26105954_26105954	0.290943	SOX2.p2	NM_203399|STMN1|3925|stathmin 1
hg18_v1_chr20_+_31219543_31219620	0.2908	SOX2.p2	AK291854|C20orf70|140683|chromosome 20 open reading frame 70	BC065726|C20orf70|140683|chromosome 20 open reading frame 70	NM_080574|C20orf70|140683|chromosome 20 open reading frame 70
hg18_v1_chr9_-_23816062_23816062	0.289989	SOX2.p2	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
hg18_v1_chr1_+_243065215_243065449	0.289594	SOX2.p2	AK125259|FAM36A|116228|family with sequence similarity 36, member A	NM_198076|FAM36A|116228|family with sequence similarity 36, member A	CR592197|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr6_+_142510094_142510104	0.288843	SOX2.p2	AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr2_+_190981257_190981360	0.288753	SOX2.p2	AK127176|MFSD6|54842|major facilitator superfamily domain containing 6	NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr2_-_38379031_38379115	0.288265	SOX2.p2	AK316179|ATL2|64225|atlastin GTPase 2
hg18_v1_chr7_+_153633127_153633510	0.287993	SOX2.p2	AK309760|DPP6|1804|dipeptidyl-peptidase 6	AK308993|DPP6|1804|dipeptidyl-peptidase 6	AK293582|DPP6|1804|dipeptidyl-peptidase 6	NM_001936|DPP6|1804|dipeptidyl-peptidase 6	M96860|DPP6|1804|dipeptidyl-peptidase 6	AK294483|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr2_+_200878848_200878860	0.287985	SOX2.p2	NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr3_+_115099007_115099092	0.287426	SOX2.p2	AK304142|GRAMD1C|54762|GRAM domain containing 1C	NM_001172105|GRAMD1C|54762|GRAM domain containing 1C	AY358725|GRAMD1C|54762|GRAM domain containing 1C	AK292964|GRAMD1C|54762|GRAM domain containing 1C
hg18_v1_chr17_+_58625086_58625100	0.287011	SOX2.p2	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg18_v1_chr12_+_21417068_21417122	0.286985	SOX2.p2	NM_000415|IAPP|3375|islet amyloid polypeptide	J04422|IAPP|3375|islet amyloid polypeptide	X14904|IAPP|3375|islet amyloid polypeptide
hg18_v1_chr15_+_63609895_63610058	0.286918	SOX2.p2	BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	CR600449|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr2_+_170298700_170298767	0.286836	SOX2.p2	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)
hg18_v1_chr13_+_97593711_97593728	0.286559	SOX2.p2	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg18_v1_chr1_+_144152864_144153034	0.286136	SOX2.p2	CR612183|TXNIP|10628|thioredoxin interacting protein	CR593638|TXNIP|10628|thioredoxin interacting protein	CR614030|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr7_+_101245812_101246047	0.285503	SOX2.p2	AK222832|CUX1|1523|cut-like homeobox 1	AK303151|CUX1|1523|cut-like homeobox 1	AK125097|CUX1|1523|cut-like homeobox 1	BC066592|CUX1|1523|cut-like homeobox 1	L12579|CUX1|1523|cut-like homeobox 1	NM_001913|CUX1|1523|cut-like homeobox 1	AK297548|CUX1|1523|cut-like homeobox 1	BC012323|CUX1|1523|cut-like homeobox 1	AK122726|CUX1|1523|cut-like homeobox 1	BC025422|CUX1|1523|cut-like homeobox 1	NM_181500|CUX1|1523|cut-like homeobox 1
hg18_v1_chr1_+_243065590_243065628	0.285492	SOX2.p2	AK000866|FAM36A|116228|family with sequence similarity 36, member A	BC095486|FAM36A|116228|family with sequence similarity 36, member A	AK300760|FAM36A|116228|family with sequence similarity 36, member A	BC064399|FAM36A|116228|family with sequence similarity 36, member A	AF086182|FAM36A|116228|family with sequence similarity 36, member A
hg18_v1_chr17_+_65009986_65010164	0.285033	SOX2.p2	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr2_+_46779553_46779602	0.284764	SOX2.p2	AK290194|SOCS5|9655|suppressor of cytokine signaling 5	AB014571|SOCS5|9655|suppressor of cytokine signaling 5	AL136896|SOCS5|9655|suppressor of cytokine signaling 5	NM_014011|SOCS5|9655|suppressor of cytokine signaling 5
hg18_v1_chr9_+_91115924_91116027	0.28452	SOX2.p2	CR621720|CKS2|1164|CDC28 protein kinase regulatory subunit 2	NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2	X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR601576|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2	BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2	CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2
hg18_v1_chr2_+_208102937_208102995	0.284321	SOX2.p2	X55545|CREB1|1385|cAMP responsive element binding protein 1	M27691|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr18_+_30327341_30327382	0.283743	SOX2.p2	AJ009668|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr2_+_181553783_181553926	0.283179	SOX2.p2	CR603132|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr7_-_16811131_16811262	0.282985	SOX2.p2	BC015503|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF115926|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF038451|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	CR610899|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK296721|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK312942|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AK223067|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF088867|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AF087879|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	AY359009|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)	NM_006408|AGR2|10551|anterior gradient homolog 2 (Xenopus laevis)
hg18_v1_chr17_+_11864841_11864972	0.28255	SOX2.p2	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4	NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4	U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4	AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4	L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4	BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4	CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4
hg18_v1_chr1_+_213323182_213323284	0.282452	SOX2.p2	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2	NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2	AK294780|KCNK2|3776|potassium channel, subfamily K, member 2	AK291483|KCNK2|3776|potassium channel, subfamily K, member 2	BC143586|KCNK2|3776|potassium channel, subfamily K, member 2	BC101693|KCNK2|3776|potassium channel, subfamily K, member 2	BC101695|KCNK2|3776|potassium channel, subfamily K, member 2	AF004711|KCNK2|3776|potassium channel, subfamily K, member 2	EF165334|KCNK2|3776|potassium channel, subfamily K, member 2	AF171068|KCNK2|3776|potassium channel, subfamily K, member 2	BC069462|KCNK2|3776|potassium channel, subfamily K, member 2	EF165335|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr1_+_93317374_93317469	0.282218	SOX2.p2	NM_001164391|MTF2|22823|metal response element binding transcription factor 2	NM_001164392|MTF2|22823|metal response element binding transcription factor 2	NM_001164393|MTF2|22823|metal response element binding transcription factor 2	NM_007358|MTF2|22823|metal response element binding transcription factor 2	CR599562|MTF2|22823|metal response element binding transcription factor 2	AK290318|MTF2|22823|metal response element binding transcription factor 2	AK302900|MTF2|22823|metal response element binding transcription factor 2	AJ010014|MTF2|22823|metal response element binding transcription factor 2	AK302776|MTF2|22823|metal response element binding transcription factor 2	AF086908|MTF2|22823|metal response element binding transcription factor 2	BC010013|MTF2|22823|metal response element binding transcription factor 2	CR594521|MTF2|22823|metal response element binding transcription factor 2	BC001897|MTF2|22823|metal response element binding transcription factor 2
hg18_v1_chr7_-_86526880_86526949	0.282078	SOX2.p2	NM_001142749|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr7_+_20336849_20336875	0.281161	SOX2.p2	AK295044|ITGB8|3696|integrin, beta 8
hg18_v1_chr14_-_105589467_105589979	0.280399	SOX2.p2	BC041037|IGHM|3507|immunoglobulin heavy constant mu	BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK123975|LOC100126583|100126583|hypothetical LOC100126583	BX640822|LOC100126583|100126583|hypothetical LOC100126583
hg18_v1_chr5_-_88235624_88235677	0.28034	SOX2.p2	AL833268|MEF2C|4208|myocyte enhancer factor 2C	AL833274|MEF2C|4208|myocyte enhancer factor 2C	NM_001131005|MEF2C|4208|myocyte enhancer factor 2C	NM_001193347|MEF2C|4208|myocyte enhancer factor 2C
hg18_v1_chr20_-_17459973_17460012	0.279734	SOX2.p2	AF039655|BFSP1|631|beaded filament structural protein 1, filensin	Y16717|BFSP1|631|beaded filament structural protein 1, filensin	NM_001195|BFSP1|631|beaded filament structural protein 1, filensin
hg18_v1_chr2_+_86800940_86801065	0.277898	SOX2.p2	AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr20_-_14266200_14266312	0.277031	SOX2.p2	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3	NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3
hg18_v1_chr15_-_53996597_53996620	0.275282	SOX2.p2	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4
hg18_v1_chr12_-_21649019_21649047	0.275277	SOX2.p2	AK308373|GYS2|2998|glycogen synthase 2 (liver)	D29685|GYS2|2998|glycogen synthase 2 (liver)	NM_021957|GYS2|2998|glycogen synthase 2 (liver)
hg18_v1_chr5_+_147628567_147628615	0.274567	SOX2.p2	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)	NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)
hg18_v1_chr6_-_130578110_130578186	0.273287	SOX2.p2	BC029851|SAMD3|154075|sterile alpha motif domain containing 3	BC119757|SAMD3|154075|sterile alpha motif domain containing 3	BC119758|SAMD3|154075|sterile alpha motif domain containing 3	BC127653|SAMD3|154075|sterile alpha motif domain containing 3	BC127654|SAMD3|154075|sterile alpha motif domain containing 3	NM_152552|SAMD3|154075|sterile alpha motif domain containing 3
hg18_v1_chr18_+_30327243_30327282	0.272678	SOX2.p2	NM_001198945|DTNA|1837|dystrobrevin, alpha	NM_001392|DTNA|1837|dystrobrevin, alpha	NM_032975|DTNA|1837|dystrobrevin, alpha	NM_032979|DTNA|1837|dystrobrevin, alpha	AK294746|DTNA|1837|dystrobrevin, alpha	U26742|DTNA|1837|dystrobrevin, alpha
hg18_v1_chr3_-_62835601_62835743	0.271391	SOX2.p2	
hg18_v1_chr2_-_9061193_9061352	0.269266	SOX2.p2	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2
hg18_v1_chr18_+_64616296_64616349	0.269142	SOX2.p2	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B	CR749520|CCDC102B|79839|coiled-coil domain containing 102B
hg18_v1_chr17_-_36232366_36232396	0.268429	SOX2.p2	J04029|KRT10|3858|keratin 10	DQ893356|KRT10|3858|keratin 10	DQ896675|KRT10|3858|keratin 10	BC034697|KRT10|3858|keratin 10	NM_000421|KRT10|3858|keratin 10
hg18_v1_chr20_+_41519882_41519930	0.26823	SOX2.p2	NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr2_+_100453375_100453375	0.267588	SOX2.p2	AB164464|NMS|129521|neuromedin S	NM_001011717|NMS|129521|neuromedin S
hg18_v1_chr15_+_63609791_63609893	0.266723	SOX2.p2	AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1	AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1
hg18_v1_chr7_+_73506333_73506410	0.265974	SOX2.p2	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1	AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr8_+_63323739_63323781	0.26561	SOX2.p2	AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3
hg18_v1_chr7_+_29200636_29200660	0.263952	SOX2.p2	NM_004067|CHN2|1124|chimerin (chimaerin) 2
hg18_v1_chr1_-_163680941_163681215	0.262699	SOX2.p2	BC012063|RXRG|6258|retinoid X receptor, gamma	CR596807|RXRG|6258|retinoid X receptor, gamma	AK312922|RXRG|6258|retinoid X receptor, gamma	NM_006917|RXRG|6258|retinoid X receptor, gamma
hg18_v1_chr6_+_15354278_15354505	0.262063	SOX2.p2	AK292861|JARID2|3720|jumonji, AT rich interactive domain 2	BC046246|JARID2|3720|jumonji, AT rich interactive domain 2	NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2	U57592|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr20_+_23293020_23293020	0.261902	SOX2.p2	AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1	BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1	BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1	NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1
hg18_v1_chr10_+_126620681_126620681	0.261847	SOX2.p2	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1
hg18_v1_chr8_+_26296439_26296563	0.259633	SOX2.p2	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624662|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR607895|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR624736|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like	EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg18_v1_chr15_+_76517623_76517734	0.259522	SOX2.p2	AB209403|IREB2|3658|iron-responsive element binding protein 2	CR593632|IREB2|3658|iron-responsive element binding protein 2	BC017880|IREB2|3658|iron-responsive element binding protein 2	AK292992|IREB2|3658|iron-responsive element binding protein 2	BC117481|IREB2|3658|iron-responsive element binding protein 2	BC117483|IREB2|3658|iron-responsive element binding protein 2	BC143948|IREB2|3658|iron-responsive element binding protein 2	M58511|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr5_+_72148173_72148320	0.259471	SOX2.p2	NM_002270|TNPO1|3842|transportin 1	AK299671|TNPO1|3842|transportin 1	U70322|TNPO1|3842|transportin 1	AK301021|TNPO1|3842|transportin 1	AK308177|TNPO1|3842|transportin 1	BC040340|TNPO1|3842|transportin 1
hg18_v1_chr5_+_159781454_159781509	0.259288	SOX2.p2	BC101834|PTTG1|9232|pituitary tumor-transforming 1	BC112071|PTTG1|9232|pituitary tumor-transforming 1	AF075242|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr7_-_13997389_13997398	0.258985	SOX2.p2	NM_001163149|ETV1|2115|ets variant 1	X87175|ETV1|2115|ets variant 1
hg18_v1_chr12_-_14858358_14858382	0.258209	SOX2.p2	BC132752|C12orf69|440087|chromosome 12 open reading frame 69	BC132754|C12orf69|440087|chromosome 12 open reading frame 69	AK092637|C12orf69|440087|chromosome 12 open reading frame 69	NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69
hg18_v1_chr14_+_51525942_51526067	0.257776	SOX2.p2	AF087877|C14orf166|51637|chromosome 14 open reading frame 166	AF100755|C14orf166|51637|chromosome 14 open reading frame 166	AF151857|C14orf166|51637|chromosome 14 open reading frame 166	DQ525179|C14orf166|51637|chromosome 14 open reading frame 166	NM_016039|C14orf166|51637|chromosome 14 open reading frame 166	AK312004|C14orf166|51637|chromosome 14 open reading frame 166	CR606480|C14orf166|51637|chromosome 14 open reading frame 166	CR599997|C14orf166|51637|chromosome 14 open reading frame 166	BC001722|C14orf166|51637|chromosome 14 open reading frame 166	CR606481|C14orf166|51637|chromosome 14 open reading frame 166	CR611728|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr7_+_28418668_28418668	0.2575	SOX2.p2	L05515|CREB5|9586|cAMP responsive element binding protein 5	NM_182898|CREB5|9586|cAMP responsive element binding protein 5
hg18_v1_chr5_+_159781413_159781451	0.257456	SOX2.p2	AK312209|PTTG1|9232|pituitary tumor-transforming 1	AF062649|PTTG1|9232|pituitary tumor-transforming 1	BC026003|PTTG1|9232|pituitary tumor-transforming 1	NM_004219|PTTG1|9232|pituitary tumor-transforming 1	AF095287|PTTG1|9232|pituitary tumor-transforming 1
hg18_v1_chr12_+_67919619_67919693	0.257256	SOX2.p2	CR623508|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	CR601123|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa
hg18_v1_chr18_+_27281729_27281755	0.256949	SOX2.p2	AK290367|DSG3|1830|desmoglein 3	NM_001944|DSG3|1830|desmoglein 3	M76482|DSG3|1830|desmoglein 3
hg18_v1_chr5_-_138238877_138238886	0.256421	SOX2.p2	CR600503|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr10_-_18988172_18988234	0.256051	SOX2.p2	
hg18_v1_chr11_-_85108030_85108030	0.255961	SOX2.p2	NM_001162952|SYTL2|54843|synaptotagmin-like 2	NM_206930|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr6_-_123999640_123999844	0.255776	SOX2.p2	NM_006073|TRDN|10345|triadin	U18985|TRDN|10345|triadin	BC139910|TRDN|10345|triadin	AK291867|TRDN|10345|triadin	BC012590|TRDN|10345|triadin	BC029393|TRDN|10345|triadin	BC057222|TRDN|10345|triadin	BC070290|TRDN|10345|triadin	AJ489257|TRDN|10345|triadin	AK307619|TRDN|10345|triadin
hg18_v1_chr11_+_58980986_58981009	0.255273	SOX2.p2	BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6	NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6
hg18_v1_chr14_-_22515725_22515826	0.254983	SOX2.p2	AK025567|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr3_-_116348780_116348829	0.254787	SOX2.p2	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20	BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20	BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr2_+_200879040_200879649	0.254183	SOX2.p2	AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like
hg18_v1_chr14_+_38720085_38720227	0.25398	SOX2.p2	CR603037|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr7_+_20337249_20337270	0.25358	SOX2.p2	BC002630|ITGB8|3696|integrin, beta 8	NM_002214|ITGB8|3696|integrin, beta 8	M73780|ITGB8|3696|integrin, beta 8
hg18_v1_chr2_+_99320181_99320449	0.253541	SOX2.p2	NM_015904|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308175|EIF5B|9669|eukaryotic translation initiation factor 5B	AK308176|EIF5B|9669|eukaryotic translation initiation factor 5B	AB018284|EIF5B|9669|eukaryotic translation initiation factor 5B	AJ006776|EIF5B|9669|eukaryotic translation initiation factor 5B	AF078035|EIF5B|9669|eukaryotic translation initiation factor 5B	BC032639|EIF5B|9669|eukaryotic translation initiation factor 5B	BC022260|EIF5B|9669|eukaryotic translation initiation factor 5B	BC006970|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr1_+_81544432_81544599	0.253386	SOX2.p2	BC031321|LPHN2|23266|latrophilin 2	AK123422|LPHN2|23266|latrophilin 2
hg18_v1_chr6_-_134415311_134415481	0.252831	SOX2.p2	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12
hg18_v1_chr2_-_37752731_37753056	0.252733	SOX2.p2	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3
hg18_v1_chr3_+_157071173_157071353	0.251606	SOX2.p2	AK315832|GMPS|8833|guanine monphosphate synthetase	U10860|GMPS|8833|guanine monphosphate synthetase	DQ896621|GMPS|8833|guanine monphosphate synthetase	EU176462|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr19_-_44920451_44920507	0.2511	SOX2.p2	FJ613334|CLC|1178|Charcot-Leyden crystal protein	BC119711|CLC|1178|Charcot-Leyden crystal protein	BC119712|CLC|1178|Charcot-Leyden crystal protein	FJ613335|CLC|1178|Charcot-Leyden crystal protein	L01664|CLC|1178|Charcot-Leyden crystal protein	NM_001828|CLC|1178|Charcot-Leyden crystal protein
hg18_v1_chr10_-_74863303_74863375	0.250993	SOX2.p2	BC094693|ZMYND17|118490|zinc finger, MYND-type containing 17	AK309870|ZMYND17|118490|zinc finger, MYND-type containing 17	CR936824|ZMYND17|118490|zinc finger, MYND-type containing 17	AK096884|ZMYND17|118490|zinc finger, MYND-type containing 17	NM_001024593|ZMYND17|118490|zinc finger, MYND-type containing 17	BX537678|ZMYND17|118490|zinc finger, MYND-type containing 17
hg18_v1_chr18_+_3439972_3440218	0.250761	SOX2.p2	NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1	NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1	NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1	AK309471|TGIF1|7050|TGFB-induced factor homeobox 1	CR606247|TGIF1|7050|TGFB-induced factor homeobox 1	X89750|TGIF1|7050|TGFB-induced factor homeobox 1	CR614605|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr7_-_105106844_105106844	0.250613	SOX2.p2	AK300338|ATXN7L1|222255|ataxin 7-like 1	NM_138495|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr14_+_23175383_23175541	0.25043	SOX2.p2	CR610479|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR611371|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR624957|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR602571|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2	CR621782|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2
hg18_v1_chr6_+_7053863_7053942	0.250337	SOX2.p2	BX647723|RREB1|6239|ras responsive element binding protein 1
hg18_v1_chr12_+_79362256_79362256	0.250107	SOX2.p2	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q
hg18_v1_chr5_-_27074407_27074449	0.249988	SOX2.p2	BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)
hg18_v1_chr12_-_18782184_18782257	0.249768	SOX2.p2	AF532185|PLCZ1|89869|phospholipase C, zeta 1	NM_033123|PLCZ1|89869|phospholipase C, zeta 1	AK314516|PLCZ1|89869|phospholipase C, zeta 1	AY035866|PLCZ1|89869|phospholipase C, zeta 1	AK292279|PLCZ1|89869|phospholipase C, zeta 1
hg18_v1_chr18_+_3443771_3443771	0.249501	SOX2.p2	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1
hg18_v1_chr5_-_138238891_138238934	0.248701	SOX2.p2	AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2	AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr5_+_140460240_140460417	0.247405	SOX2.p2	AK313451|PCDHB3|56132|protocadherin beta 3	BC104817|PCDHB3|56132|protocadherin beta 3	AF152496|PCDHB3|56132|protocadherin beta 3	AF217755|PCDHB3|56132|protocadherin beta 3	NM_018937|PCDHB3|56132|protocadherin beta 3
hg18_v1_chr9_+_80134302_80134349	0.24681	SOX2.p2	CR619649|PSAT1|29968|phosphoserine aminotransferase 1
hg18_v1_chr11_+_4564596_4564596	0.246691	SOX2.p2	BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2
hg18_v1_chr3_+_173954940_173955053	0.246136	SOX2.p2	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene	AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene	NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene	DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene
hg18_v1_chrX_+_55951280_55951389	0.245807	SOX2.p2	
hg18_v1_chr5_+_65053749_65053956	0.245158	SOX2.p2	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)	AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)	AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)	AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)	BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)	BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)	AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)	AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)
hg18_v1_chr2_-_234317362_234317399	0.244369	SOX2.p2	BC024013|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	AY083665|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	BC017590|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3	NM_001001394|DNAJB3|414061|DnaJ (Hsp40) homolog, subfamily B, member 3
hg18_v1_chr6_+_153060722_153060874	0.244321	SOX2.p2	NM_025107|MYCT1|80177|myc target 1	AF527367|MYCT1|80177|myc target 1	AK024922|MYCT1|80177|myc target 1	BC128463|MYCT1|80177|myc target 1	BC128464|MYCT1|80177|myc target 1	GU997693|MYCT1|80177|myc target 1	AK021612|MYCT1|80177|myc target 1	BC022556|MYCT1|80177|myc target 1	CR599312|MYCT1|80177|myc target 1	AL834500|MYCT1|80177|myc target 1
hg18_v1_chr14_+_51526071_51526107	0.244283	SOX2.p2	CR594131|C14orf166|51637|chromosome 14 open reading frame 166	EU446806|C14orf166|51637|chromosome 14 open reading frame 166	AY817175|C14orf166|51637|chromosome 14 open reading frame 166
hg18_v1_chr12_+_32151351_32151530	0.244266	SOX2.p2	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)	AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)	NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)	U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)	BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)
hg18_v1_chr11_+_111313227_111313360	0.243636	SOX2.p2	BC035509|DIXDC1|85458|DIX domain containing 1	BC064479|DIXDC1|85458|DIX domain containing 1	BC128600|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr11_+_101488380_101488454	0.243226	SOX2.p2	NM_001195045|YAP1|10413|Yes-associated protein 1	AK316116|YAP1|10413|Yes-associated protein 1
hg18_v1_chr1_+_99884018_99884485	0.24306	SOX2.p2	NM_017734|PALMD|54873|palmdelphin	AF262379|PALMD|54873|palmdelphin	AL390971|PALMD|54873|palmdelphin	AJ312214|PALMD|54873|palmdelphin	BC012570|PALMD|54873|palmdelphin	AK000278|PALMD|54873|palmdelphin	AL390973|PALMD|54873|palmdelphin	CR624809|PALMD|54873|palmdelphin	CR603507|PALMD|54873|palmdelphin	AL390972|PALMD|54873|palmdelphin
hg18_v1_chr10_+_86121526_86121671	0.242951	SOX2.p2	AB032954|FAM190B|54462|family with sequence similarity 190, member B
hg18_v1_chr16_+_14201687_14201711	0.24251	SOX2.p2	BC047761|MKL2|57496|MKL/myocardin-like 2
hg18_v1_chr14_-_22516271_22516271	0.242392	SOX2.p2	AK096128|JUB|84962|jub, ajuba homolog (Xenopus laevis)	NM_198086|JUB|84962|jub, ajuba homolog (Xenopus laevis)
hg18_v1_chr3_+_190990142_190990283	0.242046	SOX2.p2	AK304127|TP63|8626|tumor protein p63	NM_001114980|TP63|8626|tumor protein p63	NM_001114981|TP63|8626|tumor protein p63	NM_001114982|TP63|8626|tumor protein p63	GQ202689|TP63|8626|tumor protein p63	GQ202690|TP63|8626|tumor protein p63	AF091627|TP63|8626|tumor protein p63	AB010153|TP63|8626|tumor protein p63	AB042841|TP63|8626|tumor protein p63	AF075429|TP63|8626|tumor protein p63	AF075431|TP63|8626|tumor protein p63	AF075433|TP63|8626|tumor protein p63
hg18_v1_chr2_-_50428395_50428457	0.242023	SOX2.p2	AF064842|NRXN1|9378|neurexin 1	NM_138735|NRXN1|9378|neurexin 1
hg18_v1_chr14_-_34252695_34252784	0.241284	SOX2.p2	BC011444|CFL2|1073|cofilin 2 (muscle)	AK314157|CFL2|1073|cofilin 2 (muscle)	NM_021914|CFL2|1073|cofilin 2 (muscle)	AF134802|CFL2|1073|cofilin 2 (muscle)
hg18_v1_chr11_-_4555625_4555626	0.240914	SOX2.p2	AF439154|C11orf40|143501|chromosome 11 open reading frame 40	NM_144663|C11orf40|143501|chromosome 11 open reading frame 40
hg18_v1_chr9_+_15412630_15412786	0.240768	SOX2.p2	BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr4_+_72321113_72321188	0.240382	SOX2.p2	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr4_+_159909626_159909631	0.24037	SOX2.p2	NM_020840|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr18_+_54039730_54039754	0.239326	SOX2.p2	AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr1_-_154318412_154318433	0.238713	SOX2.p2	AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)	NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)
hg18_v1_chr19_+_9157269_9157269	0.237747	SOX2.p2	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2
hg18_v1_chr15_+_64372686_64372713	0.237531	SOX2.p2	NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr2_-_21106291_21106305	0.237133	SOX2.p2	M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)
hg18_v1_chr12_+_123023521_123023844	0.236899	SOX2.p2	AL834266|ZNF664|144348|zinc finger protein 664	NM_152437|ZNF664|144348|zinc finger protein 664	BC051696|ZNF664|144348|zinc finger protein 664	BC037793|ZNF664|144348|zinc finger protein 664	BX647762|ZNF664|144348|zinc finger protein 664	AK056034|ZNF664|144348|zinc finger protein 664
hg18_v1_chr1_+_170768635_170768896	0.23676	SOX2.p2	AK302949|C1orf9|51430|chromosome 1 open reading frame 9	AJ250075|C1orf9|51430|chromosome 1 open reading frame 9	NM_014283|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr6_-_47361921_47361962	0.236747	SOX2.p2	BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr14_+_54046295_54046427	0.236453	SOX2.p2	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1	AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1	NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1	BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1	CR601996|CGRRF1|10668|cell growth regulator with ring finger domain 1	U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1	EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1	GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1
hg18_v1_chr5_-_114659863_114659885	0.236002	SOX2.p2	BC031242|CCDC112|153733|coiled-coil domain containing 112	NM_152549|CCDC112|153733|coiled-coil domain containing 112
hg18_v1_chr16_+_55523526_55523759	0.235306	SOX2.p2	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR625367|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr1_-_166149867_166150076	0.235183	SOX2.p2	BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)	BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)	AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)	AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)	AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)	AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)	AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)	NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)
hg18_v1_chr4_+_74491272_74491312	0.234517	SOX2.p2	CR610411|ALB|213|albumin	CR603329|ALB|213|albumin	CR596272|ALB|213|albumin	CR622692|ALB|213|albumin
hg18_v1_chr1_-_102234959_102235192	0.233714	SOX2.p2	EU176509|OLFM3|118427|olfactomedin 3	AF397394|OLFM3|118427|olfactomedin 3	AF397395|OLFM3|118427|olfactomedin 3	AF397396|OLFM3|118427|olfactomedin 3	AF397397|OLFM3|118427|olfactomedin 3	BC022531|OLFM3|118427|olfactomedin 3	AK095724|OLFM3|118427|olfactomedin 3
hg18_v1_chr1_+_170768914_170769094	0.233656	SOX2.p2	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9	AK302509|C1orf9|51430|chromosome 1 open reading frame 9	AL035291|C1orf9|51430|chromosome 1 open reading frame 9	BC137125|C1orf9|51430|chromosome 1 open reading frame 9	BC144487|C1orf9|51430|chromosome 1 open reading frame 9
hg18_v1_chr18_-_28247193_28247194	0.233656	SOX2.p2	
hg18_v1_chr2_+_208103001_208103051	0.232567	SOX2.p2	BC010636|CREB1|1385|cAMP responsive element binding protein 1	AK298740|CREB1|1385|cAMP responsive element binding protein 1
hg18_v1_chr6_+_28032997_28032997	0.232376	SOX2.p2	BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6	NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6
hg18_v1_chr5_-_16989371_16989400	0.232298	SOX2.p2	AB018342|MYO10|4651|myosin X	BC150285|MYO10|4651|myosin X	BC014956|MYO10|4651|myosin X	NM_012334|MYO10|4651|myosin X
hg18_v1_chr20_+_41519947_41520087	0.231726	SOX2.p2	AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6	AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6	AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6	CR605163|SRSF6|6431|serine/arginine-rich splicing factor 6	BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6	U30828|SRSF6|6431|serine/arginine-rich splicing factor 6	U30883|SRSF6|6431|serine/arginine-rich splicing factor 6	CR606848|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6	AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6
hg18_v1_chr12_-_94135154_94135581	0.23158	SOX2.p2	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6	NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6
hg18_v1_chr1_-_166965034_166965071	0.231485	SOX2.p2	CR591165|DPT|1805|dermatopontin	DQ892055|DPT|1805|dermatopontin	DQ895249|DPT|1805|dermatopontin	Z22865|DPT|1805|dermatopontin	CR614953|DPT|1805|dermatopontin	CR622672|DPT|1805|dermatopontin	BC033736|DPT|1805|dermatopontin	CR596260|DPT|1805|dermatopontin	NM_001937|DPT|1805|dermatopontin
hg18_v1_chr1_-_150564302_150564302	0.231457	SOX2.p2	L01090|FLG|2312|filaggrin	NM_002016|FLG|2312|filaggrin
hg18_v1_chr20_-_43440290_43440446	0.231421	SOX2.p2	BC036785|TP53TG5|27296|TP53 target 5	NM_014477|TP53TG5|27296|TP53 target 5	AB017802|TP53TG5|27296|TP53 target 5
hg18_v1_chr8_+_36760999_36761058	0.230027	SOX2.p2	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1	AK302391|KCNU1|157855|potassium channel, subfamily U, member 1	BC028701|KCNU1|157855|potassium channel, subfamily U, member 1
hg18_v1_chr1_+_165564904_165564941	0.229582	SOX2.p2	NM_001198783|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr13_+_77213295_77213519	0.229331	SOX2.p2	NM_144595|SLAIN1|122060|SLAIN motif family, member 1	AL834203|SLAIN1|122060|SLAIN motif family, member 1	AK289600|SLAIN1|122060|SLAIN motif family, member 1	BC045177|SLAIN1|122060|SLAIN motif family, member 1	AK289714|SLAIN1|122060|SLAIN motif family, member 1	AK295423|SLAIN1|122060|SLAIN motif family, member 1
hg18_v1_chr13_-_32678142_32678186	0.229081	SOX2.p2	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr18_-_24011349_24011442	0.229065	SOX2.p2	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr3_+_12305336_12305609	0.228682	SOX2.p2	AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma	AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma	NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma	CR609454|PPARG|5468|peroxisome proliferator-activated receptor gamma	BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma	AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma
hg18_v1_chr1_+_25629968_25630176	0.228326	SOX2.p2	AK311472|TMEM57|55219|transmembrane protein 57	NM_018202|TMEM57|55219|transmembrane protein 57	AY845015|TMEM57|55219|transmembrane protein 57	BC007687|TMEM57|55219|transmembrane protein 57	AK001609|TMEM57|55219|transmembrane protein 57	AY845035|TMEM57|55219|transmembrane protein 57	AY845036|TMEM57|55219|transmembrane protein 57	BC032427|TMEM57|55219|transmembrane protein 57	BC020801|TMEM57|55219|transmembrane protein 57
hg18_v1_chr1_+_199259664_199259757	0.228115	SOX2.p2	
hg18_v1_chr6_+_123359278_123359280	0.228054	SOX2.p2	BC101377|CLVS2|134829|clavesin 2	BC101376|CLVS2|134829|clavesin 2	NM_001010852|CLVS2|134829|clavesin 2
hg18_v1_chr9_-_14858974_14859024	0.227657	SOX2.p2	AB160987|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr10_-_113933457_113933534	0.227279	SOX2.p2	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial
hg18_v1_chr20_-_20641122_20641334	0.226174	SOX2.p2	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)	NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)
hg18_v1_chr12_+_58369392_58369421	0.22612	SOX2.p2	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)	AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)
hg18_v1_chr10_+_97461525_97461525	0.226013	SOX2.p2	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1	NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1
hg18_v1_chr6_-_130072971_130073068	0.225749	SOX2.p2	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18	BC017223|ARHGAP18|93663|Rho GTPase activating protein 18	BC039611|ARHGAP18|93663|Rho GTPase activating protein 18	AL834511|ARHGAP18|93663|Rho GTPase activating protein 18	BC073143|ARHGAP18|93663|Rho GTPase activating protein 18	BC107416|ARHGAP18|93663|Rho GTPase activating protein 18	BC101708|ARHGAP18|93663|Rho GTPase activating protein 18	BC111940|ARHGAP18|93663|Rho GTPase activating protein 18	BC143531|ARHGAP18|93663|Rho GTPase activating protein 18	AK098594|ARHGAP18|93663|Rho GTPase activating protein 18	AY643712|ARHGAP18|93663|Rho GTPase activating protein 18	NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18
hg18_v1_chr6_+_84626146_84626220	0.224906	SOX2.p2	AM393033|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr7_+_77005287_77005321	0.22462	SOX2.p2	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12
hg18_v1_chr5_+_149845503_149845761	0.224471	SOX2.p2	AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg18_v1_chr1_+_153366559_153366572	0.22436	SOX2.p2	AK057845|EFNA1|1942|ephrin-A1
hg18_v1_chr1_+_109221124_109221144	0.223874	SOX2.p2	AB445462|GPSM2|29899|G-protein signaling modulator 2	NM_013296|GPSM2|29899|G-protein signaling modulator 2	AK314249|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr7_+_20653490_20653742	0.223639	SOX2.p2	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	CR595059|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg18_v1_chr12_+_47162552_47162552	0.222678	SOX2.p2	NM_152319|C12orf54|121273|chromosome 12 open reading frame 54
hg18_v1_chr1_-_153444304_153444342	0.22205	SOX2.p2	CR590329|THBS3|7059|thrombospondin 3	AK223278|THBS3|7059|thrombospondin 3	L38969|THBS3|7059|thrombospondin 3	AK298803|THBS3|7059|thrombospondin 3	BC113846|THBS3|7059|thrombospondin 3	BC113847|THBS3|7059|thrombospondin 3	NM_007112|THBS3|7059|thrombospondin 3	AK298592|THBS3|7059|thrombospondin 3	AK314337|THBS3|7059|thrombospondin 3
hg18_v1_chr9_-_73715666_73715825	0.221792	SOX2.p2	AF151825|FAM108B1|51104|family with sequence similarity 108, member B1
hg18_v1_chr12_+_22669275_22669345	0.221725	SOX2.p2	AF207600|ETNK1|55500|ethanolamine kinase 1	BC066907|ETNK1|55500|ethanolamine kinase 1	NM_001039481|ETNK1|55500|ethanolamine kinase 1	NM_018638|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr14_+_38719462_38719593	0.221695	SOX2.p2	AK304622|PNN|5411|pinin, desmosome associated protein
hg18_v1_chr2_-_215955206_215955292	0.221178	SOX2.p2	M14059|FN1|2335|fibronectin 1	M10905|FN1|2335|fibronectin 1
hg18_v1_chr2_+_208284691_208284800	0.221025	SOX2.p2	BC067253|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr2_-_213723298_213723302	0.220595	SOX2.p2	AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)
hg18_v1_chr2_+_10009242_10009361	0.220528	SOX2.p2	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)	AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)	AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)	BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)
hg18_v1_chr3_+_73128771_73128849	0.220513	SOX2.p2	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr20_+_30409649_30410014	0.220513	SOX2.p2	NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)	NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)	BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)	AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)
hg18_v1_chr14_-_23623657_23623673	0.220235	SOX2.p2	M95925|NRL|4901|neural retina leucine zipper	M81840|NRL|4901|neural retina leucine zipper	NM_006177|NRL|4901|neural retina leucine zipper	BC012395|NRL|4901|neural retina leucine zipper
hg18_v1_chrX_+_135407336_135407509	0.220139	SOX2.p2	BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1	AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1	AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1	U76992|HTATSF1|27336|HIV-1 Tat specific factor 1	EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1	BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr12_-_43731148_43731150	0.220074	SOX2.p2	AK131230|DBX2|440097|developing brain homeobox 2	NM_001004329|DBX2|440097|developing brain homeobox 2
hg18_v1_chr6_+_135544214_135544344	0.22001	SOX2.p2	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr2_-_207738858_207738944	0.219817	SOX2.p2	AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)
hg18_v1_chr15_+_100163424_100163445	0.219508	SOX2.p2	BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6
hg18_v1_chr7_-_13997574_13997574	0.219424	SOX2.p2	NM_001163148|ETV1|2115|ets variant 1
hg18_v1_chr7_+_26208532_26208632	0.219305	SOX2.p2	
hg18_v1_chr7_+_73506047_73506154	0.218272	SOX2.p2	AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1	NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1
hg18_v1_chr2_-_39310176_39310240	0.218115	SOX2.p2	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4	AY847283|CDKL4|344387|cyclin-dependent kinase-like 4	NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4	BC144460|CDKL4|344387|cyclin-dependent kinase-like 4
hg18_v1_chr3_-_127138571_127138576	0.218032	SOX2.p2	BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like	NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like
hg18_v1_chr15_+_66133625_66133708	0.217714	SOX2.p2	AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1	NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1	BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1	BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1	AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1	BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr2_+_178767317_178767623	0.21742	SOX2.p2	AB208898|OSBPL6|114880|oxysterol binding protein-like 6	BC052259|OSBPL6|114880|oxysterol binding protein-like 6	AK300389|OSBPL6|114880|oxysterol binding protein-like 6	NM_032523|OSBPL6|114880|oxysterol binding protein-like 6	AF323728|OSBPL6|114880|oxysterol binding protein-like 6	AF392448|OSBPL6|114880|oxysterol binding protein-like 6
hg18_v1_chr4_+_74493918_74494032	0.216585	SOX2.p2	CR617604|ALB|213|albumin	CR596833|ALB|213|albumin	CR615141|ALB|213|albumin	CR606456|ALB|213|albumin	CR594508|ALB|213|albumin	CR592047|ALB|213|albumin	CR596480|ALB|213|albumin
hg18_v1_chr18_-_28247186_28247192	0.21655	SOX2.p2	
hg18_v1_chr20_+_254205_254268	0.216371	SOX2.p2	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12	NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12	U35612|SOX12|6666|SRY (sex determining region Y)-box 12	BC028103|SOX12|6666|SRY (sex determining region Y)-box 12
hg18_v1_chr2_+_196230096_196230210	0.215916	SOX2.p2	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr17_+_64922420_64922522	0.214734	SOX2.p2	AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6	NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6	U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6	AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6	X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR616398|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR624804|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR625265|MAP2K6|5608|mitogen-activated protein kinase kinase 6	CR604345|MAP2K6|5608|mitogen-activated protein kinase kinase 6	BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6
hg18_v1_chr11_+_111313067_111313170	0.214536	SOX2.p2	DQ642016|DIXDC1|85458|DIX domain containing 1	NM_001037954|DIXDC1|85458|DIX domain containing 1
hg18_v1_chr6_+_88024152_88024156	0.214451	SOX2.p2	BC016386|ZNF292|23036|zinc finger protein 292
hg18_v1_chr4_+_114190233_114190333	0.212704	SOX2.p2	NM_001148|ANK2|287|ankyrin 2, neuronal	NM_020977|ANK2|287|ankyrin 2, neuronal	AK299767|ANK2|287|ankyrin 2, neuronal	AK307601|ANK2|287|ankyrin 2, neuronal	X56958|ANK2|287|ankyrin 2, neuronal	Z26634|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr2_-_110665188_110665188	0.212562	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr9_-_126945536_126945689	0.212512	SOX2.p2	BC104030|SCAI|286205|suppressor of cancer cell invasion	BC104031|SCAI|286205|suppressor of cancer cell invasion	BC104032|SCAI|286205|suppressor of cancer cell invasion	AK098024|SCAI|286205|suppressor of cancer cell invasion	AK093983|SCAI|286205|suppressor of cancer cell invasion	NM_001144877|SCAI|286205|suppressor of cancer cell invasion	NM_173690|SCAI|286205|suppressor of cancer cell invasion
hg18_v1_chr5_+_76470829_76470856	0.212326	SOX2.p2	
hg18_v1_chr15_+_76517532_76517621	0.212046	SOX2.p2	NM_004136|IREB2|3658|iron-responsive element binding protein 2
hg18_v1_chr4_-_184480572_184480572	0.212018	SOX2.p2	NM_001185149|CLDN24|100132463|claudin 24
hg18_v1_chr17_+_74542066_74542169	0.211978	SOX2.p2	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1
hg18_v1_chr6_-_56824672_56824674	0.211854	SOX2.p2	AK299898|DST|667|dystonin
hg18_v1_chr15_+_54998144_54998177	0.211785	SOX2.p2	AL831981|TCF12|6938|transcription factor 12	AK294617|TCF12|6938|transcription factor 12	AK310708|TCF12|6938|transcription factor 12	AK312710|TCF12|6938|transcription factor 12
hg18_v1_chr3_+_176059763_176059805	0.211522	SOX2.p2	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2
hg18_v1_chr2_-_215953818_215953973	0.211471	SOX2.p2	U60067|FN1|2335|fibronectin 1	U60068|FN1|2335|fibronectin 1
hg18_v1_chr5_-_39238818_39238931	0.211289	SOX2.p2	AF198052|FYB|2533|FYN binding protein	U93049|FYB|2533|FYN binding protein	AF001862|FYB|2533|FYN binding protein
hg18_v1_chr2_+_181553613_181553650	0.211186	SOX2.p2	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR616134|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr2_+_185171682_185171793	0.21103	SOX2.p2	BC136602|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr14_-_30565275_30565368	0.210812	SOX2.p2	BC126221|STRN3|29966|striatin, calmodulin binding protein 3	BC132673|STRN3|29966|striatin, calmodulin binding protein 3	BC143933|STRN3|29966|striatin, calmodulin binding protein 3	AK314041|STRN3|29966|striatin, calmodulin binding protein 3	AK290229|STRN3|29966|striatin, calmodulin binding protein 3	U17989|STRN3|29966|striatin, calmodulin binding protein 3	NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3	NM_014574|STRN3|29966|striatin, calmodulin binding protein 3
hg18_v1_chr7_-_128203079_128203079	0.210688	SOX2.p2	DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive	NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive
hg18_v1_chr2_+_10180145_10180275	0.210679	SOX2.p2	NM_001165931|RRM2|6241|ribonucleotide reductase M2	S40301|RRM2|6241|ribonucleotide reductase M2	X59618|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr5_-_41107161_41107200	0.210181	SOX2.p2	BC052962|HEATR7B2|133558|HEAT repeat family member 7B2	BC034600|HEATR7B2|133558|HEAT repeat family member 7B2	NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2
hg18_v1_chr15_+_91244422_91244559	0.210086	SOX2.p2	AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2	NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2	AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2	BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr12_-_30721410_30721444	0.209854	SOX2.p2	AK302260|IPO8|10526|importin 8	NM_001190995|IPO8|10526|importin 8
hg18_v1_chr12_-_11066436_11066485	0.209534	SOX2.p2	NM_176888|TAS2R19|259294|taste receptor, type 2, member 19	BC101804|TAS2R19|259294|taste receptor, type 2, member 19	BC111998|TAS2R19|259294|taste receptor, type 2, member 19
hg18_v1_chr5_-_33928049_33928055	0.208984	SOX2.p2	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr6_+_14033402_14033442	0.20896	SOX2.p2	NM_001165033|RNF182|221687|ring finger protein 182	AK090576|RNF182|221687|ring finger protein 182
hg18_v1_chr12_+_99185334_99185679	0.208905	SOX2.p2	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)
hg18_v1_chr10_+_69314944_69314966	0.208823	SOX2.p2	AK289743|SIRT1|23411|sirtuin 1	NM_001142498|SIRT1|23411|sirtuin 1
hg18_v1_chr15_+_66133709_66133721	0.208241	SOX2.p2	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1	AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1	EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1	FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1	AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1
hg18_v1_chr9_+_108665168_108665202	0.208144	SOX2.p2	BX648965|ZNF462|58499|zinc finger protein 462	NM_021224|ZNF462|58499|zinc finger protein 462	AK127803|ZNF462|58499|zinc finger protein 462
hg18_v1_chr6_+_27400518_27400556	0.208142	SOX2.p2	AF352327|FKSG83|83954|FKSG83	AF336874|FKSG83|83954|FKSG83	BC107050|FKSG83|83954|FKSG83	NM_032030|FKSG83|83954|FKSG83
hg18_v1_chr14_-_94677807_94677807	0.207414	SOX2.p2	AB028449|DICER1|23405|dicer 1, ribonuclease type III	NM_030621|DICER1|23405|dicer 1, ribonuclease type III
hg18_v1_chr1_-_202730135_202730642	0.207109	SOX2.p2	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide
hg18_v1_chr12_-_41164010_41164041	0.207101	SOX2.p2	AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr4_+_183302105_183302133	0.206859	SOX2.p2	AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)
hg18_v1_chr4_+_159909658_159909813	0.206324	SOX2.p2	AB040883|FNIP2|57600|folliculin interacting protein 2	AL713802|FNIP2|57600|folliculin interacting protein 2
hg18_v1_chr11_-_84311867_84311894	0.206148	SOX2.p2	AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)	BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr8_-_93176618_93176665	0.206059	SOX2.p2	BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	CR619328|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr2_+_181553333_181553608	0.206052	SOX2.p2	NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR624412|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR607535|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR622410|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	CR621773|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)	NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast)
hg18_v1_chr12_-_11313907_11313907	0.205901	SOX2.p2	BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3	BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3	NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3
hg18_v1_chr12_+_77963563_77963602	0.205865	SOX2.p2	CR627387|SYT1|6857|synaptotagmin I	NM_001135806|SYT1|6857|synaptotagmin I	AK308743|SYT1|6857|synaptotagmin I
hg18_v1_chr10_+_112317401_112317563	0.205846	SOX2.p2	NM_005445|SMC3|9126|structural maintenance of chromosomes 3	AK315845|SMC3|9126|structural maintenance of chromosomes 3	AK289771|SMC3|9126|structural maintenance of chromosomes 3	AF020043|SMC3|9126|structural maintenance of chromosomes 3	BC047324|SMC3|9126|structural maintenance of chromosomes 3
hg18_v1_chr18_-_3864252_3864316	0.205844	SOX2.p2	AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1
hg18_v1_chr13_+_81162030_81162069	0.205471	SOX2.p2	
hg18_v1_chr6_-_136829705_136829705	0.20528	SOX2.p2	AK299355|MAP7|9053|microtubule-associated protein 7	NM_001198615|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr17_+_70964258_70964408	0.205195	SOX2.p2	NM_014738|KIAA0195|9772|KIAA0195	AK308160|KIAA0195|9772|KIAA0195	BC042942|KIAA0195|9772|KIAA0195	AK304819|KIAA0195|9772|KIAA0195	D83779|KIAA0195|9772|KIAA0195	BC045540|KIAA0195|9772|KIAA0195
hg18_v1_chr17_+_25730107_25730124	0.204959	SOX2.p2	NM_001304|CPD|1362|carboxypeptidase D	U65090|CPD|1362|carboxypeptidase D
hg18_v1_chr6_+_72983183_72983183	0.20482	SOX2.p2	AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr3_+_157071141_157071157	0.204431	SOX2.p2	AK291504|GMPS|8833|guanine monphosphate synthetase	BC012178|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr17_+_52689372_52689372	0.204405	SOX2.p2	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)	NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr6_-_56824371_56824452	0.204182	SOX2.p2	AK294830|DST|667|dystonin
hg18_v1_chr2_+_208284610_208284670	0.204033	SOX2.p2	BC047293|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr2_-_70329067_70329379	0.203784	SOX2.p2	BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein	AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein
hg18_v1_chr1_+_165565006_165565121	0.20372	SOX2.p2	AY113189|POU2F1|5451|POU class 2 homeobox 1	BC001664|POU2F1|5451|POU class 2 homeobox 1	BC003571|POU2F1|5451|POU class 2 homeobox 1
hg18_v1_chr12_+_68265714_68265919	0.203091	SOX2.p2	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr11_+_125001521_125001546	0.202676	SOX2.p2	NM_001274|CHEK1|1111|CHK1 checkpoint homolog (S. pombe)	BC017575|CHEK1|1111|CHK1 checkpoint homolog (S. pombe)
hg18_v1_chr17_-_36792161_36792180	0.202586	SOX2.p2	NM_021013|KRT34|3885|keratin 34	BC041070|KRT34|3885|keratin 34
hg18_v1_chr14_+_22911857_22912167	0.202529	SOX2.p2	AF461739|IL25|64806|interleukin 25	NM_172314|IL25|64806|interleukin 25	AF305200|IL25|64806|interleukin 25	AY359127|IL25|64806|interleukin 25	NM_022789|IL25|64806|interleukin 25	BC104929|IL25|64806|interleukin 25	BC104931|IL25|64806|interleukin 25	AF458059|IL25|64806|interleukin 25	BC069565|IL25|64806|interleukin 25	EU831823|IL25|64806|interleukin 25	EU831900|IL25|64806|interleukin 25
hg18_v1_chr1_+_116727514_116727514	0.202427	SOX2.p2	AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide
hg18_v1_chr6_+_41148691_41148710	0.202294	SOX2.p2	X59711|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr1_+_181028016_181028016	0.202202	SOX2.p2	AF338436|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
hg18_v1_chr16_+_24696069_24696181	0.202172	SOX2.p2	AY035864|TNRC6A|27327|trinucleotide repeat containing 6A
hg18_v1_chr20_-_41788975_41789055	0.202118	SOX2.p2	CR613553|GTSF1L|149699|gametocyte specific factor 1-like	BC040049|GTSF1L|149699|gametocyte specific factor 1-like	AK058060|GTSF1L|149699|gametocyte specific factor 1-like	NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like	NM_176791|GTSF1L|149699|gametocyte specific factor 1-like
hg18_v1_chr8_+_64243741_64243767	0.201945	SOX2.p2	AL831816|YTHDF3|253943|YTH domain family, member 3	AK056219|YTHDF3|253943|YTH domain family, member 3	BC037492|YTHDF3|253943|YTH domain family, member 3	AL832335|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr9_+_96807107_96807126	0.201848	SOX2.p2	CR626738|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr17_+_24394281_24394369	0.201465	SOX2.p2	AK022773|PIPOX|51268|pipecolic acid oxidase	BC027622|PIPOX|51268|pipecolic acid oxidase	AK027498|PIPOX|51268|pipecolic acid oxidase	AF134593|PIPOX|51268|pipecolic acid oxidase	AF136970|PIPOX|51268|pipecolic acid oxidase	DQ896538|PIPOX|51268|pipecolic acid oxidase	EU176447|PIPOX|51268|pipecolic acid oxidase	CR457155|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr10_+_69314714_69314882	0.200986	SOX2.p2	AL136741|SIRT1|23411|sirtuin 1	BC012499|SIRT1|23411|sirtuin 1
hg18_v1_chr9_+_15412862_15412874	0.200257	SOX2.p2	BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr13_-_45087859_45087874	0.200033	SOX2.p2	BC131494|FAM194B|220081|family with sequence similarity 194, member B	AK057244|FAM194B|220081|family with sequence similarity 194, member B	NM_182542|FAM194B|220081|family with sequence similarity 194, member B
hg18_v1_chr11_-_75833337_75833395	0.199943	SOX2.p2	
hg18_v1_chr6_+_29472310_29472455	0.199652	SOX2.p2	AJ459861|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101742|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC101746|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	NM_013936|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2	BC069123|OR12D2|26529|olfactory receptor, family 12, subfamily D, member 2
hg18_v1_chr4_-_76868581_76868818	0.199089	SOX2.p2	
hg18_v1_chr16_+_65620715_65620864	0.198962	SOX2.p2	AK290462|CBFB|865|core-binding factor, beta subunit	AK291834|CBFB|865|core-binding factor, beta subunit	AF294326|CBFB|865|core-binding factor, beta subunit	BT006862|CBFB|865|core-binding factor, beta subunit	DQ890558|CBFB|865|core-binding factor, beta subunit	DQ893719|CBFB|865|core-binding factor, beta subunit	L20298|CBFB|865|core-binding factor, beta subunit	AK311724|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr2_+_208284484_208284609	0.198508	SOX2.p2	AK097751|CCNYL1|151195|cyclin Y-like 1	NM_001142300|CCNYL1|151195|cyclin Y-like 1	NM_152523|CCNYL1|151195|cyclin Y-like 1
hg18_v1_chr8_+_74369647_74369999	0.198384	SOX2.p2	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)	NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)	BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)	AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)
hg18_v1_chr2_+_148319033_148319191	0.198053	SOX2.p2	D31770|ACVR2A|92|activin A receptor, type IIA	BC069707|ACVR2A|92|activin A receptor, type IIA	NM_001616|ACVR2A|92|activin A receptor, type IIA	X62381|ACVR2A|92|activin A receptor, type IIA	BC067416|ACVR2A|92|activin A receptor, type IIA	BC067417|ACVR2A|92|activin A receptor, type IIA	BC067418|ACVR2A|92|activin A receptor, type IIA	X63128|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr1_-_180624380_180624393	0.197989	SOX2.p2	BC127883|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr7_-_83662152_83662365	0.197641	SOX2.p2	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg18_v1_chr4_-_139382672_139382956	0.197541	SOX2.p2	AJ277882|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB040875|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	BC012087|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK314855|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF252872|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AB026891|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AF200708|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	AK290359|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11	NM_014331|SLC7A11|23657|solute carrier family 7, (cationic amino acid transporter, y+ system) member 11
hg18_v1_chr10_+_105717459_105717495	0.197106	SOX2.p2	AF273048|SLK|9748|STE20-like kinase	NM_014720|SLK|9748|STE20-like kinase	BC111565|SLK|9748|STE20-like kinase	BC008697|SLK|9748|STE20-like kinase
hg18_v1_chr21_+_33936494_33936956	0.196519	SOX2.p2	AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)	NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)	AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)	DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)	EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)	BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr5_+_27508139_27508182	0.196183	SOX2.p2	BC039509|LOC643401|643401|hypothetical protein LOC643401	BC046201|LOC643401|643401|hypothetical protein LOC643401
hg18_v1_chr10_+_102096761_102096902	0.196082	SOX2.p2	NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)
hg18_v1_chr1_-_151280201_151280218	0.196074	SOX2.p2	BC093801|SPRR2D|6703|small proline-rich protein 2D	BC093803|SPRR2D|6703|small proline-rich protein 2D	BC120938|SPRR2D|6703|small proline-rich protein 2D	M21302|SPRR2D|6703|small proline-rich protein 2D	NM_006945|SPRR2D|6703|small proline-rich protein 2D	AK291317|SPRR2D|6703|small proline-rich protein 2D
hg18_v1_chr10_-_98263434_98263672	0.195923	SOX2.p2	BC113577|TLL2|7093|tolloid-like 2	BC112341|TLL2|7093|tolloid-like 2	BC112366|TLL2|7093|tolloid-like 2	AB023149|TLL2|7093|tolloid-like 2	BC013871|TLL2|7093|tolloid-like 2	BC030548|TLL2|7093|tolloid-like 2	AK026106|TLL2|7093|tolloid-like 2	NM_012465|TLL2|7093|tolloid-like 2
hg18_v1_chr20_+_9406460_9406567	0.1956	SOX2.p2	AK057634|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr8_+_107529327_107529327	0.195145	SOX2.p2	AK296561|OXR1|55074|oxidation resistance 1	NM_001198532|OXR1|55074|oxidation resistance 1
hg18_v1_chr16_-_45562840_45562859	0.19504	SOX2.p2	Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2
hg18_v1_chr10_+_118340460_118340631	0.194627	SOX2.p2	BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1	CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1	M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1	NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1	AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1	BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1
hg18_v1_chr4_-_20594645_20594809	0.194597	SOX2.p2	DQ148492|KCNIP4|80333|Kv channel interacting protein 4	AK294188|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr5_-_138238953_138238963	0.194215	SOX2.p2	NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2
hg18_v1_chr7_-_117300702_117300732	0.194211	SOX2.p2	AB051545|CTTNBP2|83992|cortactin binding protein 2	AK308081|CTTNBP2|83992|cortactin binding protein 2	AK091548|CTTNBP2|83992|cortactin binding protein 2
hg18_v1_chr12_-_44644216_44644239	0.194183	SOX2.p2	
hg18_v1_chr5_+_161208119_161208146	0.193662	SOX2.p2	NM_001127645|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	BC030696|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr12_-_41164052_41164081	0.193528	SOX2.p2	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)	NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)
hg18_v1_chr17_+_25730048_25730083	0.193484	SOX2.p2	BC051702|CPD|1362|carboxypeptidase D	BC045549|CPD|1362|carboxypeptidase D	BC054116|CPD|1362|carboxypeptidase D
hg18_v1_chr3_-_121652183_121652872	0.193381	SOX2.p2	BC000055|FSTL1|11167|follistatin-like 1	U06863|FSTL1|11167|follistatin-like 1	AK300356|FSTL1|11167|follistatin-like 1	AK289388|FSTL1|11167|follistatin-like 1	AK291138|FSTL1|11167|follistatin-like 1	AK311050|FSTL1|11167|follistatin-like 1	AK300436|FSTL1|11167|follistatin-like 1	BX647421|FSTL1|11167|follistatin-like 1	AK312261|FSTL1|11167|follistatin-like 1	NM_007085|FSTL1|11167|follistatin-like 1
hg18_v1_chr12_+_63090008_63090082	0.193345	SOX2.p2	BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)
hg18_v1_chr6_-_151754337_151754470	0.193134	SOX2.p2	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2	NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2	AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2	AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2
hg18_v1_chr7_+_104539548_104539681	0.19285	SOX2.p2	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)
hg18_v1_chr2_+_152899837_152899996	0.192797	SOX2.p2	NM_052905|FMNL2|114793|formin-like 2
hg18_v1_chr12_-_21980894_21980894	0.192395	SOX2.p2	NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_020298|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg18_v1_chr16_-_19440786_19440969	0.192379	SOX2.p2	AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR624901|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR590251|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605351|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR607083|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR605785|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR612471|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1	BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR591783|GDE1|51573|glycerophosphodiester phosphodiesterase 1	CR620034|GDE1|51573|glycerophosphodiester phosphodiesterase 1	AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1	NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1
hg18_v1_chr7_+_93373755_93373755	0.192031	SOX2.p2	BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg18_v1_chr1_+_167342149_167342306	0.191616	SOX2.p2	CR596103|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide
hg18_v1_chr17_+_59205244_59205264	0.19151	SOX2.p2	
hg18_v1_chr12_+_68265535_68265553	0.191121	SOX2.p2	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chr10_+_18988282_18988572	0.191103	SOX2.p2	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B	BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B	AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B	AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B	DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B
hg18_v1_chr4_-_165523856_165523856	0.190729	SOX2.p2	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1
hg18_v1_chr1_-_180624494_180624558	0.190648	SOX2.p2	AY486122|GLUL|2752|glutamate-ammonia ligase	S70290|GLUL|2752|glutamate-ammonia ligase	DQ893278|GLUL|2752|glutamate-ammonia ligase	DQ896609|GLUL|2752|glutamate-ammonia ligase	EU832658|GLUL|2752|glutamate-ammonia ligase	EU832735|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr2_+_210152609_210152669	0.190437	SOX2.p2	NM_002374|MAP2|4133|microtubule-associated protein 2	NM_031845|MAP2|4133|microtubule-associated protein 2	NM_031847|MAP2|4133|microtubule-associated protein 2	U01828|MAP2|4133|microtubule-associated protein 2	AK307603|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr11_+_6898780_6898808	0.190028	SOX2.p2	BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3	NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3
hg18_v1_chr4_-_106849252_106849329	0.189983	SOX2.p2	BC014442|INTS12|57117|integrator complex subunit 12	AK314939|INTS12|57117|integrator complex subunit 12	NM_001142471|INTS12|57117|integrator complex subunit 12	NM_020395|INTS12|57117|integrator complex subunit 12
hg18_v1_chr15_+_49760841_49761005	0.189602	SOX2.p2	AF453583|SCG3|29106|secretogranin III	NM_001165257|SCG3|29106|secretogranin III	NM_013243|SCG3|29106|secretogranin III	AF078851|SCG3|29106|secretogranin III	AY359093|SCG3|29106|secretogranin III	AK075314|SCG3|29106|secretogranin III	AK296466|SCG3|29106|secretogranin III	AK290175|SCG3|29106|secretogranin III
hg18_v1_chr11_-_123182266_123182304	0.189466	SOX2.p2	NM_001005325|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1	BC136929|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1	BC136931|OR6M1|390261|olfactory receptor, family 6, subfamily M, member 1
hg18_v1_chr5_+_121493113_121493176	0.189419	SOX2.p2	AK057483|ZNF474|133923|zinc finger protein 474	AY461732|ZNF474|133923|zinc finger protein 474	NM_207317|ZNF474|133923|zinc finger protein 474	AK290985|ZNF474|133923|zinc finger protein 474
hg18_v1_chr9_+_15412875_15412949	0.189271	SOX2.p2	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	CR624760|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa
hg18_v1_chr12_-_11399776_11399791	0.188985	SOX2.p2	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1	K03205|PRB1|5542|proline-rich protein BstNI subfamily 1	K03206|PRB1|5542|proline-rich protein BstNI subfamily 1	BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1	K03204|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1	NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1
hg18_v1_chr21_+_36364168_36364288	0.188137	SOX2.p2	CR594171|CBR1|873|carbonyl reductase 1	CR605960|CBR1|873|carbonyl reductase 1	AK294142|CBR1|873|carbonyl reductase 1	J04056|CBR1|873|carbonyl reductase 1	AK308691|CBR1|873|carbonyl reductase 1	AK311219|CBR1|873|carbonyl reductase 1	BC015640|CBR1|873|carbonyl reductase 1	AK314879|CBR1|873|carbonyl reductase 1	CR607402|CBR1|873|carbonyl reductase 1	BC002511|CBR1|873|carbonyl reductase 1	DQ892353|CBR1|873|carbonyl reductase 1	DQ895559|CBR1|873|carbonyl reductase 1	BT019843|CBR1|873|carbonyl reductase 1	CR541708|CBR1|873|carbonyl reductase 1	CR604950|CBR1|873|carbonyl reductase 1
hg18_v1_chr2_+_104838177_104838483	0.187759	SOX2.p2	NM_006236|POU3F3|5455|POU class 3 homeobox 3
hg18_v1_chr12_+_54106304_54106304	0.187261	SOX2.p2	NM_001005183|OR6C76|390326|olfactory receptor, family 6, subfamily C, member 76
hg18_v1_chrX_+_70419766_70419766	0.187203	SOX2.p2	NM_001145408|NONO|4841|non-POU domain containing, octamer-binding	NM_001145409|NONO|4841|non-POU domain containing, octamer-binding	NM_001145410|NONO|4841|non-POU domain containing, octamer-binding	NM_007363|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr1_+_61642287_61642335	0.186952	SOX2.p2	AK024964|NFIA|4774|nuclear factor I/A
hg18_v1_chr6_+_37245860_37246341	0.186905	SOX2.p2	NM_002648|PIM1|5292|pim-1 oncogene	M54915|PIM1|5292|pim-1 oncogene	BC020224|PIM1|5292|pim-1 oncogene	CR591847|PIM1|5292|pim-1 oncogene	M24779|PIM1|5292|pim-1 oncogene	M16750|PIM1|5292|pim-1 oncogene	AK301158|PIM1|5292|pim-1 oncogene
hg18_v1_chr4_-_153523113_153523116	0.186775	SOX2.p2	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7	AY008274|FBXW7|55294|F-box and WD repeat domain containing 7
hg18_v1_chr11_-_6773589_6773714	0.186461	SOX2.p2	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2
hg18_v1_chr8_-_125785611_125785615	0.18612	SOX2.p2	U50573|MTSS1|9788|metastasis suppressor 1
hg18_v1_chr8_+_26491838_26491851	0.185917	SOX2.p2	AK299077|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr15_+_91244563_91244606	0.185485	SOX2.p2	BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2	BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr3_+_153469206_153469405	0.185439	SOX2.p2	CR603447|MBNL1|4154|muscleblind-like (Drosophila)
hg18_v1_chr3_+_2528272_2528289	0.184803	SOX2.p2	AK095729|CNTN4|152330|contactin 4
hg18_v1_chr3_+_134976965_134976967	0.184421	SOX2.p2	U88581|TF|7018|transferrin
hg18_v1_chr1_-_151352587_151352612	0.184032	SOX2.p2	BC096108|SPRR2A|6700|small proline-rich protein 2A	BC096109|SPRR2A|6700|small proline-rich protein 2A	BC096110|SPRR2A|6700|small proline-rich protein 2A	BC096111|SPRR2A|6700|small proline-rich protein 2A	NM_001014450|SPRR2F|6705|small proline-rich protein 2F
hg18_v1_chr6_+_64344307_64344831	0.183776	SOX2.p2	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1
hg18_v1_chr3_+_157071117_157071139	0.183245	SOX2.p2	AK302148|GMPS|8833|guanine monphosphate synthetase	AK223399|GMPS|8833|guanine monphosphate synthetase	AK300787|GMPS|8833|guanine monphosphate synthetase
hg18_v1_chr10_+_63331018_63331018	0.183126	SOX2.p2	NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr5_+_78568094_78568227	0.182664	SOX2.p2	
hg18_v1_chr3_-_101077605_101077757	0.182464	SOX2.p2	EU531865|FILIP1L|11259|filamin A interacting protein 1-like	EU531866|FILIP1L|11259|filamin A interacting protein 1-like	BC027860|FILIP1L|11259|filamin A interacting protein 1-like	AK225855|FILIP1L|11259|filamin A interacting protein 1-like	AK096195|FILIP1L|11259|filamin A interacting protein 1-like	NM_014890|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr6_+_123142344_123142452	0.182412	SOX2.p2	NM_001446|FABP7|2173|fatty acid binding protein 7, brain	BC012299|FABP7|2173|fatty acid binding protein 7, brain
hg18_v1_chr6_+_41148665_41148690	0.182052	SOX2.p2	NM_002505|NFYA|4800|nuclear transcription factor Y, alpha	NM_021705|NFYA|4800|nuclear transcription factor Y, alpha
hg18_v1_chr6_+_28200365_28200391	0.181834	SOX2.p2	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16	AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16	NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16	BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16
hg18_v1_chr2_+_10180304_10180376	0.18163	SOX2.p2	CR596700|RRM2|6241|ribonucleotide reductase M2	NM_001034|RRM2|6241|ribonucleotide reductase M2	AK092671|RRM2|6241|ribonucleotide reductase M2	AK123010|RRM2|6241|ribonucleotide reductase M2	AK313719|RRM2|6241|ribonucleotide reductase M2	BC030154|RRM2|6241|ribonucleotide reductase M2	CR604378|RRM2|6241|ribonucleotide reductase M2	CR625489|RRM2|6241|ribonucleotide reductase M2	CR602150|RRM2|6241|ribonucleotide reductase M2	CR609838|RRM2|6241|ribonucleotide reductase M2	CR621427|RRM2|6241|ribonucleotide reductase M2	BC001886|RRM2|6241|ribonucleotide reductase M2	CR614990|RRM2|6241|ribonucleotide reductase M2	CR590959|RRM2|6241|ribonucleotide reductase M2	CR618451|RRM2|6241|ribonucleotide reductase M2	CR603461|RRM2|6241|ribonucleotide reductase M2	CR602054|RRM2|6241|ribonucleotide reductase M2	CR608076|RRM2|6241|ribonucleotide reductase M2	DQ891863|RRM2|6241|ribonucleotide reductase M2	DQ895052|RRM2|6241|ribonucleotide reductase M2
hg18_v1_chr9_-_14769530_14769530	0.181578	SOX2.p2	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1	NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1
hg18_v1_chr12_-_102413875_102413878	0.181361	SOX2.p2	AK058052|C12orf42|374470|chromosome 12 open reading frame 42	BC039352|C12orf42|374470|chromosome 12 open reading frame 42	BC117392|C12orf42|374470|chromosome 12 open reading frame 42	BC117394|C12orf42|374470|chromosome 12 open reading frame 42	NM_198521|C12orf42|374470|chromosome 12 open reading frame 42	BC044617|C12orf42|374470|chromosome 12 open reading frame 42	NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42
hg18_v1_chr11_+_4965996_4966015	0.181311	SOX2.p2	BC101541|MMP26|56547|matrix metallopeptidase 26	BC101543|MMP26|56547|matrix metallopeptidase 26	AF291664|MMP26|56547|matrix metallopeptidase 26	NM_021801|MMP26|56547|matrix metallopeptidase 26	AJ251531|MMP26|56547|matrix metallopeptidase 26	AF230354|MMP26|56547|matrix metallopeptidase 26	AF248646|MMP26|56547|matrix metallopeptidase 26
hg18_v1_chr4_+_88790477_88790482	0.181228	SOX2.p2	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1	NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1	U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1	U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1
hg18_v1_chr2_-_165768798_165768849	0.181138	SOX2.p2	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit	NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit
hg18_v1_chr2_+_143603439_143603483	0.180742	SOX2.p2	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15	BC016701|ARHGAP15|55843|Rho GTPase activating protein 15	BC038976|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr19_+_39402167_39402274	0.180327	SOX2.p2	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)
hg18_v1_chr20_+_31713750_31713802	0.1803	SOX2.p2	DQ080434|C20orf144|128864|chromosome 20 open reading frame 144	CR617586|C20orf144|128864|chromosome 20 open reading frame 144	NM_080825|C20orf144|128864|chromosome 20 open reading frame 144	BC032818|C20orf144|128864|chromosome 20 open reading frame 144
hg18_v1_chrX_+_84385649_84385658	0.180192	SOX2.p2	NM_021998|ZNF711|7552|zinc finger protein 711
hg18_v1_chr1_+_66230977_66231005	0.179977	SOX2.p2	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr18_+_53862744_53862821	0.179704	SOX2.p2	AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr12_+_16391795_16391978	0.179163	SOX2.p2	NM_020300|MGST1|4257|microsomal glutathione S-transferase 1	CR618561|MGST1|4257|microsomal glutathione S-transferase 1	CR609242|MGST1|4257|microsomal glutathione S-transferase 1	AK291148|MGST1|4257|microsomal glutathione S-transferase 1	AK309707|MGST1|4257|microsomal glutathione S-transferase 1	BC005923|MGST1|4257|microsomal glutathione S-transferase 1	BC056863|MGST1|4257|microsomal glutathione S-transferase 1	NM_145791|MGST1|4257|microsomal glutathione S-transferase 1
hg18_v1_chr10_-_90702490_90702559	0.179127	SOX2.p2	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta	X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR619420|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR597033|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR621459|ACTA2|59|actin, alpha 2, smooth muscle, aorta	BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta	AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr6_+_142510108_142510123	0.179016	SOX2.p2	BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)
hg18_v1_chr3_+_9451506_9451527	0.178687	SOX2.p2	
hg18_v1_chr20_+_9146036_9146081	0.178152	SOX2.p2	NM_182797|PLCB4|5332|phospholipase C, beta 4	BC117458|PLCB4|5332|phospholipase C, beta 4	BC143868|PLCB4|5332|phospholipase C, beta 4
hg18_v1_chr5_+_65258316_65258356	0.177346	SOX2.p2	BC126464|ERBB2IP|55914|erbb2 interacting protein	BC144075|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr21_-_15358996_15359180	0.177344	SOX2.p2	AK289786|NRIP1|8204|nuclear receptor interacting protein 1	NM_003489|NRIP1|8204|nuclear receptor interacting protein 1
hg18_v1_chr8_+_73612179_73612216	0.177036	SOX2.p2	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2	NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2
hg18_v1_chr2_+_196229715_196229926	0.176982	SOX2.p2	BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10
hg18_v1_chr9_+_676640_676693	0.176929	SOX2.p2	
hg18_v1_chr2_+_69995656_69995739	0.176869	SOX2.p2	BC098396|MXD1|4084|MAX dimerization protein 1	NM_002357|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr10_-_25281510_25281567	0.176609	SOX2.p2	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	CR615591|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1
hg18_v1_chr5_-_100266769_100266886	0.175659	SOX2.p2	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg18_v1_chr10_-_60792225_60792357	0.175274	SOX2.p2	DQ894404|FAM13C|220965|family with sequence similarity 13, member C	EU176262|FAM13C|220965|family with sequence similarity 13, member C	AK294805|FAM13C|220965|family with sequence similarity 13, member C	AK289796|FAM13C|220965|family with sequence similarity 13, member C	BC036453|FAM13C|220965|family with sequence similarity 13, member C	AK316542|FAM13C|220965|family with sequence similarity 13, member C	BC064431|FAM13C|220965|family with sequence similarity 13, member C	NM_001001971|FAM13C|220965|family with sequence similarity 13, member C	NM_001166698|FAM13C|220965|family with sequence similarity 13, member C	NM_198215|FAM13C|220965|family with sequence similarity 13, member C
hg18_v1_chr4_+_76868830_76868849	0.175216	SOX2.p2	AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr22_+_19601721_19601722	0.175207	SOX2.p2	BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr17_+_59205289_59205316	0.174361	SOX2.p2	NM_007372|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	NM_203499|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	BC093081|DDX42|11325|DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
hg18_v1_chr14_+_90650466_90650538	0.174342	SOX2.p2	AK123532|C14orf159|80017|chromosome 14 open reading frame 159	BC065558|C14orf159|80017|chromosome 14 open reading frame 159	BX248782|C14orf159|80017|chromosome 14 open reading frame 159	AK091394|C14orf159|80017|chromosome 14 open reading frame 159	AK022564|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr12_+_63849606_63849637	0.174214	SOX2.p2	AK312473|LEMD3|23592|LEM domain containing 3	NM_001167614|LEMD3|23592|LEM domain containing 3	NM_014319|LEMD3|23592|LEM domain containing 3	AK304317|LEMD3|23592|LEM domain containing 3	AF112299|LEMD3|23592|LEM domain containing 3
hg18_v1_chr2_+_203208456_203208508	0.174113	SOX2.p2	AB053315|FAM117B|150864|family with sequence similarity 117, member B
hg18_v1_chr2_-_110231431_110231431	0.173978	SOX2.p2	AK125647|MALL|7851|mal, T-cell differentiation protein-like	NM_005434|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr4_-_170314382_170314407	0.173936	SOX2.p2	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr10_+_93548261_93548427	0.173889	SOX2.p2	AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr2_+_69995740_69995769	0.173493	SOX2.p2	AK301088|MXD1|4084|MAX dimerization protein 1	AK312734|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr20_-_43609409_43609478	0.173464	SOX2.p2	AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	BC003675|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough	NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)
hg18_v1_chr9_+_114376709_114376794	0.173114	SOX2.p2	AK056181|KIAA1958|158405|KIAA1958
hg18_v1_chr6_+_80771108_80771128	0.172779	SOX2.p2	AK315696|TTK|7272|TTK protein kinase
hg18_v1_chr16_+_65701428_65701579	0.172543	SOX2.p2	
hg18_v1_chr17_+_25730086_25730098	0.172359	SOX2.p2	D85390|CPD|1362|carboxypeptidase D	BC045624|CPD|1362|carboxypeptidase D
hg18_v1_chr6_-_138231006_138231081	0.171905	SOX2.p2	
hg18_v1_chr6_+_80771040_80771102	0.171696	SOX2.p2	NM_001166691|TTK|7272|TTK protein kinase	NM_003318|TTK|7272|TTK protein kinase	BC032858|TTK|7272|TTK protein kinase	BC000633|TTK|7272|TTK protein kinase	AK292460|TTK|7272|TTK protein kinase
hg18_v1_chr9_+_114288899_114289068	0.171571	SOX2.p2	AK096613|KIAA1958|158405|KIAA1958	NM_133465|KIAA1958|158405|KIAA1958
hg18_v1_chr9_-_87904844_87904965	0.171359	SOX2.p2	AK075557|GOLM1|51280|golgi membrane protein 1	AK092943|GOLM1|51280|golgi membrane protein 1	NM_177937|GOLM1|51280|golgi membrane protein 1
hg18_v1_chr11_+_46697345_46697380	0.170393	SOX2.p2	BC051332|F2|2147|coagulation factor II (thrombin)	AK222775|F2|2147|coagulation factor II (thrombin)	AK222777|F2|2147|coagulation factor II (thrombin)	AK293326|F2|2147|coagulation factor II (thrombin)	EU832664|F2|2147|coagulation factor II (thrombin)	EU832742|F2|2147|coagulation factor II (thrombin)	CR617821|F2|2147|coagulation factor II (thrombin)	CR594467|F2|2147|coagulation factor II (thrombin)	V00595|F2|2147|coagulation factor II (thrombin)
hg18_v1_chr1_-_120240635_120240660	0.170293	SOX2.p2	NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30	BC028372|ADAM30|11085|ADAM metallopeptidase domain 30	AY358734|ADAM30|11085|ADAM metallopeptidase domain 30	AK292483|ADAM30|11085|ADAM metallopeptidase domain 30
hg18_v1_chr1_+_246635918_246635918	0.170274	SOX2.p2	NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1
hg18_v1_chr9_-_106420305_106420305	0.170211	SOX2.p2	NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9
hg18_v1_chr9_-_113561613_113561633	0.170122	SOX2.p2	BC041858|C9orf84|158401|chromosome 9 open reading frame 84	AK126055|C9orf84|158401|chromosome 9 open reading frame 84	NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84
hg18_v1_chr13_-_38510246_38510261	0.169953	SOX2.p2	NM_025138|C13orf23|80209|chromosome 13 open reading frame 23	NM_170719|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr6_-_32742265_32742571	0.169925	SOX2.p2	L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1	M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1
hg18_v1_chr4_+_106849354_106849490	0.169907	SOX2.p2	AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg18_v1_chr17_+_54997667_54997871	0.169858	SOX2.p2	AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg18_v1_chr4_+_156899575_156899733	0.169432	SOX2.p2	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3
hg18_v1_chr18_+_53862888_53862921	0.169431	SOX2.p2	DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr2_+_110013297_110013297	0.169394	SOX2.p2	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 read-through	NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr3_-_99236520_99236520	0.169163	SOX2.p2	NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3
hg18_v1_chr14_-_22825148_22825182	0.169155	SOX2.p2	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr8_-_17624304_17624363	0.169032	SOX2.p2	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1	NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1
hg18_v1_chr8_-_86441115_86441194	0.16856	SOX2.p2	DQ890930|CA1|759|carbonic anhydrase I	DQ894091|CA1|759|carbonic anhydrase I	X05014|CA1|759|carbonic anhydrase I	NM_001164830|CA1|759|carbonic anhydrase I
hg18_v1_chr6_-_49789204_49789257	0.168354	SOX2.p2	AK223337|CRISP2|7180|cysteine-rich secretory protein 2	M25532|CRISP2|7180|cysteine-rich secretory protein 2	BC022011|CRISP2|7180|cysteine-rich secretory protein 2	BC107707|CRISP2|7180|cysteine-rich secretory protein 2	X95239|CRISP2|7180|cysteine-rich secretory protein 2	AY289796|CRISP2|7180|cysteine-rich secretory protein 2	AY292863|CRISP2|7180|cysteine-rich secretory protein 2	AY773479|CRISP2|7180|cysteine-rich secretory protein 2	AK292385|CRISP2|7180|cysteine-rich secretory protein 2	AY292862|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2	NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2	NM_003296|CRISP2|7180|cysteine-rich secretory protein 2
hg18_v1_chr17_-_24491521_24491554	0.168264	SOX2.p2	AB177860|MYO18A|399687|myosin XVIIIA	AY703984|MYO18A|399687|myosin XVIIIA	AK303522|MYO18A|399687|myosin XVIIIA	AK302725|MYO18A|399687|myosin XVIIIA
hg18_v1_chr9_-_103237851_103237925	0.167868	SOX2.p2	CR617866|ALDOB|229|aldolase B, fructose-bisphosphate	CR604271|ALDOB|229|aldolase B, fructose-bisphosphate	CR600199|ALDOB|229|aldolase B, fructose-bisphosphate	CR613920|ALDOB|229|aldolase B, fructose-bisphosphate	CR626275|ALDOB|229|aldolase B, fructose-bisphosphate	CR601412|ALDOB|229|aldolase B, fructose-bisphosphate	CR605801|ALDOB|229|aldolase B, fructose-bisphosphate	CR606411|ALDOB|229|aldolase B, fructose-bisphosphate	X01098|ALDOB|229|aldolase B, fructose-bisphosphate	AK026411|ALDOB|229|aldolase B, fructose-bisphosphate	AK290795|ALDOB|229|aldolase B, fructose-bisphosphate	BC029399|ALDOB|229|aldolase B, fructose-bisphosphate	NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate	X02747|ALDOB|229|aldolase B, fructose-bisphosphate
hg18_v1_chr18_-_5187240_5187265	0.167793	SOX2.p2	NM_001145194|LOC642597|642597|hypothetical protein LOC642597
hg18_v1_chr12_+_15366712_15366925	0.167693	SOX2.p2	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O
hg18_v1_chr1_-_150353179_150353179	0.167459	SOX2.p2	NM_007113|TCHH|7062|trichohyalin
hg18_v1_chr5_-_33927724_33927880	0.167356	SOX2.p2	BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12
hg18_v1_chr14_+_71065794_71065794	0.167209	SOX2.p2	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1
hg18_v1_chr5_+_57823017_57823086	0.167149	SOX2.p2	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane	NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane
hg18_v1_chr2_+_191009265_191009365	0.166478	SOX2.p2	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6
hg18_v1_chr22_+_19601723_19601939	0.166374	SOX2.p2	BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr20_-_47963682_47963682	0.16623	SOX2.p2	AK289644|SPATA2|9825|spermatogenesis associated 2	NM_001135773|SPATA2|9825|spermatogenesis associated 2
hg18_v1_chrX_-_151370325_151370486	0.165803	SOX2.p2	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3	NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg18_v1_chr14_-_46882144_46882187	0.165585	SOX2.p2	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2
hg18_v1_chr12_+_68265469_68265519	0.165547	SOX2.p2	NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR616195|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR599514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR606401|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR615034|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR618455|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	CR621324|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)
hg18_v1_chrX_+_70420237_70420257	0.165454	SOX2.p2	CR605046|NONO|4841|non-POU domain containing, octamer-binding	CR614502|NONO|4841|non-POU domain containing, octamer-binding	BC028299|NONO|4841|non-POU domain containing, octamer-binding	BC012141|NONO|4841|non-POU domain containing, octamer-binding	BC025352|NONO|4841|non-POU domain containing, octamer-binding	BC025280|NONO|4841|non-POU domain containing, octamer-binding	BC002364|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr5_-_156935283_156935306	0.165394	SOX2.p2	
hg18_v1_chr11_+_46697335_46697338	0.164999	SOX2.p2	M33031|F2|2147|coagulation factor II (thrombin)
hg18_v1_chr6_-_76259976_76260217	0.164738	SOX2.p2	AK290232|FILIP1|27145|filamin A interacting protein 1	BC136443|FILIP1|27145|filamin A interacting protein 1	BC136444|FILIP1|27145|filamin A interacting protein 1	AL832009|FILIP1|27145|filamin A interacting protein 1	AK097021|FILIP1|27145|filamin A interacting protein 1	BX647178|FILIP1|27145|filamin A interacting protein 1	NM_015687|FILIP1|27145|filamin A interacting protein 1
hg18_v1_chr7_-_21951946_21952068	0.164544	SOX2.p2	AY161168|CDCA7L|55536|cell division cycle associated 7-like	AY161169|CDCA7L|55536|cell division cycle associated 7-like	BC009352|CDCA7L|55536|cell division cycle associated 7-like	AK095965|CDCA7L|55536|cell division cycle associated 7-like	BC025242|CDCA7L|55536|cell division cycle associated 7-like	BC032576|CDCA7L|55536|cell division cycle associated 7-like	AK300781|CDCA7L|55536|cell division cycle associated 7-like	BC039823|CDCA7L|55536|cell division cycle associated 7-like	AK022955|CDCA7L|55536|cell division cycle associated 7-like	AK292490|CDCA7L|55536|cell division cycle associated 7-like	NM_001127370|CDCA7L|55536|cell division cycle associated 7-like	NM_001127371|CDCA7L|55536|cell division cycle associated 7-like	NM_018719|CDCA7L|55536|cell division cycle associated 7-like
hg18_v1_chr2_+_14690290_14690315	0.164173	SOX2.p2	AK092654|FAM84A|151354|family with sequence similarity 84, member A	AK314463|FAM84A|151354|family with sequence similarity 84, member A	AJ417080|FAM84A|151354|family with sequence similarity 84, member A	BC029933|FAM84A|151354|family with sequence similarity 84, member A	BC052284|FAM84A|151354|family with sequence similarity 84, member A	AF370404|FAM84A|151354|family with sequence similarity 84, member A
hg18_v1_chr16_+_68238460_68238571	0.16365	SOX2.p2	AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive
hg18_v1_chr14_-_57688669_57688685	0.163437	SOX2.p2	AK292513|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr5_+_139856688_139856810	0.163175	SOX2.p2	AF217646|ANKHD1|54882|ankyrin repeat and KH domain containing 1
hg18_v1_chr17_+_52688842_52689102	0.16314	SOX2.p2	BC001526|MSI2|124540|musashi homolog 2 (Drosophila)	NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)	DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)	DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)
hg18_v1_chr2_+_231629852_231629868	0.162975	SOX2.p2	BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr8_+_79591074_79591204	0.162749	SOX2.p2	CR607441|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR623358|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR610811|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR602843|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	CR614267|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr1_+_162795538_162795683	0.162376	SOX2.p2	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1	M86546|PBX1|5087|pre-B-cell leukemia homeobox 1	AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1	BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1	BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1	BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1
hg18_v1_chr16_+_68890597_68890701	0.162341	SOX2.p2	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR594442|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604580|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR604732|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr17_-_70039107_70039169	0.162072	SOX2.p2	AF427618|CD300LB|124599|CD300 molecule-like family member b	AY359025|CD300LB|124599|CD300 molecule-like family member b	AY646929|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr1_+_165225121_165225212	0.162024	SOX2.p2	CR597287|MAEL|84944|maelstrom homolog (Drosophila)	AK302253|MAEL|84944|maelstrom homolog (Drosophila)	AK131066|MAEL|84944|maelstrom homolog (Drosophila)	DQ076156|MAEL|84944|maelstrom homolog (Drosophila)	AK027810|MAEL|84944|maelstrom homolog (Drosophila)	NM_032858|MAEL|84944|maelstrom homolog (Drosophila)	CR614428|MAEL|84944|maelstrom homolog (Drosophila)	CR624981|MAEL|84944|maelstrom homolog (Drosophila)	BC028595|MAEL|84944|maelstrom homolog (Drosophila)
hg18_v1_chr3_+_157877146_157877146	0.16189	SOX2.p2	BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase
hg18_v1_chr16_+_24459173_24459557	0.161499	SOX2.p2	AF063596|RBBP6|5930|retinoblastoma binding protein 6	BC101139|RBBP6|5930|retinoblastoma binding protein 6	BC101140|RBBP6|5930|retinoblastoma binding protein 6	BC101141|RBBP6|5930|retinoblastoma binding protein 6	BC101142|RBBP6|5930|retinoblastoma binding protein 6	BC114353|RBBP6|5930|retinoblastoma binding protein 6	BC114354|RBBP6|5930|retinoblastoma binding protein 6	BC118667|RBBP6|5930|retinoblastoma binding protein 6	BC139830|RBBP6|5930|retinoblastoma binding protein 6	BC029352|RBBP6|5930|retinoblastoma binding protein 6	BC063524|RBBP6|5930|retinoblastoma binding protein 6	AB112074|RBBP6|5930|retinoblastoma binding protein 6	AB112075|RBBP6|5930|retinoblastoma binding protein 6	BX648661|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr3_-_143230124_143230196	0.1612	SOX2.p2	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)
hg18_v1_chr17_-_71023048_71023212	0.161198	SOX2.p2	AF451976|CASKIN2|57513|CASK interacting protein 2	BC032359|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr14_+_36200867_36200885	0.161047	SOX2.p2	AK313627|PAX9|5083|paired box 9	AB248958|PAX9|5083|paired box 9
hg18_v1_chr13_+_38510440_38510631	0.161022	SOX2.p2	AL833329|NHLRC3|387921|NHL repeat containing 3	NM_001012754|NHLRC3|387921|NHL repeat containing 3	NM_001017370|NHLRC3|387921|NHL repeat containing 3	BX648122|NHLRC3|387921|NHL repeat containing 3	BC052492|NHLRC3|387921|NHL repeat containing 3	BC140877|NHLRC3|387921|NHL repeat containing 3	BC140878|NHLRC3|387921|NHL repeat containing 3	CR749318|NHLRC3|387921|NHL repeat containing 3	AK300260|NHLRC3|387921|NHL repeat containing 3	AK299198|NHLRC3|387921|NHL repeat containing 3	CR613108|NHLRC3|387921|NHL repeat containing 3	BX647872|NHLRC3|387921|NHL repeat containing 3	CR601315|NHLRC3|387921|NHL repeat containing 3
hg18_v1_chr10_-_123346148_123346148	0.161	SOX2.p2	AK294026|FGFR2|2263|fibroblast growth factor receptor 2	NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2
hg18_v1_chr2_+_231629869_231629980	0.160894	SOX2.p2	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr15_-_32398220_32398320	0.160757	SOX2.p2	BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6
hg18_v1_chr4_-_95482994_95483049	0.160594	SOX2.p2	CR622166|HPGDS|27306|hematopoietic prostaglandin D synthase	CR619711|HPGDS|27306|hematopoietic prostaglandin D synthase	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase	AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase	NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase
hg18_v1_chr14_-_59167193_59167272	0.160516	SOX2.p2	CR612754|RTN1|6252|reticulon 1	CR607343|RTN1|6252|reticulon 1	CR626841|RTN1|6252|reticulon 1	CR603795|RTN1|6252|reticulon 1	CR606583|RTN1|6252|reticulon 1	CR596361|RTN1|6252|reticulon 1	CR600625|RTN1|6252|reticulon 1	CR601949|RTN1|6252|reticulon 1	CR622105|RTN1|6252|reticulon 1	CR623614|RTN1|6252|reticulon 1	NM_206852|RTN1|6252|reticulon 1
hg18_v1_chr4_+_78172966_78173092	0.160355	SOX2.p2	AK124592|SEPT11|55752|septin 11
hg18_v1_chrX_+_128501862_128502097	0.160318	SOX2.p2	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe	NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe	U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe	AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe	BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe
hg18_v1_chr2_+_102744921_102744973	0.160314	SOX2.p2	CR936735|TMEM182|130827|transmembrane protein 182	NM_144632|TMEM182|130827|transmembrane protein 182	CR936731|TMEM182|130827|transmembrane protein 182	CR936732|TMEM182|130827|transmembrane protein 182	AK129862|TMEM182|130827|transmembrane protein 182	BC130306|TMEM182|130827|transmembrane protein 182	BC130308|TMEM182|130827|transmembrane protein 182
hg18_v1_chr5_+_85949518_85949628	0.160311	SOX2.p2	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc	NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc	BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc	X16560|COX7C|1350|cytochrome c oxidase subunit VIIc	BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ891355|COX7C|1350|cytochrome c oxidase subunit VIIc	DQ894536|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr7_+_91408086_91408348	0.159858	SOX2.p2	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9	AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9
hg18_v1_chr7_+_116182676_116182699	0.15939	SOX2.p2	
hg18_v1_chr12_+_129212955_129212984	0.159362	SOX2.p2	BC070037|FZD10|11211|frizzled homolog 10 (Drosophila)	CR606242|FZD10|11211|frizzled homolog 10 (Drosophila)	NM_007197|FZD10|11211|frizzled homolog 10 (Drosophila)
hg18_v1_chr8_-_107023_107023	0.159125	SOX2.p2	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21
hg18_v1_chr1_-_156923111_156923129	0.159081	SOX2.p2	M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)	NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg18_v1_chr22_+_19601619_19601720	0.158958	SOX2.p2	AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr14_+_74299748_74299822	0.158645	SOX2.p2	AK095760|YLPM1|56252|YLP motif containing 1	NM_019589|YLPM1|56252|YLP motif containing 1
hg18_v1_chr21_-_33935883_33936029	0.158606	SOX2.p2	BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1	NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1
hg18_v1_chr3_+_151171755_151171799	0.158444	SOX2.p2	BC012363|LOC646903|646903|hypothetical LOC646903	CR593252|LOC646903|646903|hypothetical LOC646903
hg18_v1_chr6_+_129245978_129246034	0.157714	SOX2.p2	NM_000426|LAMA2|3908|laminin, alpha 2	NM_001079823|LAMA2|3908|laminin, alpha 2	Z26653|LAMA2|3908|laminin, alpha 2
hg18_v1_chr3_-_116272911_116272950	0.157605	SOX2.p2	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr14_-_57688560_57688659	0.157373	SOX2.p2	BC146861|C14orf37|145407|chromosome 14 open reading frame 37	BX161411|C14orf37|145407|chromosome 14 open reading frame 37	NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37	AK292605|C14orf37|145407|chromosome 14 open reading frame 37	BX161448|C14orf37|145407|chromosome 14 open reading frame 37
hg18_v1_chr5_+_36912595_36912648	0.157198	SOX2.p2	NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)	NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)	AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)
hg18_v1_chr10_+_129237602_129237602	0.156871	SOX2.p2	NM_001030013|NPS|594857|neuropeptide S
hg18_v1_chr17_-_36570508_36570511	0.156132	SOX2.p2	AJ406936|KRTAP4-4|84616|keratin associated protein 4-4	NM_032524|KRTAP4-4|84616|keratin associated protein 4-4	AJ296168|KRTAP4-4|84616|keratin associated protein 4-4
hg18_v1_chr1_+_109221271_109221349	0.156074	SOX2.p2	AK295563|GPSM2|29899|G-protein signaling modulator 2	BC027732|GPSM2|29899|G-protein signaling modulator 2
hg18_v1_chr2_-_234441739_234441761	0.156019	SOX2.p2	AK316372|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr13_+_48582389_48582525	0.155632	SOX2.p2	AK302415|FNDC3A|22862|fibronectin type III domain containing 3A	AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A	NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A	AB023187|FNDC3A|22862|fibronectin type III domain containing 3A	BC107793|FNDC3A|22862|fibronectin type III domain containing 3A
hg18_v1_chr17_-_10265991_10265991	0.155528	SOX2.p2	AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal
hg18_v1_chr17_+_63252087_63252242	0.155181	SOX2.p2	AK297281|BPTF|2186|bromodomain PHD finger transcription factor	BC037422|BPTF|2186|bromodomain PHD finger transcription factor	NM_004459|BPTF|2186|bromodomain PHD finger transcription factor	NM_182641|BPTF|2186|bromodomain PHD finger transcription factor	AB032251|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr7_+_94130673_94130691	0.154944	SOX2.p2	AB049834|PEG10|23089|paternally expressed 10
hg18_v1_chr12_+_62524778_62524849	0.154808	SOX2.p2	BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1	BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1
hg18_v1_chr4_-_152366970_152367109	0.154702	SOX2.p2	BC032404|SH3D19|152503|SH3 domain containing 19	BX647422|SH3D19|152503|SH3 domain containing 19	NM_001009555|SH3D19|152503|SH3 domain containing 19	NM_001128923|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr12_+_68028397_68028400	0.154319	SOX2.p2	AK130149|LYZ|4069|lysozyme	NM_000239|LYZ|4069|lysozyme
hg18_v1_chr13_-_38510183_38510220	0.154252	SOX2.p2	AK074360|C13orf23|80209|chromosome 13 open reading frame 23	AB107354|C13orf23|80209|chromosome 13 open reading frame 23
hg18_v1_chr10_+_104995633_104995694	0.154198	SOX2.p2	BC157875|LOC729020|729020|rcRPE	BC171885|LOC729020|729020|rcRPE	NM_001143909|LOC729020|729020|rcRPE	BC137242|LOC729020|729020|rcRPE	BC137243|LOC729020|729020|rcRPE	BC157829|LOC729020|729020|rcRPE	BC171806|LOC729020|729020|rcRPE
hg18_v1_chr6_+_53043729_53043729	0.154185	SOX2.p2	AF176704|FBXO9|26268|F-box protein 9	NM_012347|FBXO9|26268|F-box protein 9
hg18_v1_chr2_-_74460933_74460989	0.154163	SOX2.p2	AK314352|DCTN1|1639|dynactin 1	NM_001135040|DCTN1|1639|dynactin 1	NM_001190837|DCTN1|1639|dynactin 1	NM_004082|DCTN1|1639|dynactin 1
hg18_v1_chr17_-_36577949_36577949	0.153986	SOX2.p2	NM_033187|KRTAP4-3|85290|keratin associated protein 4-3
hg18_v1_chr2_+_207512522_207512568	0.15383	SOX2.p2	BC112076|CPO|130749|carboxypeptidase O	BC112078|CPO|130749|carboxypeptidase O	NM_173077|CPO|130749|carboxypeptidase O	AJ422118|CPO|130749|carboxypeptidase O
hg18_v1_chr10_-_99383165_99383333	0.153761	SOX2.p2	AK289406|MORN4|118812|MORN repeat containing 4	DQ338435|MORN4|118812|MORN repeat containing 4	DQ338436|MORN4|118812|MORN repeat containing 4	AL834132|MORN4|118812|MORN repeat containing 4	BC022054|MORN4|118812|MORN repeat containing 4	BC093023|MORN4|118812|MORN repeat containing 4	AK098791|MORN4|118812|MORN repeat containing 4	AJ312050|MORN4|118812|MORN repeat containing 4	NM_178832|MORN4|118812|MORN repeat containing 4
hg18_v1_chr9_+_132700462_132700515	0.153524	SOX2.p2	M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr20_-_2589476_2589596	0.152772	SOX2.p2	AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr5_-_146415782_146415892	0.152678	SOX2.p2	BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr13_-_28190961_28191149	0.152635	SOX2.p2	BX537565|SLC46A3|283537|solute carrier family 46, member 3	BC060850|SLC46A3|283537|solute carrier family 46, member 3	BC068556|SLC46A3|283537|solute carrier family 46, member 3	CR611527|SLC46A3|283537|solute carrier family 46, member 3	AK093932|SLC46A3|283537|solute carrier family 46, member 3	BC036662|SLC46A3|283537|solute carrier family 46, member 3	NM_001135919|SLC46A3|283537|solute carrier family 46, member 3	NM_181785|SLC46A3|283537|solute carrier family 46, member 3
hg18_v1_chr2_+_228064531_228064539	0.152545	SOX2.p2	AK295030|AGFG1|3267|ArfGAP with FG repeats 1
hg18_v1_chr11_+_58146721_58146801	0.151922	SOX2.p2	BC069167|CNTF|1270|ciliary neurotrophic factor	NM_000614|CNTF|1270|ciliary neurotrophic factor	BC068030|CNTF|1270|ciliary neurotrophic factor	AK314118|CNTF|1270|ciliary neurotrophic factor	BC074963|CNTF|1270|ciliary neurotrophic factor	BC074964|CNTF|1270|ciliary neurotrophic factor	S72921|CNTF|1270|ciliary neurotrophic factor
hg18_v1_chr10_+_63331401_63331474	0.151903	SOX2.p2	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)
hg18_v1_chr12_+_119418294_119418298	0.151867	SOX2.p2	AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr11_-_113776262_113776507	0.151782	SOX2.p2	CR457222|C11orf71|54494|chromosome 11 open reading frame 71	BC071695|C11orf71|54494|chromosome 11 open reading frame 71	NM_019021|C11orf71|54494|chromosome 11 open reading frame 71	BC009041|C11orf71|54494|chromosome 11 open reading frame 71	AK000017|C11orf71|54494|chromosome 11 open reading frame 71	CR597454|C11orf71|54494|chromosome 11 open reading frame 71
hg18_v1_chr7_+_94130752_94130882	0.151229	SOX2.p2	AB028974|PEG10|23089|paternally expressed 10	AF216076|PEG10|23089|paternally expressed 10
hg18_v1_chr11_+_46697312_46697330	0.151013	SOX2.p2	NM_000506|F2|2147|coagulation factor II (thrombin)	AK303747|F2|2147|coagulation factor II (thrombin)	AK312965|F2|2147|coagulation factor II (thrombin)	AJ972449|F2|2147|coagulation factor II (thrombin)
hg18_v1_chr9_+_124836666_124836666	0.150954	SOX2.p2	BC066885|GPR21|2844|G protein-coupled receptor 21	BC066886|GPR21|2844|G protein-coupled receptor 21	BC067532|GPR21|2844|G protein-coupled receptor 21	BC067533|GPR21|2844|G protein-coupled receptor 21	BC067534|GPR21|2844|G protein-coupled receptor 21	NM_005294|GPR21|2844|G protein-coupled receptor 21
hg18_v1_chr2_-_192419896_192420071	0.150952	SOX2.p2	DQ891440|SDPR|8436|serum deprivation response	DQ894617|SDPR|8436|serum deprivation response	BC016475|SDPR|8436|serum deprivation response	AF085481|SDPR|8436|serum deprivation response	AK026943|SDPR|8436|serum deprivation response
hg18_v1_chr13_-_73606362_73606432	0.150732	SOX2.p2	AK291397|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr6_-_41148061_41148332	0.150505	SOX2.p2	CR620893|C6orf130|221443|chromosome 6 open reading frame 130	BC011709|C6orf130|221443|chromosome 6 open reading frame 130	NM_145063|C6orf130|221443|chromosome 6 open reading frame 130	AK290939|C6orf130|221443|chromosome 6 open reading frame 130	AK310688|C6orf130|221443|chromosome 6 open reading frame 130	AK313361|C6orf130|221443|chromosome 6 open reading frame 130	BC021579|C6orf130|221443|chromosome 6 open reading frame 130	AJ420538|C6orf130|221443|chromosome 6 open reading frame 130
hg18_v1_chr8_+_26491507_26491687	0.150188	SOX2.p2	U17279|DPYSL2|1808|dihydropyrimidinase-like 2
hg18_v1_chr3_+_120347686_120347687	0.150021	SOX2.p2	AK057421|C3orf30|152405|chromosome 3 open reading frame 30	NM_152539|C3orf30|152405|chromosome 3 open reading frame 30	BC130475|C3orf30|152405|chromosome 3 open reading frame 30	BC144197|C3orf30|152405|chromosome 3 open reading frame 30
hg18_v1_chr7_-_83108682_83108682	0.149954	SOX2.p2	AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
hg18_v1_chr11_-_51269023_51269023	0.149884	SOX2.p2	BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5	NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5
hg18_v1_chr3_-_15814678_15814694	0.149784	SOX2.p2	AK293770|ANKRD28|23243|ankyrin repeat domain 28	NM_001195098|ANKRD28|23243|ankyrin repeat domain 28
hg18_v1_chr12_-_10953427_10953427	0.149637	SOX2.p2	BC095518|TAS2R13|50838|taste receptor, type 2, member 13	NM_023920|TAS2R13|50838|taste receptor, type 2, member 13
hg18_v1_chr4_+_74493174_74493197	0.149615	SOX2.p2	CR610438|ALB|213|albumin	CR618825|ALB|213|albumin
hg18_v1_chr4_+_57469122_57469266	0.149081	SOX2.p2	BC132859|REST|5978|RE1-silencing transcription factor	BC136491|REST|5978|RE1-silencing transcription factor
hg18_v1_chr2_+_74914742_74914795	0.148481	SOX2.p2	AF148513|HK2|3099|hexokinase 2	BC021116|HK2|3099|hexokinase 2	BC064369|HK2|3099|hexokinase 2	AK290357|HK2|3099|hexokinase 2
hg18_v1_chr16_-_70763849_70763849	0.148444	SOX2.p2	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1
hg18_v1_chr14_+_61653827_61653949	0.148266	SOX2.p2	CR626003|FLJ43390|646113|hypothetical LOC646113	BX248751|FLJ43390|646113|hypothetical LOC646113
hg18_v1_chr4_-_74307637_74307650	0.148234	SOX2.p2	BX648035|ANKRD17|26057|ankyrin repeat domain 17	AK300302|ANKRD17|26057|ankyrin repeat domain 17
hg18_v1_chr15_-_54175954_54176025	0.147939	SOX2.p2	AL832584|RFX7|64864|regulatory factor X, 7
hg18_v1_chr15_+_46285789_46285790	0.147803	SOX2.p2	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1	AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1
hg18_v1_chr1_+_70459592_70459666	0.147732	SOX2.p2	BC017359|SRSF11|9295|serine/arginine-rich splicing factor 11
hg18_v1_chr4_+_114433551_114433586	0.14751	SOX2.p2	AK294720|ANK2|287|ankyrin 2, neuronal
hg18_v1_chr14_-_26136799_26136858	0.147456	SOX2.p2	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1	NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1
hg18_v1_chr1_+_213245507_213245507	0.147246	SOX2.p2	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2
hg18_v1_chr11_+_94440045_94440068	0.147209	SOX2.p2	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr11_-_64403712_64403762	0.147169	SOX2.p2	AK302930|EHD1|10938|EH-domain containing 1	AK097842|EHD1|10938|EH-domain containing 1
hg18_v1_chr21_-_31995972_31996007	0.146965	SOX2.p2	AB032998|SCAF4|57466|SR-related CTD-associated factor 4	AK025748|SCAF4|57466|SR-related CTD-associated factor 4	AL117417|SCAF4|57466|SR-related CTD-associated factor 4
hg18_v1_chr17_-_36074812_36074941	0.146789	SOX2.p2	BX538083|KRT222|125113|keratin 222	EU832123|KRT222|125113|keratin 222	EU832217|KRT222|125113|keratin 222	BC032815|KRT222|125113|keratin 222	AK308598|KRT222|125113|keratin 222	NM_152349|KRT222|125113|keratin 222
hg18_v1_chr3_+_189354167_189354491	0.14673	SOX2.p2	NM_001167672|LPP|4026|LIM domain containing preferred translocation partner in lipoma	AK304035|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr8_-_12657339_12657412	0.14637	SOX2.p2	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1
hg18_v1_chr1_-_178100204_178100211	0.146143	SOX2.p2	
hg18_v1_chr5_+_126140949_126141098	0.14608	SOX2.p2	DQ891592|LMNB1|4001|lamin B1	EU176582|LMNB1|4001|lamin B1
hg18_v1_chr1_-_211087570_211087613	0.145952	SOX2.p2	AY640234|C1orf227|149643|chromosome 1 open reading frame 227	BC035742|C1orf227|149643|chromosome 1 open reading frame 227	NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227
hg18_v1_chr11_+_16716723_16716749	0.145531	SOX2.p2	NM_014267|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr5_+_137231458_137231472	0.145455	SOX2.p2	AF133820|MYOT|9499|myotilin	AK300076|MYOT|9499|myotilin	AK307620|MYOT|9499|myotilin	AK312733|MYOT|9499|myotilin	BC005376|MYOT|9499|myotilin	AF144477|MYOT|9499|myotilin
hg18_v1_chr5_+_137231443_137231447	0.145234	SOX2.p2	NM_001135940|MYOT|9499|myotilin	NM_006790|MYOT|9499|myotilin	AK300088|MYOT|9499|myotilin
hg18_v1_chr2_-_136311219_136311219	0.144887	SOX2.p2	NM_002299|LCT|3938|lactase	X07994|LCT|3938|lactase
hg18_v1_chr8_-_93184629_93184633	0.144758	SOX2.p2	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chrX_+_106336517_106336517	0.144645	SOX2.p2	BC033510|CXorf41|139212|chromosome X open reading frame 41	NM_001169154|CXorf41|139212|chromosome X open reading frame 41	NM_173494|CXorf41|139212|chromosome X open reading frame 41
hg18_v1_chr2_+_101874765_101874783	0.144379	SOX2.p2	BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr10_-_11693535_11693750	0.144297	SOX2.p2	AK292944|USP6NL|9712|USP6 N-terminal like	BC042943|USP6NL|9712|USP6 N-terminal like	D13644|USP6NL|9712|USP6 N-terminal like	BC010351|USP6NL|9712|USP6 N-terminal like	NM_014688|USP6NL|9712|USP6 N-terminal like
hg18_v1_chr15_-_56093477_56093526	0.144184	SOX2.p2	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2
hg18_v1_chr8_+_76482661_76482825	0.14414	SOX2.p2	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma	Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr2_+_211050653_211050677	0.143997	SOX2.p2	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr11_-_92570626_92570645	0.14394	SOX2.p2	
hg18_v1_chr14_-_34413831_34413888	0.143703	SOX2.p2	BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr19_+_19837625_19837743	0.143551	SOX2.p2	BC053607|ZNF253|56242|zinc finger protein 253	BC014148|ZNF253|56242|zinc finger protein 253	NM_021047|ZNF253|56242|zinc finger protein 253	BC065572|ZNF253|56242|zinc finger protein 253	AK074757|ZNF253|56242|zinc finger protein 253	BC125063|ZNF253|56242|zinc finger protein 253	BC125064|ZNF253|56242|zinc finger protein 253
hg18_v1_chr4_+_53938488_53938565	0.143509	SOX2.p2	AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr7_-_19778928_19778928	0.143199	SOX2.p2	BX648384|TMEM196|256130|transmembrane protein 196	NM_152774|TMEM196|256130|transmembrane protein 196
hg18_v1_chr2_+_169021001_169021010	0.143135	SOX2.p2	AK172775|LASS6|253782|LAG1 homolog, ceramide synthase 6
hg18_v1_chr4_-_149577404_149577461	0.143104	SOX2.p2	
hg18_v1_chr1_+_67404756_67404756	0.1431	SOX2.p2	AF461422|IL23R|149233|interleukin 23 receptor	NM_144701|IL23R|149233|interleukin 23 receptor
hg18_v1_chr2_+_69995807_69995966	0.14306	SOX2.p2	L06895|MXD1|4084|MAX dimerization protein 1	BC113531|MXD1|4084|MAX dimerization protein 1	BC117260|MXD1|4084|MAX dimerization protein 1	BC143831|MXD1|4084|MAX dimerization protein 1	BC143832|MXD1|4084|MAX dimerization protein 1	BC144601|MXD1|4084|MAX dimerization protein 1	BC069377|MXD1|4084|MAX dimerization protein 1	BC069433|MXD1|4084|MAX dimerization protein 1	CR536495|MXD1|4084|MAX dimerization protein 1	CR541692|MXD1|4084|MAX dimerization protein 1
hg18_v1_chr12_-_38300109_38300109	0.142985	SOX2.p2	AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2
hg18_v1_chr12_+_119418215_119418286	0.142936	SOX2.p2	NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1	NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr10_-_116241572_116241622	0.142721	SOX2.p2	
hg18_v1_chr20_-_43732291_43732322	0.142701	SOX2.p2	AY047609|WFDC11|259239|WAP four-disulfide core domain 11	NM_147197|WFDC11|259239|WAP four-disulfide core domain 11	BC062670|WFDC11|259239|WAP four-disulfide core domain 11
hg18_v1_chr16_+_74868676_74868806	0.142319	SOX2.p2	AB051550|CNTNAP4|85445|contactin associated protein-like 4	NM_033401|CNTNAP4|85445|contactin associated protein-like 4
hg18_v1_chr14_+_36200815_36200856	0.142281	SOX2.p2	BC001159|PAX9|5083|paired box 9
hg18_v1_chr15_+_65145248_65145663	0.142234	SOX2.p2	NM_005902|SMAD3|4088|SMAD family member 3	BC050743|SMAD3|4088|SMAD family member 3	U68019|SMAD3|4088|SMAD family member 3	U76622|SMAD3|4088|SMAD family member 3	EU446487|SMAD3|4088|SMAD family member 3	AB209616|SMAD3|4088|SMAD family member 3
hg18_v1_chr11_+_125208420_125208420	0.141902	SOX2.p2	AK123042|PATE4|399968|prostate and testis expressed 4	AK311509|PATE4|399968|prostate and testis expressed 4	NM_001144874|PATE4|399968|prostate and testis expressed 4
hg18_v1_chr1_-_116185215_116185271	0.141525	SOX2.p2	BC096359|NHLH2|4808|nescient helix loop helix 2	BC096360|NHLH2|4808|nescient helix loop helix 2	M96740|NHLH2|4808|nescient helix loop helix 2	NM_005599|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr4_+_113437947_113438006	0.141417	SOX2.p2	NM_001102406|ALPK1|80216|alpha-kinase 1	NM_025144|ALPK1|80216|alpha-kinase 1	AK026323|ALPK1|80216|alpha-kinase 1	AK304708|ALPK1|80216|alpha-kinase 1	AK097246|ALPK1|80216|alpha-kinase 1	BC028117|ALPK1|80216|alpha-kinase 1	AK303489|ALPK1|80216|alpha-kinase 1	BX648798|ALPK1|80216|alpha-kinase 1	BC060780|ALPK1|80216|alpha-kinase 1
hg18_v1_chr5_+_95092384_95092865	0.141349	SOX2.p2	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3	NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3	CR596551|RHOBTB3|22836|Rho-related BTB domain containing 3	BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3	BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3	BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3	AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3	AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3
hg18_v1_chr9_-_14388981_14388981	0.141167	SOX2.p2	AK131233|NFIB|4781|nuclear factor I/B	NM_001190738|NFIB|4781|nuclear factor I/B
hg18_v1_chr2_-_160765008_160765075	0.141008	SOX2.p2	AK304203|ITGB6|3694|integrin, beta 6	AL831998|ITGB6|3694|integrin, beta 6	AK290300|ITGB6|3694|integrin, beta 6	AK313944|ITGB6|3694|integrin, beta 6
hg18_v1_chr6_+_27885692_27885830	0.14095	SOX2.p2	BC007518|HIST1H3H|8357|histone cluster 1, H3h	AK311991|HIST1H3H|8357|histone cluster 1, H3h	NM_003536|HIST1H3H|8357|histone cluster 1, H3h	EU446975|HIST1H3H|8357|histone cluster 1, H3h	BC096128|HIST1H3H|8357|histone cluster 1, H3h	BC096129|HIST1H3H|8357|histone cluster 1, H3h	BC096130|HIST1H3H|8357|histone cluster 1, H3h	BC143046|HIST1H3H|8357|histone cluster 1, H3h	BC148243|HIST1H3H|8357|histone cluster 1, H3h	BC148250|HIST1H3H|8357|histone cluster 1, H3h
hg18_v1_chr20_-_45360903_45361050	0.140693	SOX2.p2	BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8
hg18_v1_chr13_+_28900776_28900845	0.140639	SOX2.p2	BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2	NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2	AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2	BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2
hg18_v1_chr5_+_15553288_15553310	0.140575	SOX2.p2	AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7	NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr2_-_208697441_208697557	0.140109	SOX2.p2	U66583|CRYGD|1421|crystallin, gamma D	BC117338|CRYGD|1421|crystallin, gamma D	BC117340|CRYGD|1421|crystallin, gamma D	NM_006891|CRYGD|1421|crystallin, gamma D
hg18_v1_chr1_+_87567164_87567375	0.139953	SOX2.p2	BC017673|LMO4|8543|LIM domain only 4	BC003600|LMO4|8543|LIM domain only 4
hg18_v1_chr7_+_23112441_23112441	0.139948	SOX2.p2	NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)
hg18_v1_chr8_-_110762409_110762409	0.139739	SOX2.p2	AK290469|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)	NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr17_+_69939130_69939269	0.139707	SOX2.p2	BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C
hg18_v1_chr1_+_161305188_161305387	0.139682	SOX2.p2	DQ346664|RGS4|5999|regulator of G-protein signaling 4	AK295540|RGS4|5999|regulator of G-protein signaling 4	NM_005613|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr2_+_231629806_231629836	0.139552	SOX2.p2	NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr14_+_19318240_19318321	0.139484	SOX2.p2	BC136987|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1	NM_001005500|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1
hg18_v1_chr17_-_71023221_71023248	0.139394	SOX2.p2	BC066643|CASKIN2|57513|CASK interacting protein 2	NM_020753|CASKIN2|57513|CASK interacting protein 2
hg18_v1_chr4_+_15292500_15292601	0.139291	SOX2.p2	BC035074|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr2_+_160180092_160180108	0.13894	SOX2.p2	CR604974|LOC643072|643072|hypothetical LOC643072
hg18_v1_chr8_+_40130143_40130362	0.13894	SOX2.p2	BC021672|C8orf4|56892|chromosome 8 open reading frame 4	NM_020130|C8orf4|56892|chromosome 8 open reading frame 4	BC020623|C8orf4|56892|chromosome 8 open reading frame 4	AF268037|C8orf4|56892|chromosome 8 open reading frame 4	AK026240|C8orf4|56892|chromosome 8 open reading frame 4	CR594872|C8orf4|56892|chromosome 8 open reading frame 4	CR620271|C8orf4|56892|chromosome 8 open reading frame 4	CR622918|C8orf4|56892|chromosome 8 open reading frame 4	CR600720|C8orf4|56892|chromosome 8 open reading frame 4	CR616793|C8orf4|56892|chromosome 8 open reading frame 4	EU832636|C8orf4|56892|chromosome 8 open reading frame 4	EU832712|C8orf4|56892|chromosome 8 open reading frame 4	CR602517|C8orf4|56892|chromosome 8 open reading frame 4	CR618129|C8orf4|56892|chromosome 8 open reading frame 4	CR607025|C8orf4|56892|chromosome 8 open reading frame 4
hg18_v1_chr7_+_56086871_56086929	0.138845	SOX2.p2	NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr10_+_4995597_4995645	0.138833	SOX2.p2	CR611068|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)	S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr14_+_62740878_62741014	0.13865	SOX2.p2	AF087862|RHOJ|57381|ras homolog gene family, member J	AK027351|RHOJ|57381|ras homolog gene family, member J	NM_020663|RHOJ|57381|ras homolog gene family, member J	AK027278|RHOJ|57381|ras homolog gene family, member J	BC062575|RHOJ|57381|ras homolog gene family, member J	AB209218|RHOJ|57381|ras homolog gene family, member J	AF309563|RHOJ|57381|ras homolog gene family, member J
hg18_v1_chr2_+_143603368_143603433	0.138412	SOX2.p2	NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15	AK308219|ARHGAP15|55843|Rho GTPase activating protein 15	AF212222|ARHGAP15|55843|Rho GTPase activating protein 15	AF217507|ARHGAP15|55843|Rho GTPase activating protein 15	AF217522|ARHGAP15|55843|Rho GTPase activating protein 15	AY219338|ARHGAP15|55843|Rho GTPase activating protein 15	AK226014|ARHGAP15|55843|Rho GTPase activating protein 15
hg18_v1_chr17_-_41626032_41626140	0.138364	SOX2.p2	BC098376|KIAA1267|284058|KIAA1267	NM_015443|KIAA1267|284058|KIAA1267
hg18_v1_chr5_-_114543632_114544141	0.137945	SOX2.p2	AB196558|TRIM36|55521|tripartite motif containing 36	AJ272269|TRIM36|55521|tripartite motif containing 36	BC130334|TRIM36|55521|tripartite motif containing 36	AK125426|TRIM36|55521|tripartite motif containing 36	BC045164|TRIM36|55521|tripartite motif containing 36	BC046096|TRIM36|55521|tripartite motif containing 36	NM_001017397|TRIM36|55521|tripartite motif containing 36	NM_001017398|TRIM36|55521|tripartite motif containing 36	NM_018700|TRIM36|55521|tripartite motif containing 36
hg18_v1_chr6_-_132875858_132876029	0.137922	SOX2.p2	U77942|STX7|8417|syntaxin 7	CR596095|STX7|8417|syntaxin 7	BC011975|STX7|8417|syntaxin 7	AK294911|STX7|8417|syntaxin 7	CR615646|STX7|8417|syntaxin 7	AK301464|STX7|8417|syntaxin 7	CR607128|STX7|8417|syntaxin 7	CR618907|STX7|8417|syntaxin 7	NM_003569|STX7|8417|syntaxin 7
hg18_v1_chr14_+_65205750_65205885	0.137773	SOX2.p2	AF052088|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC093889|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	BC101816|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514324|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AJ514325|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	NM_178157|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr1_+_168767864_168767990	0.137038	SOX2.p2	AK308339|GORAB|92344|golgin, RAB6-interacting	NM_001146039|GORAB|92344|golgin, RAB6-interacting	NM_152281|GORAB|92344|golgin, RAB6-interacting	AK021814|GORAB|92344|golgin, RAB6-interacting	BC064945|GORAB|92344|golgin, RAB6-interacting	BC047476|GORAB|92344|golgin, RAB6-interacting	AK057661|GORAB|92344|golgin, RAB6-interacting
hg18_v1_chr13_-_83354474_83354528	0.136987	SOX2.p2	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1	NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chrX_+_70420221_70420233	0.136977	SOX2.p2	L14599|NONO|4841|non-POU domain containing, octamer-binding	AK291140|NONO|4841|non-POU domain containing, octamer-binding	BC003129|NONO|4841|non-POU domain containing, octamer-binding	CR597886|NONO|4841|non-POU domain containing, octamer-binding	CR619917|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr4_+_119174947_119175100	0.136964	SOX2.p2	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg18_v1_chr4_+_76868850_76869027	0.136912	SOX2.p2	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)	NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)	BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)	AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)	DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)	EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)
hg18_v1_chr1_+_181075059_181075101	0.136908	SOX2.p2	NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr8_-_101384633_101384662	0.13674	SOX2.p2	AB271913|RNF19A|25897|ring finger protein 19A	AB029316|RNF19A|25897|ring finger protein 19A	NM_015435|RNF19A|25897|ring finger protein 19A
hg18_v1_chr20_-_43577677_43577677	0.136587	SOX2.p2	AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3	NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3
hg18_v1_chr15_+_54998115_54998124	0.136547	SOX2.p2	NM_003205|TCF12|6938|transcription factor 12	NM_207036|TCF12|6938|transcription factor 12	NM_207037|TCF12|6938|transcription factor 12	NM_207038|TCF12|6938|transcription factor 12
hg18_v1_chr5_+_67622242_67622383	0.136506	SOX2.p2	AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg18_v1_chr7_+_56086933_56086955	0.136489	SOX2.p2	L27706|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106941|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	BC106942|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr4_+_176076083_176076133	0.136262	SOX2.p2	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29	NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29	NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29	AK292410|ADAM29|11086|ADAM metallopeptidase domain 29	BC036070|ADAM29|11086|ADAM metallopeptidase domain 29
hg18_v1_chr5_+_139008091_139008137	0.136232	SOX2.p2	BC006428|CXXC5|51523|CXXC finger protein 5	CR611313|CXXC5|51523|CXXC finger protein 5	CR614582|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr6_-_80001043_80001111	0.135996	SOX2.p2	L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3	AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR599808|HMGN3|9324|high mobility group nucleosomal binding domain 3	BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr8_-_133140808_133140808	0.135783	SOX2.p2	AK297911|OC90|729330|otoconin 90	NM_001080399|OC90|729330|otoconin 90
hg18_v1_chr14_-_23107106_23107118	0.135685	SOX2.p2	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chr2_+_185171537_185171564	0.135682	SOX2.p2	BC142612|ZNF804A|91752|zinc finger protein 804A
hg18_v1_chr16_+_65620610_65620648	0.135535	SOX2.p2	CR618498|CBFB|865|core-binding factor, beta subunit
hg18_v1_chr11_+_55842358_55842358	0.135479	SOX2.p2	NM_001005202|OR8K3|219473|olfactory receptor, family 8, subfamily K, member 3
hg18_v1_chr5_-_156935317_156935449	0.134929	SOX2.p2	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19	AF326918|ADAM19|8728|ADAM metallopeptidase domain 19	Y13786|ADAM19|8728|ADAM metallopeptidase domain 19	AK091464|ADAM19|8728|ADAM metallopeptidase domain 19	AK308182|ADAM19|8728|ADAM metallopeptidase domain 19	NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19
hg18_v1_chr11_+_88550687_88550770	0.134587	SOX2.p2	NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)	BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)	M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)	Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)	U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)	J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)
hg18_v1_chr11_+_113776582_113776642	0.13457	SOX2.p2	AF156098|RBM7|10179|RNA binding motif protein 7	CR592590|RBM7|10179|RNA binding motif protein 7	BC034381|RBM7|10179|RNA binding motif protein 7	NM_016090|RBM7|10179|RNA binding motif protein 7	AK225615|RBM7|10179|RNA binding motif protein 7	BC013320|RBM7|10179|RNA binding motif protein 7	BC070262|RBM7|10179|RNA binding motif protein 7	CR593114|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr16_+_65701284_65701426	0.13438	SOX2.p2	AF176088|C16orf70|80262|chromosome 16 open reading frame 70	BC004556|C16orf70|80262|chromosome 16 open reading frame 70	NM_025187|C16orf70|80262|chromosome 16 open reading frame 70
hg18_v1_chr20_-_34005619_34005680	0.134272	SOX2.p2	AM392883|SCAND1|51282|SCAN domain containing 1	AM393129|SCAND1|51282|SCAN domain containing 1	CR457188|SCAND1|51282|SCAN domain containing 1	EU446495|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr18_+_7936885_7936928	0.13423	SOX2.p2	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M
hg18_v1_chr2_-_164300758_164300768	0.134191	SOX2.p2	BX649105|FIGN|55137|fidgetin	NM_018086|FIGN|55137|fidgetin	AK125324|FIGN|55137|fidgetin
hg18_v1_chr6_+_154373323_154373328	0.133855	SOX2.p2	DQ680044|OPRM1|4988|opioid receptor, mu 1	EU340241|OPRM1|4988|opioid receptor, mu 1	EU340242|OPRM1|4988|opioid receptor, mu 1	EU340243|OPRM1|4988|opioid receptor, mu 1	NM_001145279|OPRM1|4988|opioid receptor, mu 1	NM_001145280|OPRM1|4988|opioid receptor, mu 1	NM_001145281|OPRM1|4988|opioid receptor, mu 1
hg18_v1_chrX_-_139694248_139694388	0.133362	SOX2.p2	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa
hg18_v1_chr17_-_41625921_41625942	0.133144	SOX2.p2	BX538006|KIAA1267|284058|KIAA1267	NM_001193466|KIAA1267|284058|KIAA1267
hg18_v1_chr12_+_54231249_54231277	0.132876	SOX2.p2	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4	NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4
hg18_v1_chr20_+_30061905_30061913	0.132873	SOX2.p2	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160	AK057090|C20orf160|140706|chromosome 20 open reading frame 160	BC030254|C20orf160|140706|chromosome 20 open reading frame 160
hg18_v1_chr17_-_70039187_70039207	0.132668	SOX2.p2	DQ893585|CD300LB|124599|CD300 molecule-like family member b	DQ896833|CD300LB|124599|CD300 molecule-like family member b	BC028091|CD300LB|124599|CD300 molecule-like family member b	AK290925|CD300LB|124599|CD300 molecule-like family member b	AK298665|CD300LB|124599|CD300 molecule-like family member b	NM_174892|CD300LB|124599|CD300 molecule-like family member b
hg18_v1_chr18_-_24010944_24011126	0.131923	SOX2.p2	EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)
hg18_v1_chr2_-_197883739_197883789	0.131885	SOX2.p2	BC016985|ANKRD44|91526|ankyrin repeat domain 44	AK301209|ANKRD44|91526|ankyrin repeat domain 44	NM_001195144|ANKRD44|91526|ankyrin repeat domain 44	NM_153697|ANKRD44|91526|ankyrin repeat domain 44
hg18_v1_chr14_+_19458580_19458605	0.131665	SOX2.p2	BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5	NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5
hg18_v1_chr10_-_62002672_62002721	0.131592	SOX2.p2	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)
hg18_v1_chr20_+_56904042_56904077	0.131563	SOX2.p2	M77026|GNAS|2778|GNAS complex locus	CR604694|GNAS|2778|GNAS complex locus
hg18_v1_chr2_-_152663748_152663838	0.131561	SOX2.p2	AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr3_-_71715431_71715905	0.131391	SOX2.p2	AK122710|FOXP1|27086|forkhead box P1	BC005055|FOXP1|27086|forkhead box P1	BC054815|FOXP1|27086|forkhead box P1	BC071893|FOXP1|27086|forkhead box P1	BC080521|FOXP1|27086|forkhead box P1	BC068481|FOXP1|27086|forkhead box P1	NM_001012505|FOXP1|27086|forkhead box P1	NM_032682|FOXP1|27086|forkhead box P1
hg18_v1_chr11_+_94439964_94440020	0.131359	SOX2.p2	BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr12_+_54080480_54080579	0.131336	SOX2.p2	BC136897|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	BC136899|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65	NM_001005518|OR6C65|403282|olfactory receptor, family 6, subfamily C, member 65
hg18_v1_chr7_-_84589182_84589182	0.131296	SOX2.p2	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
hg18_v1_chr20_+_54533191_54533230	0.131279	SOX2.p2	CR624258|C20orf106|200232|chromosome 20 open reading frame 106	NM_001012971|C20orf106|200232|chromosome 20 open reading frame 106	BC029411|C20orf106|200232|chromosome 20 open reading frame 106	BC105792|C20orf107|388799|chromosome 20 open reading frame 107	BC107704|C20orf106|200232|chromosome 20 open reading frame 106	BC070179|C20orf106|200232|chromosome 20 open reading frame 106
hg18_v1_chr2_+_84597087_84597089	0.130983	SOX2.p2	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6	NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6
hg18_v1_chr12_+_52132154_52132169	0.130954	SOX2.p2	BC071942|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr5_-_147266257_147266293	0.130953	SOX2.p2	AY358656|C5orf46|389336|chromosome 5 open reading frame 46	AK289403|C5orf46|389336|chromosome 5 open reading frame 46	BC021680|C5orf46|389336|chromosome 5 open reading frame 46	NM_206966|C5orf46|389336|chromosome 5 open reading frame 46
hg18_v1_chr7_-_86433139_86433226	0.13092	SOX2.p2	AK296250|KIAA1324L|222223|KIAA1324-like	NM_152748|KIAA1324L|222223|KIAA1324-like
hg18_v1_chr6_+_17708483_17708674	0.130858	SOX2.p2	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1	AK296393|FAM8A1|51439|family with sequence similarity 8, member A1	AK312814|FAM8A1|51439|family with sequence similarity 8, member A1	AF097027|FAM8A1|51439|family with sequence similarity 8, member A1	BC047881|FAM8A1|51439|family with sequence similarity 8, member A1
hg18_v1_chr2_-_151052391_151052429	0.130621	SOX2.p2	X97758|RND3|390|Rho family GTPase 3	BC012513|RND3|390|Rho family GTPase 3	CR626467|RND3|390|Rho family GTPase 3	CR607069|RND3|390|Rho family GTPase 3	AK298007|RND3|390|Rho family GTPase 3	NM_005168|RND3|390|Rho family GTPase 3	AK313224|RND3|390|Rho family GTPase 3
hg18_v1_chr6_-_47362102_47362179	0.130546	SOX2.p2	AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr12_-_73889777_73889777	0.130215	SOX2.p2	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg18_v1_chr7_-_106088565_106088914	0.129831	SOX2.p2	AK093350|FLJ36031|168455|hypothetical protein FLJ36031	BC013906|FLJ36031|168455|hypothetical protein FLJ36031	NM_175884|FLJ36031|168455|hypothetical protein FLJ36031
hg18_v1_chr19_+_56452775_56452775	0.129811	SOX2.p2	AK097554|C19orf75|284369|chromosome 19 open reading frame 75	NM_173635|C19orf75|284369|chromosome 19 open reading frame 75
hg18_v1_chr3_+_170974745_170974983	0.129676	SOX2.p2	AB079777|MYNN|55892|myoneurin	AB079778|MYNN|55892|myoneurin	NM_001185119|MYNN|55892|myoneurin	AB528460|MYNN|55892|myoneurin	DQ891596|MYNN|55892|myoneurin	DQ894790|MYNN|55892|myoneurin	AY515692|MYNN|55892|myoneurin	AY541761|MYNN|55892|myoneurin	AY515691|MYNN|55892|myoneurin
hg18_v1_chr6_+_14032655_14032655	0.12967	SOX2.p2	NM_001165034|RNF182|221687|ring finger protein 182
hg18_v1_chr7_+_156128431_156128481	0.129388	SOX2.p2	NM_001184997|RNF32|140545|ring finger protein 32	AF325690|RNF32|140545|ring finger protein 32
hg18_v1_chr7_+_37746520_37746520	0.129092	SOX2.p2	AY288420|GPR141|353345|G protein-coupled receptor 141	BC120951|GPR141|353345|G protein-coupled receptor 141	BC120952|GPR141|353345|G protein-coupled receptor 141	NM_181791|GPR141|353345|G protein-coupled receptor 141
hg18_v1_chr1_-_160648429_160648551	0.129002	SOX2.p2	AF256653|SH2D1B|117157|SH2 domain containing 1B	AF403479|SH2D1B|117157|SH2 domain containing 1B	DQ891975|SH2D1B|117157|SH2 domain containing 1B	DQ895166|SH2D1B|117157|SH2 domain containing 1B	AK097162|SH2D1B|117157|SH2 domain containing 1B	AK314743|SH2D1B|117157|SH2 domain containing 1B	AF484964|SH2D1B|117157|SH2 domain containing 1B	BC066595|SH2D1B|117157|SH2 domain containing 1B	BC022407|SH2D1B|117157|SH2 domain containing 1B	NM_053282|SH2D1B|117157|SH2 domain containing 1B
hg18_v1_chr15_+_55298908_55299010	0.128976	SOX2.p2	AK294991|TCF12|6938|transcription factor 12	AK304007|TCF12|6938|transcription factor 12	AK311359|TCF12|6938|transcription factor 12	AK308101|TCF12|6938|transcription factor 12	NM_207040|TCF12|6938|transcription factor 12	BX537967|TCF12|6938|transcription factor 12	AM393573|TCF12|6938|transcription factor 12
hg18_v1_chr9_-_114814286_114814292	0.128728	SOX2.p2	CR602666|ZNF883|169834|zinc finger protein 883	AK095843|ZNF883|169834|zinc finger protein 883	NM_001101338|ZNF883|169834|zinc finger protein 883
hg18_v1_chr4_-_87247829_87247829	0.128716	SOX2.p2	AK057723|MAPK10|5602|mitogen-activated protein kinase 10	NM_138981|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr11_+_100063061_100063616	0.128645	SOX2.p2	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42
hg18_v1_chr1_-_224993498_224993625	0.128642	SOX2.p2	BC015009|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B	NM_002221|ITPKB|3707|inositol 1,4,5-trisphosphate 3-kinase B
hg18_v1_chr2_+_14690260_14690285	0.128476	SOX2.p2	NM_145175|FAM84A|151354|family with sequence similarity 84, member A
hg18_v1_chr9_-_19368815_19368917	0.128313	SOX2.p2	BC035447|RPS6|6194|ribosomal protein S6
hg18_v1_chr6_-_80001116_80001173	0.128279	SOX2.p2	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3	CR604353|HMGN3|9324|high mobility group nucleosomal binding domain 3	AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3	NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3
hg18_v1_chr3_-_193928038_193928081	0.128262	SOX2.p2	AK312513|FGF12|2257|fibroblast growth factor 12	BC022524|FGF12|2257|fibroblast growth factor 12	NM_004113|FGF12|2257|fibroblast growth factor 12
hg18_v1_chr8_+_136539290_136539476	0.12826	SOX2.p2	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3	AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3
hg18_v1_chr12_-_69434650_69434805	0.128245	SOX2.p2	BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr11_+_100367929_100368020	0.128163	SOX2.p2	AK314174|TMEM133|83935|transmembrane protein 133	AF247167|TMEM133|83935|transmembrane protein 133	NM_032021|TMEM133|83935|transmembrane protein 133
hg18_v1_chr6_-_83960351_83960412	0.128092	SOX2.p2	AK301867|PGM3|5238|phosphoglucomutase 3
hg18_v1_chr2_+_61146542_61146622	0.127752	SOX2.p2	AL833595|KIAA1841|84542|KIAA1841	BX647395|KIAA1841|84542|KIAA1841
hg18_v1_chr18_+_27332024_27332258	0.127631	SOX2.p2	NM_001943|DSG2|1829|desmoglein 2	BC099655|DSG2|1829|desmoglein 2	BC099656|DSG2|1829|desmoglein 2	BC099657|DSG2|1829|desmoglein 2	Z26317|DSG2|1829|desmoglein 2	AK308408|DSG2|1829|desmoglein 2
hg18_v1_chr12_+_54132264_54132264	0.127465	SOX2.p2	NM_054105|OR6C2|341416|olfactory receptor, family 6, subfamily C, member 2
hg18_v1_chr1_-_70443748_70443849	0.127456	SOX2.p2	BC003407|LRRC40|55631|leucine rich repeat containing 40	BC008586|LRRC40|55631|leucine rich repeat containing 40
hg18_v1_chr2_+_231629839_231629851	0.12738	SOX2.p2	BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg18_v1_chr16_+_8714687_8714719	0.127294	SOX2.p2	AK054834|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chrX_+_70420194_70420219	0.126686	SOX2.p2	AK297144|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr17_-_39265965_39266340	0.126645	SOX2.p2	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
hg18_v1_chr5_+_78567604_78567690	0.126524	SOX2.p2	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor
hg18_v1_chr4_+_42590038_42590039	0.12641	SOX2.p2	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1
hg18_v1_chr7_-_111633620_111633776	0.126105	SOX2.p2	AK095906|DOCK4|9732|dedicator of cytokinesis 4	AK309605|DOCK4|9732|dedicator of cytokinesis 4	NM_014705|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr19_+_62836322_62836433	0.126087	SOX2.p2	NM_006385|ZNF211|10520|zinc finger protein 211	NM_198855|ZNF211|10520|zinc finger protein 211	AK294869|ZNF211|10520|zinc finger protein 211	BC018138|ZNF211|10520|zinc finger protein 211	AK296942|ZNF211|10520|zinc finger protein 211	AK297047|ZNF211|10520|zinc finger protein 211	AK304666|ZNF211|10520|zinc finger protein 211	BC110856|ZNF211|10520|zinc finger protein 211	CR596216|ZNF211|10520|zinc finger protein 211	BC034351|ZNF211|10520|zinc finger protein 211	AK026941|ZNF211|10520|zinc finger protein 211
hg18_v1_chr12_+_22669352_22669477	0.125922	SOX2.p2	BC006111|ETNK1|55500|ethanolamine kinase 1	AL137750|ETNK1|55500|ethanolamine kinase 1	AK074425|ETNK1|55500|ethanolamine kinase 1
hg18_v1_chr5_+_140194152_140194152	0.125901	SOX2.p2	AF152315|PCDHA7|56141|protocadherin alpha 7	AF152485|PCDHA7|56141|protocadherin alpha 7	NM_018910|PCDHA7|56141|protocadherin alpha 7	NM_031852|PCDHA7|56141|protocadherin alpha 7
hg18_v1_chr5_-_111120929_111121032	0.12584	SOX2.p2	CR618085|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr8_+_17824772_17824779	0.125815	SOX2.p2	AK307583|PCM1|5108|pericentriolar material 1
hg18_v1_chr22_-_31732648_31732805	0.125707	SOX2.p2	CU013189|SYN3|8224|synapsin III	CU013477|SYN3|8224|synapsin III	BC075065|SYN3|8224|synapsin III	BC075066|SYN3|8224|synapsin III	BC117460|SYN3|8224|synapsin III	BC143874|SYN3|8224|synapsin III	AF046873|SYN3|8224|synapsin III	CR456589|SYN3|8224|synapsin III	NM_003490|SYN3|8224|synapsin III	NM_133633|SYN3|8224|synapsin III
hg18_v1_chr1_-_57661373_57661459	0.124946	SOX2.p2	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)
hg18_v1_chr14_-_106170414_106170713	0.124835	SOX2.p2	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)
hg18_v1_chr4_+_140806536_140806632	0.124535	SOX2.p2	AK307231|MGST2|4258|microsomal glutathione S-transferase 2	U77604|MGST2|4258|microsomal glutathione S-transferase 2	CR407640|MGST2|4258|microsomal glutathione S-transferase 2	DQ893384|MGST2|4258|microsomal glutathione S-transferase 2	DQ896704|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr3_-_69254226_69254435	0.124475	SOX2.p2	AM393202|LMOD3|56203|leiomodin 3 (fetal)	BC121019|LMOD3|56203|leiomodin 3 (fetal)	BC017925|LMOD3|56203|leiomodin 3 (fetal)	AL832033|LMOD3|56203|leiomodin 3 (fetal)	AK300096|LMOD3|56203|leiomodin 3 (fetal)	AL832709|LMOD3|56203|leiomodin 3 (fetal)	BC039202|LMOD3|56203|leiomodin 3 (fetal)	NM_198271|LMOD3|56203|leiomodin 3 (fetal)
hg18_v1_chr2_+_101874809_101875119	0.124451	SOX2.p2	BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4
hg18_v1_chr4_+_87070449_87070449	0.124427	SOX2.p2	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24	NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr3_-_71625318_71625396	0.124303	SOX2.p2	AF146696|FOXP1|27086|forkhead box P1	BC054505|FOXP1|27086|forkhead box P1
hg18_v1_chr2_-_152663454_152663498	0.124283	SOX2.p2	AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit
hg18_v1_chr2_-_106869949_106870008	0.124005	SOX2.p2	AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg18_v1_chr9_+_132700567_132700651	0.123905	SOX2.p2	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase
hg18_v1_chr12_-_45506001_45506046	0.123796	SOX2.p2	AF305814|SLC38A4|55089|solute carrier family 38, member 4	AF193836|SLC38A4|55089|solute carrier family 38, member 4	AK001053|SLC38A4|55089|solute carrier family 38, member 4	AK291168|SLC38A4|55089|solute carrier family 38, member 4	NM_001143824|SLC38A4|55089|solute carrier family 38, member 4	NM_018018|SLC38A4|55089|solute carrier family 38, member 4
hg18_v1_chr2_+_79201118_79201139	0.123525	SOX2.p2	AK291981|REG1A|5967|regenerating islet-derived 1 alpha	M18963|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr13_-_83354425_83354428	0.123484	SOX2.p2	BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1
hg18_v1_chr12_+_52132151_52132153	0.123438	SOX2.p2	AB188306|PCBP2|5094|poly(rC) binding protein 2	NM_001098620|PCBP2|5094|poly(rC) binding protein 2	NM_001128911|PCBP2|5094|poly(rC) binding protein 2	NM_001128912|PCBP2|5094|poly(rC) binding protein 2	NM_001128913|PCBP2|5094|poly(rC) binding protein 2	NM_001128914|PCBP2|5094|poly(rC) binding protein 2	NM_005016|PCBP2|5094|poly(rC) binding protein 2	NM_031989|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr15_+_71953020_71953103	0.123386	SOX2.p2	BC033516|TBC1D21|161514|TBC1 domain family, member 21	NM_153356|TBC1D21|161514|TBC1 domain family, member 21	AB449907|TBC1D21|161514|TBC1 domain family, member 21
hg18_v1_chr16_-_79668304_79668372	0.122642	SOX2.p2	AK057264|C16orf46|123775|chromosome 16 open reading frame 46	AK295411|C16orf46|123775|chromosome 16 open reading frame 46	BC064143|C16orf46|123775|chromosome 16 open reading frame 46	NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46	NM_152337|C16orf46|123775|chromosome 16 open reading frame 46
hg18_v1_chr16_+_65620536_65620560	0.122499	SOX2.p2	BC018509|CBFB|865|core-binding factor, beta subunit	NM_001755|CBFB|865|core-binding factor, beta subunit	NM_022845|CBFB|865|core-binding factor, beta subunit
hg18_v1_chrX_+_152562013_152562125	0.122467	SOX2.p2	BC034936|DUSP9|1852|dual specificity phosphatase 9	BC042166|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr2_+_210152399_210152432	0.122253	SOX2.p2	BC110423|MAP2|4133|microtubule-associated protein 2
hg18_v1_chr21_+_39099717_39099777	0.12223	SOX2.p2	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)
hg18_v1_chr4_+_140806371_140806509	0.122221	SOX2.p2	NM_002413|MGST2|4258|microsomal glutathione S-transferase 2	AK130948|MGST2|4258|microsomal glutathione S-transferase 2	BC025416|MGST2|4258|microsomal glutathione S-transferase 2
hg18_v1_chr20_+_21231921_21232030	0.121875	SOX2.p2	BC142960|XRN2|22803|5'-3' exoribonuclease 2	NM_012255|XRN2|22803|5'-3' exoribonuclease 2	AK001573|XRN2|22803|5'-3' exoribonuclease 2	AF064257|XRN2|22803|5'-3' exoribonuclease 2	BC131775|XRN2|22803|5'-3' exoribonuclease 2	AY382900|XRN2|22803|5'-3' exoribonuclease 2	AK303312|XRN2|22803|5'-3' exoribonuclease 2	AK314602|XRN2|22803|5'-3' exoribonuclease 2	AL136841|XRN2|22803|5'-3' exoribonuclease 2	AF152169|XRN2|22803|5'-3' exoribonuclease 2	BC000315|XRN2|22803|5'-3' exoribonuclease 2
hg18_v1_chr4_+_39084936_39084952	0.121614	SOX2.p2	BC104871|KLB|152831|klotho beta	BC113653|KLB|152831|klotho beta	BC143575|KLB|152831|klotho beta
hg18_v1_chr2_-_225073357_225073435	0.121426	SOX2.p2	CR603582|CUL3|8452|cullin 3
hg18_v1_chr9_-_74735669_74735747	0.121325	SOX2.p2	CR601139|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1
hg18_v1_chr7_+_141265085_141265144	0.12126	SOX2.p2	BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4
hg18_v1_chr2_-_127817143_127817274	0.121122	SOX2.p2	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2	AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2
hg18_v1_chr1_-_151310707_151310707	0.121106	SOX2.p2	NM_001017418|SPRR2B|6701|small proline-rich protein 2B
hg18_v1_chr17_+_70092651_70092651	0.121105	SOX2.p2	AK056444|C17orf77|146723|chromosome 17 open reading frame 77	NM_152460|C17orf77|146723|chromosome 17 open reading frame 77
hg18_v1_chrX_+_70359780_70359871	0.120961	SOX2.p2	NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa	BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa	AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa	BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa
hg18_v1_chr8_-_120033240_120033563	0.120669	SOX2.p2	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b
hg18_v1_chr7_+_96583840_96583840	0.120601	SOX2.p2	BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)	NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)
hg18_v1_chr2_-_170389669_170389698	0.120587	SOX2.p2	CR609377|METTL5|29081|methyltransferase like 5
hg18_v1_chr6_-_30136734_30136950	0.120451	SOX2.p2	AF032109|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	CR611202|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AK126001|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	BX648746|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)	AF032110|ZNRD1-AS1|80862|ZNRD1 antisense RNA 1 (non-protein coding)
hg18_v1_chr17_+_51585834_51585837	0.120384	SOX2.p2	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1	AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1
hg18_v1_chr6_+_148705817_148705952	0.120365	SOX2.p2	AJ507735|SASH1|23328|SAM and SH3 domain containing 1	BC063279|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr11_+_123625632_123625632	0.120356	SOX2.p2	NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1
hg18_v1_chr21_-_27261276_27261344	0.120346	SOX2.p2	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg18_v1_chr16_-_30705707_30706089	0.120066	SOX2.p2	AB002324|ZNF629|23361|zinc finger protein 629	NM_001080417|ZNF629|23361|zinc finger protein 629
hg18_v1_chr6_+_84626113_84626129	0.120055	SOX2.p2	AK313146|CYB5R4|51167|cytochrome b5 reductase 4	BC025380|CYB5R4|51167|cytochrome b5 reductase 4	AL832113|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr13_+_33290254_33290315	0.119852	SOX2.p2	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa	AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa	L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa	DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa	BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr15_+_80434362_80434411	0.119849	SOX2.p2	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2
hg18_v1_chr3_+_89239494_89239587	0.119806	SOX2.p2	M83941|EPHA3|2042|EPH receptor A3	AF213460|EPHA3|2042|EPH receptor A3	BC026247|EPHA3|2042|EPH receptor A3	AK291411|EPHA3|2042|EPH receptor A3
hg18_v1_chrX_+_149902415_149902515	0.119678	SOX2.p2	BX537505|HMGB3|3149|high-mobility group box 3	NM_005342|HMGB3|3149|high-mobility group box 3	Y10043|HMGB3|3149|high-mobility group box 3	BC070482|HMGB3|3149|high-mobility group box 3
hg18_v1_chr2_+_159360074_159360089	0.119667	SOX2.p2	AY324399|DAPL1|92196|death associated protein-like 1	NM_001017920|DAPL1|92196|death associated protein-like 1	AF086541|DAPL1|92196|death associated protein-like 1	BC140719|DAPL1|92196|death associated protein-like 1	BC127682|DAPL1|92196|death associated protein-like 1	BC127683|DAPL1|92196|death associated protein-like 1
hg18_v1_chr13_+_36291306_36291493	0.119502	SOX2.p2	NM_000538|RFXAP|5994|regulatory factor X-associated protein	AK313912|RFXAP|5994|regulatory factor X-associated protein	BC026088|RFXAP|5994|regulatory factor X-associated protein	DQ891169|RFXAP|5994|regulatory factor X-associated protein	DQ893581|RFXAP|5994|regulatory factor X-associated protein	DQ894352|RFXAP|5994|regulatory factor X-associated protein
hg18_v1_chr4_+_52403922_52404165	0.119378	SOX2.p2	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)	AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
hg18_v1_chr6_-_79732391_79732552	0.119285	SOX2.p2	BC064611|PHIP|55023|pleckstrin homology domain interacting protein	AK000712|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr17_-_53849888_53849897	0.119268	SOX2.p2	CR749257|RNF43|54894|ring finger protein 43
hg18_v1_chr4_+_57468847_57468993	0.118776	SOX2.p2	BC038985|REST|5978|RE1-silencing transcription factor	U13879|REST|5978|RE1-silencing transcription factor
hg18_v1_chr4_+_39084867_39084891	0.118442	SOX2.p2	AB079373|KLB|152831|klotho beta	NM_175737|KLB|152831|klotho beta
hg18_v1_chr2_+_218992053_218992116	0.118278	SOX2.p2	NM_007127|VIL1|7429|villin 1	AK223398|VIL1|7429|villin 1	AK300965|VIL1|7429|villin 1	AK313709|VIL1|7429|villin 1
hg18_v1_chr5_-_118352122_118352152	0.118049	SOX2.p2	BC114508|DTWD2|285605|DTW domain containing 2	BC114955|DTWD2|285605|DTW domain containing 2	AK091296|DTWD2|285605|DTW domain containing 2	NM_173666|DTWD2|285605|DTW domain containing 2
hg18_v1_chr2_-_171631728_171631728	0.118042	SOX2.p2	AK301857|TLK1|9874|tousled-like kinase 1	NM_001136555|TLK1|9874|tousled-like kinase 1
hg18_v1_chr11_-_71458739_71458785	0.117947	SOX2.p2	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1
hg18_v1_chr14_+_90650220_90650311	0.117942	SOX2.p2	AK023200|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr2_-_165133239_165133262	0.117914	SOX2.p2	AK309590|GRB14|2888|growth factor receptor-bound protein 14	AK301961|GRB14|2888|growth factor receptor-bound protein 14	AK302129|GRB14|2888|growth factor receptor-bound protein 14
hg18_v1_chr1_-_51660328_51660380	0.117901	SOX2.p2	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15	AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15	BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15	NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15
hg18_v1_chr1_-_155834357_155834493	0.117796	SOX2.p2	AF329490|FCRL4|83417|Fc receptor-like 4	AF397452|FCRL4|83417|Fc receptor-like 4	BC143628|FCRL4|83417|Fc receptor-like 4	BC125173|FCRL4|83417|Fc receptor-like 4	BC125174|FCRL4|83417|Fc receptor-like 4	AF343659|FCRL4|83417|Fc receptor-like 4	AF343660|FCRL4|83417|Fc receptor-like 4	AF343661|FCRL4|83417|Fc receptor-like 4	NM_031282|FCRL4|83417|Fc receptor-like 4
hg18_v1_chr4_+_53938586_53938656	0.117729	SOX2.p2	BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr8_+_98725604_98725667	0.117726	SOX2.p2	BC014977|MTDH|92140|metadherin	AF501310|MTDH|92140|metadherin
hg18_v1_chr12_-_78831821_78831821	0.117654	SOX2.p2	AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A	NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory (inhibitor) subunit 12A
hg18_v1_chr18_-_35634247_35634285	0.117497	SOX2.p2	AK090603|LOC647946|647946|hypothetical LOC647946
hg18_v1_chr4_+_15292363_15292486	0.117342	SOX2.p2	NM_001145191|FAM200B|285550|family with sequence similarity 200, member B	BC048993|FAM200B|285550|family with sequence similarity 200, member B
hg18_v1_chr7_+_80145461_80145547	0.117218	SOX2.p2	CR604329|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr6_-_13922525_13922969	0.117208	SOX2.p2	BC008234|CCDC90A|63933|coiled-coil domain containing 90A	BC016850|CCDC90A|63933|coiled-coil domain containing 90A	NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A	AK024611|CCDC90A|63933|coiled-coil domain containing 90A
hg18_v1_chr22_+_19601940_19602066	0.117186	SOX2.p2	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like
hg18_v1_chr2_+_108637916_108637940	0.117134	SOX2.p2	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC054477|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC093812|LIMS3|96626|LIM and senescent cell antigen-like domains 3	BC112233|LIMS3|96626|LIM and senescent cell antigen-like domains 3
hg18_v1_chr1_+_144149794_144150272	0.117017	SOX2.p2	NM_006472|TXNIP|10628|thioredoxin interacting protein	AK301203|TXNIP|10628|thioredoxin interacting protein	BX537824|TXNIP|10628|thioredoxin interacting protein	AK226090|TXNIP|10628|thioredoxin interacting protein	S73591|TXNIP|10628|thioredoxin interacting protein	BC093702|TXNIP|10628|thioredoxin interacting protein	BC093704|TXNIP|10628|thioredoxin interacting protein	AY594328|TXNIP|10628|thioredoxin interacting protein	BC024305|TXNIP|10628|thioredoxin interacting protein	AK301148|TXNIP|10628|thioredoxin interacting protein
hg18_v1_chr8_-_102872354_102872364	0.116846	SOX2.p2	AB209015|NCALD|83988|neurocalcin delta	AL136612|NCALD|83988|neurocalcin delta
hg18_v1_chr18_+_54039779_54039788	0.116775	SOX2.p2	AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr17_-_3248453_3248453	0.116545	SOX2.p2	NM_003553|OR1E1|8387|olfactory receptor, family 1, subfamily E, member 1
hg18_v1_chr14_+_19681734_19681734	0.116354	SOX2.p2	NM_001004724|OR4N5|390437|olfactory receptor, family 4, subfamily N, member 5
hg18_v1_chr9_-_36365965_36366036	0.11595	SOX2.p2	AK024996|RNF38|152006|ring finger protein 38	DQ895235|RNF38|152006|ring finger protein 38	EU176239|RNF38|152006|ring finger protein 38
hg18_v1_chr18_-_72336133_72336154	0.115858	SOX2.p2	D86975|ZNF516|9658|zinc finger protein 516	NM_014643|ZNF516|9658|zinc finger protein 516
hg18_v1_chr17_-_53849929_53849958	0.115486	SOX2.p2	NM_017763|RNF43|54894|ring finger protein 43	CR627423|RNF43|54894|ring finger protein 43
hg18_v1_chr15_+_69220841_69220887	0.115433	SOX2.p2	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4	BC140868|THSD4|79875|thrombospondin, type I, domain containing 4
hg18_v1_chr10_+_4995685_4995695	0.115395	SOX2.p2	D26124|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr15_+_21361901_21362021	0.115324	SOX2.p2	BC044639|MKRN3|7681|makorin ring finger protein 3	BC070293|MKRN3|7681|makorin ring finger protein 3	EU446987|MKRN3|7681|makorin ring finger protein 3
hg18_v1_chr10_+_71232281_71232313	0.115028	SOX2.p2	M59217|COL13A1|1305|collagen, type XIII, alpha 1
hg18_v1_chr2_-_162717159_162717159	0.114983	SOX2.p2	NM_002054|GCG|2641|glucagon
hg18_v1_chr17_+_56032385_56032557	0.114871	SOX2.p2	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr9_-_4289574_4289593	0.11481	SOX2.p2	DQ438882|GLIS3|169792|GLIS family zinc finger 3	DQ438887|GLIS3|169792|GLIS family zinc finger 3	DQ438892|GLIS3|169792|GLIS family zinc finger 3	DQ438899|GLIS3|169792|GLIS family zinc finger 3	DQ438902|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr12_-_60872814_60872817	0.11446	SOX2.p2	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg18_v1_chr2_-_55131096_55131118	0.114053	SOX2.p2	AK129806|RTN4|57142|reticulon 4	AF132047|RTN4|57142|reticulon 4
hg18_v1_chr16_+_8714927_8714971	0.114018	SOX2.p2	AK293983|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr1_-_111771877_111771921	0.113613	SOX2.p2	U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa	BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa	AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa	NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa
hg18_v1_chr2_+_11600287_11600301	0.113496	SOX2.p2	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr14_-_70345485_70345640	0.113493	SOX2.p2	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9	NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9
hg18_v1_chr15_+_91248706_91248823	0.113423	SOX2.p2	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2
hg18_v1_chr3_-_189354510_189354619	0.113379	SOX2.p2	BC042414|LOC339929|339929|hypothetical LOC339929
hg18_v1_chr11_+_4571844_4571844	0.113088	SOX2.p2	NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1
hg18_v1_chr22_+_29696662_29696813	0.112946	SOX2.p2	
hg18_v1_chr7_-_32077504_32077569	0.112903	SOX2.p2	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg18_v1_chr7_+_113853790_113853942	0.112713	SOX2.p2	AF467253|FOXP2|93986|forkhead box P2	NM_001172767|FOXP2|93986|forkhead box P2	NM_148899|FOXP2|93986|forkhead box P2	AF467258|FOXP2|93986|forkhead box P2	AF467259|FOXP2|93986|forkhead box P2
hg18_v1_chr1_+_190811479_190811584	0.112689	SOX2.p2	NM_002922|RGS1|5996|regulator of G-protein signaling 1	AK303138|RGS1|5996|regulator of G-protein signaling 1	AK315607|RGS1|5996|regulator of G-protein signaling 1	AK093544|RGS1|5996|regulator of G-protein signaling 1	BC015510|RGS1|5996|regulator of G-protein signaling 1	X73427|RGS1|5996|regulator of G-protein signaling 1	AF493925|RGS1|5996|regulator of G-protein signaling 1	BT006668|RGS1|5996|regulator of G-protein signaling 1	DQ890651|RGS1|5996|regulator of G-protein signaling 1	DQ893831|RGS1|5996|regulator of G-protein signaling 1
hg18_v1_chr2_-_215998181_215998254	0.112631	SOX2.p2	AF312399|FN1|2335|fibronectin 1
hg18_v1_chr1_+_145841569_145841569	0.112621	SOX2.p2	NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa
hg18_v1_chr16_+_30314276_30314347	0.112577	SOX2.p2	
hg18_v1_chr17_-_2943039_2943039	0.112426	SOX2.p2	BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2
hg18_v1_chr8_+_98725505_98725602	0.112354	SOX2.p2	BC045642|MTDH|92140|metadherin	NM_178812|MTDH|92140|metadherin	BC001815|MTDH|92140|metadherin
hg18_v1_chr2_+_218972963_218973087	0.112325	SOX2.p2	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chr9_+_122890394_122890425	0.112281	SOX2.p2	NM_007018|CEP110|11064|centrosomal protein 110kDa	BC137284|CEP110|11064|centrosomal protein 110kDa	BC137286|CEP110|11064|centrosomal protein 110kDa	AF513978|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr7_+_111633878_111633938	0.112257	SOX2.p2	AF209198|ZNF277|11179|zinc finger protein 277	NM_021994|ZNF277|11179|zinc finger protein 277
hg18_v1_chr16_-_57309625_57309654	0.112252	SOX2.p2	CR612588|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)
hg18_v1_chr8_+_61592097_61592104	0.112003	SOX2.p2	AK312344|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr4_+_106693225_106693237	0.111946	SOX2.p2	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38	BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38
hg18_v1_chr12_-_68379331_68379462	0.111647	SOX2.p2	BC151138|BEST3|144453|bestrophin 3	CR612373|BEST3|144453|bestrophin 3	BC006440|BEST3|144453|bestrophin 3	CR614874|BEST3|144453|bestrophin 3	AF440758|BEST3|144453|bestrophin 3	AK096459|BEST3|144453|bestrophin 3	NM_032735|BEST3|144453|bestrophin 3
hg18_v1_chr2_-_198248828_198249012	0.111639	SOX2.p2	AK055136|RFTN2|130132|raftlin family member 2	NM_144629|RFTN2|130132|raftlin family member 2	BC111069|RFTN2|130132|raftlin family member 2
hg18_v1_chr17_-_53847937_53848133	0.111497	SOX2.p2	AK296769|RNF43|54894|ring finger protein 43	AK000322|RNF43|54894|ring finger protein 43	BC109028|RNF43|54894|ring finger protein 43
hg18_v1_chr10_+_60606514_60606619	0.11114	SOX2.p2	BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR611792|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr1_-_188713324_188713393	0.110838	SOX2.p2	AK123024|FAM5C|339479|family with sequence similarity 5, member C	AB111893|FAM5C|339479|family with sequence similarity 5, member C	NM_199051|FAM5C|339479|family with sequence similarity 5, member C
hg18_v1_chr3_-_140677990_140678047	0.110828	SOX2.p2	BC069296|RBP2|5948|retinol binding protein 2, cellular	BC069361|RBP2|5948|retinol binding protein 2, cellular	BC069396|RBP2|5948|retinol binding protein 2, cellular	BC069424|RBP2|5948|retinol binding protein 2, cellular	BC069447|RBP2|5948|retinol binding protein 2, cellular	BC069469|RBP2|5948|retinol binding protein 2, cellular	BC069513|RBP2|5948|retinol binding protein 2, cellular	BC069522|RBP2|5948|retinol binding protein 2, cellular	U13831|RBP2|5948|retinol binding protein 2, cellular	NM_004164|RBP2|5948|retinol binding protein 2, cellular	AK291978|RBP2|5948|retinol binding protein 2, cellular
hg18_v1_chr2_+_188865796_188865857	0.11079	SOX2.p2	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	CR619595|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr16_+_55523248_55523248	0.11073	SOX2.p2	NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg18_v1_chr8_+_42871319_42871431	0.110722	SOX2.p2	
hg18_v1_chr17_-_30783631_30783655	0.110715	SOX2.p2	AK001122|SLFN12|55106|schlafen family member 12	BC035605|SLFN12|55106|schlafen family member 12	NM_018042|SLFN12|55106|schlafen family member 12
hg18_v1_chr8_+_11697588_11697598	0.110702	SOX2.p2	NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr11_+_6998275_6998275	0.110315	SOX2.p2	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14	NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14
hg18_v1_chr3_-_152173475_152173475	0.110312	SOX2.p2	AF482697|CLRN1|7401|clarin 1	NM_001195794|CLRN1|7401|clarin 1	NM_174878|CLRN1|7401|clarin 1
hg18_v1_chr14_-_22825072_22825147	0.110038	SOX2.p2	AB037864|HOMEZ|57594|homeobox and leucine zipper encoding	AF463523|HOMEZ|57594|homeobox and leucine zipper encoding	AK296927|HOMEZ|57594|homeobox and leucine zipper encoding
hg18_v1_chr6_+_47774247_47774260	0.109889	SOX2.p2	AK095395|GPR115|221393|G protein-coupled receptor 115	NM_153838|GPR115|221393|G protein-coupled receptor 115	DQ315370|GPR115|221393|G protein-coupled receptor 115
hg18_v1_chr5_+_156752739_156752794	0.109868	SOX2.p2	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2
hg18_v1_chr13_-_60887655_60887655	0.109813	SOX2.p2	AK289924|PCDH20|64881|protocadherin 20	NM_022843|PCDH20|64881|protocadherin 20
hg18_v1_chr12_+_18782307_18782468	0.109801	SOX2.p2	BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3
hg18_v1_chr3_-_120347571_120347604	0.109607	SOX2.p2	AK097667|IGSF11|152404|immunoglobulin superfamily, member 11	NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11	AK292387|IGSF11|152404|immunoglobulin superfamily, member 11
hg18_v1_chr11_-_82460518_82460525	0.109488	SOX2.p2	AK312323|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr1_+_157526127_157526127	0.109375	SOX2.p2	NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg18_v1_chr1_-_153109349_153109391	0.109283	SOX2.p2	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg18_v1_chr2_+_54536780_54537452	0.108988	SOX2.p2	NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1
hg18_v1_chr8_+_98725670_98725908	0.108981	SOX2.p2	BC022825|MTDH|92140|metadherin	BC009324|MTDH|92140|metadherin	AF411226|MTDH|92140|metadherin	CR606229|MTDH|92140|metadherin	AY082966|MTDH|92140|metadherin	AY974040|MTDH|92140|metadherin
hg18_v1_chr2_+_170298487_170298676	0.108905	SOX2.p2	
hg18_v1_chr8_-_17315171_17315230	0.108856	SOX2.p2	AK294468|MTMR7|9108|myotubularin related protein 7	BC130577|MTMR7|9108|myotubularin related protein 7	BC130579|MTMR7|9108|myotubularin related protein 7	CR749240|MTMR7|9108|myotubularin related protein 7	AK316022|MTMR7|9108|myotubularin related protein 7	AK316283|MTMR7|9108|myotubularin related protein 7
hg18_v1_chrX_+_152565849_152566020	0.108819	SOX2.p2	BC060837|DUSP9|1852|dual specificity phosphatase 9
hg18_v1_chr2_+_148318520_148318654	0.108747	SOX2.p2	AK301629|ACVR2A|92|activin A receptor, type IIA	M93415|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr12_-_47869067_47869133	0.108741	SOX2.p2	CR617927|TUBA1A|7846|tubulin, alpha 1a	BC006468|TUBA1A|7846|tubulin, alpha 1a	CR621641|TUBA1A|7846|tubulin, alpha 1a	CR596750|TUBA1A|7846|tubulin, alpha 1a	CR606172|TUBA1A|7846|tubulin, alpha 1a	CR608442|TUBA1A|7846|tubulin, alpha 1a	CR610265|TUBA1A|7846|tubulin, alpha 1a	CR607378|TUBA1A|7846|tubulin, alpha 1a	CR615137|TUBA1A|7846|tubulin, alpha 1a	CR618187|TUBA1A|7846|tubulin, alpha 1a	CR620195|TUBA1A|7846|tubulin, alpha 1a	CR595876|TUBA1A|7846|tubulin, alpha 1a	CR608373|TUBA1A|7846|tubulin, alpha 1a	CR605491|TUBA1A|7846|tubulin, alpha 1a	CR607118|TUBA1A|7846|tubulin, alpha 1a	CR590541|TUBA1A|7846|tubulin, alpha 1a	CR591654|TUBA1A|7846|tubulin, alpha 1a	CR597918|TUBA1A|7846|tubulin, alpha 1a	CR598057|TUBA1A|7846|tubulin, alpha 1a	CR598989|TUBA1A|7846|tubulin, alpha 1a	CR602824|TUBA1A|7846|tubulin, alpha 1a	CR604529|TUBA1A|7846|tubulin, alpha 1a	CR605616|TUBA1A|7846|tubulin, alpha 1a	CR607200|TUBA1A|7846|tubulin, alpha 1a	CR610101|TUBA1A|7846|tubulin, alpha 1a	CR611043|TUBA1A|7846|tubulin, alpha 1a	CR616036|TUBA1A|7846|tubulin, alpha 1a	CR621097|TUBA1A|7846|tubulin, alpha 1a	CR622155|TUBA1A|7846|tubulin, alpha 1a	CR623663|TUBA1A|7846|tubulin, alpha 1a	CR624192|TUBA1A|7846|tubulin, alpha 1a	BC050637|TUBA1A|7846|tubulin, alpha 1a	CR590950|TUBA1A|7846|tubulin, alpha 1a	CR592146|TUBA1A|7846|tubulin, alpha 1a	CR593050|TUBA1A|7846|tubulin, alpha 1a	CR595385|TUBA1A|7846|tubulin, alpha 1a	CR596815|TUBA1A|7846|tubulin, alpha 1a	CR597522|TUBA1A|7846|tubulin, alpha 1a	CR598945|TUBA1A|7846|tubulin, alpha 1a	CR601913|TUBA1A|7846|tubulin, alpha 1a	CR602723|TUBA1A|7846|tubulin, alpha 1a	CR604076|TUBA1A|7846|tubulin, alpha 1a	CR606863|TUBA1A|7846|tubulin, alpha 1a	CR607886|TUBA1A|7846|tubulin, alpha 1a	CR608895|TUBA1A|7846|tubulin, alpha 1a	CR609424|TUBA1A|7846|tubulin, alpha 1a	CR610065|TUBA1A|7846|tubulin, alpha 1a	CR612996|TUBA1A|7846|tubulin, alpha 1a	CR616525|TUBA1A|7846|tubulin, alpha 1a	CR616897|TUBA1A|7846|tubulin, alpha 1a	CR605985|TUBA1A|7846|tubulin, alpha 1a	CR593320|TUBA1A|7846|tubulin, alpha 1a	CR621268|TUBA1A|7846|tubulin, alpha 1a	CR594062|TUBA1A|7846|tubulin, alpha 1a	CR596970|TUBA1A|7846|tubulin, alpha 1a	CR596983|TUBA1A|7846|tubulin, alpha 1a	CR600175|TUBA1A|7846|tubulin, alpha 1a	CR604014|TUBA1A|7846|tubulin, alpha 1a	CR614212|TUBA1A|7846|tubulin, alpha 1a	CR624073|TUBA1A|7846|tubulin, alpha 1a	CR591504|TUBA1A|7846|tubulin, alpha 1a	CR593739|TUBA1A|7846|tubulin, alpha 1a	CR604006|TUBA1A|7846|tubulin, alpha 1a	CR622591|TUBA1A|7846|tubulin, alpha 1a	CR623826|TUBA1A|7846|tubulin, alpha 1a	CR625536|TUBA1A|7846|tubulin, alpha 1a	AF141347|TUBA1A|7846|tubulin, alpha 1a	CR592638|TUBA1A|7846|tubulin, alpha 1a	CR614316|TUBA1A|7846|tubulin, alpha 1a	CR593244|TUBA1A|7846|tubulin, alpha 1a	CR593317|TUBA1A|7846|tubulin, alpha 1a	CR600113|TUBA1A|7846|tubulin, alpha 1a	CR600854|TUBA1A|7846|tubulin, alpha 1a	CR602040|TUBA1A|7846|tubulin, alpha 1a	CR606118|TUBA1A|7846|tubulin, alpha 1a	CR607379|TUBA1A|7846|tubulin, alpha 1a	CR608614|TUBA1A|7846|tubulin, alpha 1a	CR614334|TUBA1A|7846|tubulin, alpha 1a	CR616625|TUBA1A|7846|tubulin, alpha 1a	CR618923|TUBA1A|7846|tubulin, alpha 1a	CR619222|TUBA1A|7846|tubulin, alpha 1a	CR621713|TUBA1A|7846|tubulin, alpha 1a	CR626181|TUBA1A|7846|tubulin, alpha 1a	CR592123|TUBA1A|7846|tubulin, alpha 1a	CR593994|TUBA1A|7846|tubulin, alpha 1a	CR601586|TUBA1A|7846|tubulin, alpha 1a	CR609811|TUBA1A|7846|tubulin, alpha 1a	CR612526|TUBA1A|7846|tubulin, alpha 1a	CR598412|TUBA1A|7846|tubulin, alpha 1a	CR607887|TUBA1A|7846|tubulin, alpha 1a	CR619513|TUBA1A|7846|tubulin, alpha 1a	CR600932|TUBA1A|7846|tubulin, alpha 1a	CR604714|TUBA1A|7846|tubulin, alpha 1a	CR605195|TUBA1A|7846|tubulin, alpha 1a	CR614350|TUBA1A|7846|tubulin, alpha 1a	CR616051|TUBA1A|7846|tubulin, alpha 1a	CR621897|TUBA1A|7846|tubulin, alpha 1a	CR626048|TUBA1A|7846|tubulin, alpha 1a	CR591464|TUBA1A|7846|tubulin, alpha 1a	CR618255|TUBA1A|7846|tubulin, alpha 1a	CR592696|TUBA1A|7846|tubulin, alpha 1a	CR600390|TUBA1A|7846|tubulin, alpha 1a	CR604534|TUBA1A|7846|tubulin, alpha 1a	CR616952|TUBA1A|7846|tubulin, alpha 1a	CR618736|TUBA1A|7846|tubulin, alpha 1a	CR625013|TUBA1A|7846|tubulin, alpha 1a	CR590305|TUBA1A|7846|tubulin, alpha 1a	CR590348|TUBA1A|7846|tubulin, alpha 1a	CR590896|TUBA1A|7846|tubulin, alpha 1a	CR591133|TUBA1A|7846|tubulin, alpha 1a	CR591241|TUBA1A|7846|tubulin, alpha 1a	CR591515|TUBA1A|7846|tubulin, alpha 1a	CR593877|TUBA1A|7846|tubulin, alpha 1a	CR594034|TUBA1A|7846|tubulin, alpha 1a	CR594060|TUBA1A|7846|tubulin, alpha 1a	CR594066|TUBA1A|7846|tubulin, alpha 1a	CR594647|TUBA1A|7846|tubulin, alpha 1a	CR595260|TUBA1A|7846|tubulin, alpha 1a	CR595514|TUBA1A|7846|tubulin, alpha 1a	CR596417|TUBA1A|7846|tubulin, alpha 1a	CR596908|TUBA1A|7846|tubulin, alpha 1a	CR598075|TUBA1A|7846|tubulin, alpha 1a	CR598102|TUBA1A|7846|tubulin, alpha 1a	CR598675|TUBA1A|7846|tubulin, alpha 1a	CR599102|TUBA1A|7846|tubulin, alpha 1a	CR599543|TUBA1A|7846|tubulin, alpha 1a	CR600172|TUBA1A|7846|tubulin, alpha 1a	CR600829|TUBA1A|7846|tubulin, alpha 1a	CR602196|TUBA1A|7846|tubulin, alpha 1a	CR602663|TUBA1A|7846|tubulin, alpha 1a	CR602913|TUBA1A|7846|tubulin, alpha 1a	CR603945|TUBA1A|7846|tubulin, alpha 1a	CR604782|TUBA1A|7846|tubulin, alpha 1a	CR604788|TUBA1A|7846|tubulin, alpha 1a	CR605308|TUBA1A|7846|tubulin, alpha 1a	CR605536|TUBA1A|7846|tubulin, alpha 1a	CR608160|TUBA1A|7846|tubulin, alpha 1a	CR608525|TUBA1A|7846|tubulin, alpha 1a	CR608804|TUBA1A|7846|tubulin, alpha 1a	CR608850|TUBA1A|7846|tubulin, alpha 1a	CR610612|TUBA1A|7846|tubulin, alpha 1a	CR610649|TUBA1A|7846|tubulin, alpha 1a	CR611347|TUBA1A|7846|tubulin, alpha 1a	CR612458|TUBA1A|7846|tubulin, alpha 1a	CR612699|TUBA1A|7846|tubulin, alpha 1a	CR613508|TUBA1A|7846|tubulin, alpha 1a	CR613952|TUBA1A|7846|tubulin, alpha 1a	CR615495|TUBA1A|7846|tubulin, alpha 1a	CR615697|TUBA1A|7846|tubulin, alpha 1a	CR615711|TUBA1A|7846|tubulin, alpha 1a	CR615724|TUBA1A|7846|tubulin, alpha 1a	CR616370|TUBA1A|7846|tubulin, alpha 1a	CR616410|TUBA1A|7846|tubulin, alpha 1a	CR616875|TUBA1A|7846|tubulin, alpha 1a	CR616978|TUBA1A|7846|tubulin, alpha 1a	CR616979|TUBA1A|7846|tubulin, alpha 1a	CR616980|TUBA1A|7846|tubulin, alpha 1a	CR618385|TUBA1A|7846|tubulin, alpha 1a	CR618711|TUBA1A|7846|tubulin, alpha 1a	CR618941|TUBA1A|7846|tubulin, alpha 1a	CR619454|TUBA1A|7846|tubulin, alpha 1a	CR619658|TUBA1A|7846|tubulin, alpha 1a	CR619965|TUBA1A|7846|tubulin, alpha 1a	CR620710|TUBA1A|7846|tubulin, alpha 1a	CR620745|TUBA1A|7846|tubulin, alpha 1a	CR620859|TUBA1A|7846|tubulin, alpha 1a	CR622451|TUBA1A|7846|tubulin, alpha 1a	CR622843|TUBA1A|7846|tubulin, alpha 1a	CR624888|TUBA1A|7846|tubulin, alpha 1a	CR625134|TUBA1A|7846|tubulin, alpha 1a	CR625301|TUBA1A|7846|tubulin, alpha 1a	CR626848|TUBA1A|7846|tubulin, alpha 1a	CR592034|TUBA1A|7846|tubulin, alpha 1a	CR593029|TUBA1A|7846|tubulin, alpha 1a	CR603623|TUBA1A|7846|tubulin, alpha 1a	CR613183|TUBA1A|7846|tubulin, alpha 1a	CR618339|TUBA1A|7846|tubulin, alpha 1a	CR623665|TUBA1A|7846|tubulin, alpha 1a	CR626392|TUBA1A|7846|tubulin, alpha 1a	CR604467|TUBA1A|7846|tubulin, alpha 1a	CR601584|TUBA1A|7846|tubulin, alpha 1a	CR604072|TUBA1A|7846|tubulin, alpha 1a	CR614572|TUBA1A|7846|tubulin, alpha 1a	CR617729|TUBA1A|7846|tubulin, alpha 1a	CR618708|TUBA1A|7846|tubulin, alpha 1a	CR590784|TUBA1A|7846|tubulin, alpha 1a	CR615205|TUBA1A|7846|tubulin, alpha 1a	CR590984|TUBA1A|7846|tubulin, alpha 1a	CR591011|TUBA1A|7846|tubulin, alpha 1a	CR591275|TUBA1A|7846|tubulin, alpha 1a	CR591653|TUBA1A|7846|tubulin, alpha 1a	CR591655|TUBA1A|7846|tubulin, alpha 1a	CR592062|TUBA1A|7846|tubulin, alpha 1a	CR592132|TUBA1A|7846|tubulin, alpha 1a	CR592293|TUBA1A|7846|tubulin, alpha 1a	CR592430|TUBA1A|7846|tubulin, alpha 1a	CR592537|TUBA1A|7846|tubulin, alpha 1a	CR592708|TUBA1A|7846|tubulin, alpha 1a	CR593264|TUBA1A|7846|tubulin, alpha 1a	CR593488|TUBA1A|7846|tubulin, alpha 1a	CR594084|TUBA1A|7846|tubulin, alpha 1a	CR594550|TUBA1A|7846|tubulin, alpha 1a	CR595041|TUBA1A|7846|tubulin, alpha 1a	CR595457|TUBA1A|7846|tubulin, alpha 1a	CR596285|TUBA1A|7846|tubulin, alpha 1a	CR596409|TUBA1A|7846|tubulin, alpha 1a	CR596836|TUBA1A|7846|tubulin, alpha 1a	CR597413|TUBA1A|7846|tubulin, alpha 1a	CR597725|TUBA1A|7846|tubulin, alpha 1a	CR598217|TUBA1A|7846|tubulin, alpha 1a	CR598369|TUBA1A|7846|tubulin, alpha 1a	CR598408|TUBA1A|7846|tubulin, alpha 1a	CR598516|TUBA1A|7846|tubulin, alpha 1a	CR598719|TUBA1A|7846|tubulin, alpha 1a	CR598958|TUBA1A|7846|tubulin, alpha 1a	CR598973|TUBA1A|7846|tubulin, alpha 1a	CR599248|TUBA1A|7846|tubulin, alpha 1a	CR599666|TUBA1A|7846|tubulin, alpha 1a	CR599962|TUBA1A|7846|tubulin, alpha 1a	CR600079|TUBA1A|7846|tubulin, alpha 1a	CR600126|TUBA1A|7846|tubulin, alpha 1a	CR600236|TUBA1A|7846|tubulin, alpha 1a	CR600237|TUBA1A|7846|tubulin, alpha 1a	CR601427|TUBA1A|7846|tubulin, alpha 1a	CR601535|TUBA1A|7846|tubulin, alpha 1a	CR601951|TUBA1A|7846|tubulin, alpha 1a	CR602360|TUBA1A|7846|tubulin, alpha 1a	CR602775|TUBA1A|7846|tubulin, alpha 1a	CR603584|TUBA1A|7846|tubulin, alpha 1a	CR603604|TUBA1A|7846|tubulin, alpha 1a	CR603752|TUBA1A|7846|tubulin, alpha 1a	CR603942|TUBA1A|7846|tubulin, alpha 1a	CR603969|TUBA1A|7846|tubulin, alpha 1a	CR605154|TUBA1A|7846|tubulin, alpha 1a	CR605304|TUBA1A|7846|tubulin, alpha 1a	CR606121|TUBA1A|7846|tubulin, alpha 1a	CR606970|TUBA1A|7846|tubulin, alpha 1a	CR607235|TUBA1A|7846|tubulin, alpha 1a	CR607284|TUBA1A|7846|tubulin, alpha 1a	CR607806|TUBA1A|7846|tubulin, alpha 1a	CR607938|TUBA1A|7846|tubulin, alpha 1a	CR607971|TUBA1A|7846|tubulin, alpha 1a	CR608399|TUBA1A|7846|tubulin, alpha 1a	CR608967|TUBA1A|7846|tubulin, alpha 1a	CR609323|TUBA1A|7846|tubulin, alpha 1a	CR609686|TUBA1A|7846|tubulin, alpha 1a	CR610674|TUBA1A|7846|tubulin, alpha 1a	CR610761|TUBA1A|7846|tubulin, alpha 1a	CR611047|TUBA1A|7846|tubulin, alpha 1a	CR611222|TUBA1A|7846|tubulin, alpha 1a	CR611610|TUBA1A|7846|tubulin, alpha 1a	CR611647|TUBA1A|7846|tubulin, alpha 1a	CR612520|TUBA1A|7846|tubulin, alpha 1a	CR613002|TUBA1A|7846|tubulin, alpha 1a	CR614113|TUBA1A|7846|tubulin, alpha 1a	CR614118|TUBA1A|7846|tubulin, alpha 1a	CR614378|TUBA1A|7846|tubulin, alpha 1a	CR614551|TUBA1A|7846|tubulin, alpha 1a	CR615075|TUBA1A|7846|tubulin, alpha 1a	CR615166|TUBA1A|7846|tubulin, alpha 1a	CR616032|TUBA1A|7846|tubulin, alpha 1a	CR616068|TUBA1A|7846|tubulin, alpha 1a	CR616371|TUBA1A|7846|tubulin, alpha 1a	CR616965|TUBA1A|7846|tubulin, alpha 1a	CR617030|TUBA1A|7846|tubulin, alpha 1a	CR617789|TUBA1A|7846|tubulin, alpha 1a	CR618788|TUBA1A|7846|tubulin, alpha 1a	CR619179|TUBA1A|7846|tubulin, alpha 1a	CR619445|TUBA1A|7846|tubulin, alpha 1a	CR619898|TUBA1A|7846|tubulin, alpha 1a	CR620189|TUBA1A|7846|tubulin, alpha 1a	CR620492|TUBA1A|7846|tubulin, alpha 1a	CR620793|TUBA1A|7846|tubulin, alpha 1a	CR621215|TUBA1A|7846|tubulin, alpha 1a	CR621574|TUBA1A|7846|tubulin, alpha 1a	CR621901|TUBA1A|7846|tubulin, alpha 1a	CR622543|TUBA1A|7846|tubulin, alpha 1a	CR623135|TUBA1A|7846|tubulin, alpha 1a	CR623412|TUBA1A|7846|tubulin, alpha 1a	CR623579|TUBA1A|7846|tubulin, alpha 1a	CR624173|TUBA1A|7846|tubulin, alpha 1a	CR624183|TUBA1A|7846|tubulin, alpha 1a	CR624685|TUBA1A|7846|tubulin, alpha 1a	CR624772|TUBA1A|7846|tubulin, alpha 1a	CR625764|TUBA1A|7846|tubulin, alpha 1a	CR626641|TUBA1A|7846|tubulin, alpha 1a	CR594477|TUBA1A|7846|tubulin, alpha 1a	AK057842|TUBA1A|7846|tubulin, alpha 1a	AK297775|TUBA1A|7846|tubulin, alpha 1a	BC057823|TUBA1A|7846|tubulin, alpha 1a	NM_006009|TUBA1A|7846|tubulin, alpha 1a	AK298838|TUBA1A|7846|tubulin, alpha 1a	CR612808|TUBA1A|7846|tubulin, alpha 1a	CR624125|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr2_-_192420168_192420265	0.108738	SOX2.p2	AK290378|SDPR|8436|serum deprivation response	NM_004657|SDPR|8436|serum deprivation response
hg18_v1_chr19_-_62759536_62759536	0.10851	SOX2.p2	EU446587|ZNF550|162972|zinc finger protein 550	NM_001039654|ZNF550|162972|zinc finger protein 550
hg18_v1_chr5_-_36912487_36912554	0.108462	SOX2.p2	AK000901|LOC646719|646719|hypothetical LOC646719
hg18_v1_chr16_-_45339605_45339721	0.108301	SOX2.p2	AB451455|MYLK3|91807|myosin light chain kinase 3	BC109096|MYLK3|91807|myosin light chain kinase 3	BC109097|MYLK3|91807|myosin light chain kinase 3	AJ247087|MYLK3|91807|myosin light chain kinase 3	NM_182493|MYLK3|91807|myosin light chain kinase 3
hg18_v1_chr11_+_113776504_113776578	0.108275	SOX2.p2	AK312619|RBM7|10179|RNA binding motif protein 7	AK002015|RBM7|10179|RNA binding motif protein 7	AB209753|RBM7|10179|RNA binding motif protein 7	AK225667|RBM7|10179|RNA binding motif protein 7
hg18_v1_chr3_+_44601457_44601463	0.108222	SOX2.p2	AK094189|ZNF660|285349|zinc finger protein 660	NM_173658|ZNF660|285349|zinc finger protein 660
hg18_v1_chr4_-_107508040_107508040	0.10784	SOX2.p2	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like
hg18_v1_chr17_+_54652609_54652752	0.107536	SOX2.p2	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1	EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1
hg18_v1_chr6_-_25679197_25679277	0.107532	SOX2.p2	
hg18_v1_chr11_+_43622348_43622372	0.107363	SOX2.p2	
hg18_v1_chr3_-_15348811_15349080	0.107329	SOX2.p2	BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR601004|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	CR592833|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)
hg18_v1_chr19_+_7566698_7566944	0.107308	SOX2.p2	BC035808|KIAA1543|57662|KIAA1543	NM_001080429|KIAA1543|57662|KIAA1543	NM_020902|KIAA1543|57662|KIAA1543	BC020431|KIAA1543|57662|KIAA1543
hg18_v1_chr3_+_19164973_19165044	0.107116	SOX2.p2	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8
hg18_v1_chr3_-_188935363_188935388	0.107017	SOX2.p2	EU139066|BCL6|604|B-cell CLL/lymphoma 6	NM_001134738|BCL6|604|B-cell CLL/lymphoma 6
hg18_v1_chr2_-_39517633_39517794	0.106989	SOX2.p2	EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr19_-_62659665_62659707	0.106867	SOX2.p2	AF255342|VN1R1|57191|vomeronasal 1 receptor 1	AF302903|VN1R1|57191|vomeronasal 1 receptor 1	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1	BC095508|VN1R1|57191|vomeronasal 1 receptor 1
hg18_v1_chr3_+_180763432_180763439	0.106781	SOX2.p2	AF041474|ACTL6A|86|actin-like 6A	CR594699|ACTL6A|86|actin-like 6A
hg18_v1_chr8_+_11697616_11697678	0.106737	SOX2.p2	CR614222|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR618448|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR590560|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617638|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595860|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR601044|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR603264|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR604624|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR617288|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR621292|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602204|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr1_-_175400665_175400731	0.106634	SOX2.p2	AK309094|ASTN1|460|astrotactin 1
hg18_v1_chr1_-_191422346_191422365	0.106551	SOX2.p2	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
hg18_v1_chr1_+_224317044_224317055	0.106469	SOX2.p2	AK291102|LOC440926|440926|H3 histone, family 3A pseudogene	AK293541|H3F3A|3020|H3 histone, family 3A	BC029405|H3F3A|3020|H3 histone, family 3A	BC067757|LOC440926|440926|H3 histone, family 3A pseudogene	BC095447|H3F3A|3020|H3 histone, family 3A	M11354|H3F3A|3020|H3 histone, family 3A	CR616566|LOC440926|440926|H3 histone, family 3A pseudogene	BC066901|LOC440926|440926|H3 histone, family 3A pseudogene	CR592641|H3F3A|3020|H3 histone, family 3A	CR618614|LOC440926|440926|H3 histone, family 3A pseudogene	CR620119|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr5_+_110455768_110455948	0.106143	SOX2.p2	AF385437|WDR36|134430|WD repeat domain 36	NM_139281|WDR36|134430|WD repeat domain 36	BC133025|WDR36|134430|WD repeat domain 36	BC136517|WDR36|134430|WD repeat domain 36	AK095312|WDR36|134430|WD repeat domain 36	AL832494|WDR36|134430|WD repeat domain 36
hg18_v1_chr3_+_73193499_73193499	0.10607	SOX2.p2	BC051316|EBLN2|55096|endogenous Borna-like N element-2	BC064501|EBLN2|55096|endogenous Borna-like N element-2	NM_018029|EBLN2|55096|endogenous Borna-like N element-2
hg18_v1_chr16_+_66902369_66902551	0.106039	SOX2.p2	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7	NM_019023|PRMT7|54496|protein arginine methyltransferase 7	AK001502|PRMT7|54496|protein arginine methyltransferase 7	AK304605|PRMT7|54496|protein arginine methyltransferase 7	CR604457|PRMT7|54496|protein arginine methyltransferase 7	AK056647|PRMT7|54496|protein arginine methyltransferase 7
hg18_v1_chr4_-_153675602_153675886	0.10603	SOX2.p2	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7	BC117246|FBXW7|55294|F-box and WD repeat domain containing 7	BC143944|FBXW7|55294|F-box and WD repeat domain containing 7	NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7	CR749305|FBXW7|55294|F-box and WD repeat domain containing 7
hg18_v1_chr2_+_89715037_89715081	0.10588	SOX2.p2	
hg18_v1_chr9_+_106306275_106306364	0.105823	SOX2.p2	BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1	NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1
hg18_v1_chr5_+_177368294_177368294	0.105566	SOX2.p2	NM_001079527|FAM153C|653316|family with sequence similarity 153, member C
hg18_v1_chr6_+_131613196_131613400	0.105436	SOX2.p2	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7	NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118601|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC118606|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128398|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC128399|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141926|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC141927|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC094732|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC073847|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC063499|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK290271|AKAP7|9465|A kinase (PRKA) anchor protein 7	AK311820|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC110897|AKAP7|9465|A kinase (PRKA) anchor protein 7	BC016927|AKAP7|9465|A kinase (PRKA) anchor protein 7	AF161075|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451273|AKAP7|9465|A kinase (PRKA) anchor protein 7	AB451400|AKAP7|9465|A kinase (PRKA) anchor protein 7
hg18_v1_chr14_-_88953059_88953268	0.105353	SOX2.p2	BC007506|FOXN3|1112|forkhead box N3	NM_005197|FOXN3|1112|forkhead box N3
hg18_v1_chr4_+_83570980_83571006	0.105256	SOX2.p2	CR457141|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr14_+_23508922_23509155	0.105177	SOX2.p2	NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2	GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2
hg18_v1_chr12_+_119418299_119418347	0.104962	SOX2.p2	CR590506|DYNLL1|8655|dynein, light chain, LC8-type 1	CR619359|DYNLL1|8655|dynein, light chain, LC8-type 1	BC100289|DYNLL1|8655|dynein, light chain, LC8-type 1	CR607733|DYNLL1|8655|dynein, light chain, LC8-type 1	U32944|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104244|DYNLL1|8655|dynein, light chain, LC8-type 1	BC104245|DYNLL1|8655|dynein, light chain, LC8-type 1	CR609172|DYNLL1|8655|dynein, light chain, LC8-type 1
hg18_v1_chr8_+_11697680_11697700	0.104903	SOX2.p2	CR602686|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC003573|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC009251|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR605887|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR598732|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610871|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR622798|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	S76822|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602602|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR595075|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr18_+_54039818_54039842	0.104838	SOX2.p2	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr15_+_80741876_80742015	0.104759	SOX2.p2	BC007811|LOC80154|80154|hypothetical LOC80154	BC065260|LOC80154|80154|hypothetical LOC80154	AK026448|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr1_+_84402962_84402974	0.104302	SOX2.p2	BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta
hg18_v1_chr2_-_121875610_121875641	0.104155	SOX2.p2	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1
hg18_v1_chr4_-_151990061_151990138	0.10415	SOX2.p2	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing
hg18_v1_chr3_+_159310631_159310638	0.104127	SOX2.p2	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr8_+_17824781_17824789	0.104108	SOX2.p2	BC000453|PCM1|5108|pericentriolar material 1
hg18_v1_chr12_-_69434598_69434637	0.103854	SOX2.p2	X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	CR625935|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr8_+_64243662_64243735	0.103706	SOX2.p2	NM_152758|YTHDF3|253943|YTH domain family, member 3	BC052970|YTHDF3|253943|YTH domain family, member 3	AK127574|YTHDF3|253943|YTH domain family, member 3	AL832005|YTHDF3|253943|YTH domain family, member 3	BX537996|YTHDF3|253943|YTH domain family, member 3
hg18_v1_chr6_-_55848346_55848351	0.103633	SOX2.p2	AK291559|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr4_-_170428564_170428680	0.103628	SOX2.p2	BC053671|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr2_-_20413838_20413962	0.103533	SOX2.p2	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)	AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)
hg18_v1_chr3_+_89239363_89239460	0.103367	SOX2.p2	AF213459|EPHA3|2042|EPH receptor A3	NM_005233|EPHA3|2042|EPH receptor A3	NM_182644|EPHA3|2042|EPH receptor A3	BC063282|EPHA3|2042|EPH receptor A3
hg18_v1_chr5_+_139008209_139008493	0.103361	SOX2.p2	AB097005|CXXC5|51523|CXXC finger protein 5	AB097032|CXXC5|51523|CXXC finger protein 5	NM_016463|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr14_-_106289751_106290256	0.103195	SOX2.p2	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1	BX640620|IGHM|3507|immunoglobulin heavy constant mu
hg18_v1_chr5_-_137882303_137882450	0.102997	SOX2.p2	CR622518|ETF1|2107|eukaryotic translation termination factor 1	BT007374|ETF1|2107|eukaryotic translation termination factor 1	DQ890706|ETF1|2107|eukaryotic translation termination factor 1	DQ893890|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr4_-_54119159_54119192	0.102814	SOX2.p2	NM_032622|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr11_+_62893836_62894104	0.102671	SOX2.p2	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9
hg18_v1_chr8_-_17315386_17315410	0.102524	SOX2.p2	NM_004686|MTMR7|9108|myotubularin related protein 7
hg18_v1_chr5_+_140200995_140201090	0.102519	SOX2.p2	BC136749|PCDHA8|56140|protocadherin alpha 8	BC136750|PCDHA8|56140|protocadherin alpha 8	AF152316|PCDHA8|56140|protocadherin alpha 8	AF152486|PCDHA8|56140|protocadherin alpha 8	NM_018911|PCDHA8|56140|protocadherin alpha 8	NM_031856|PCDHA8|56140|protocadherin alpha 8
hg18_v1_chr15_+_64481270_64481273	0.1025	SOX2.p2	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1
hg18_v1_chr15_+_80741827_80741867	0.102289	SOX2.p2	AK309746|LOC80154|80154|hypothetical LOC80154	AK310769|LOC80154|80154|hypothetical LOC80154	BC072390|LOC80154|80154|hypothetical LOC80154	AK291684|LOC80154|80154|hypothetical LOC80154	AK309420|LOC80154|80154|hypothetical LOC80154	AK307285|LOC80154|80154|hypothetical LOC80154
hg18_v1_chr8_+_76614757_76614781	0.102287	SOX2.p2	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma	NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma	EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma
hg18_v1_chr10_+_4995453_4995576	0.102286	SOX2.p2	NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)
hg18_v1_chr21_+_36364091_36364156	0.102218	SOX2.p2	AB124848|CBR1|873|carbonyl reductase 1	CR626808|CBR1|873|carbonyl reductase 1	NM_001757|CBR1|873|carbonyl reductase 1	CR618962|CBR1|873|carbonyl reductase 1
hg18_v1_chr13_-_20533703_20533729	0.102176	SOX2.p2	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr3_+_180348818_180349046	0.102148	SOX2.p2	NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide
hg18_v1_chr4_+_100714995_100715066	0.102016	SOX2.p2	AK225328|MTTP|4547|microsomal triglyceride transfer protein	BC062696|MTTP|4547|microsomal triglyceride transfer protein	X59657|MTTP|4547|microsomal triglyceride transfer protein	AK290793|MTTP|4547|microsomal triglyceride transfer protein	CR596497|MTTP|4547|microsomal triglyceride transfer protein	BC125110|MTTP|4547|microsomal triglyceride transfer protein	BC125111|MTTP|4547|microsomal triglyceride transfer protein	X75500|MTTP|4547|microsomal triglyceride transfer protein	X91148|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr15_-_62782399_62782413	0.102007	SOX2.p2	BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2	BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2	BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr14_-_22974707_22974710	0.102001	SOX2.p2	AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta	NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta
hg18_v1_chr6_+_36752244_36752244	0.101906	SOX2.p2	NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)
hg18_v1_chr15_-_72282146_72282272	0.101763	SOX2.p2	AK298928|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AF370419|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BC025256|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK309676|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_001199042|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	NM_022369|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr7_-_76667045_76667100	0.101696	SOX2.p2	GQ129349|FGL2|10875|fibrinogen-like 2	GQ129350|FGL2|10875|fibrinogen-like 2	AK222999|FGL2|10875|fibrinogen-like 2	AK312672|FGL2|10875|fibrinogen-like 2	BC073986|FGL2|10875|fibrinogen-like 2	BC017813|FGL2|10875|fibrinogen-like 2	BC033820|FGL2|10875|fibrinogen-like 2	CR610336|FGL2|10875|fibrinogen-like 2	Z36531|FGL2|10875|fibrinogen-like 2	NM_006682|FGL2|10875|fibrinogen-like 2
hg18_v1_chr9_+_126460511_126460540	0.101618	SOX2.p2	
hg18_v1_chr10_+_96433240_96433566	0.101603	SOX2.p2	NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18	AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18
hg18_v1_chr1_+_181075104_181075163	0.101586	SOX2.p2	AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9
hg18_v1_chr8_-_93177057_93177057	0.101545	SOX2.p2	NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr12_+_55808696_55808765	0.101459	SOX2.p2	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1
hg18_v1_chr10_-_128199986_128199999	0.101373	SOX2.p2	BC140898|C10orf90|118611|chromosome 10 open reading frame 90	BC146869|C10orf90|118611|chromosome 10 open reading frame 90	AK057500|C10orf90|118611|chromosome 10 open reading frame 90	NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90
hg18_v1_chr4_-_170428768_170428823	0.101118	SOX2.p2	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr17_+_73511843_73511912	0.101109	SOX2.p2	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C	NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C	NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C
hg18_v1_chrX_-_138114100_138114173	0.101107	SOX2.p2	AF108756|FGF13|2258|fibroblast growth factor 13	AK316170|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr11_-_55757236_55757312	0.101034	SOX2.p2	NM_001004746|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2	BC136876|OR5T2|219464|olfactory receptor, family 5, subfamily T, member 2
hg18_v1_chr12_+_49185011_49185034	0.101026	SOX2.p2	AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr3_+_134601479_134601617	0.100962	SOX2.p2	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin	BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin	U48224|BFSP2|8419|beaded filament structural protein 2, phakinin
hg18_v1_chr7_-_97439500_97439561	0.100873	SOX2.p2	BC015431|MGC72080|389538|MGC72080 pseudogene	BC042035|MGC72080|389538|MGC72080 pseudogene
hg18_v1_chr1_+_183970093_183970305	0.100562	SOX2.p2	AF156100|HMCN1|83872|hemicentin 1	NM_031935|HMCN1|83872|hemicentin 1
hg18_v1_chr4_-_170428681_170428684	0.10043	SOX2.p2	AK021429|SH3RF1|57630|SH3 domain containing ring finger 1
hg18_v1_chr6_+_153113624_153113734	0.100399	SOX2.p2	AK313950|VIP|7432|vasoactive intestinal peptide	BC009794|VIP|7432|vasoactive intestinal peptide	NM_003381|VIP|7432|vasoactive intestinal peptide	NM_194435|VIP|7432|vasoactive intestinal peptide	CR593090|VIP|7432|vasoactive intestinal peptide	AK291959|VIP|7432|vasoactive intestinal peptide	M36634|VIP|7432|vasoactive intestinal peptide
hg18_v1_chr9_-_14076901_14077003	0.100368	SOX2.p2	BX537698|NFIB|4781|nuclear factor I/B
hg18_v1_chr1_+_89871281_89871424	0.100282	SOX2.p2	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C	AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C	BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr11_-_82460531_82460560	0.100193	SOX2.p2	BC014213|RAB30|27314|RAB30, member RAS oncogene family	NM_014488|RAB30|27314|RAB30, member RAS oncogene family	BX641138|RAB30|27314|RAB30, member RAS oncogene family
hg18_v1_chr2_-_179367925_179367967	0.100073	SOX2.p2	X98114|TTN|7273|titin	X98115|TTN|7273|titin
hg18_v1_chr9_-_90456824_90456894	0.0999138	SOX2.p2	BC101432|LOC286238|286238|hypothetical protein LOC286238	BC101439|LOC286238|286238|hypothetical protein LOC286238	BC101440|LOC286238|286238|hypothetical protein LOC286238	BC101442|LOC286238|286238|hypothetical protein LOC286238	AK098532|LOC286238|286238|hypothetical protein LOC286238	NM_001100111|LOC286238|286238|hypothetical protein LOC286238
hg18_v1_chr2_-_160838397_160838474	0.0997123	SOX2.p2	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr12_-_89976261_89976261	0.0996145	SOX2.p2	NM_007035|KERA|11081|keratocan
hg18_v1_chr22_+_21852743_21852858	0.0995577	SOX2.p2	AB209991|BCR|613|breakpoint cluster region
hg18_v1_chr6_-_132980901_132980924	0.0994078	SOX2.p2	AY702304|TAAR2|9287|trace amine associated receptor 2	BC067461|TAAR2|9287|trace amine associated receptor 2	BC067462|TAAR2|9287|trace amine associated receptor 2	BC067463|TAAR2|9287|trace amine associated receptor 2	NM_014626|TAAR2|9287|trace amine associated receptor 2
hg18_v1_chr8_-_93144366_93144366	0.0993209	SOX2.p2	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr16_+_66433712_66433720	0.0992929	SOX2.p2	NM_020457|THAP11|57215|THAP domain containing 11
hg18_v1_chr6_-_11887265_11887265	0.099206	SOX2.p2	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105	NM_032744|C6orf105|84830|chromosome 6 open reading frame 105
hg18_v1_chr1_+_182287388_182287578	0.0990763	SOX2.p2	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR612120|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR606046|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	CR620942|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)
hg18_v1_chr5_-_95044415_95044469	0.0987241	SOX2.p2	AY027526|SPATA9|83890|spermatogenesis associated 9	AK292338|SPATA9|83890|spermatogenesis associated 9	AK310260|SPATA9|83890|spermatogenesis associated 9	BC047333|SPATA9|83890|spermatogenesis associated 9	AK093225|SPATA9|83890|spermatogenesis associated 9	BC032832|SPATA9|83890|spermatogenesis associated 9	NM_031952|SPATA9|83890|spermatogenesis associated 9
hg18_v1_chr2_+_207115060_207115102	0.098584	SOX2.p2	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23
hg18_v1_chr10_-_28611020_28611072	0.0984491	SOX2.p2	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg18_v1_chr6_-_50124322_50124322	0.0977856	SOX2.p2	DQ012016|DEFB112|245915|defensin, beta 112	NM_001037498|DEFB112|245915|defensin, beta 112
hg18_v1_chr14_+_19473606_19473606	0.09778	SOX2.p2	BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1	NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1
hg18_v1_chr18_+_53862386_53862683	0.0976522	SOX2.p2	NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like
hg18_v1_chr5_+_139008667_139008718	0.0971427	SOX2.p2	AK001782|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr20_+_29565922_29565963	0.0970101	SOX2.p2	AF172086|HM13|81502|histocompatibility (minor) 13	BC062595|HM13|81502|histocompatibility (minor) 13	AF483215|HM13|81502|histocompatibility (minor) 13	AJ345029|HM13|81502|histocompatibility (minor) 13	AK074686|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr13_+_75108450_75108493	0.0970041	SOX2.p2	AK092052|LMO7|4008|LIM domain 7
hg18_v1_chr5_+_139008052_139008065	0.0969817	SOX2.p2	AK024338|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr1_+_184532027_184532033	0.096945	SOX2.p2	NM_001127708|PRG4|10216|proteoglycan 4	NM_001127709|PRG4|10216|proteoglycan 4	NM_001127710|PRG4|10216|proteoglycan 4	NM_005807|PRG4|10216|proteoglycan 4	AK301343|PRG4|10216|proteoglycan 4	AK057197|PRG4|10216|proteoglycan 4	AK297718|PRG4|10216|proteoglycan 4	AK301487|PRG4|10216|proteoglycan 4	AK308235|PRG4|10216|proteoglycan 4
hg18_v1_chr6_+_118976134_118976183	0.0969119	SOX2.p2	NM_002667|PLN|5350|phospholamban	M63603|PLN|5350|phospholamban	AK311799|PLN|5350|phospholamban	BC005269|PLN|5350|phospholamban
hg18_v1_chr10_+_35456095_35456188	0.0969069	SOX2.p2	D14825|CREM|1390|cAMP responsive element modulator
hg18_v1_chr4_-_158111995_158112023	0.0968838	SOX2.p2	AF091434|PDGFC|56034|platelet derived growth factor C	NM_016205|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr22_+_21852699_21852728	0.096838	SOX2.p2	BC066122|BCR|613|breakpoint cluster region
hg18_v1_chr1_-_42549347_42549350	0.0967196	SOX2.p2	
hg18_v1_chr14_-_59166976_59167061	0.0966198	SOX2.p2	CR457030|RTN1|6252|reticulon 1	L10335|RTN1|6252|reticulon 1	CR591662|RTN1|6252|reticulon 1
hg18_v1_chr6_+_50894397_50894591	0.0965177	SOX2.p2	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg18_v1_chr21_-_31332665_31332665	0.0964668	SOX2.p2	AB096964|KRTAP19-8|728299|keratin associated protein 19-8	NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8
hg18_v1_chr17_-_36587965_36587985	0.0964667	SOX2.p2	BC127252|KRTAP4-2|85291|keratin associated protein 4-2	AJ406934|KRTAP4-2|85291|keratin associated protein 4-2	NM_033062|KRTAP4-2|85291|keratin associated protein 4-2
hg18_v1_chr21_-_26345294_26345335	0.0964593	SOX2.p2	
hg18_v1_chr3_-_123584747_123584787	0.0964257	SOX2.p2	BC109378|CCDC58|131076|coiled-coil domain containing 58	BC054051|CCDC58|131076|coiled-coil domain containing 58	BC062725|CCDC58|131076|coiled-coil domain containing 58	NM_001017928|CCDC58|131076|coiled-coil domain containing 58
hg18_v1_chr11_-_77730573_77730573	0.0963818	SOX2.p2	AB011143|GAB2|9846|GRB2-associated binding protein 2	BC152459|GAB2|9846|GRB2-associated binding protein 2	NM_012296|GAB2|9846|GRB2-associated binding protein 2
hg18_v1_chr8_-_102872372_102872380	0.0962702	SOX2.p2	AK055073|NCALD|83988|neurocalcin delta	AK314523|NCALD|83988|neurocalcin delta
hg18_v1_chr2_+_148318770_148318841	0.0962275	SOX2.p2	AK314124|ACVR2A|92|activin A receptor, type IIA
hg18_v1_chr12_+_49185035_49185298	0.0962252	SOX2.p2	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg18_v1_chr6_+_116939500_116939528	0.0961508	SOX2.p2	BC032556|FAM26E|254228|family with sequence similarity 26, member E	NM_153711|FAM26E|254228|family with sequence similarity 26, member E	AK094140|FAM26E|254228|family with sequence similarity 26, member E	AK315572|FAM26E|254228|family with sequence similarity 26, member E
hg18_v1_chr9_+_2612099_2612126	0.09599	SOX2.p2	S73849|VLDLR|7436|very low density lipoprotein receptor	D16493|VLDLR|7436|very low density lipoprotein receptor	BC142653|VLDLR|7436|very low density lipoprotein receptor	CR620590|VLDLR|7436|very low density lipoprotein receptor
hg18_v1_chr11_+_33235743_33235980	0.0959745	SOX2.p2	NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3	NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3	Y09306|HIPK3|10114|homeodomain interacting protein kinase 3	AF305239|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr12_-_85756766_85756811	0.0957121	SOX2.p2	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)	NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg18_v1_chr8_-_110689396_110689408	0.0956878	SOX2.p2	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)
hg18_v1_chr3_-_46761248_46761248	0.0956413	SOX2.p2	BC133695|PRSS45|377047|protease, serine, 45	NM_199183|PRSS45|377047|protease, serine, 45
hg18_v1_chr7_-_111633428_111633575	0.09549	SOX2.p2	AY233380|DOCK4|9732|dedicator of cytokinesis 4	BC117688|DOCK4|9732|dedicator of cytokinesis 4	BC117689|DOCK4|9732|dedicator of cytokinesis 4	BC117694|DOCK4|9732|dedicator of cytokinesis 4
hg18_v1_chr12_-_9804682_9804763	0.095465	SOX2.p2	AY238518|CD69|969|CD69 molecule	DQ893175|CD69|969|CD69 molecule	DQ896474|CD69|969|CD69 molecule	L07555|CD69|969|CD69 molecule	AK291869|CD69|969|CD69 molecule	AK303174|CD69|969|CD69 molecule	AK303383|CD69|969|CD69 molecule	BC007037|CD69|969|CD69 molecule	NM_001781|CD69|969|CD69 molecule	Z22576|CD69|969|CD69 molecule
hg18_v1_chr2_-_128285214_128285238	0.095334	SOX2.p2	BC005401|WDR33|55339|WD repeat domain 33	NM_001006622|WDR33|55339|WD repeat domain 33	NM_001006623|WDR33|55339|WD repeat domain 33	NM_018383|WDR33|55339|WD repeat domain 33
hg18_v1_chr3_+_156280129_156280157	0.095236	SOX2.p2	AK310664|MME|4311|membrane metallo-endopeptidase	NM_000902|MME|4311|membrane metallo-endopeptidase	BX647134|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr1_-_233558114_233558115	0.095222	SOX2.p2	BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr1_+_50347176_50347181	0.0950996	SOX2.p2	NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr19_+_18357966_18357999	0.0949164	SOX2.p2	AB000584|GDF15|9518|growth differentiation factor 15	AK225431|GDF15|9518|growth differentiation factor 15	AK291530|GDF15|9518|growth differentiation factor 15	NM_004864|GDF15|9518|growth differentiation factor 15	BC008962|GDF15|9518|growth differentiation factor 15	U88323|GDF15|9518|growth differentiation factor 15	BC000529|GDF15|9518|growth differentiation factor 15	AF019770|GDF15|9518|growth differentiation factor 15	U51731|GDF15|9518|growth differentiation factor 15	BT019465|GDF15|9518|growth differentiation factor 15
hg18_v1_chr11_-_123030091_123030351	0.0948088	SOX2.p2	AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta	AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	CR609664|SCN3B|55800|sodium channel, voltage-gated, type III, beta
hg18_v1_chr1_-_233558117_233558154	0.0948041	SOX2.p2	AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr17_-_10313600_10313600	0.0946323	SOX2.p2	AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle	NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle
hg18_v1_chr14_-_44673408_44673417	0.0946244	SOX2.p2	BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa	DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa	CR613618|FKBP3|2287|FK506 binding protein 3, 25kDa	CR599673|FKBP3|2287|FK506 binding protein 3, 25kDa	CR623899|FKBP3|2287|FK506 binding protein 3, 25kDa	CR610696|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr9_+_2612134_2612188	0.0946167	SOX2.p2	AK092381|VLDLR|7436|very low density lipoprotein receptor	D16494|VLDLR|7436|very low density lipoprotein receptor
hg18_v1_chrX_+_41077594_41077594	0.0945957	SOX2.p2	AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr8_+_11697706_11697750	0.0945888	SOX2.p2	CR592418|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR613379|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06105|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC029641|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BC034440|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR602308|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR610548|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR626247|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	L06070|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	BT006704|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	CR457033|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ890697|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	DQ893882|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1
hg18_v1_chr11_+_20005704_20005712	0.094424	SOX2.p2	AK307574|NAV2|89797|neuron navigator 2
hg18_v1_chr14_-_44673418_44673495	0.0944033	SOX2.p2	CR590899|FKBP3|2287|FK506 binding protein 3, 25kDa	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa	BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa	AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa	M96256|FKBP3|2287|FK506 binding protein 3, 25kDa	NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa
hg18_v1_chr10_+_60607232_60607356	0.094279	SOX2.p2	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chr2_+_234624084_234624169	0.094158	SOX2.p2	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa	NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa	BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa	U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa
hg18_v1_chr11_-_102219450_102219563	0.094117	SOX2.p2	J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg18_v1_chr1_-_148507779_148508023	0.094097	SOX2.p2	CR601650|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594321|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR594282|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR596144|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626054|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626622|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR613868|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626391|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609960|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR626805|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR597912|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR610823|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR603099|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR591331|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR612872|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR605320|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609243|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR618014|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR607278|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	CR609659|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr10_+_11247467_11247530	0.0940054	SOX2.p2	AK295511|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr11_+_22646229_22646229	0.0938875	SOX2.p2	BC013326|GAS2|2620|growth arrest-specific 2	BC040470|GAS2|2620|growth arrest-specific 2	NM_177553|GAS2|2620|growth arrest-specific 2
hg18_v1_chr1_+_150937463_150937463	0.0938308	SOX2.p2	BC119707|LCE2A|353139|late cornified envelope 2A	BC127647|LCE2A|353139|late cornified envelope 2A	NM_178428|LCE2A|353139|late cornified envelope 2A
hg18_v1_chr1_+_66570363_66570520	0.0934969	SOX2.p2	NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr3_-_194579207_194579325	0.0934833	SOX2.p2	AY823163|ATP13A5|344905|ATPase type 13A5	NM_198505|ATP13A5|344905|ATPase type 13A5	AK122613|ATP13A5|344905|ATPase type 13A5
hg18_v1_chr1_-_233558071_233558110	0.0934367	SOX2.p2	BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)
hg18_v1_chr11_-_5232480_5232620	0.0933814	SOX2.p2	AF110493|HBG2|3048|hemoglobin, gamma G	X55656|HBG2|3048|hemoglobin, gamma G	DQ892665|HBG1|3047|hemoglobin, gamma A	DQ892801|HBG1|3047|hemoglobin, gamma A	DQ895909|HBG2|3048|hemoglobin, gamma G	DQ896048|HBG1|3047|hemoglobin, gamma A	M15386|HBG2|3048|hemoglobin, gamma G	CR596479|HBG1|3047|hemoglobin, gamma A	CR602897|HBG2|3048|hemoglobin, gamma G	CR599317|HBG2|3048|hemoglobin, gamma G	CR594576|HBG2|3048|hemoglobin, gamma G	CR593826|HBG2|3048|hemoglobin, gamma G	CR594720|HBG1|3047|hemoglobin, gamma A	CR603041|HBG2|3048|hemoglobin, gamma G	CR609411|HBG1|3047|hemoglobin, gamma A	CR613701|HBG2|3048|hemoglobin, gamma G	CR620360|HBG1|3047|hemoglobin, gamma A	CR593382|HBG1|3047|hemoglobin, gamma A	CR607395|HBG2|3048|hemoglobin, gamma G	CR608786|HBG1|3047|hemoglobin, gamma A	CR610392|HBG2|3048|hemoglobin, gamma G	CR615907|HBG2|3048|hemoglobin, gamma G	CR619879|HBG1|3047|hemoglobin, gamma A	CR626466|HBG1|3047|hemoglobin, gamma A	CR595029|HBG2|3048|hemoglobin, gamma G	CR604256|HBG1|3047|hemoglobin, gamma A	CR593022|HBG2|3048|hemoglobin, gamma G	CR593470|HBG2|3048|hemoglobin, gamma G	CR595535|HBG2|3048|hemoglobin, gamma G	CR602719|HBG2|3048|hemoglobin, gamma G	CR604223|HBG2|3048|hemoglobin, gamma G	CR609361|HBG2|3048|hemoglobin, gamma G	CR613883|HBG2|3048|hemoglobin, gamma G	CR614139|HBG1|3047|hemoglobin, gamma A	CR619706|HBG1|3047|hemoglobin, gamma A	CR619938|HBG1|3047|hemoglobin, gamma A	CR622267|HBG1|3047|hemoglobin, gamma A	CR625875|HBG1|3047|hemoglobin, gamma A	CR626236|HBG1|3047|hemoglobin, gamma A	CR626417|HBG1|3047|hemoglobin, gamma A	CR621032|HBG1|3047|hemoglobin, gamma A	CR593357|HBG2|3048|hemoglobin, gamma G	BC130457|HBG2|3048|hemoglobin, gamma G	BC130459|HBG2|3048|hemoglobin, gamma G	AK290492|HBG2|3048|hemoglobin, gamma G	BC010914|HBG1|3047|hemoglobin, gamma A	BC020719|HBG1|3047|hemoglobin, gamma A	NM_000184|HBG2|3048|hemoglobin, gamma G	BC029387|HBG2|3048|hemoglobin, gamma G	CR608640|HBG1|3047|hemoglobin, gamma A
hg18_v1_chr11_-_49960646_49960646	0.0933319	SOX2.p2	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12	NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12
hg18_v1_chr6_-_35804337_35804337	0.0933249	SOX2.p2	BC042605|FKBP5|2289|FK506 binding protein 5	NM_001145775|FKBP5|2289|FK506 binding protein 5
hg18_v1_chr1_-_239865724_239865854	0.0932836	SOX2.p2	BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)	NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)	X64728|CHML|1122|choroideremia-like (Rab escort protein 2)
hg18_v1_chr1_-_74971679_74971679	0.0932783	SOX2.p2	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)	NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)
hg18_v1_chr15_-_72281904_72281919	0.0932112	SOX2.p2	AK298921|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	BX537413|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr10_+_115514567_115514567	0.0932083	SOX2.p2	BC037870|C10orf81|79949|chromosome 10 open reading frame 81	FJ236306|C10orf81|79949|chromosome 10 open reading frame 81	NM_182601|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr9_-_3213007_3213066	0.0931855	SOX2.p2	
hg18_v1_chr21_+_37713076_37713076	0.093091	SOX2.p2	D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr12_+_48765300_48765461	0.0930177	SOX2.p2	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr11_+_20001130_20001211	0.0928419	SOX2.p2	NM_001111019|NAV2|89797|neuron navigator 2
hg18_v1_chr13_-_20533629_20533702	0.0927007	SOX2.p2	BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)
hg18_v1_chr20_+_29565898_29565921	0.0925091	SOX2.p2	NM_030789|HM13|81502|histocompatibility (minor) 13	NM_178580|HM13|81502|histocompatibility (minor) 13	NM_178581|HM13|81502|histocompatibility (minor) 13	NM_178582|HM13|81502|histocompatibility (minor) 13	AK314410|HM13|81502|histocompatibility (minor) 13	BC008938|HM13|81502|histocompatibility (minor) 13	BC008959|HM13|81502|histocompatibility (minor) 13	AY169310|HM13|81502|histocompatibility (minor) 13	AY169311|HM13|81502|histocompatibility (minor) 13	AY169312|HM13|81502|histocompatibility (minor) 13	AK075283|HM13|81502|histocompatibility (minor) 13	DQ168450|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr1_+_194887630_194887870	0.0924771	SOX2.p2	NM_000186|CFH|3075|complement factor H	NM_001014975|CFH|3075|complement factor H	AK291395|CFH|3075|complement factor H	AK225649|CFH|3075|complement factor H	CR616715|CFH|3075|complement factor H	X07523|CFH|3075|complement factor H	Y00716|CFH|3075|complement factor H	BC037285|CFH|3075|complement factor H	CR598844|CFH|3075|complement factor H	BC012610|CFH|3075|complement factor H	CR601432|CFH|3075|complement factor H	BC110643|CFH|3075|complement factor H	BC073982|CFH|3075|complement factor H	BC142699|CFH|3075|complement factor H
hg18_v1_chr1_-_180908639_180908689	0.0924144	SOX2.p2	BC069677|RGS8|85397|regulator of G-protein signaling 8	BC069718|RGS8|85397|regulator of G-protein signaling 8	BC103865|RGS8|85397|regulator of G-protein signaling 8	BC103866|RGS8|85397|regulator of G-protein signaling 8	BC103867|RGS8|85397|regulator of G-protein signaling 8	AF297015|RGS8|85397|regulator of G-protein signaling 8	NM_001102450|RGS8|85397|regulator of G-protein signaling 8	NM_033345|RGS8|85397|regulator of G-protein signaling 8
hg18_v1_chr3_+_43303005_43303141	0.0922691	SOX2.p2	AK291360|SNRK|54861|SNF related kinase	NM_001100594|SNRK|54861|SNF related kinase	NM_017719|SNRK|54861|SNF related kinase	BC071567|SNRK|54861|SNF related kinase	AK295187|SNRK|54861|SNF related kinase	CR749621|SNRK|54861|SNF related kinase	AK314376|SNRK|54861|SNF related kinase
hg18_v1_chr22_+_34107051_34107086	0.092094	SOX2.p2	CR456505|HMOX1|3162|heme oxygenase (decycling) 1	CR623301|HMOX1|3162|heme oxygenase (decycling) 1	NM_002133|HMOX1|3162|heme oxygenase (decycling) 1	CR603909|HMOX1|3162|heme oxygenase (decycling) 1	X06985|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr17_-_36915329_36915391	0.0920605	SOX2.p2	DQ890652|KRT13|3860|keratin 13	DQ893832|KRT13|3860|keratin 13	BC126184|KRT13|3860|keratin 13	BC136494|KRT13|3860|keratin 13	BC077718|KRT13|3860|keratin 13	X14640|KRT13|3860|keratin 13	CR591347|KRT13|3860|keratin 13	BC002661|KRT13|3860|keratin 13	X52426|KRT13|3860|keratin 13	AK223051|KRT13|3860|keratin 13	AK223077|KRT13|3860|keratin 13	AK290244|KRT13|3860|keratin 13	AK296806|KRT13|3860|keratin 13	AK092276|KRT13|3860|keratin 13	AK309752|KRT13|3860|keratin 13	NM_002274|KRT13|3860|keratin 13	NM_153490|KRT13|3860|keratin 13
hg18_v1_chr6_-_55848317_55848333	0.0920316	SOX2.p2	M60314|BMP5|653|bone morphogenetic protein 5	BC027958|BMP5|653|bone morphogenetic protein 5	NM_021073|BMP5|653|bone morphogenetic protein 5
hg18_v1_chr2_+_86800898_86800933	0.0916905	SOX2.p2	NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr10_-_5050191_5050206	0.0916089	SOX2.p2	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)	NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)
hg18_v1_chr2_+_211166323_211166337	0.0915993	SOX2.p2	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr3_-_153541468_153541468	0.0915584	SOX2.p2	AY358260|TMEM14E|645843|transmembrane protein 14E	NM_001123228|TMEM14E|645843|transmembrane protein 14E
hg18_v1_chr11_+_57285809_57286021	0.0915144	SOX2.p2	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1	NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1	AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1	BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1
hg18_v1_chr3_+_159310543_159310627	0.0914691	SOX2.p2	AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1	NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1	AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1	BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1
hg18_v1_chr15_-_62782470_62782502	0.0913505	SOX2.p2	CR624771|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr17_+_3324096_3324153	0.0913095	SOX2.p2	AK312901|ASPA|443|aspartoacylase	NM_001128085|ASPA|443|aspartoacylase
hg18_v1_chr12_+_27288344_27288438	0.0912295	SOX2.p2	NM_015000|STK38L|23012|serine/threonine kinase 38 like	BC028603|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr6_+_84626083_84626112	0.0911987	SOX2.p2	NM_016230|CYB5R4|51167|cytochrome b5 reductase 4
hg18_v1_chr7_-_16888121_16888137	0.0910631	SOX2.p2	AY359065|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)	BC058284|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)	NM_176813|AGR3|155465|anterior gradient homolog 3 (Xenopus laevis)
hg18_v1_chr11_-_5964790_5964790	0.0909565	SOX2.p2	BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1	NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1
hg18_v1_chr3_-_107070400_107070595	0.0909537	SOX2.p2	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b
hg18_v1_chr6_+_72982865_72982865	0.0909485	SOX2.p2	AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1	NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr3_+_110338250_110338256	0.0908992	SOX2.p2	AK026416|FLJ22763|401081|hypothetical LOC401081
hg18_v1_chr4_-_86106567_86106567	0.0906902	SOX2.p2	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3
hg18_v1_chr7_+_115637795_115637996	0.0905794	SOX2.p2	AK299104|TES|26136|testis derived transcript (3 LIM domains)	BC001451|TES|26136|testis derived transcript (3 LIM domains)	NM_015641|TES|26136|testis derived transcript (3 LIM domains)	AK021575|TES|26136|testis derived transcript (3 LIM domains)	AK300546|TES|26136|testis derived transcript (3 LIM domains)	AK309324|TES|26136|testis derived transcript (3 LIM domains)	AK222840|TES|26136|testis derived transcript (3 LIM domains)	AF245356|TES|26136|testis derived transcript (3 LIM domains)	AJ250865|TES|26136|testis derived transcript (3 LIM domains)	AK315644|TES|26136|testis derived transcript (3 LIM domains)	EU176352|TES|26136|testis derived transcript (3 LIM domains)	EU176694|TES|26136|testis derived transcript (3 LIM domains)
hg18_v1_chr4_+_53938666_53938766	0.0905679	SOX2.p2	BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr11_-_55684368_55684368	0.0904851	SOX2.p2	NM_001004058|OR8K5|219453|olfactory receptor, family 8, subfamily K, member 5
hg18_v1_chr17_-_31369046_31369117	0.0904751	SOX2.p2	U67128|CCL23|6368|chemokine (C-C motif) ligand 23	U85767|CCL23|6368|chemokine (C-C motif) ligand 23	BC093970|CCL23|6368|chemokine (C-C motif) ligand 23	BC143310|CCL23|6368|chemokine (C-C motif) ligand 23	NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23	NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23	U58913|CCL23|6368|chemokine (C-C motif) ligand 23
hg18_v1_chr4_-_54119123_54119147	0.0904441	SOX2.p2	AF237782|LNX1|84708|ligand of numb-protein X 1	AK294611|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr22_+_17012704_17012764	0.0901661	SOX2.p2	NM_017414|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr12_-_79855580_79855617	0.0899712	SOX2.p2	AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)
hg18_v1_chr7_+_56086960_56087060	0.089899	SOX2.p2	AK316230|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR590985|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AF385084|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK297751|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR605318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR612852|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK298371|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AK313819|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR600067|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626783|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR613031|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR626775|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AB209728|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	CR609340|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	AM295155|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)
hg18_v1_chr12_+_53901075_53901075	0.0897573	SOX2.p2	NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7
hg18_v1_chr2_+_11597530_11597579	0.0896534	SOX2.p2	AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr19_-_53239030_53239115	0.0895449	SOX2.p2	BC126133|CABP5|56344|calcium binding protein 5	BC126135|CABP5|56344|calcium binding protein 5	AF169159|CABP5|56344|calcium binding protein 5	NM_019855|CABP5|56344|calcium binding protein 5
hg18_v1_chr12_+_48765209_48765299	0.0895243	SOX2.p2	NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg18_v1_chr3_+_171183203_171183212	0.089481	SOX2.p2	CR596837|SEC62|7095|SEC62 homolog (S. cerevisiae)
hg18_v1_chr8_+_28407613_28407756	0.0893003	SOX2.p2	AK291480|FZD3|7976|frizzled homolog 3 (Drosophila)	AB039723|FZD3|7976|frizzled homolog 3 (Drosophila)	NM_017412|FZD3|7976|frizzled homolog 3 (Drosophila)
hg18_v1_chr12_-_43556338_43556406	0.0892906	SOX2.p2	AK056082|NELL2|4753|NEL-like 2 (chicken)	AK297521|NELL2|4753|NEL-like 2 (chicken)	AK309825|NELL2|4753|NEL-like 2 (chicken)	D83018|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr14_-_20179689_20179689	0.0891186	SOX2.p2	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1
hg18_v1_chr2_+_68548173_68548364	0.0890388	SOX2.p2	AK290841|APLF|200558|aprataxin and PNKP like factor	NM_173545|APLF|200558|aprataxin and PNKP like factor	AK308186|APLF|200558|aprataxin and PNKP like factor	BC041144|APLF|200558|aprataxin and PNKP like factor
hg18_v1_chr5_+_79651545_79651598	0.0889652	SOX2.p2	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1	AK098575|SPZ1|84654|spermatogenic leucine zipper 1	AK314007|SPZ1|84654|spermatogenic leucine zipper 1	AF333098|SPZ1|84654|spermatogenic leucine zipper 1	BC033798|SPZ1|84654|spermatogenic leucine zipper 1
hg18_v1_chr5_+_126140746_126140817	0.0889539	SOX2.p2	AK312603|LMNB1|4001|lamin B1	M34458|LMNB1|4001|lamin B1	CR609276|LMNB1|4001|lamin B1	BC012295|LMNB1|4001|lamin B1	BC078178|LMNB1|4001|lamin B1
hg18_v1_chr15_-_81667169_81667668	0.0887661	SOX2.p2	BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR598906|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	CR611705|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr7_-_33047042_33047046	0.0887642	SOX2.p2	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr3_-_87408301_87408426	0.0887631	SOX2.p2	L18781|POU1F1|5449|POU class 1 homeobox 1	X72215|POU1F1|5449|POU class 1 homeobox 1	X62429|POU1F1|5449|POU class 1 homeobox 1	D10216|POU1F1|5449|POU class 1 homeobox 1	NM_000306|POU1F1|5449|POU class 1 homeobox 1	NM_001122757|POU1F1|5449|POU class 1 homeobox 1
hg18_v1_chr6_-_29120930_29120995	0.0885963	SOX2.p2	BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1	NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1
hg18_v1_chr5_+_139008139_139008197	0.0884565	SOX2.p2	BC024040|CXXC5|51523|CXXC finger protein 5	BC041013|CXXC5|51523|CXXC finger protein 5	BC050046|CXXC5|51523|CXXC finger protein 5	BC017439|CXXC5|51523|CXXC finger protein 5
hg18_v1_chr5_-_171643399_171643442	0.088394	SOX2.p2	NM_152277|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chr8_-_93144039_93144111	0.0883514	SOX2.p2	
hg18_v1_chr8_+_103633023_103633052	0.0883048	SOX2.p2	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1	AK315276|ODF1|4956|outer dense fiber of sperm tails 1	BC104456|ODF1|4956|outer dense fiber of sperm tails 1	BC104457|ODF1|4956|outer dense fiber of sperm tails 1
hg18_v1_chr7_-_122627235_122627260	0.0882882	SOX2.p2	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1	NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1
hg18_v1_chr7_+_111633972_111634041	0.0882403	SOX2.p2	AL713791|ZNF277|11179|zinc finger protein 277	AK314630|ZNF277|11179|zinc finger protein 277	BC020626|ZNF277|11179|zinc finger protein 277	AK027128|ZNF277|11179|zinc finger protein 277	AF308819|ZNF277|11179|zinc finger protein 277
hg18_v1_chr14_+_90650109_90650208	0.0881524	SOX2.p2	NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159	NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159	NM_024952|C14orf159|80017|chromosome 14 open reading frame 159	AK097294|C14orf159|80017|chromosome 14 open reading frame 159	AK098752|C14orf159|80017|chromosome 14 open reading frame 159	BX537970|C14orf159|80017|chromosome 14 open reading frame 159	BX161393|C14orf159|80017|chromosome 14 open reading frame 159	BX247989|C14orf159|80017|chromosome 14 open reading frame 159	BC009182|C14orf159|80017|chromosome 14 open reading frame 159	AK308857|C14orf159|80017|chromosome 14 open reading frame 159	AB210031|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr12_+_97433541_97433544	0.0879224	SOX2.p2	AB209297|TMPO|7112|thymopoietin
hg18_v1_chr12_-_73889481_73889510	0.0878499	SOX2.p2	AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2	AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg18_v1_chr1_+_89871231_89871236	0.0874251	SOX2.p2	NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr8_+_1436938_1436975	0.0874026	SOX2.p2	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2	NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2
hg18_v1_chr1_+_100590595_100590615	0.087395	SOX2.p2	NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr2_+_87828718_87828750	0.0873567	SOX2.p2	BC022294|PLGLB2|5342|plasminogen-like B2	M93143|PLGLB2|5342|plasminogen-like B2	NM_002665|PLGLB2|5342|plasminogen-like B2	BC005379|PLGLB2|5342|plasminogen-like B2	NM_001032392|PLGLB1|5343|plasminogen-like B1	BC070296|PLGLB1|5343|plasminogen-like B1	BC109248|PLGLB1|5343|plasminogen-like B1	BC107767|PLGLB1|5343|plasminogen-like B1
hg18_v1_chr10_+_18589589_18589703	0.0873432	SOX2.p2	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr3_+_156280338_156280398	0.0872081	SOX2.p2	NM_007287|MME|4311|membrane metallo-endopeptidase
hg18_v1_chr10_-_108914277_108914455	0.0871844	SOX2.p2	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1
hg18_v1_chr4_+_24923490_24923601	0.0871583	SOX2.p2	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4	BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4	AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4
hg18_v1_chr1_+_87567136_87567158	0.0871553	SOX2.p2	AK292578|LMO4|8543|LIM domain only 4
hg18_v1_chr8_+_7332600_7332652	0.0870834	SOX2.p2	BC140937|DEFB105A|245908|defensin, beta 105A	AB089180|DEFB105A|245908|defensin, beta 105A	AF540977|DEFB105A|245908|defensin, beta 105A	BC128437|DEFB105A|245908|defensin, beta 105A	BC128438|DEFB105A|245908|defensin, beta 105A	NM_001040703|DEFB105B|504180|defensin, beta 105B	NM_152250|DEFB105A|245908|defensin, beta 105A
hg18_v1_chr7_+_5904858_5904955	0.0870721	SOX2.p2	BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	AK292326|C7orf28B|221960|chromosome 7 open reading frame 28B	CR595861|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)	BC010130|C7orf28B|221960|chromosome 7 open reading frame 28B	CR602854|C7orf28B|221960|chromosome 7 open reading frame 28B
hg18_v1_chr11_+_16716751_16716970	0.0870148	SOX2.p2	BC103747|C11orf58|10944|chromosome 11 open reading frame 58	AK315382|C11orf58|10944|chromosome 11 open reading frame 58	BC007103|C11orf58|10944|chromosome 11 open reading frame 58	BC016352|C11orf58|10944|chromosome 11 open reading frame 58	BC020937|C11orf58|10944|chromosome 11 open reading frame 58	CR602799|C11orf58|10944|chromosome 11 open reading frame 58	CR592723|C11orf58|10944|chromosome 11 open reading frame 58	CR614521|C11orf58|10944|chromosome 11 open reading frame 58	CR606236|C11orf58|10944|chromosome 11 open reading frame 58	CR602558|C11orf58|10944|chromosome 11 open reading frame 58	CR623569|C11orf58|10944|chromosome 11 open reading frame 58	CR600300|C11orf58|10944|chromosome 11 open reading frame 58	CR616149|C11orf58|10944|chromosome 11 open reading frame 58	CR614900|C11orf58|10944|chromosome 11 open reading frame 58	U51678|C11orf58|10944|chromosome 11 open reading frame 58	CR456882|C11orf58|10944|chromosome 11 open reading frame 58
hg18_v1_chr1_+_57093030_57093138	0.0868449	SOX2.p2	NM_000562|C8A|731|complement component 8, alpha polypeptide	AK309596|C8A|731|complement component 8, alpha polypeptide	BC020702|C8A|731|complement component 8, alpha polypeptide	BC132911|C8A|731|complement component 8, alpha polypeptide	BC132913|C8A|731|complement component 8, alpha polypeptide
hg18_v1_chr6_+_132000134_132000217	0.0867817	SOX2.p2	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg18_v1_chr16_+_28993770_28993843	0.0866864	SOX2.p2	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2
hg18_v1_chr17_-_36533903_36533944	0.0866811	SOX2.p2	DQ893629|KRTAP4-12|83755|keratin associated protein 4-12	EU176681|KRTAP4-12|83755|keratin associated protein 4-12	BC004180|KRTAP4-12|83755|keratin associated protein 4-12	BC004212|KRTAP4-12|83755|keratin associated protein 4-12	BC101159|KRTAP4-12|83755|keratin associated protein 4-12	BC101160|KRTAP4-12|83755|keratin associated protein 4-12	BC101161|KRTAP4-12|83755|keratin associated protein 4-12	BC101162|KRTAP4-12|83755|keratin associated protein 4-12	AJ406943|KRTAP4-12|83755|keratin associated protein 4-12	NM_031854|KRTAP4-12|83755|keratin associated protein 4-12
hg18_v1_chr4_-_152316105_152316153	0.0865887	SOX2.p2	BC108890|SH3D19|152503|SH3 domain containing 19	BC108891|SH3D19|152503|SH3 domain containing 19	BC108892|SH3D19|152503|SH3 domain containing 19	BC108893|SH3D19|152503|SH3 domain containing 19	NM_001128924|SH3D19|152503|SH3 domain containing 19
hg18_v1_chr9_+_2707525_2707525	0.0864859	SOX2.p2	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2	BC101353|KCNV2|169522|potassium channel, subfamily V, member 2	NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2
hg18_v1_chr1_+_246578699_246578699	0.086463	SOX2.p2	NM_001001918|OR14C36|127066|olfactory receptor, family 14, subfamily C, member 36
hg18_v1_chr14_+_64041170_64041223	0.0863615	SOX2.p2	AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr6_-_136889436_136889544	0.0862917	SOX2.p2	AK296483|MAP7|9053|microtubule-associated protein 7	AK311270|MAP7|9053|microtubule-associated protein 7	NM_001198614|MAP7|9053|microtubule-associated protein 7	NM_001198618|MAP7|9053|microtubule-associated protein 7	AK311114|MAP7|9053|microtubule-associated protein 7	AK311236|MAP7|9053|microtubule-associated protein 7	AK316062|MAP7|9053|microtubule-associated protein 7	NM_001198619|MAP7|9053|microtubule-associated protein 7	AK311234|MAP7|9053|microtubule-associated protein 7
hg18_v1_chr5_+_132433979_132434025	0.0862741	SOX2.p2	AK295847|HSPA4|3308|heat shock 70kDa protein 4	AK311471|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr17_+_44429748_44429911	0.0862192	SOX2.p2	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1	AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1
hg18_v1_chr12_+_74014685_74014774	0.0862011	SOX2.p2	AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1	EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1
hg18_v1_chr11_-_27637771_27637771	0.0861454	SOX2.p2	EF689009|BDNF|627|brain-derived neurotrophic factor	EF689010|BDNF|627|brain-derived neurotrophic factor	NM_001143816|BDNF|627|brain-derived neurotrophic factor	NM_170735|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr5_+_140541163_140541163	0.0860998	SOX2.p2	AB046841|PCDHB16|57717|protocadherin beta 16	NM_020957|PCDHB16|57717|protocadherin beta 16
hg18_v1_chr2_+_89849009_89849038	0.0860861	SOX2.p2	
hg18_v1_chr12_+_54172413_54172413	0.086079	SOX2.p2	NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68
hg18_v1_chr5_-_75044001_75044035	0.0859189	SOX2.p2	BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)	NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)
hg18_v1_chr11_-_5819702_5819702	0.0859128	SOX2.p2	NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6
hg18_v1_chr15_+_37330176_37330258	0.0857744	SOX2.p2	BX647708|C15orf54|400360|chromosome 15 open reading frame 54	NM_207445|C15orf54|400360|chromosome 15 open reading frame 54	AK096850|C15orf54|400360|chromosome 15 open reading frame 54	BC137300|C15orf54|400360|chromosome 15 open reading frame 54	BC137301|C15orf54|400360|chromosome 15 open reading frame 54	BC171789|C15orf54|400360|chromosome 15 open reading frame 54
hg18_v1_chr8_-_7710547_7710647	0.0857401	SOX2.p2	AF540979|DEFB107A|245910|defensin, beta 107A	AY122467|DEFB107A|245910|defensin, beta 107A	BC137510|DEFB107A|245910|defensin, beta 107A	BC137513|DEFB107A|245910|defensin, beta 107A	DQ119826|DEFB107A|245910|defensin, beta 107A	NM_001037668|DEFB107A|245910|defensin, beta 107A	NM_001040705|DEFB107B|503614|defensin, beta 107B
hg18_v1_chr1_+_67923331_67923550	0.0856419	SOX2.p2	CR612719|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR608507|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR613302|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR623510|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha	CR609553|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg18_v1_chr7_+_116907252_116907297	0.0855824	SOX2.p2	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg18_v1_chr13_-_101852028_101852124	0.0854885	SOX2.p2	BC100920|FGF14|2259|fibroblast growth factor 14	BC100921|FGF14|2259|fibroblast growth factor 14	BC100922|FGF14|2259|fibroblast growth factor 14	AY188178|FGF14|2259|fibroblast growth factor 14	NM_175929|FGF14|2259|fibroblast growth factor 14
hg18_v1_chr21_-_33065849_33066042	0.0853274	SOX2.p2	AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1	CR603496|GCFC1|94104|GC-rich sequence DNA-binding factor 1	AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1	BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1	NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1
hg18_v1_chr4_+_57468792_57468833	0.0853264	SOX2.p2	NM_005612|REST|5978|RE1-silencing transcription factor
hg18_v1_chr1_+_110683467_110683568	0.0847057	SOX2.p2	AF368062|RBM15|64783|RNA binding motif protein 15	AF368063|RBM15|64783|RNA binding motif protein 15	AF368064|RBM15|64783|RNA binding motif protein 15	NM_022768|RBM15|64783|RNA binding motif protein 15	BC098140|RBM15|64783|RNA binding motif protein 15	BC103493|RBM15|64783|RNA binding motif protein 15	BC103507|RBM15|64783|RNA binding motif protein 15	BC103660|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr1_+_149897334_149897386	0.0846554	SOX2.p2	BC107862|SNX27|81609|sorting nexin family member 27
hg18_v1_chr9_-_4142182_4142182	0.0846143	SOX2.p2	BC033899|GLIS3|169792|GLIS family zinc finger 3	NM_152629|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr6_-_131333173_131333315	0.084614	SOX2.p2	AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2
hg18_v1_chr6_+_135544170_135544207	0.0845887	SOX2.p2	BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr20_+_41976831_41976971	0.0844872	SOX2.p2	NM_001098797|TOX2|84969|TOX high mobility group box family member 2
hg18_v1_chr12_+_10973100_10973179	0.0843321	SOX2.p2	BX641094|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_005042|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC095488|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538206|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX538207|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647155|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648436|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648871|PRH2|5555|proline-rich protein HaeIII subfamily 2	NM_001110213|PRH2|5555|proline-rich protein HaeIII subfamily 2	CR749583|PRH2|5555|proline-rich protein HaeIII subfamily 2	K03202|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647156|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC141916|PRH2|5555|proline-rich protein HaeIII subfamily 2	BC136499|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648656|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX648901|PRH2|5555|proline-rich protein HaeIII subfamily 2	BX647085|PRH2|5555|proline-rich protein HaeIII subfamily 2
hg18_v1_chr11_-_114593838_114593879	0.0841131	SOX2.p2	AY309502|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr2_-_159021201_159021510	0.0840782	SOX2.p2	BC105928|CCDC148|130940|coiled-coil domain containing 148	BC107596|CCDC148|130940|coiled-coil domain containing 148	BC107597|CCDC148|130940|coiled-coil domain containing 148	AK123220|CCDC148|130940|coiled-coil domain containing 148	AK058105|CCDC148|130940|coiled-coil domain containing 148	AF458588|CCDC148|130940|coiled-coil domain containing 148	BC015395|CCDC148|130940|coiled-coil domain containing 148	AK309246|CCDC148|130940|coiled-coil domain containing 148	AK308783|CCDC148|130940|coiled-coil domain containing 148	AK311042|CCDC148|130940|coiled-coil domain containing 148	NM_001171637|CCDC148|130940|coiled-coil domain containing 148	NM_138803|CCDC148|130940|coiled-coil domain containing 148
hg18_v1_chr21_-_18113514_18113589	0.0840675	SOX2.p2	AF239726|C21orf91|54149|chromosome 21 open reading frame 91	AK023825|C21orf91|54149|chromosome 21 open reading frame 91	AK225123|C21orf91|54149|chromosome 21 open reading frame 91	AK314471|C21orf91|54149|chromosome 21 open reading frame 91	CR749496|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91	NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91	NM_017447|C21orf91|54149|chromosome 21 open reading frame 91
hg18_v1_chr1_+_89871212_89871230	0.0840008	SOX2.p2	BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C
hg18_v1_chr9_-_4289915_4290011	0.0839466	SOX2.p2	DQ438877|GLIS3|169792|GLIS family zinc finger 3	DQ438881|GLIS3|169792|GLIS family zinc finger 3	DQ438886|GLIS3|169792|GLIS family zinc finger 3	DQ438891|GLIS3|169792|GLIS family zinc finger 3	DQ438898|GLIS3|169792|GLIS family zinc finger 3	DQ438901|GLIS3|169792|GLIS family zinc finger 3
hg18_v1_chr15_-_72281833_72281878	0.0838332	SOX2.p2	AF352728|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AY359089|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr11_-_116605761_116605769	0.0837745	SOX2.p2	BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7
hg18_v1_chr13_-_59485299_59485343	0.0837474	SOX2.p2	BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)
hg18_v1_chr2_-_180319013_180319013	0.0835354	SOX2.p2	AK096822|ZNF385B|151126|zinc finger protein 385B	NM_001113397|ZNF385B|151126|zinc finger protein 385B
hg18_v1_chr7_-_66097838_66098033	0.0833956	SOX2.p2	CR597378|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR606624|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622210|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601377|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR610261|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR622442|SBDS|51119|Shwachman-Bodian-Diamond syndrome	BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR591576|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR604577|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR612387|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR601234|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR613995|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR596032|SBDS|51119|Shwachman-Bodian-Diamond syndrome	CR626007|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome	NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome	AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome
hg18_v1_chr2_+_74913289_74913289	0.0832079	SOX2.p2	AF086198|HK2|3099|hexokinase 2	NM_000189|HK2|3099|hexokinase 2
hg18_v1_chr10_+_91451313_91451398	0.0828942	SOX2.p2	AK290439|KIF20B|9585|kinesin family member 20B	NM_016195|KIF20B|9585|kinesin family member 20B	AY282406|KIF20B|9585|kinesin family member 20B	BC012585|KIF20B|9585|kinesin family member 20B	BC108688|KIF20B|9585|kinesin family member 20B	BC058913|KIF20B|9585|kinesin family member 20B	AL117496|KIF20B|9585|kinesin family member 20B	BC093089|KIF20B|9585|kinesin family member 20B	AB033337|KIF20B|9585|kinesin family member 20B	BC046134|KIF20B|9585|kinesin family member 20B	BC042130|KIF20B|9585|kinesin family member 20B	AK074336|KIF20B|9585|kinesin family member 20B
hg18_v1_chr14_+_90650720_90650840	0.082889	SOX2.p2	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159	BX248060|C14orf159|80017|chromosome 14 open reading frame 159	BC010614|C14orf159|80017|chromosome 14 open reading frame 159	AY358516|C14orf159|80017|chromosome 14 open reading frame 159
hg18_v1_chr2_+_99344060_99344285	0.0828804	SOX2.p2	AL133563|EIF5B|9669|eukaryotic translation initiation factor 5B	CR604527|EIF5B|9669|eukaryotic translation initiation factor 5B
hg18_v1_chr16_+_66433722_66433801	0.0828422	SOX2.p2	AK289367|THAP11|57215|THAP domain containing 11	BC012182|THAP11|57215|THAP domain containing 11
hg18_v1_chr10_+_105716925_105716984	0.0828183	SOX2.p2	BC047885|SLK|9748|STE20-like kinase	BC064804|SLK|9748|STE20-like kinase	BC047762|SLK|9748|STE20-like kinase	BC036736|SLK|9748|STE20-like kinase	D86959|SLK|9748|STE20-like kinase
hg18_v1_chr12_-_51001407_51001448	0.0827921	SOX2.p2	BC126935|KRT83|3889|keratin 83	BC128063|KRT83|3889|keratin 83	BC069546|KRT83|3889|keratin 83	X99141|KRT83|3889|keratin 83	AK314904|KRT83|3889|keratin 83	NM_002282|KRT83|3889|keratin 83
hg18_v1_chr6_+_35812836_35812836	0.0826894	SOX2.p2	AK058119|C6orf81|221481|chromosome 6 open reading frame 81	BC033033|C6orf81|221481|chromosome 6 open reading frame 81	NM_145028|C6orf81|221481|chromosome 6 open reading frame 81
hg18_v1_chr17_+_65582981_65583070	0.0826849	SOX2.p2	BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16
hg18_v1_chr16_+_6009095_6009357	0.0826039	SOX2.p2	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1
hg18_v1_chr1_-_241485105_241485285	0.0823814	SOX2.p2	AK310003|CEP170|9859|centrosomal protein 170kDa	BC050722|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr12_-_116983276_116983360	0.0823789	SOX2.p2	AK310892|WSB2|55884|WD repeat and SOCS box containing 2	BC015887|WSB2|55884|WD repeat and SOCS box containing 2	AK298513|WSB2|55884|WD repeat and SOCS box containing 2	AF229181|WSB2|55884|WD repeat and SOCS box containing 2	NM_018639|WSB2|55884|WD repeat and SOCS box containing 2
hg18_v1_chr12_+_20739555_20739982	0.0823778	SOX2.p2	NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	CR594946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1
hg18_v1_chr5_+_180348450_180348564	0.0823447	SOX2.p2	NM_197975|BTNL3|10917|butyrophilin-like 3	AK025267|BTNL3|10917|butyrophilin-like 3	AY358385|BTNL3|10917|butyrophilin-like 3	BC100800|BTNL3|10917|butyrophilin-like 3	BC100801|BTNL3|10917|butyrophilin-like 3	BC100802|BTNL3|10917|butyrophilin-like 3
hg18_v1_chr1_-_199742871_199743009	0.0823076	SOX2.p2	CR614180|CSRP1|1465|cysteine and glycine-rich protein 1	CR625797|CSRP1|1465|cysteine and glycine-rich protein 1	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1	AK122812|CSRP1|1465|cysteine and glycine-rich protein 1	AK302237|CSRP1|1465|cysteine and glycine-rich protein 1	AK304415|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1	NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr2_-_153282104_153282229	0.082196	SOX2.p2	U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg18_v1_chr6_+_112481970_112482251	0.082051	SOX2.p2	BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3	NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3	BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3	AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3	AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3	AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3
hg18_v1_chr2_+_188865634_188865755	0.0820482	SOX2.p2	NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1
hg18_v1_chr2_+_182558795_182558993	0.0820104	SOX2.p2	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg18_v1_chr7_-_116854765_116854812	0.0820073	SOX2.p2	AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1
hg18_v1_chr18_+_3584056_3584228	0.0819105	SOX2.p2	AK093095|FLJ35776|649446|hypothetical LOC649446	BC137437|FLJ35776|649446|hypothetical LOC649446
hg18_v1_chr11_-_6998041_6998161	0.0818709	SOX2.p2	BC136772|ZNF214|7761|zinc finger protein 214	BC144405|ZNF214|7761|zinc finger protein 214	AF056617|ZNF214|7761|zinc finger protein 214	AK313462|ZNF214|7761|zinc finger protein 214	NM_013249|ZNF214|7761|zinc finger protein 214
hg18_v1_chr2_+_79200995_79201094	0.0818282	SOX2.p2	AK307292|REG1A|5967|regenerating islet-derived 1 alpha	NM_002909|REG1A|5967|regenerating islet-derived 1 alpha
hg18_v1_chr15_-_41449399_41449551	0.0817971	SOX2.p2	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29	AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29	NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29	BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29
hg18_v1_chr6_+_52393763_52393763	0.0817284	SOX2.p2	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1	NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1
hg18_v1_chr2_+_119416214_119416380	0.0817267	SOX2.p2	BC016004|MARCO|8685|macrophage receptor with collagenous structure	NM_006770|MARCO|8685|macrophage receptor with collagenous structure	AK313139|MARCO|8685|macrophage receptor with collagenous structure	CR603381|MARCO|8685|macrophage receptor with collagenous structure	AK301407|MARCO|8685|macrophage receptor with collagenous structure	CR623903|MARCO|8685|macrophage receptor with collagenous structure	AF035819|MARCO|8685|macrophage receptor with collagenous structure	DQ892823|MARCO|8685|macrophage receptor with collagenous structure	DQ892833|MARCO|8685|macrophage receptor with collagenous structure	DQ896080|MARCO|8685|macrophage receptor with collagenous structure	AK297030|MARCO|8685|macrophage receptor with collagenous structure	CR590986|MARCO|8685|macrophage receptor with collagenous structure	CR595006|MARCO|8685|macrophage receptor with collagenous structure	CR614449|MARCO|8685|macrophage receptor with collagenous structure
hg18_v1_chr2_-_55130925_55130945	0.0816309	SOX2.p2	AF320999|RTN4|57142|reticulon 4	AJ251383|RTN4|57142|reticulon 4	AJ251384|RTN4|57142|reticulon 4	AM393104|RTN4|57142|reticulon 4	AM393557|RTN4|57142|reticulon 4	BC010737|RTN4|57142|reticulon 4
hg18_v1_chr3_+_184453907_184454037	0.0814238	SOX2.p2	AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chrX_-_39921525_39921525	0.0814004	SOX2.p2	BC114220|BCOR|54880|BCL6 corepressor	NM_001123383|BCOR|54880|BCL6 corepressor	NM_001123384|BCOR|54880|BCL6 corepressor
hg18_v1_chr4_+_1842947_1843045	0.0813941	SOX2.p2	BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1
hg18_v1_chr11_-_123816190_123816263	0.0813077	SOX2.p2	AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8	BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8
hg18_v1_chr15_-_74091817_74091839	0.0812882	SOX2.p2	CR749519|NRG4|145957|neuregulin 4	AK311507|NRG4|145957|neuregulin 4	BC017568|NRG4|145957|neuregulin 4	NM_138573|NRG4|145957|neuregulin 4
hg18_v1_chr2_-_204108151_204108632	0.0811761	SOX2.p2	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
hg18_v1_chr8_-_145132551_145132579	0.0811368	SOX2.p2	AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr22_+_17012841_17012964	0.0811288	SOX2.p2	AK313385|USP18|11274|ubiquitin specific peptidase 18	AL136690|USP18|11274|ubiquitin specific peptidase 18	BC014896|USP18|11274|ubiquitin specific peptidase 18
hg18_v1_chr6_-_133076873_133076889	0.080966	SOX2.p2	U39664|VNN1|8876|vanin 1	BC096268|VNN1|8876|vanin 1	AJ132099|VNN1|8876|vanin 1	BC096265|VNN1|8876|vanin 1	BC096266|VNN1|8876|vanin 1	BC096267|VNN1|8876|vanin 1	AK290425|VNN1|8876|vanin 1	AK314265|VNN1|8876|vanin 1	NM_004666|VNN1|8876|vanin 1
hg18_v1_chr6_-_66473790_66473838	0.0809206	SOX2.p2	FM209056|EYS|346007|eyes shut homolog (Drosophila)	BX647741|EYS|346007|eyes shut homolog (Drosophila)	BX537914|EYS|346007|eyes shut homolog (Drosophila)	FJ416331|EYS|346007|eyes shut homolog (Drosophila)	NM_001142800|EYS|346007|eyes shut homolog (Drosophila)	NM_001142801|EYS|346007|eyes shut homolog (Drosophila)
hg18_v1_chr12_+_53809731_53809819	0.0809169	SOX2.p2	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2	NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2
hg18_v1_chr2_-_169455167_169455208	0.0808159	SOX2.p2	AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	CR590224|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
hg18_v1_chr12_+_52960798_52960857	0.0806043	SOX2.p2	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2	CR618488|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622443|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590129|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590800|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593319|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR593400|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR596532|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597068|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598845|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598960|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600314|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601721|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR602906|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603477|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604435|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR604458|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR608892|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610851|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610890|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611042|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611985|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612776|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR614407|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR615846|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616053|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617360|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR617756|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR617885|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618573|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620105|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620193|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622067|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622713|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624282|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624664|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625195|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625490|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR625937|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626448|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626484|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626498|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR605048|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR610363|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR597174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598050|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR603757|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611088|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607943|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595283|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR600495|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR601024|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR607779|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR609019|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611182|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR613694|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616984|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618106|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618772|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619770|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620719|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR620988|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR622095|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626543|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR626585|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR591763|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR595244|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612285|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR612903|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR616623|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR618174|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624419|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590581|HNRNPA1P10|664709|heterogeneous nuclear ribonucleoprotein A1 pseudogene 10	CR605418|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR611606|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR619167|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR590877|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621589|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR624350|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR598479|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	CR621950|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1	U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1
hg18_v1_chr3_+_35696119_35696282	0.0804734	SOX2.p2	AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa
hg18_v1_chr16_+_23673448_23673592	0.0804578	SOX2.p2	AF146019|CHP2|63928|calcineurin B homologous protein 2	NM_022097|CHP2|63928|calcineurin B homologous protein 2	AK313062|CHP2|63928|calcineurin B homologous protein 2
hg18_v1_chr11_-_6633427_6633651	0.0804345	SOX2.p2	AB053446|DCHS1|8642|dachsous 1 (Drosophila)	NM_003737|DCHS1|8642|dachsous 1 (Drosophila)
hg18_v1_chr21_-_30908093_30908119	0.0804065	SOX2.p2	NM_181602|KRTAP6-1|337966|keratin associated protein 6-1	AB096954|KRTAP6-1|337966|keratin associated protein 6-1
hg18_v1_chr2_+_173129119_173129124	0.0803363	SOX2.p2	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg18_v1_chr1_+_110683586_110683622	0.0802606	SOX2.p2	AK022541|RBM15|64783|RNA binding motif protein 15	BC006397|RBM15|64783|RNA binding motif protein 15	BC062316|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr5_+_161207517_161207517	0.0801994	SOX2.p2	NM_001127644|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr1_-_177378801_177378846	0.0801878	SOX2.p2	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2
hg18_v1_chr11_-_83661878_83661970	0.0801804	SOX2.p2	AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)	AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chr7_+_91762227_91762355	0.0801601	SOX2.p2	
hg18_v1_chr20_-_29457650_29457729	0.0801061	SOX2.p2	AY501000|DEFB121|245934|defensin, beta 121	BC130607|DEFB121|245934|defensin, beta 121	BC130609|DEFB121|245934|defensin, beta 121	NM_001011878|DEFB121|245934|defensin, beta 121
hg18_v1_chr2_-_27399405_27399488	0.0800929	SOX2.p2	AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein	X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein	NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein
hg18_v1_chr10_-_63698463_63698627	0.0800703	SOX2.p2	AY150309|RTKN2|219790|rhotekin 2	BC025765|RTKN2|219790|rhotekin 2	NM_145307|RTKN2|219790|rhotekin 2	BC141821|RTKN2|219790|rhotekin 2	BC142725|RTKN2|219790|rhotekin 2
hg18_v1_chr3_+_180763440_180763575	0.0800676	SOX2.p2	AB061315|ACTL6A|86|actin-like 6A	AK223212|ACTL6A|86|actin-like 6A	AK021756|ACTL6A|86|actin-like 6A	CR621230|ACTL6A|86|actin-like 6A	AB015907|ACTL6A|86|actin-like 6A	BC001391|ACTL6A|86|actin-like 6A	EU832285|ACTL6A|86|actin-like 6A	EU832370|ACTL6A|86|actin-like 6A	CR533529|ACTL6A|86|actin-like 6A
hg18_v1_chr22_-_21814208_21814279	0.080058	SOX2.p2	BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1	AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1	NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1	AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1
hg18_v1_chr21_+_46094301_46094331	0.0800226	SOX2.p2	CR614371|PCBP3|54039|poly(rC) binding protein 3	AF176329|PCBP3|54039|poly(rC) binding protein 3	NM_001130141|PCBP3|54039|poly(rC) binding protein 3	NM_020528|PCBP3|54039|poly(rC) binding protein 3	BC012061|PCBP3|54039|poly(rC) binding protein 3	AK310672|PCBP3|54039|poly(rC) binding protein 3
hg18_v1_chr11_-_123130435_123130462	0.0799779	SOX2.p2	NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1
hg18_v1_chr10_+_52420936_52420957	0.0799423	SOX2.p2	AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I	NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I
hg18_v1_chr14_-_52689680_52689756	0.0799177	SOX2.p2	DQ315474|DDHD1|80821|DDHD domain containing 1	GU376468|DDHD1|80821|DDHD domain containing 1	BC030703|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr3_+_171112053_171112175	0.0798417	SOX2.p2	BX648991|SAMD7|344658|sterile alpha motif domain containing 7	BX648534|SAMD7|344658|sterile alpha motif domain containing 7	BX648989|SAMD7|344658|sterile alpha motif domain containing 7	BX537903|SAMD7|344658|sterile alpha motif domain containing 7	NM_182610|SAMD7|344658|sterile alpha motif domain containing 7
hg18_v1_chr1_-_114215768_114215897	0.0798145	SOX2.p2	AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)	NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
hg18_v1_chr5_-_180163495_180163541	0.0797601	SOX2.p2	NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg18_v1_chr11_-_113082233_113082304	0.0797314	SOX2.p2	AK295366|TMPRSS5|80975|transmembrane protease, serine 5	BC047222|TMPRSS5|80975|transmembrane protease, serine 5	AK294313|TMPRSS5|80975|transmembrane protease, serine 5	BC028065|TMPRSS5|80975|transmembrane protease, serine 5	BC121802|TMPRSS5|80975|transmembrane protease, serine 5	BC121803|TMPRSS5|80975|transmembrane protease, serine 5	NM_030770|TMPRSS5|80975|transmembrane protease, serine 5	AB028140|TMPRSS5|80975|transmembrane protease, serine 5
hg18_v1_chr8_+_17824790_17824816	0.0796509	SOX2.p2	BC065022|PCM1|5108|pericentriolar material 1	BC027477|PCM1|5108|pericentriolar material 1	BC140946|PCM1|5108|pericentriolar material 1
hg18_v1_chr20_+_30259359_30259359	0.0796419	SOX2.p2	D80002|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr6_-_27988152_27988152	0.0796253	SOX2.p2	BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2	NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2
hg18_v1_chr8_+_31616809_31616809	0.0796015	SOX2.p2	NM_013962|NRG1|3084|neuregulin 1
hg18_v1_chr3_+_213430_213469	0.0794902	SOX2.p2	AB209329|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)
hg18_v1_chr1_-_26105477_26105579	0.0794549	SOX2.p2	BC082228|STMN1|3925|stathmin 1	AB209282|STMN1|3925|stathmin 1	X53305|STMN1|3925|stathmin 1	BX647885|STMN1|3925|stathmin 1	Z11566|STMN1|3925|stathmin 1	AK303692|STMN1|3925|stathmin 1	AK054594|STMN1|3925|stathmin 1	AK311801|STMN1|3925|stathmin 1	D28428|STMN1|3925|stathmin 1	J04991|STMN1|3925|stathmin 1	CR622594|STMN1|3925|stathmin 1	BC014353|STMN1|3925|stathmin 1	NM_001145454|STMN1|3925|stathmin 1	NM_005563|STMN1|3925|stathmin 1
hg18_v1_chr1_+_224317062_224317110	0.079442	SOX2.p2	CR595231|LOC440926|440926|H3 histone, family 3A pseudogene	CR611775|LOC440926|440926|H3 histone, family 3A pseudogene	CR616667|LOC440926|440926|H3 histone, family 3A pseudogene	CR594323|LOC440926|440926|H3 histone, family 3A pseudogene	CR594694|H3F3A|3020|H3 histone, family 3A	CR604105|LOC440926|440926|H3 histone, family 3A pseudogene	CR613651|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chr15_-_74941339_74941339	0.079422	SOX2.p2	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER	NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER
hg18_v1_chr4_+_71298187_71298281	0.0792008	SOX2.p2	NM_021225|PROL1|58503|proline rich, lacrimal 1	BC092438|PROL1|58503|proline rich, lacrimal 1	S83198|PROL1|58503|proline rich, lacrimal 1
hg18_v1_chr9_-_28709302_28709302	0.0791637	SOX2.p2	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2	NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2
hg18_v1_chr7_+_50314801_50314998	0.0790208	SOX2.p2	BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)
hg18_v1_chr6_-_32271868_32271902	0.0789604	SOX2.p2	BC033869|NOTCH4|4855|notch 4
hg18_v1_chr6_-_31740466_31740533	0.0789582	SOX2.p2	AF087962|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chr15_-_43458247_43458271	0.0788836	SOX2.p2	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr6_-_133008834_133008858	0.0788412	SOX2.p2	AY180374|TAAR1|134864|trace amine associated receptor 1	NM_138327|TAAR1|134864|trace amine associated receptor 1	BC101825|TAAR1|134864|trace amine associated receptor 1	BC112194|TAAR1|134864|trace amine associated receptor 1
hg18_v1_chr12_-_38123027_38123505	0.0788295	SOX2.p2	AB051495|KIF21A|55605|kinesin family member 21A	AM177179|KIF21A|55605|kinesin family member 21A	AY368076|KIF21A|55605|kinesin family member 21A	BC136414|KIF21A|55605|kinesin family member 21A	CR624607|KIF21A|55605|kinesin family member 21A	CR624190|KIF21A|55605|kinesin family member 21A	BC041430|KIF21A|55605|kinesin family member 21A	AF155117|KIF21A|55605|kinesin family member 21A	AF450487|KIF21A|55605|kinesin family member 21A	AK000059|KIF21A|55605|kinesin family member 21A	AB290166|KIF21A|55605|kinesin family member 21A	NM_001173463|KIF21A|55605|kinesin family member 21A	NM_001173464|KIF21A|55605|kinesin family member 21A	NM_001173465|KIF21A|55605|kinesin family member 21A	NM_017641|KIF21A|55605|kinesin family member 21A
hg18_v1_chr14_-_59167284_59167289	0.0787971	SOX2.p2	AK290534|RTN1|6252|reticulon 1
hg18_v1_chr11_-_10630408_10630498	0.0786419	SOX2.p2	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog	NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog	AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr12_-_16652202_16652290	0.0786158	SOX2.p2	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)
hg18_v1_chr14_+_20222175_20222211	0.0786096	SOX2.p2	FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5	NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5	AK092422|RNASE4|6038|ribonuclease, RNase A family, 4	NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr7_+_136849104_136849182	0.0783705	SOX2.p2	S64030|RPL41P5|6172|ribosomal protein L41 pseudogene 5
hg18_v1_chr1_+_172683834_172683872	0.0783034	SOX2.p2	BC095532|GPR52|9293|G protein-coupled receptor 52	NM_005684|GPR52|9293|G protein-coupled receptor 52	BC067456|GPR52|9293|G protein-coupled receptor 52	BC067457|GPR52|9293|G protein-coupled receptor 52	BC067458|GPR52|9293|G protein-coupled receptor 52	BC067459|GPR52|9293|G protein-coupled receptor 52	BC067460|GPR52|9293|G protein-coupled receptor 52	BC069460|GPR52|9293|G protein-coupled receptor 52
hg18_v1_chr3_+_138159396_138159645	0.0782866	SOX2.p2	AY358305|IL20RB|53833|interleukin 20 receptor beta	NM_144717|IL20RB|53833|interleukin 20 receptor beta	AK316084|IL20RB|53833|interleukin 20 receptor beta	AK296832|IL20RB|53833|interleukin 20 receptor beta	BC063696|IL20RB|53833|interleukin 20 receptor beta	CR590848|IL20RB|53833|interleukin 20 receptor beta	CR604488|IL20RB|53833|interleukin 20 receptor beta	BC033292|IL20RB|53833|interleukin 20 receptor beta
hg18_v1_chr2_-_55131157_55131175	0.0781956	SOX2.p2	AK075039|RTN4|57142|reticulon 4
hg18_v1_chr5_-_142057692_142057818	0.0781538	SOX2.p2	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)	AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)	DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)	NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)
hg18_v1_chr3_+_123996560_123996653	0.0780992	SOX2.p2	NM_032839|DIRC2|84925|disrupted in renal carcinoma 2	AK027690|DIRC2|84925|disrupted in renal carcinoma 2	AK291176|DIRC2|84925|disrupted in renal carcinoma 2	BC039821|DIRC2|84925|disrupted in renal carcinoma 2	BC033738|DIRC2|84925|disrupted in renal carcinoma 2
hg18_v1_chr2_+_198089036_198089082	0.0780595	SOX2.p2	AF093825|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF151853|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK307497|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AL080070|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AB015441|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AK297514|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AJ580638|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	CR457371|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr5_-_111121150_111121364	0.0780569	SOX2.p2	NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13	CR611883|C5orf13|9315|chromosome 5 open reading frame 13	CR597011|C5orf13|9315|chromosome 5 open reading frame 13	BC011050|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13	CR607755|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr6_-_166960690_166960726	0.0780561	SOX2.p2	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr2_-_210876560_210876597	0.0778403	SOX2.p2	X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	CR598137|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr2_-_55131124_55131138	0.077833	SOX2.p2	BC026788|RTN4|57142|reticulon 4
hg18_v1_chr1_-_199742841_199742863	0.0778034	SOX2.p2	CR619913|CSRP1|1465|cysteine and glycine-rich protein 1	BC007492|CSRP1|1465|cysteine and glycine-rich protein 1	CR593715|CSRP1|1465|cysteine and glycine-rich protein 1	CR603852|CSRP1|1465|cysteine and glycine-rich protein 1	CR613321|CSRP1|1465|cysteine and glycine-rich protein 1	CR601068|CSRP1|1465|cysteine and glycine-rich protein 1	CR615193|CSRP1|1465|cysteine and glycine-rich protein 1	CR621634|CSRP1|1465|cysteine and glycine-rich protein 1	CR625414|CSRP1|1465|cysteine and glycine-rich protein 1	M33146|CSRP1|1465|cysteine and glycine-rich protein 1	CR593927|CSRP1|1465|cysteine and glycine-rich protein 1	CR606741|CSRP1|1465|cysteine and glycine-rich protein 1	BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	CR595754|CSRP1|1465|cysteine and glycine-rich protein 1	CR610287|CSRP1|1465|cysteine and glycine-rich protein 1	CR623326|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr3_-_155630197_155630197	0.077767	SOX2.p2	DQ318360|GPR149|344758|G protein-coupled receptor 149	NM_001038705|GPR149|344758|G protein-coupled receptor 149
hg18_v1_chr20_-_30259007_30259266	0.0777488	SOX2.p2	AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2	D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2	AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2	BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2	NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2
hg18_v1_chr14_+_64040979_64041044	0.0777399	SOX2.p2	BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1	NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr14_-_21108714_21108714	0.0776532	SOX2.p2	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3
hg18_v1_chr20_+_19985289_19985351	0.0776447	SOX2.p2	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26	AL117439|C20orf26|26074|chromosome 20 open reading frame 26
hg18_v1_chr3_+_99288706_99288706	0.0776052	SOX2.p2	NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2
hg18_v1_chr8_+_75899326_75899326	0.0774828	SOX2.p2	CR749657|PI15|51050|peptidase inhibitor 15	NM_015886|PI15|51050|peptidase inhibitor 15
hg18_v1_chr11_-_5247948_5247948	0.0772617	SOX2.p2	NM_005330|HBE1|3046|hemoglobin, epsilon 1
hg18_v1_chr11_-_62753574_62753699	0.0772065	SOX2.p2	AK127610|SLC22A25|387601|solute carrier family 22, member 25	BC101315|SLC22A25|387601|solute carrier family 22, member 25	BC101314|SLC22A25|387601|solute carrier family 22, member 25	AY437532|SLC22A25|387601|solute carrier family 22, member 25	BC101316|SLC22A25|387601|solute carrier family 22, member 25	BC101317|SLC22A25|387601|solute carrier family 22, member 25	NM_199352|SLC22A25|387601|solute carrier family 22, member 25
hg18_v1_chr1_+_74473672_74473693	0.0771887	SOX2.p2	AF116826|TNNI3K|51086|TNNI3 interacting kinase	NM_015978|TNNI3K|51086|TNNI3 interacting kinase	AK307984|TNNI3K|51086|TNNI3 interacting kinase	BC113539|TNNI3K|51086|TNNI3 interacting kinase	BC117262|TNNI3K|51086|TNNI3 interacting kinase	AY303691|TNNI3K|51086|TNNI3 interacting kinase
hg18_v1_chr5_+_110455961_110456028	0.0771787	SOX2.p2	CR600030|WDR36|134430|WD repeat domain 36
hg18_v1_chr8_+_61592105_61592132	0.0770965	SOX2.p2	NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	X12953|RAB2A|5862|RAB2A, member RAS oncogene family	BC008929|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr3_-_124822113_124822219	0.0770454	SOX2.p2	NM_053031|MYLK|4638|myosin light chain kinase	NM_053032|MYLK|4638|myosin light chain kinase
hg18_v1_chr1_-_43410556_43410827	0.0770331	SOX2.p2	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2	AK295006|EBNA1BP2|10969|EBNA1 binding protein 2	NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2	NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2
hg18_v1_chr4_-_158111504_158111830	0.0770083	SOX2.p2	BC051876|PDGFC|56034|platelet derived growth factor C	BC094746|PDGFC|56034|platelet derived growth factor C	AF260738|PDGFC|56034|platelet derived growth factor C	AK300480|PDGFC|56034|platelet derived growth factor C	AF244813|PDGFC|56034|platelet derived growth factor C	AK313817|PDGFC|56034|platelet derived growth factor C	BC041783|PDGFC|56034|platelet derived growth factor C	AM922296|PDGFC|56034|platelet derived growth factor C	AB033831|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr2_-_128285136_128285211	0.0769535	SOX2.p2	BC108671|WDR33|55339|WD repeat domain 33	AB044749|WDR33|55339|WD repeat domain 33	AK002156|WDR33|55339|WD repeat domain 33	BC013990|WDR33|55339|WD repeat domain 33	BC068484|WDR33|55339|WD repeat domain 33	CR591938|WDR33|55339|WD repeat domain 33	AK223319|WDR33|55339|WD repeat domain 33
hg18_v1_chr3_+_130014957_130015132	0.0769036	SOX2.p2	CR619444|RAB7A|7879|RAB7A, member RAS oncogene family
hg18_v1_chr16_+_66433882_66434085	0.0768987	SOX2.p2	L10378|THAP11|57215|THAP domain containing 11	L10379|THAP11|57215|THAP domain containing 11	DQ892600|THAP11|57215|THAP domain containing 11	DQ895831|THAP11|57215|THAP domain containing 11	EF036502|THAP11|57215|THAP domain containing 11
hg18_v1_chr11_+_5862076_5862098	0.0767027	SOX2.p2	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4	NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4
hg18_v1_chr18_+_54681657_54682014	0.0766664	SOX2.p2	AB046849|ZNF532|55205|zinc finger protein 532
hg18_v1_chr2_+_108571177_108571199	0.0766467	SOX2.p2	NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1	U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chrX_+_133334965_133335121	0.0766416	SOX2.p2	AY157622|PHF6|84295|PHD finger protein 6	NM_001015877|PHF6|84295|PHD finger protein 6	NM_032335|PHF6|84295|PHD finger protein 6	NM_032458|PHF6|84295|PHD finger protein 6	AL832725|PHF6|84295|PHD finger protein 6	AK290095|PHF6|84295|PHD finger protein 6	AK303369|PHF6|84295|PHD finger protein 6	BC005994|PHF6|84295|PHD finger protein 6	AB058726|PHF6|84295|PHD finger protein 6
hg18_v1_chr5_+_133735004_133735187	0.076569	SOX2.p2	CR604876|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR616089|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR625304|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)	CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B (RAD6 homolog)
hg18_v1_chr3_+_180763380_180763427	0.0764664	SOX2.p2	AB060168|ACTL6A|86|actin-like 6A	NM_004301|ACTL6A|86|actin-like 6A	NM_177989|ACTL6A|86|actin-like 6A	NM_178042|ACTL6A|86|actin-like 6A	AK098691|ACTL6A|86|actin-like 6A	CR602120|ACTL6A|86|actin-like 6A	BC000949|ACTL6A|86|actin-like 6A	CR597700|ACTL6A|86|actin-like 6A	CR613774|ACTL6A|86|actin-like 6A	AL136608|ACTL6A|86|actin-like 6A	BC036371|ACTL6A|86|actin-like 6A
hg18_v1_chr14_+_38772870_38773069	0.0764547	SOX2.p2	AK314069|MIA2|117153|melanoma inhibitory activity 2	BX648228|MIA2|117153|melanoma inhibitory activity 2	NM_054024|MIA2|117153|melanoma inhibitory activity 2	BC035981|MIA2|117153|melanoma inhibitory activity 2	BC130537|MIA2|117153|melanoma inhibitory activity 2	BC130563|MIA2|117153|melanoma inhibitory activity 2	AM393252|MIA2|117153|melanoma inhibitory activity 2	AM393582|MIA2|117153|melanoma inhibitory activity 2	AF390175|MIA2|117153|melanoma inhibitory activity 2
hg18_v1_chr1_-_156937065_156937109	0.0763281	SOX2.p2	NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2	BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2
hg18_v1_chr3_+_184453547_184453738	0.0763095	SOX2.p2	NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr2_+_172530120_172530246	0.0762624	SOX2.p2	CR592532|HAT1|8520|histone acetyltransferase 1	BC018682|HAT1|8520|histone acetyltransferase 1
hg18_v1_chr1_-_180626804_180626884	0.0758888	SOX2.p2	BC031964|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr22_+_34107087_34107166	0.0758581	SOX2.p2	AK313120|HMOX1|3162|heme oxygenase (decycling) 1	CR611539|HMOX1|3162|heme oxygenase (decycling) 1	CR612068|HMOX1|3162|heme oxygenase (decycling) 1	BC001491|HMOX1|3162|heme oxygenase (decycling) 1	CR617367|HMOX1|3162|heme oxygenase (decycling) 1	CR590034|HMOX1|3162|heme oxygenase (decycling) 1	CR595835|HMOX1|3162|heme oxygenase (decycling) 1	CR598003|HMOX1|3162|heme oxygenase (decycling) 1	CR600636|HMOX1|3162|heme oxygenase (decycling) 1	CR601640|HMOX1|3162|heme oxygenase (decycling) 1	CR605543|HMOX1|3162|heme oxygenase (decycling) 1	CR611293|HMOX1|3162|heme oxygenase (decycling) 1	CR612044|HMOX1|3162|heme oxygenase (decycling) 1	CR615878|HMOX1|3162|heme oxygenase (decycling) 1	CR615893|HMOX1|3162|heme oxygenase (decycling) 1	CR617513|HMOX1|3162|heme oxygenase (decycling) 1	CR622130|HMOX1|3162|heme oxygenase (decycling) 1	CR623799|HMOX1|3162|heme oxygenase (decycling) 1	CR625550|HMOX1|3162|heme oxygenase (decycling) 1	CR626132|HMOX1|3162|heme oxygenase (decycling) 1	CR592402|HMOX1|3162|heme oxygenase (decycling) 1	CR596243|HMOX1|3162|heme oxygenase (decycling) 1	CR615425|HMOX1|3162|heme oxygenase (decycling) 1	CR615434|HMOX1|3162|heme oxygenase (decycling) 1	CR623238|HMOX1|3162|heme oxygenase (decycling) 1	CR594865|HMOX1|3162|heme oxygenase (decycling) 1	CR624289|HMOX1|3162|heme oxygenase (decycling) 1	CR615696|HMOX1|3162|heme oxygenase (decycling) 1	M23041|HMOX1|3162|heme oxygenase (decycling) 1	BT019785|HMOX1|3162|heme oxygenase (decycling) 1	CR541945|HMOX1|3162|heme oxygenase (decycling) 1	CR541968|HMOX1|3162|heme oxygenase (decycling) 1	CU013103|HMOX1|3162|heme oxygenase (decycling) 1	CU013391|HMOX1|3162|heme oxygenase (decycling) 1	DQ892310|HMOX1|3162|heme oxygenase (decycling) 1	DQ895510|HMOX1|3162|heme oxygenase (decycling) 1
hg18_v1_chr3_-_121117647_121117670	0.0758192	SOX2.p2	CR615239|GSK3B|2932|glycogen synthase kinase 3 beta
hg18_v1_chr6_+_144227265_144227265	0.0756628	SOX2.p2	BC146950|C6orf94|153918|chromosome 6 open reading frame 94	BC146969|C6orf94|153918|chromosome 6 open reading frame 94	BC171862|C6orf94|153918|chromosome 6 open reading frame 94	NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94
hg18_v1_chr1_-_23730298_23730299	0.0756544	SOX2.p2	L22846|E2F2|1870|E2F transcription factor 2	NM_004091|E2F2|1870|E2F transcription factor 2
hg18_v1_chr2_+_218972721_218972847	0.0756248	SOX2.p2	AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
hg18_v1_chr2_-_55130963_55131090	0.0755967	SOX2.p2	AK130812|RTN4|57142|reticulon 4	AB015639|RTN4|57142|reticulon 4	BC071848|RTN4|57142|reticulon 4	AB020693|RTN4|57142|reticulon 4	BC152425|RTN4|57142|reticulon 4	AF148537|RTN4|57142|reticulon 4	AF148538|RTN4|57142|reticulon 4	AK098385|RTN4|57142|reticulon 4	BC012619|RTN4|57142|reticulon 4
hg18_v1_chr9_+_124551839_124551947	0.0755463	SOX2.p2	NM_001004453|OR1L6|392390|olfactory receptor, family 1, subfamily L, member 6
hg18_v1_chr11_-_84312085_84312112	0.0753336	SOX2.p2	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)	AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)	AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)	NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)
hg18_v1_chrX_+_105932536_105932739	0.0752569	SOX2.p2	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)
hg18_v1_chr1_+_86942810_86942868	0.0752465	SOX2.p2	NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr5_+_61910318_61910473	0.0751467	SOX2.p2	AK123022|LRRC70|100130733|leucine rich repeat containing 70	NM_181506|LRRC70|100130733|leucine rich repeat containing 70	AY358733|LRRC70|100130733|leucine rich repeat containing 70	BC110838|LRRC70|100130733|leucine rich repeat containing 70	AY280614|LRRC70|100130733|leucine rich repeat containing 70
hg18_v1_chr2_-_55131176_55131197	0.0749705	SOX2.p2	AB040462|RTN4|57142|reticulon 4	AB040463|RTN4|57142|reticulon 4	AY102277|RTN4|57142|reticulon 4	AY102278|RTN4|57142|reticulon 4	AY102279|RTN4|57142|reticulon 4	BC016165|RTN4|57142|reticulon 4	BC068991|RTN4|57142|reticulon 4	BC150182|RTN4|57142|reticulon 4	BC152555|RTN4|57142|reticulon 4
hg18_v1_chr12_-_121551349_121551411	0.0748643	SOX2.p2	BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr5_+_31229549_31229589	0.074796	SOX2.p2	AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr7_+_80105718_80105767	0.0747443	SOX2.p2	NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)	NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr1_-_115070413_115070531	0.0746436	SOX2.p2	BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding	CR594529|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr6_-_53121540_53121585	0.0745292	SOX2.p2	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)	BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)	AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)	NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)	D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)
hg18_v1_chr11_-_123353607_123353697	0.0744068	SOX2.p2	NM_001004474|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1	BC137037|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1	BC137038|OR10S1|219873|olfactory receptor, family 10, subfamily S, member 1
hg18_v1_chr8_-_60194099_60194353	0.0742858	SOX2.p2	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box	DQ894852|TOX|9760|thymocyte selection-associated high mobility group box	AK000971|TOX|9760|thymocyte selection-associated high mobility group box	BC016665|TOX|9760|thymocyte selection-associated high mobility group box	AK302331|TOX|9760|thymocyte selection-associated high mobility group box	AB018351|TOX|9760|thymocyte selection-associated high mobility group box	NM_014729|TOX|9760|thymocyte selection-associated high mobility group box
hg18_v1_chr15_-_32289480_32289554	0.074209	SOX2.p2	BC026234|C15orf29|79768|chromosome 15 open reading frame 29	AL136908|C15orf29|79768|chromosome 15 open reading frame 29	AK293021|C15orf29|79768|chromosome 15 open reading frame 29	BC111000|C15orf29|79768|chromosome 15 open reading frame 29	AK297904|C15orf29|79768|chromosome 15 open reading frame 29	CR596194|C15orf29|79768|chromosome 15 open reading frame 29
hg18_v1_chr14_-_68689623_68689713	0.0740859	SOX2.p2	NM_003861|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr7_-_80386258_80386482	0.0739387	SOX2.p2	AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg18_v1_chr17_-_44847215_44847279	0.0739314	SOX2.p2	S85655|PHB|5245|prohibitin	CR599787|PHB|5245|prohibitin	CR618484|PHB|5245|prohibitin	CR617750|PHB|5245|prohibitin	BC013401|PHB|5245|prohibitin	CR599633|PHB|5245|prohibitin	CR601626|PHB|5245|prohibitin	CR621290|PHB|5245|prohibitin	CR591049|PHB|5245|prohibitin	CR619581|PHB|5245|prohibitin	CR619685|PHB|5245|prohibitin	CR626185|PHB|5245|prohibitin	AK307767|PHB|5245|prohibitin	AK223181|PHB|5245|prohibitin	AK290766|PHB|5245|prohibitin	AK302258|PHB|5245|prohibitin	AK312649|PHB|5245|prohibitin	NM_002634|PHB|5245|prohibitin
hg18_v1_chr6_-_33862690_33862696	0.0739185	SOX2.p2	AK301083|LEMD2|221496|LEM domain containing 2	NM_001143944|LEMD2|221496|LEM domain containing 2
hg18_v1_chr14_-_19553191_19553191	0.0737913	SOX2.p2	NM_001004712|OR4K14|122740|olfactory receptor, family 4, subfamily K, member 14
hg18_v1_chr2_-_128332161_128332174	0.0736355	SOX2.p2	U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr16_-_70474912_70474944	0.073621	SOX2.p2	AF070588|ZNF821|55565|zinc finger protein 821	NM_017530|ZNF821|55565|zinc finger protein 821	AK296603|ZNF821|55565|zinc finger protein 821
hg18_v1_chr1_+_161305558_161305898	0.0734336	SOX2.p2	DQ346663|RGS4|5999|regulator of G-protein signaling 4	NM_001113381|RGS4|5999|regulator of G-protein signaling 4	AK093959|RGS4|5999|regulator of G-protein signaling 4	AK300832|RGS4|5999|regulator of G-protein signaling 4	DQ346662|RGS4|5999|regulator of G-protein signaling 4	AK312250|RGS4|5999|regulator of G-protein signaling 4	AK096204|RGS4|5999|regulator of G-protein signaling 4	BC051869|RGS4|5999|regulator of G-protein signaling 4	U27768|RGS4|5999|regulator of G-protein signaling 4	BC000737|RGS4|5999|regulator of G-protein signaling 4	AF493928|RGS4|5999|regulator of G-protein signaling 4	BT007025|RGS4|5999|regulator of G-protein signaling 4
hg18_v1_chr2_-_210888010_210888158	0.0733373	SOX2.p2	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast
hg18_v1_chr14_+_51397059_51397088	0.0733353	SOX2.p2	AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_-_142605739_142605739	0.073264	SOX2.p2	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B	NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B
hg18_v1_chr14_-_19572756_19572756	0.0732434	SOX2.p2	NM_001004714|OR4K13|390433|olfactory receptor, family 4, subfamily K, member 13
hg18_v1_chr2_-_183095308_183095751	0.0730514	SOX2.p2	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent	AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent
hg18_v1_chr7_-_44834702_44834741	0.0730095	SOX2.p2	CR615278|H2AFV|94239|H2A histone family, member V
hg18_v1_chrX_+_122923279_122923358	0.0729339	SOX2.p2	BC001765|STAG2|10735|stromal antigen 2
hg18_v1_chr15_-_76890626_76890985	0.0728155	SOX2.p2	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7
hg18_v1_chr13_-_107317460_107317460	0.0725806	SOX2.p2	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A
hg18_v1_chr20_+_34287814_34287860	0.0725548	SOX2.p2	BC001751|C20orf4|25980|chromosome 20 open reading frame 4	BC019311|C20orf4|25980|chromosome 20 open reading frame 4	NM_015511|C20orf4|25980|chromosome 20 open reading frame 4
hg18_v1_chr1_+_149165438_149165548	0.0725193	SOX2.p2	NM_001145415|SETDB1|9869|SET domain, bifurcated 1	NM_012432|SETDB1|9869|SET domain, bifurcated 1	AK302461|SETDB1|9869|SET domain, bifurcated 1	AK308335|SETDB1|9869|SET domain, bifurcated 1	BC028671|SETDB1|9869|SET domain, bifurcated 1	D31891|SETDB1|9869|SET domain, bifurcated 1	BC009362|SETDB1|9869|SET domain, bifurcated 1
hg18_v1_chr15_-_39623750_39623763	0.0724786	SOX2.p2	AK022794|RPAP1|26015|RNA polymerase II associated protein 1	NM_015540|RPAP1|26015|RNA polymerase II associated protein 1	AK308884|RPAP1|26015|RNA polymerase II associated protein 1
hg18_v1_chr10_+_59764718_59764967	0.0724351	SOX2.p2	CR603407|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR617065|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR619802|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR594114|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	CR620939|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)	BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
hg18_v1_chr3_-_113334657_113334841	0.0723525	SOX2.p2	BC030506|GCET2|257144|germinal center expressed transcript 2	AY212246|GCET2|257144|germinal center expressed transcript 2	CR625820|GCET2|257144|germinal center expressed transcript 2	AK313368|GCET2|257144|germinal center expressed transcript 2	AF521911|GCET2|257144|germinal center expressed transcript 2	NM_001190259|GCET2|257144|germinal center expressed transcript 2	NM_001190260|GCET2|257144|germinal center expressed transcript 2	NM_152785|GCET2|257144|germinal center expressed transcript 2
hg18_v1_chr4_+_160408447_160408447	0.0723395	SOX2.p2	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2	NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2
hg18_v1_chr6_+_42639745_42639765	0.0722223	SOX2.p2	BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr3_+_98641143_98641179	0.0721679	SOX2.p2	AK302040|EPHA6|285220|EPH receptor A6	AK310249|EPHA6|285220|EPH receptor A6	BC031881|EPHA6|285220|EPH receptor A6	BC067287|EPHA6|285220|EPH receptor A6	AK302080|EPHA6|285220|EPH receptor A6	AL133666|EPHA6|285220|EPH receptor A6	NM_173655|EPHA6|285220|EPH receptor A6
hg18_v1_chr3_-_117647011_117647031	0.0721317	SOX2.p2	AK315286|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr3_+_195336625_195336630	0.0720929	SOX2.p2	AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)	NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)	BC005178|HES1|3280|hairy and enhancer of split 1, (Drosophila)
hg18_v1_chr2_+_173129040_173129102	0.0720697	SOX2.p2	AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	CR594556|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1
hg18_v1_chr2_-_213111525_213111596	0.0719927	SOX2.p2	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
hg18_v1_chr15_+_54998181_54998207	0.0716274	SOX2.p2	BC050556|TCF12|6938|transcription factor 12	BC051769|TCF12|6938|transcription factor 12	M80627|TCF12|6938|transcription factor 12
hg18_v1_chr16_+_83349816_83349878	0.0714539	SOX2.p2	CR626589|USP10|9100|ubiquitin specific peptidase 10
hg18_v1_chr6_-_116973465_116973465	0.0713627	SOX2.p2	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)
hg18_v1_chr20_-_39680405_39680546	0.0713565	SOX2.p2	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6	BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6	AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6	BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6	AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6	NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6
hg18_v1_chr1_+_181871830_181872100	0.0713375	SOX2.p2	NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr4_-_44348414_44348414	0.0712466	SOX2.p2	AK096895|YIPF7|285525|Yip1 domain family, member 7	BC103995|YIPF7|285525|Yip1 domain family, member 7	BC103996|YIPF7|285525|Yip1 domain family, member 7	NM_182592|YIPF7|285525|Yip1 domain family, member 7
hg18_v1_chr8_-_145132582_145132622	0.0712356	SOX2.p2	AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10
hg18_v1_chr1_-_184696839_184696861	0.0712256	SOX2.p2	M33478|PDC|5132|phosducin	NM_002597|PDC|5132|phosducin
hg18_v1_chr5_+_140747586_140747635	0.0712037	SOX2.p2	BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4	BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4	AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4	NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4
hg18_v1_chr12_+_8557402_8557595	0.0710848	SOX2.p2	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D	NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D	AY297446|CLEC4D|338339|C-type lectin domain family 4, member D	AY115592|CLEC4D|338339|C-type lectin domain family 4, member D	AK314071|CLEC4D|338339|C-type lectin domain family 4, member D	AF411850|CLEC4D|338339|C-type lectin domain family 4, member D	AY486482|CLEC4D|338339|C-type lectin domain family 4, member D	AY486483|CLEC4D|338339|C-type lectin domain family 4, member D	DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D
hg18_v1_chr8_+_61753912_61754132	0.0709941	SOX2.p2	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7	BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7	BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7	BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7	BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7	CR602498|CHD7|55636|chromodomain helicase DNA binding protein 7
hg18_v1_chr17_-_24163517_24163629	0.0709736	SOX2.p2	AK095569|C17orf63|55731|chromosome 17 open reading frame 63
hg18_v1_chr2_+_122124034_122124196	0.0709378	SOX2.p2	BC047384|LOC254128|254128|hypothetical LOC254128	BC036624|LOC254128|254128|hypothetical LOC254128	AK098264|LOC254128|254128|hypothetical LOC254128
hg18_v1_chr2_+_108571209_108571226	0.070886	SOX2.p2	AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr12_-_15005761_15005869	0.0708374	SOX2.p2	CR596151|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590127|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR596642|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR616298|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR624952|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	CR590876|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta
hg18_v1_chr5_-_83716346_83716494	0.0708225	SOX2.p2	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr14_-_54948290_54948328	0.0707801	SOX2.p2	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)	NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)
hg18_v1_chr1_-_53566331_53566408	0.070759	SOX2.p2	NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr2_-_38683119_38683272	0.0707039	SOX2.p2	CR600541|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like
hg18_v1_chr8_+_82355322_82355385	0.0706111	SOX2.p2	AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)
hg18_v1_chr6_-_112186977_112186977	0.0705904	SOX2.p2	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES	NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES
hg18_v1_chr12_-_79855618_79855824	0.0705364	SOX2.p2	CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)	BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)	AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)	BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)	BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)	BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)	BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)	AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)	AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)	NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)
hg18_v1_chr16_-_56886380_56886451	0.0705075	SOX2.p2	AK302175|PRSS54|221191|protease, serine, 54	AK058068|PRSS54|221191|protease, serine, 54	BC057843|PRSS54|221191|protease, serine, 54	NM_001080492|PRSS54|221191|protease, serine, 54
hg18_v1_chr6_-_150099352_150099400	0.0704812	SOX2.p2	AK023349|NUP43|348995|nucleoporin 43kDa
hg18_v1_chr3_-_161584137_161584247	0.0704783	SOX2.p2	AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)
hg18_v1_chr16_-_76026431_76026511	0.0704655	SOX2.p2	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18	NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18
hg18_v1_chr3_-_117647053_117647074	0.0704435	SOX2.p2	BC033803|LSAMP|4045|limbic system-associated membrane protein	NM_002338|LSAMP|4045|limbic system-associated membrane protein
hg18_v1_chr20_+_34287793_34287813	0.0703866	SOX2.p2	CR590998|C20orf4|25980|chromosome 20 open reading frame 4	AL117419|C20orf4|25980|chromosome 20 open reading frame 4
hg18_v1_chr1_+_175407153_175407255	0.0703131	SOX2.p2	AB051534|FAM5B|57795|family with sequence similarity 5, member B	AB161694|FAM5B|57795|family with sequence similarity 5, member B	BC028036|FAM5B|57795|family with sequence similarity 5, member B	NM_021165|FAM5B|57795|family with sequence similarity 5, member B
hg18_v1_chr4_+_123380569_123380579	0.0702775	SOX2.p2	CR936613|KIAA1109|84162|KIAA1109
hg18_v1_chr12_-_47869134_47869153	0.0702465	SOX2.p2	CR593163|TUBA1A|7846|tubulin, alpha 1a	CR592605|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr2_+_36777336_36777365	0.0702288	SOX2.p2	NM_001177969|VIT|5212|vitrin	NM_001177970|VIT|5212|vitrin	NM_001177971|VIT|5212|vitrin	NM_001177972|VIT|5212|vitrin	NM_053276|VIT|5212|vitrin	AK299426|VIT|5212|vitrin
hg18_v1_chr15_+_57286313_57286376	0.0700877	SOX2.p2	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B	BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B	NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B	AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B
hg18_v1_chr3_+_138020550_138020682	0.0700686	SOX2.p2	BC050423|TMEM22|80723|transmembrane protein 22	NM_001097599|TMEM22|80723|transmembrane protein 22	NM_001097600|TMEM22|80723|transmembrane protein 22	NM_025246|TMEM22|80723|transmembrane protein 22	BC022557|TMEM22|80723|transmembrane protein 22	CR602043|TMEM22|80723|transmembrane protein 22	CR602057|TMEM22|80723|transmembrane protein 22	AK314079|TMEM22|80723|transmembrane protein 22	BC000111|TMEM22|80723|transmembrane protein 22	AL136661|TMEM22|80723|transmembrane protein 22	CR618483|TMEM22|80723|transmembrane protein 22
hg18_v1_chr2_+_28828332_28828494	0.0698891	SOX2.p2	BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme
hg18_v1_chr3_-_57505107_57505110	0.0697997	SOX2.p2	AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12	NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12
hg18_v1_chr18_-_49944986_49944994	0.0697031	SOX2.p2	AL110266|MBD2|8932|methyl-CpG binding domain protein 2
hg18_v1_chr6_-_135417522_135417641	0.0696692	SOX2.p2	EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)	EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)	BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)	AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)	BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)
hg18_v1_chr1_+_96959762_96959982	0.0696197	SOX2.p2	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2	AK092216|PTBP2|58155|polypyrimidine tract binding protein 2	AB051232|PTBP2|58155|polypyrimidine tract binding protein 2	AK299755|PTBP2|58155|polypyrimidine tract binding protein 2	AK299922|PTBP2|58155|polypyrimidine tract binding protein 2	AB209266|PTBP2|58155|polypyrimidine tract binding protein 2	AF530580|PTBP2|58155|polypyrimidine tract binding protein 2	AF530581|PTBP2|58155|polypyrimidine tract binding protein 2	AF176085|PTBP2|58155|polypyrimidine tract binding protein 2	AK299897|PTBP2|58155|polypyrimidine tract binding protein 2	BC016582|PTBP2|58155|polypyrimidine tract binding protein 2	AB051233|PTBP2|58155|polypyrimidine tract binding protein 2
hg18_v1_chrX_+_22200950_22201008	0.0696087	SOX2.p2	GQ355336|ZNF645|158506|zinc finger protein 645	AK098601|ZNF645|158506|zinc finger protein 645	NM_152577|ZNF645|158506|zinc finger protein 645	BC074910|ZNF645|158506|zinc finger protein 645	BC126190|ZNF645|158506|zinc finger protein 645	BC126192|ZNF645|158506|zinc finger protein 645
hg18_v1_chr18_+_41558089_41558115	0.0694429	SOX2.p2	NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg18_v1_chr22_-_30885200_30885308	0.0693636	SOX2.p2	BC139845|C22orf42|150297|chromosome 22 open reading frame 42	CR456485|C22orf42|150297|chromosome 22 open reading frame 42	NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42	BC040263|C22orf42|150297|chromosome 22 open reading frame 42
hg18_v1_chrX_+_122923236_122923272	0.0693191	SOX2.p2	NM_001042750|STAG2|10735|stromal antigen 2	NM_001042751|STAG2|10735|stromal antigen 2	NM_006603|STAG2|10735|stromal antigen 2	AL831939|STAG2|10735|stromal antigen 2	BX641002|STAG2|10735|stromal antigen 2	CR749433|STAG2|10735|stromal antigen 2	BX641003|STAG2|10735|stromal antigen 2
hg18_v1_chr20_+_17155669_17155674	0.0692596	SOX2.p2	BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr10_+_90414125_90414195	0.0692459	SOX2.p2	NM_001198828|LIPF|8513|lipase, gastric	NM_001198829|LIPF|8513|lipase, gastric	NM_001198830|LIPF|8513|lipase, gastric	NM_004190|LIPF|8513|lipase, gastric	AK301310|LIPF|8513|lipase, gastric	AK301320|LIPF|8513|lipase, gastric	AK308224|LIPF|8513|lipase, gastric	AK310128|LIPF|8513|lipase, gastric	AK312940|LIPF|8513|lipase, gastric	AK223468|LIPF|8513|lipase, gastric	AL833751|LIPF|8513|lipase, gastric	X05997|LIPF|8513|lipase, gastric
hg18_v1_chr2_+_27652892_27652896	0.0692305	SOX2.p2	CR749335|C2orf16|84226|chromosome 2 open reading frame 16	NM_032266|C2orf16|84226|chromosome 2 open reading frame 16	BC140828|C2orf16|84226|chromosome 2 open reading frame 16
hg18_v1_chr14_-_22722680_22722745	0.0691773	SOX2.p2	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8	AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter, L-type), member 8
hg18_v1_chr4_+_100704262_100704262	0.0691509	SOX2.p2	AK302602|MTTP|4547|microsomal triglyceride transfer protein	NM_000253|MTTP|4547|microsomal triglyceride transfer protein
hg18_v1_chr3_+_85858321_85858321	0.0691271	SOX2.p2	AF538973|CADM2|253559|cell adhesion molecule 2	NM_153184|CADM2|253559|cell adhesion molecule 2
hg18_v1_chr1_+_100088394_100088632	0.0690693	SOX2.p2	BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg18_v1_chr12_-_10846435_10846492	0.0688675	SOX2.p2	BC069091|TAS2R7|50837|taste receptor, type 2, member 7	BC093992|TAS2R7|50837|taste receptor, type 2, member 7	BC113561|TAS2R7|50837|taste receptor, type 2, member 7	NM_023919|TAS2R7|50837|taste receptor, type 2, member 7
hg18_v1_chr1_-_157003095_157003115	0.0688219	SOX2.p2	NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1	BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1
hg18_v1_chr20_+_31541565_31541700	0.0687577	SOX2.p2	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg18_v1_chr5_-_147191428_147191452	0.0687218	SOX2.p2	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr3_-_152478843_152478919	0.0687074	SOX2.p2	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14
hg18_v1_chr12_+_69046241_69046826	0.0686912	SOX2.p2	CR613566|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	CR614941|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4	AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg18_v1_chr3_-_69212192_69212234	0.0686741	SOX2.p2	AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3	DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3	CR598743|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3	BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3	NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3	AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3
hg18_v1_chr13_-_32658215_32658215	0.0686407	SOX2.p2	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13
hg18_v1_chr7_+_142768916_142768931	0.0684971	SOX2.p2	AK316227|ZYX|7791|zyxin
hg18_v1_chr12_+_27288446_27288462	0.0684273	SOX2.p2	AK291055|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr18_-_21186107_21186215	0.0683878	SOX2.p2	AJ518106|ZNF521|25925|zinc finger protein 521	BC032869|ZNF521|25925|zinc finger protein 521	AK027354|ZNF521|25925|zinc finger protein 521	AK293067|ZNF521|25925|zinc finger protein 521	NM_015461|ZNF521|25925|zinc finger protein 521
hg18_v1_chr19_-_63722979_63723022	0.0682868	SOX2.p2	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr13_+_23742846_23742950	0.068222	SOX2.p2	AK297394|SPATA13|221178|spermatogenesis associated 13	AK298717|SPATA13|221178|spermatogenesis associated 13	AK123031|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr10_+_170423_170423	0.068208	SOX2.p2	NM_001161482|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11	NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11
hg18_v1_chr2_-_190336168_190336197	0.0681139	SOX2.p2	AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1
hg18_v1_chr6_-_42218692_42218692	0.0680846	SOX2.p2	NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132
hg18_v1_chr9_-_113130533_113130533	0.0679298	SOX2.p2	BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2	NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2
hg18_v1_chr7_-_150411504_150411571	0.0678818	SOX2.p2	AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr4_+_74493331_74493360	0.0677557	SOX2.p2	CR623499|ALB|213|albumin	CR594507|ALB|213|albumin
hg18_v1_chr4_+_170817787_170817873	0.0677529	SOX2.p2	AK127483|CLCN3|1182|chloride channel 3
hg18_v1_chr11_+_123282307_123282348	0.0676821	SOX2.p2	BC137180|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	BC137206|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4	NM_001005197|OR8D4|338662|olfactory receptor, family 8, subfamily D, member 4
hg18_v1_chr12_+_74071145_74071160	0.0674658	SOX2.p2	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr8_+_79590890_79590890	0.0674597	SOX2.p2	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha	S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg18_v1_chr3_+_150028130_150028300	0.0670993	SOX2.p2	CR623808|CPB1|1360|carboxypeptidase B1 (tissue)	NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)	M81057|CPB1|1360|carboxypeptidase B1 (tissue)	AK313940|CPB1|1360|carboxypeptidase B1 (tissue)	AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)	BC015338|CPB1|1360|carboxypeptidase B1 (tissue)	DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)	DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)	BT009910|CPB1|1360|carboxypeptidase B1 (tissue)
hg18_v1_chr17_+_72795567_72795581	0.0670827	SOX2.p2	AK290368|SEPT9|10801|septin 9	NM_001113492|SEPT9|10801|septin 9
hg18_v1_chr4_-_68793928_68794006	0.0670766	SOX2.p2	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B	AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B	AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B	BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B	AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B	NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B
hg18_v1_chr3_-_48445719_48446049	0.0670425	SOX2.p2	AB007867|PLXNB1|5364|plexin B1	BC146793|PLXNB1|5364|plexin B1	NM_002673|PLXNB1|5364|plexin B1
hg18_v1_chr15_-_81667773_81667828	0.0670416	SOX2.p2	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3
hg18_v1_chr20_+_30160952_30161108	0.0669958	SOX2.p2	NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg18_v1_chr7_-_108311872_108311872	0.0669904	SOX2.p2	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66
hg18_v1_chr14_-_52689782_52689819	0.066908	SOX2.p2	NM_001160147|DDHD1|80821|DDHD domain containing 1	NM_001160148|DDHD1|80821|DDHD domain containing 1	NM_030637|DDHD1|80821|DDHD domain containing 1
hg18_v1_chr3_-_69381995_69382005	0.0669075	SOX2.p2	AK295045|FRMD4B|23150|FERM domain containing 4B
hg18_v1_chr10_-_119795663_119796405	0.0668894	SOX2.p2	DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)	NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)
hg18_v1_chr1_-_41259973_41260013	0.0668643	SOX2.p2	BC022037|SLFNL1|200172|schlafen-like 1	AK292296|SLFNL1|200172|schlafen-like 1	BC037879|SLFNL1|200172|schlafen-like 1	NM_001168247|SLFNL1|200172|schlafen-like 1	AK097609|SLFNL1|200172|schlafen-like 1	NM_144990|SLFNL1|200172|schlafen-like 1
hg18_v1_chr6_+_126282078_126282170	0.0668023	SOX2.p2	AK094706|NCOA7|135112|nuclear receptor coactivator 7
hg18_v1_chr20_+_17155617_17155630	0.0664592	SOX2.p2	NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr19_-_60941551_60941579	0.0664087	SOX2.p2	AY154464|NLRP9|338321|NLR family, pyrin domain containing 9	BC136583|NLRP9|338321|NLR family, pyrin domain containing 9	NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9
hg18_v1_chr20_-_23381478_23381481	0.0663846	SOX2.p2	BC121079|CST11|140880|cystatin 11	BC121080|CST11|140880|cystatin 11	AF335480|CST11|140880|cystatin 11	AF335481|CST11|140880|cystatin 11	NM_080830|CST11|140880|cystatin 11	NM_130794|CST11|140880|cystatin 11
hg18_v1_chr6_-_33879734_33879770	0.0663672	SOX2.p2	BC112314|MLN|4295|motilin	BC143981|MLN|4295|motilin	Y00695|MLN|4295|motilin	BC069675|MLN|4295|motilin	NM_001040109|MLN|4295|motilin	NM_001184698|MLN|4295|motilin	NM_002418|MLN|4295|motilin
hg18_v1_chr9_+_122923864_122923914	0.0663606	SOX2.p2	AK090600|CEP110|11064|centrosomal protein 110kDa	BC002932|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr5_+_72179685_72179709	0.066322	SOX2.p2	NM_153188|TNPO1|3842|transportin 1
hg18_v1_chr11_+_5798119_5798141	0.0663123	SOX2.p2	BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2	NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2
hg18_v1_chr1_+_226404037_226404283	0.0662499	SOX2.p2	BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa	NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa	BC035840|GJC2|57165|gap junction protein, gamma 2, 47kDa
hg18_v1_chr8_+_61592048_61592048	0.0662051	SOX2.p2	AK297576|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr15_-_62782427_62782469	0.0662042	SOX2.p2	AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2	AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590996|OAZ2|4947|ornithine decarboxylase antizyme 2	CR611250|OAZ2|4947|ornithine decarboxylase antizyme 2	AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2	CR603676|OAZ2|4947|ornithine decarboxylase antizyme 2	BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2	CR604161|OAZ2|4947|ornithine decarboxylase antizyme 2	BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2	CR590699|OAZ2|4947|ornithine decarboxylase antizyme 2	CR594645|OAZ2|4947|ornithine decarboxylase antizyme 2	CR596383|OAZ2|4947|ornithine decarboxylase antizyme 2	CR593659|OAZ2|4947|ornithine decarboxylase antizyme 2	CR616925|OAZ2|4947|ornithine decarboxylase antizyme 2	BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2	CR601685|OAZ2|4947|ornithine decarboxylase antizyme 2	CR606371|OAZ2|4947|ornithine decarboxylase antizyme 2	CR612625|OAZ2|4947|ornithine decarboxylase antizyme 2	BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr2_+_8739563_8739745	0.0661362	SOX2.p2	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR607131|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR626410|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR620423|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR611001|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	CR614653|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg18_v1_chr15_+_32048380_32048380	0.06613	SOX2.p2	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5	NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5
hg18_v1_chr1_+_93686154_93686466	0.0660467	SOX2.p2	NM_001024948|FNBP1L|54874|formin binding protein 1-like	NM_001164473|FNBP1L|54874|formin binding protein 1-like	NM_017737|FNBP1L|54874|formin binding protein 1-like	AY514449|FNBP1L|54874|formin binding protein 1-like
hg18_v1_chr14_-_59167139_59167145	0.0660427	SOX2.p2	CR593929|RTN1|6252|reticulon 1	CR603070|RTN1|6252|reticulon 1
hg18_v1_chr19_-_7604569_7604633	0.0660024	SOX2.p2	BC038715|PCP2|126006|Purkinje cell protein 2	NM_174895|PCP2|126006|Purkinje cell protein 2	AK130855|PCP2|126006|Purkinje cell protein 2	BC025387|PCP2|126006|Purkinje cell protein 2
hg18_v1_chr7_+_137795719_137795833	0.0659936	SOX2.p2	AF119042|TRIM24|8805|tripartite motif containing 24	BC028689|TRIM24|8805|tripartite motif containing 24	AF009353|TRIM24|8805|tripartite motif containing 24
hg18_v1_chr6_-_31740645_31741141	0.0659471	SOX2.p2	AJ420471|GPANK1|7918|G patch domain and ankyrin repeats 1	CR602237|GPANK1|7918|G patch domain and ankyrin repeats 1	CR622551|GPANK1|7918|G patch domain and ankyrin repeats 1	CR594031|GPANK1|7918|G patch domain and ankyrin repeats 1	CR596414|GPANK1|7918|G patch domain and ankyrin repeats 1	CR605292|GPANK1|7918|G patch domain and ankyrin repeats 1	CR605834|GPANK1|7918|G patch domain and ankyrin repeats 1	CR626322|GPANK1|7918|G patch domain and ankyrin repeats 1	BC008783|GPANK1|7918|G patch domain and ankyrin repeats 1	BC018875|GPANK1|7918|G patch domain and ankyrin repeats 1	NM_033177|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chr3_-_150569574_150569644	0.0659458	SOX2.p2	X75684|TM4SF1|4071|transmembrane 4 L six family member 1
hg18_v1_chr16_+_67131161_67131161	0.0659275	SOX2.p2	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr6_-_99957253_99957290	0.0658496	SOX2.p2	CR623227|SFRS18|25957|splicing factor, arginine/serine-rich 18
hg18_v1_chr2_+_3605611_3605640	0.0658185	SOX2.p2	X74803|RPS7|6201|ribosomal protein S7
hg18_v1_chr5_-_22889487_22889487	0.0657149	SOX2.p2	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr18_+_54682261_54682397	0.0656385	SOX2.p2	BC036366|ZNF532|55205|zinc finger protein 532
hg18_v1_chr6_-_94185780_94186028	0.0655378	SOX2.p2	BC126125|EPHA7|2045|EPH receptor A7	BC126151|EPHA7|2045|EPH receptor A7	BC143857|EPHA7|2045|EPH receptor A7	BC143858|EPHA7|2045|EPH receptor A7	L36642|EPHA7|2045|EPH receptor A7	BC027940|EPHA7|2045|EPH receptor A7	AK313529|EPHA7|2045|EPH receptor A7	AB209269|EPHA7|2045|EPH receptor A7	NM_004440|EPHA7|2045|EPH receptor A7
hg18_v1_chr6_-_33276347_33276415	0.0654811	SOX2.p2	M84820|RXRB|6257|retinoid X receptor, beta	AB209244|RXRB|6257|retinoid X receptor, beta	X63522|RXRB|6257|retinoid X receptor, beta	AK225842|RXRB|6257|retinoid X receptor, beta	BC001167|RXRB|6257|retinoid X receptor, beta	NM_021976|RXRB|6257|retinoid X receptor, beta	AK295759|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr1_-_102235377_102235380	0.06544	SOX2.p2	NM_058170|OLFM3|118427|olfactomedin 3
hg18_v1_chr12_+_68459015_68459087	0.0654316	SOX2.p2	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)	BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)	NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)	AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)
hg18_v1_chr6_+_168161401_168161429	0.0653993	SOX2.p2	AB012722|KIF25|3834|kinesin family member 25	NM_005355|KIF25|3834|kinesin family member 25	NM_030615|KIF25|3834|kinesin family member 25	BC130489|KIF25|3834|kinesin family member 25
hg18_v1_chr5_+_161207763_161207807	0.0652795	SOX2.p2	X13584|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	AK223447|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	X14766|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr1_+_86662356_86662518	0.0652694	SOX2.p2	NM_006536|CLCA2|9635|chloride channel accessory 2	AF043977|CLCA2|9635|chloride channel accessory 2	AK290348|CLCA2|9635|chloride channel accessory 2	AK307937|CLCA2|9635|chloride channel accessory 2	BC041096|CLCA2|9635|chloride channel accessory 2	AB026833|CLCA2|9635|chloride channel accessory 2	AF127980|CLCA2|9635|chloride channel accessory 2
hg18_v1_chr14_+_20283938_20283967	0.0652664	SOX2.p2	NM_006683|EDDM3A|10876|epididymal protein 3A	X76383|EDDM3A|10876|epididymal protein 3A	BC096698|EDDM3A|10876|epididymal protein 3A	BC096731|EDDM3A|10876|epididymal protein 3A	BC069407|EDDM3A|10876|epididymal protein 3A
hg18_v1_chr6_+_12622286_12622290	0.0651084	SOX2.p2	
hg18_v1_chr17_-_34811377_34811475	0.0649449	SOX2.p2	BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20	DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20	AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20	NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20
hg18_v1_chr2_+_86801081_86801300	0.064792	SOX2.p2	BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg18_v1_chr1_+_120055941_120056168	0.0646243	SOX2.p2	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase	AK315360|PHGDH|26227|phosphoglycerate dehydrogenase	BC011262|PHGDH|26227|phosphoglycerate dehydrogenase	CR617402|PHGDH|26227|phosphoglycerate dehydrogenase	AK309662|PHGDH|26227|phosphoglycerate dehydrogenase	AK310132|PHGDH|26227|phosphoglycerate dehydrogenase	AF171237|PHGDH|26227|phosphoglycerate dehydrogenase	CR619716|PHGDH|26227|phosphoglycerate dehydrogenase	BC000303|PHGDH|26227|phosphoglycerate dehydrogenase	CR592544|PHGDH|26227|phosphoglycerate dehydrogenase	CR611188|PHGDH|26227|phosphoglycerate dehydrogenase	CR622574|PHGDH|26227|phosphoglycerate dehydrogenase	BC001349|PHGDH|26227|phosphoglycerate dehydrogenase	CR600485|PHGDH|26227|phosphoglycerate dehydrogenase	CR612347|PHGDH|26227|phosphoglycerate dehydrogenase	CR616251|PHGDH|26227|phosphoglycerate dehydrogenase	BC023235|PHGDH|26227|phosphoglycerate dehydrogenase	DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase	EU176546|PHGDH|26227|phosphoglycerate dehydrogenase	CR456795|PHGDH|26227|phosphoglycerate dehydrogenase
hg18_v1_chr11_+_93501811_93502126	0.0646191	SOX2.p2	AY359023|PANX1|24145|pannexin 1	FM201789|PANX1|24145|pannexin 1
hg18_v1_chr1_+_46910086_46910193	0.0645401	SOX2.p2	BC067853|C1orf223|374973|chromosome 1 open reading frame 223	NM_001145474|C1orf223|374973|chromosome 1 open reading frame 223	BC057818|C1orf223|374973|chromosome 1 open reading frame 223	BC126318|C1orf223|374973|chromosome 1 open reading frame 223	BC144026|C1orf223|374973|chromosome 1 open reading frame 223	BC144027|C1orf223|374973|chromosome 1 open reading frame 223	FJ211596|C1orf223|374973|chromosome 1 open reading frame 223
hg18_v1_chr12_-_90100710_90100715	0.064491	SOX2.p2	AL355731|DCN|1634|decorin	CR613885|DCN|1634|decorin	CR616358|DCN|1634|decorin
hg18_v1_chr2_+_32142083_32142326	0.0644384	SOX2.p2	AB029006|SPAST|6683|spastin	BC150260|SPAST|6683|spastin	NM_014946|SPAST|6683|spastin	NM_199436|SPAST|6683|spastin	AJ246001|SPAST|6683|spastin
hg18_v1_chr12_+_49155798_49155910	0.0644083	SOX2.p2	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4
hg18_v1_chr5_+_140160966_140160966	0.0643697	SOX2.p2	AF152311|PCDHA3|56145|protocadherin alpha 3	AF152481|PCDHA3|56145|protocadherin alpha 3	BC069064|PCDHA3|56145|protocadherin alpha 3	BC129807|PCDHA3|56145|protocadherin alpha 3	NM_018906|PCDHA3|56145|protocadherin alpha 3	NM_031497|PCDHA3|56145|protocadherin alpha 3
hg18_v1_chr12_-_6586811_6586824	0.0643607	SOX2.p2	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4	NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr3_+_99671013_99671110	0.0643567	SOX2.p2	BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1
hg18_v1_chr17_-_45621312_45621316	0.0643532	SOX2.p2	J00111|COL1A1|1277|collagen, type I, alpha 1
hg18_v1_chr11_-_85074848_85074967	0.0641615	SOX2.p2	CR595564|CCDC89|220388|coiled-coil domain containing 89	BC044814|CCDC89|220388|coiled-coil domain containing 89	AK095478|CCDC89|220388|coiled-coil domain containing 89	NM_152723|CCDC89|220388|coiled-coil domain containing 89
hg18_v1_chr1_-_148508030_148508155	0.0641484	SOX2.p2	CR591178|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)
hg18_v1_chr4_-_123761615_123761661	0.0640945	SOX2.p2	DQ645417|IL21|59067|interleukin 21	BC069124|IL21|59067|interleukin 21	BC066258|IL21|59067|interleukin 21	BC066259|IL21|59067|interleukin 21	BC066260|IL21|59067|interleukin 21	BC066261|IL21|59067|interleukin 21	BC066262|IL21|59067|interleukin 21	NM_021803|IL21|59067|interleukin 21	AF254069|IL21|59067|interleukin 21
hg18_v1_chr8_-_110411283_110411338	0.0639907	SOX2.p2	AF283302|NUDCD1|84955|NudC domain containing 1	AK311583|NUDCD1|84955|NudC domain containing 1	AF521133|NUDCD1|84955|NudC domain containing 1	NM_001128211|NUDCD1|84955|NudC domain containing 1	AK307663|NUDCD1|84955|NudC domain containing 1
hg18_v1_chr12_-_43556424_43556513	0.0639877	SOX2.p2	NM_001145108|NELL2|4753|NEL-like 2 (chicken)	NM_006159|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr2_-_160764819_160764847	0.0639342	SOX2.p2	AM393800|ITGB6|3694|integrin, beta 6	M35198|ITGB6|3694|integrin, beta 6	NM_000888|ITGB6|3694|integrin, beta 6	BC121178|ITGB6|3694|integrin, beta 6	BC143656|ITGB6|3694|integrin, beta 6
hg18_v1_chr20_-_34005799_34005876	0.0639037	SOX2.p2	AF204271|SCAND1|51282|SCAN domain containing 1	BC000785|SCAND1|51282|SCAN domain containing 1	AF207829|SCAND1|51282|SCAN domain containing 1	NM_016558|SCAND1|51282|SCAN domain containing 1	NM_033630|SCAND1|51282|SCAN domain containing 1
hg18_v1_chr8_+_87947788_87947791	0.0639022	SOX2.p2	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1	BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1	NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1
hg18_v1_chr14_+_54238581_54238697	0.0637352	SOX2.p2	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A
hg18_v1_chr2_-_27432781_27432890	0.0636328	SOX2.p2	BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg18_v1_chr1_+_110683580_110683580	0.0636325	SOX2.p2	BC047479|RBM15|64783|RNA binding motif protein 15
hg18_v1_chr16_+_15435825_15435978	0.0634996	SOX2.p2	AK057180|C16orf45|89927|chromosome 16 open reading frame 45	NM_033201|C16orf45|89927|chromosome 16 open reading frame 45	AK293431|C16orf45|89927|chromosome 16 open reading frame 45	CR623458|C16orf45|89927|chromosome 16 open reading frame 45	BC008967|C16orf45|89927|chromosome 16 open reading frame 45	CR616063|C16orf45|89927|chromosome 16 open reading frame 45
hg18_v1_chr21_+_43903803_43903969	0.0634987	SOX2.p2	BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)	D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)
hg18_v1_chr5_+_180726874_180726893	0.0634134	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr4_+_88562726_88563080	0.0631824	SOX2.p2	NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR619203|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR626425|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR597296|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR620878|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	CR604538|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9
hg18_v1_chr4_+_41678469_41678596	0.0631799	SOX2.p2	NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1
hg18_v1_chr3_+_88270951_88270951	0.0631071	SOX2.p2	AF543494|ZNF654|55279|zinc finger protein 654	NM_018293|ZNF654|55279|zinc finger protein 654
hg18_v1_chr3_+_29297806_29298130	0.063006	SOX2.p2	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3	AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3
hg18_v1_chrX_-_134013644_134013946	0.0629477	SOX2.p2	BC008096|FAM127B|26071|family with sequence similarity 127, member B	BC071991|FAM127B|26071|family with sequence similarity 127, member B	AL117556|FAM127B|26071|family with sequence similarity 127, member B	BC000393|FAM127B|26071|family with sequence similarity 127, member B	BC019300|FAM127B|26071|family with sequence similarity 127, member B	CR601523|FAM127B|26071|family with sequence similarity 127, member B	NM_001078172|FAM127B|26071|family with sequence similarity 127, member B	NM_001134321|FAM127B|26071|family with sequence similarity 127, member B
hg18_v1_chr8_-_96030719_96030948	0.0627948	SOX2.p2	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1	NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1
hg18_v1_chr3_-_169295752_169295867	0.0626828	SOX2.p2	U55853|GOLIM4|27333|golgi integral membrane protein 4	BC143232|GOLIM4|27333|golgi integral membrane protein 4	BC143233|GOLIM4|27333|golgi integral membrane protein 4	BC171748|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr1_-_115060956_115061037	0.0626779	SOX2.p2	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr4_-_100703847_100703847	0.0625446	SOX2.p2	BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2
hg18_v1_chr4_+_106851415_106851418	0.0624959	SOX2.p2	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing
hg18_v1_chr2_-_74455161_74455369	0.0624742	SOX2.p2	AK315014|DCTN1|1639|dynactin 1	BC071583|DCTN1|1639|dynactin 1	NM_001135041|DCTN1|1639|dynactin 1	NM_023019|DCTN1|1639|dynactin 1
hg18_v1_chr5_-_150306298_150306335	0.0623284	SOX2.p2	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1	BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1
hg18_v1_chr7_+_143457083_143457138	0.0623157	SOX2.p2	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14	NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14
hg18_v1_chr6_+_34964999_34965157	0.0622476	SOX2.p2	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A	BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A
hg18_v1_chr6_+_17390910_17391056	0.0622138	SOX2.p2	AK055391|RBM24|221662|RNA binding motif protein 24	NM_153020|RBM24|221662|RNA binding motif protein 24	BC104808|RBM24|221662|RNA binding motif protein 24	BC104810|RBM24|221662|RNA binding motif protein 24	BC040928|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr8_+_79740813_79740938	0.0622136	SOX2.p2	NM_016010|FAM164A|51101|family with sequence similarity 164, member A	AK024711|FAM164A|51101|family with sequence similarity 164, member A	AK313723|FAM164A|51101|family with sequence similarity 164, member A	AF151820|FAM164A|51101|family with sequence similarity 164, member A	BC009074|FAM164A|51101|family with sequence similarity 164, member A	BC035905|FAM164A|51101|family with sequence similarity 164, member A
hg18_v1_chr4_-_54119102_54119112	0.0620223	SOX2.p2	AY358326|LNX1|84708|ligand of numb-protein X 1	CR598037|LNX1|84708|ligand of numb-protein X 1	BC034737|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr7_+_73136254_73136286	0.0618782	SOX2.p2	AF134379|LIMK1|3984|LIM domain kinase 1
hg18_v1_chr12_-_43556220_43556268	0.0617152	SOX2.p2	BC020544|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr6_-_74284522_74285965	0.061688	SOX2.p2	CR606729|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591544|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625724|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR619717|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603959|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625353|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590407|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ185041|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603651|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR616704|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603828|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR605857|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613015|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC012509|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624162|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625682|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606125|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR613220|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608362|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623409|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR595753|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610218|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR601985|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR603053|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR597006|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592032|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609311|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618335|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608355|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR617969|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604172|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610709|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M27364|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR609287|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR623212|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR602993|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR606781|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592507|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR610076|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014892|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC022412|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC065761|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR614602|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR620971|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR596406|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC014377|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR625936|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR604181|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR599305|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC063511|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK098587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF211972|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590392|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	M29548|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR624039|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR621964|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR593256|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR607669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR590136|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR592691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR611331|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR618646|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR591227|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	CR608799|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1
hg18_v1_chr5_+_85949511_85949517	0.0616867	SOX2.p2	AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc
hg18_v1_chr7_-_88262966_88262966	0.0615869	SOX2.p2	BC028365|C7orf62|219557|chromosome 7 open reading frame 62	NM_152706|C7orf62|219557|chromosome 7 open reading frame 62
hg18_v1_chr16_-_88613287_88613514	0.061515	SOX2.p2	AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	CR594535|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1
hg18_v1_chr16_+_52081836_52081927	0.0614958	SOX2.p2	CR608692|RBL2|5934|retinoblastoma-like 2 (p130)
hg18_v1_chr2_+_204509698_204509781	0.0614846	SOX2.p2	AK314985|ICOS|29851|inducible T-cell co-stimulator	AJ277832|ICOS|29851|inducible T-cell co-stimulator	NM_012092|ICOS|29851|inducible T-cell co-stimulator	BC028006|ICOS|29851|inducible T-cell co-stimulator	BC028210|ICOS|29851|inducible T-cell co-stimulator	AB023135|ICOS|29851|inducible T-cell co-stimulator
hg18_v1_chr11_-_128567302_128567302	0.0614364	SOX2.p2	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32	NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32
hg18_v1_chr7_-_92615593_92615620	0.0614239	SOX2.p2	AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like	AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like	DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like	AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like	NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like
hg18_v1_chr15_+_20444164_20444192	0.0613572	SOX2.p2	D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr3_-_110155237_110155366	0.0612031	SOX2.p2	AF110003|GUCA1C|9626|guanylate cyclase activator 1C	EU832759|GUCA1C|9626|guanylate cyclase activator 1C	GQ129299|GUCA1C|9626|guanylate cyclase activator 1C	AF110002|GUCA1C|9626|guanylate cyclase activator 1C	BC103993|GUCA1C|9626|guanylate cyclase activator 1C	BC103994|GUCA1C|9626|guanylate cyclase activator 1C	NM_005459|GUCA1C|9626|guanylate cyclase activator 1C
hg18_v1_chr20_+_10363949_10364004	0.0611633	SOX2.p2	BC020787|C20orf94|128710|chromosome 20 open reading frame 94	BC026094|C20orf94|128710|chromosome 20 open reading frame 94	NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94
hg18_v1_chr8_-_78075834_78075834	0.0610793	SOX2.p2	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2	NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2
hg18_v1_chr3_-_123223658_123223816	0.0610409	SOX2.p2	AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1	BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1	NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1	AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1
hg18_v1_chr5_+_150137700_150137700	0.0609703	SOX2.p2	AK125286|C5orf62|85027|chromosome 5 open reading frame 62	NM_032947|C5orf62|85027|chromosome 5 open reading frame 62
hg18_v1_chr14_+_95899602_95899660	0.0609042	SOX2.p2	AK000796|C14orf129|51527|chromosome 14 open reading frame 129	AK314423|C14orf129|51527|chromosome 14 open reading frame 129	AF151044|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr21_+_37661063_37661169	0.0607159	SOX2.p2	AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
hg18_v1_chr2_-_130646415_130646527	0.060623	SOX2.p2	BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
hg18_v1_chr12_-_6586736_6586789	0.0604761	SOX2.p2	X86691|CHD4|1108|chromodomain helicase DNA binding protein 4	BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4	BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4	BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4
hg18_v1_chr1_-_110085182_110085182	0.0604003	SOX2.p2	BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)	NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)
hg18_v1_chr2_+_219141761_219141921	0.060392	SOX2.p2	BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)
hg18_v1_chr17_+_7900926_7900928	0.0603203	SOX2.p2	
hg18_v1_chr6_+_71192862_71192894	0.0602483	SOX2.p2	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A	AB037832|FAM135A|57579|family with sequence similarity 135, member A
hg18_v1_chr2_+_234265059_234265086	0.0602216	SOX2.p2	NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6
hg18_v1_chr2_+_165804157_165804200	0.0602066	SOX2.p2	AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit
hg18_v1_chr3_-_122951200_122951299	0.0601116	SOX2.p2	BC065301|GOLGB1|2804|golgin B1	D25542|GOLGB1|2804|golgin B1	AB371588|GOLGB1|2804|golgin B1	AK300437|GOLGB1|2804|golgin B1	NM_004487|GOLGB1|2804|golgin B1	X75304|GOLGB1|2804|golgin B1
hg18_v1_chr21_-_42172476_42172659	0.0601043	SOX2.p2	AB051812|PRDM15|63977|PR domain containing 15	AB051813|PRDM15|63977|PR domain containing 15	AB051814|PRDM15|63977|PR domain containing 15	AB051815|PRDM15|63977|PR domain containing 15	NM_001040424|PRDM15|63977|PR domain containing 15	AF276513|PRDM15|63977|PR domain containing 15	AY078498|PRDM15|63977|PR domain containing 15	NM_022115|PRDM15|63977|PR domain containing 15
hg18_v1_chr15_-_88148538_88148610	0.0600403	SOX2.p2	AK298339|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr11_+_129484540_129484559	0.0599803	SOX2.p2	L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2
hg18_v1_chr5_-_147191334_147191392	0.059949	SOX2.p2	DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1	Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1
hg18_v1_chr14_+_74353417_74353490	0.0599028	SOX2.p2	BC023570|YLPM1|56252|YLP motif containing 1
hg18_v1_chrX_+_72140076_72140206	0.0598731	SOX2.p2	NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B
hg18_v1_chr4_-_84595967_84596048	0.0598141	SOX2.p2	BC095473|HELQ|113510|helicase, POLQ-like	BC011863|HELQ|113510|helicase, POLQ-like	BC065814|HELQ|113510|helicase, POLQ-like	BC111502|HELQ|113510|helicase, POLQ-like	AK308395|HELQ|113510|helicase, POLQ-like	AF436845|HELQ|113510|helicase, POLQ-like	AK312725|HELQ|113510|helicase, POLQ-like	AK128665|HELQ|113510|helicase, POLQ-like	BC015428|HELQ|113510|helicase, POLQ-like	NM_133636|HELQ|113510|helicase, POLQ-like
hg18_v1_chr9_+_81377289_81377399	0.0597684	SOX2.p2	BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr4_+_175441619_175441757	0.0597456	SOX2.p2	NM_001145314|KIAA1712|80817|KIAA1712	BC038667|KIAA1712|80817|KIAA1712	AB051499|KIAA1712|80817|KIAA1712	AK094961|KIAA1712|80817|KIAA1712	AK292484|KIAA1712|80817|KIAA1712
hg18_v1_chr5_+_15553539_15553549	0.0596284	SOX2.p2	BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr12_+_27288475_27288503	0.059593	SOX2.p2	CR602115|STK38L|23012|serine/threonine kinase 38 like	AK304755|STK38L|23012|serine/threonine kinase 38 like	CR606717|STK38L|23012|serine/threonine kinase 38 like
hg18_v1_chr7_+_26158257_26158660	0.0595528	SOX2.p2	NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3
hg18_v1_chr20_-_39199936_39200109	0.0595412	SOX2.p2	
hg18_v1_chr7_+_107008439_107008453	0.0595085	SOX2.p2	NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29	BT006981|BCAP29|55973|B-cell receptor-associated protein 29
hg18_v1_chr2_-_128332143_128332160	0.059443	SOX2.p2	CR597179|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D
hg18_v1_chr15_-_93671314_93671332	0.059391	SOX2.p2	BC040875|LOC400456|400456|hypothetical LOC400456
hg18_v1_chr6_-_90119158_90119160	0.0592933	SOX2.p2	AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr5_-_125956996_125956999	0.0592126	SOX2.p2	CR595547|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1
hg18_v1_chr1_+_240078655_240078762	0.0592038	SOX2.p2	NM_003686|EXO1|9156|exonuclease 1	NM_006027|EXO1|9156|exonuclease 1	AF042282|EXO1|9156|exonuclease 1	AF091740|EXO1|9156|exonuclease 1	AF060479|EXO1|9156|exonuclease 1	AF084974|EXO1|9156|exonuclease 1
hg18_v1_chr12_-_52868855_52869052	0.0590832	SOX2.p2	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1	AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg18_v1_chr20_-_43410437_43410501	0.0590827	SOX2.p2	CR542045|SDC4|6385|syndecan 4	CR542074|SDC4|6385|syndecan 4	DQ890718|SDC4|6385|syndecan 4	DQ893898|SDC4|6385|syndecan 4	X67016|SDC4|6385|syndecan 4	AK222695|SDC4|6385|syndecan 4	AK223243|SDC4|6385|syndecan 4	AK303964|SDC4|6385|syndecan 4	AK312507|SDC4|6385|syndecan 4	BC030805|SDC4|6385|syndecan 4	D13292|SDC4|6385|syndecan 4	NM_002999|SDC4|6385|syndecan 4
hg18_v1_chr17_-_44847214_44847214	0.0590124	SOX2.p2	BC095460|PHB|5245|prohibitin
hg18_v1_chr21_-_26029830_26029854	0.0589698	SOX2.p2	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6	BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
hg18_v1_chr6_+_43846735_43846961	0.0589648	SOX2.p2	M27281|VEGFA|7422|vascular endothelial growth factor A	M32977|VEGFA|7422|vascular endothelial growth factor A	AY047581|VEGFA|7422|vascular endothelial growth factor A	X62568|VEGFA|7422|vascular endothelial growth factor A	EU832814|VEGFA|7422|vascular endothelial growth factor A	GQ129408|VEGFA|7422|vascular endothelial growth factor A	AB021221|VEGFA|7422|vascular endothelial growth factor A	AB451322|VEGFA|7422|vascular endothelial growth factor A	AB451451|VEGFA|7422|vascular endothelial growth factor A	AF091352|VEGFA|7422|vascular endothelial growth factor A	AF214570|VEGFA|7422|vascular endothelial growth factor A	AF430806|VEGFA|7422|vascular endothelial growth factor A	AF486837|VEGFA|7422|vascular endothelial growth factor A	AJ010438|VEGFA|7422|vascular endothelial growth factor A	AY263145|VEGFA|7422|vascular endothelial growth factor A	AY500353|VEGFA|7422|vascular endothelial growth factor A	AY766116|VEGFA|7422|vascular endothelial growth factor A	DQ229900|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr4_-_158111916_158111940	0.0589122	SOX2.p2	BC136662|PDGFC|56034|platelet derived growth factor C	BC144348|PDGFC|56034|platelet derived growth factor C
hg18_v1_chr4_+_41309482_41309560	0.0589062	SOX2.p2	AK294774|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr1_+_117345894_117345962	0.058903	SOX2.p2	AK307542|CD101|9398|CD101 molecule	NM_004258|CD101|9398|CD101 molecule	AK298237|CD101|9398|CD101 molecule	BC130327|CD101|9398|CD101 molecule	BC136484|CD101|9398|CD101 molecule	BC171768|CD101|9398|CD101 molecule	Z33642|CD101|9398|CD101 molecule
hg18_v1_chr16_-_15741438_15741475	0.0588192	SOX2.p2	BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr9_-_106338914_106338957	0.0588161	SOX2.p2	NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3
hg18_v1_chr9_+_81377419_81377592	0.0588077	SOX2.p2	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_-_111120817_111120853	0.0588021	SOX2.p2	AK315617|C5orf13|9315|chromosome 5 open reading frame 13	NM_004772|C5orf13|9315|chromosome 5 open reading frame 13	U30521|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr3_-_115826481_115826488	0.0587961	SOX2.p2	AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr3_+_184454286_184454314	0.0587693	SOX2.p2	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg18_v1_chr22_-_34566367_34566575	0.05872	SOX2.p2	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CR600481|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr21_+_16024157_16024235	0.0586077	SOX2.p2	AF170562|USP25|29761|ubiquitin specific peptidase 25	BC075792|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr21_+_34112456_34112625	0.0585899	SOX2.p2	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)	AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)	AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)
hg18_v1_chr17_+_43480724_43480779	0.0585013	SOX2.p2	X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr20_-_19984685_19984689	0.0584469	SOX2.p2	BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)	NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)
hg18_v1_chr8_+_17866373_17866408	0.0583317	SOX2.p2	AF068293|PCM1|5108|pericentriolar material 1
hg18_v1_chr12_+_74071116_74071137	0.058329	SOX2.p2	BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2
hg18_v1_chr10_+_32896656_32896769	0.0582802	SOX2.p2	AK023093|C10orf68|79741|chromosome 10 open reading frame 68	NM_024688|C10orf68|79741|chromosome 10 open reading frame 68	BC125090|C10orf68|79741|chromosome 10 open reading frame 68	BC125091|C10orf68|79741|chromosome 10 open reading frame 68
hg18_v1_chr20_+_39199263_39199290	0.0581513	SOX2.p2	AB210028|PLCG1|5335|phospholipase C, gamma 1
hg18_v1_chr2_-_158439868_158439868	0.0581461	SOX2.p2	BC033867|ACVR1|90|activin A receptor, type I	BC036748|ACVR1|90|activin A receptor, type I	NM_001105|ACVR1|90|activin A receptor, type I
hg18_v1_chr18_+_37789209_37789254	0.0581016	SOX2.p2	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3	AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3	BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3	DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3
hg18_v1_chr3_+_194793615_194793683	0.0578914	SOX2.p2	NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)	NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr10_+_127398215_127398389	0.0578469	SOX2.p2	BX648348|C10orf137|26098|chromosome 10 open reading frame 137	AK091507|C10orf137|26098|chromosome 10 open reading frame 137
hg18_v1_chr3_+_69895310_69895396	0.0578353	SOX2.p2	AK296129|MITF|4286|microphthalmia-associated transcription factor	NM_001184967|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr12_-_90100733_90100936	0.0578084	SOX2.p2	CR595819|DCN|1634|decorin	NM_001920|DCN|1634|decorin
hg18_v1_chr5_+_161208475_161208475	0.0577855	SOX2.p2	NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg18_v1_chr15_+_64372876_64373031	0.0575789	SOX2.p2	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like
hg18_v1_chr16_-_74086779_74086782	0.0575675	SOX2.p2	
hg18_v1_chr20_+_30259235_30259357	0.0575012	SOX2.p2	AK291033|POFUT1|23509|protein O-fucosyltransferase 1	AF375884|POFUT1|23509|protein O-fucosyltransferase 1	AK300810|POFUT1|23509|protein O-fucosyltransferase 1	AK303068|POFUT1|23509|protein O-fucosyltransferase 1	BC000582|POFUT1|23509|protein O-fucosyltransferase 1	NM_015352|POFUT1|23509|protein O-fucosyltransferase 1	NM_172236|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr4_+_46728051_46728158	0.0574637	SOX2.p2	NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1	AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg18_v1_chr7_+_128795280_128795369	0.057435	SOX2.p2	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr12_-_69434330_69434503	0.0574109	SOX2.p2	BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R
hg18_v1_chr7_-_143230096_143230300	0.0573718	SOX2.p2	AB018281|FAM115A|9747|family with sequence similarity 115, member A	NM_014719|FAM115A|9747|family with sequence similarity 115, member A	BC000609|FAM115A|9747|family with sequence similarity 115, member A	AK291605|FAM115A|9747|family with sequence similarity 115, member A	AK001640|FAM115A|9747|family with sequence similarity 115, member A
hg18_v1_chr20_+_56903595_56903646	0.0573109	SOX2.p2	AK093534|GNAS|2778|GNAS complex locus
hg18_v1_chr5_-_149772469_149772526	0.0571837	SOX2.p2	CR615386|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621994|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR595353|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR625117|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR622356|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR608107|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR621213|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR601246|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	CR619151|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain
hg18_v1_chr3_-_14963943_14963978	0.0571494	SOX2.p2	
hg18_v1_chr7_+_139175420_139175703	0.0571365	SOX2.p2	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)	NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)	BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)	CR625096|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)	AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)	M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)	S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)
hg18_v1_chr14_+_51396799_51396881	0.0570147	SOX2.p2	NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr4_+_91375204_91375204	0.0569942	SOX2.p2	BC051694|FAM190A|401145|family with sequence similarity 190, member A	NM_207491|FAM190A|401145|family with sequence similarity 190, member A
hg18_v1_chr4_-_120769590_120769631	0.0568946	SOX2.p2	
hg18_v1_chr16_+_68890559_68890596	0.0568692	SOX2.p2	AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR593012|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	CR625899|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B
hg18_v1_chr6_-_49820030_49820126	0.0568521	SOX2.p2	AK223380|CRISP3|10321|cysteine-rich secretory protein 3	X94323|CRISP3|10321|cysteine-rich secretory protein 3	AK303966|CRISP3|10321|cysteine-rich secretory protein 3	AK313387|CRISP3|10321|cysteine-rich secretory protein 3	AK292786|CRISP3|10321|cysteine-rich secretory protein 3	NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3	NM_006061|CRISP3|10321|cysteine-rich secretory protein 3
hg18_v1_chr1_-_150805852_150805871	0.0568354	SOX2.p2	BC131716|LCE3E|353145|late cornified envelope 3E	NM_178435|LCE3E|353145|late cornified envelope 3E
hg18_v1_chr3_-_169295869_169296382	0.0568259	SOX2.p2	AK307718|GOLIM4|27333|golgi integral membrane protein 4	AK307557|GOLIM4|27333|golgi integral membrane protein 4	NM_014498|GOLIM4|27333|golgi integral membrane protein 4
hg18_v1_chr1_+_36520751_36520823	0.056806	SOX2.p2	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3
hg18_v1_chr7_-_136679045_136679117	0.0567129	SOX2.p2	CR609152|PTN|5764|pleiotrophin	CR624136|PTN|5764|pleiotrophin	CR619084|PTN|5764|pleiotrophin	BC005916|PTN|5764|pleiotrophin	NM_002825|PTN|5764|pleiotrophin	M57399|PTN|5764|pleiotrophin
hg18_v1_chr8_+_12847521_12847553	0.0566522	SOX2.p2	AK296010|KIAA1456|57604|KIAA1456	NM_020844|KIAA1456|57604|KIAA1456
hg18_v1_chr2_+_101235695_101235779	0.0565693	SOX2.p2	CR611582|C2orf29|55571|chromosome 2 open reading frame 29	NM_017546|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr1_+_191295206_191295216	0.0565519	SOX2.p2	CR936683|TROVE2|6738|TROVE domain family, member 2
hg18_v1_chr4_+_83570789_83570838	0.0565164	SOX2.p2	AK022656|ENOPH1|58478|enolase-phosphatase 1	CR615673|ENOPH1|58478|enolase-phosphatase 1	BC065815|ENOPH1|58478|enolase-phosphatase 1	CR623426|ENOPH1|58478|enolase-phosphatase 1	CR593619|ENOPH1|58478|enolase-phosphatase 1	BC001317|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr5_+_31229609_31229659	0.0563455	SOX2.p2	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)
hg18_v1_chr6_-_29752909_29752909	0.0563264	SOX2.p2	BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)	BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)	NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)
hg18_v1_chr14_+_51397113_51397115	0.0563097	SOX2.p2	AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr11_+_62231741_62231882	0.0562244	SOX2.p2	AK311933|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	BC015563|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR625883|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3	CR620191|GNG3|2785|guanine nucleotide binding protein (G protein), gamma 3
hg18_v1_chr1_+_100590619_100590638	0.0561259	SOX2.p2	AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr6_-_2696152_2696198	0.0559883	SOX2.p2	BX647582|MYLK4|340156|myosin light chain kinase family, member 4	NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4	AK096893|MYLK4|340156|myosin light chain kinase family, member 4
hg18_v1_chr10_+_35455986_35456061	0.0559776	SOX2.p2	CR613240|CREM|1390|cAMP responsive element modulator
hg18_v1_chr17_-_36294962_36295023	0.0556778	SOX2.p2	DQ890783|KRT20|54474|keratin 20	DQ896754|KRT20|54474|keratin 20	BC031559|KRT20|54474|keratin 20	AK312744|KRT20|54474|keratin 20	NM_019010|KRT20|54474|keratin 20
hg18_v1_chr22_-_34566210_34566264	0.0556699	SOX2.p2	AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr1_-_201422490_201422532	0.0556565	SOX2.p2	BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr5_-_39460787_39460855	0.0556318	SOX2.p2	AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr7_+_128795178_128795266	0.0555699	SOX2.p2	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_+_84540921_84540921	0.055517	SOX2.p2	BC037973|SAMD13|148418|sterile alpha motif domain containing 13	NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13
hg18_v1_chr21_-_30781537_30781625	0.0554627	SOX2.p2	NM_181608|KRTAP19-2|337969|keratin associated protein 19-2	AB180041|KRTAP19-2|337969|keratin associated protein 19-2
hg18_v1_chr14_+_51397134_51397150	0.0554457	SOX2.p2	AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr2_+_108637698_108637699	0.0553988	SOX2.p2	NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr1_+_169549996_169550109	0.0552732	SOX2.p2	BC002780|FMO4|2329|flavin containing monooxygenase 4	NM_002022|FMO4|2329|flavin containing monooxygenase 4	Z11737|FMO4|2329|flavin containing monooxygenase 4
hg18_v1_chr13_+_31503436_31503446	0.0552584	SOX2.p2	AL049784|FRY|10129|furry homolog (Drosophila)	NM_023037|FRY|10129|furry homolog (Drosophila)	U50534|FRY|10129|furry homolog (Drosophila)
hg18_v1_chr21_+_16024241_16024583	0.0551014	SOX2.p2	NM_013396|USP25|29761|ubiquitin specific peptidase 25	AF134213|USP25|29761|ubiquitin specific peptidase 25	BC015930|USP25|29761|ubiquitin specific peptidase 25	FJ763652|USP25|29761|ubiquitin specific peptidase 25
hg18_v1_chr4_-_175441192_175441426	0.0549792	SOX2.p2	AF174596|FBXO8|26269|F-box protein 8	AF233224|FBXO8|26269|F-box protein 8	CR592920|FBXO8|26269|F-box protein 8	AF115514|FBXO8|26269|F-box protein 8	AY358721|FBXO8|26269|F-box protein 8	BC014679|FBXO8|26269|F-box protein 8	CR617381|FBXO8|26269|F-box protein 8	CR620156|FBXO8|26269|F-box protein 8	CR620476|FBXO8|26269|F-box protein 8	AF201932|FBXO8|26269|F-box protein 8	AK026319|FBXO8|26269|F-box protein 8	BC040456|FBXO8|26269|F-box protein 8	AK314483|FBXO8|26269|F-box protein 8
hg18_v1_chr11_+_33236435_33236455	0.0549648	SOX2.p2	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3
hg18_v1_chr19_+_56506907_56506913	0.0549645	SOX2.p2	NM_001101372|IGLON5|402665|IgLON family member 5
hg18_v1_chr7_-_150411345_150411502	0.0547746	SOX2.p2	NM_031434|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR598305|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR593449|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	AY358481|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR611070|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1	CR624473|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1
hg18_v1_chr11_-_85115105_85115158	0.054664	SOX2.p2	BX647671|SYTL2|54843|synaptotagmin-like 2	AK127504|SYTL2|54843|synaptotagmin-like 2	NM_206927|SYTL2|54843|synaptotagmin-like 2	NM_206928|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr6_-_90119068_90119156	0.0546596	SOX2.p2	AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr8_-_74821610_74821633	0.0544428	SOX2.p2	Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK126149|LOC729696|729696|hypothetical protein LOC729696	AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr6_-_33276416_33276416	0.054435	SOX2.p2	AK301096|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr14_-_105762742_105763023	0.0543664	SOX2.p2	
hg18_v1_chr19_-_20540380_20540470	0.0543576	SOX2.p2	BC015765|ZNF737|100129842|zinc finger protein 737	NM_001159293|ZNF737|100129842|zinc finger protein 737
hg18_v1_chr1_+_183392991_183393047	0.0542758	SOX2.p2	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr2_+_211129567_211129702	0.0542513	SOX2.p2	AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial
hg18_v1_chr8_+_67096344_67096402	0.0541789	SOX2.p2	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg18_v1_chr8_-_103206310_103206310	0.0541753	SOX2.p2	NM_001040630|NCALD|83988|neurocalcin delta
hg18_v1_chr21_-_31107431_31107440	0.0541708	SOX2.p2	BC130397|KRTAP8-1|337879|keratin associated protein 8-1	BC133033|KRTAP8-1|337879|keratin associated protein 8-1	AB096961|KRTAP8-1|337879|keratin associated protein 8-1	AJ457064|KRTAP8-1|337879|keratin associated protein 8-1	NM_175857|KRTAP8-1|337879|keratin associated protein 8-1
hg18_v1_chr1_-_43692134_43692246	0.0540236	SOX2.p2	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)	AY037165|HYI|81888|hydroxypyruvate isomerase (putative)	AY775560|HYI|81888|hydroxypyruvate isomerase (putative)	NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)	NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)
hg18_v1_chr4_-_104240413_104240485	0.0539786	SOX2.p2	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR601062|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR625169|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR599040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	CR605040|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2	NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2
hg18_v1_chr2_+_114390975_114390991	0.0539624	SOX2.p2	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr6_-_167195987_167196010	0.0539282	SOX2.p2	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr6_+_131936057_131936115	0.0539192	SOX2.p2	AY074488|ARG1|383|arginase, liver	NM_000045|ARG1|383|arginase, liver	BC005321|ARG1|383|arginase, liver	M14502|ARG1|383|arginase, liver	CR615342|ARG1|383|arginase, liver	BC020653|ARG1|383|arginase, liver	DQ892039|ARG1|383|arginase, liver	DQ895230|ARG1|383|arginase, liver	BT006741|ARG1|383|arginase, liver
hg18_v1_chr8_-_119192985_119193299	0.0538223	SOX2.p2	AK313129|EXT1|2131|exostosin 1	S79639|EXT1|2131|exostosin 1	NM_000127|EXT1|2131|exostosin 1
hg18_v1_chr5_+_55098469_55098495	0.0538123	SOX2.p2	NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr6_+_29382381_29382445	0.0538025	SOX2.p2	BC136905|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1	NM_030946|OR14J1|442191|olfactory receptor, family 14, subfamily J, member 1
hg18_v1_chr5_-_76418661_76418937	0.0536012	SOX2.p2	BC007239|ZBED3|84327|zinc finger, BED-type containing 3	NM_032367|ZBED3|84327|zinc finger, BED-type containing 3	AK223624|ZBED3|84327|zinc finger, BED-type containing 3
hg18_v1_chr3_+_197951203_197951242	0.0535151	SOX2.p2	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr2_-_25047988_25048111	0.0535143	SOX2.p2	AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27
hg18_v1_chr8_-_105670300_105670398	0.0534763	SOX2.p2	DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12	DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12	BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12	AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12	AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12	CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr4_+_53938579_53938585	0.0534285	SOX2.p2	BC110383|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr1_+_100590640_100590743	0.053212	SOX2.p2	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)
hg18_v1_chr6_-_30763650_30763650	0.0531202	SOX2.p2	AK124880|KIAA1949|170954|KIAA1949	NM_133471|KIAA1949|170954|KIAA1949
hg18_v1_chr2_+_216695062_216695162	0.0531178	SOX2.p2	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg18_v1_chr12_-_107551744_107551780	0.0531091	SOX2.p2	AK290395|SELPLG|6404|selectin P ligand	BC029782|SELPLG|6404|selectin P ligand
hg18_v1_chr6_-_117853710_117853738	0.0529598	SOX2.p2	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase	NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase
hg18_v1_chr16_-_45422540_45422638	0.0529476	SOX2.p2	BC056676|C16orf87|388272|chromosome 16 open reading frame 87	BX647945|C16orf87|388272|chromosome 16 open reading frame 87	NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87
hg18_v1_chr11_+_116608447_116608839	0.0529116	SOX2.p2	NM_207343|RNF214|257160|ring finger protein 214	AK298923|RNF214|257160|ring finger protein 214	BC064581|RNF214|257160|ring finger protein 214	AK300160|RNF214|257160|ring finger protein 214	BC146891|RNF214|257160|ring finger protein 214	BC146901|RNF214|257160|ring finger protein 214	NM_001077239|RNF214|257160|ring finger protein 214
hg18_v1_chr1_+_109043711_109043726	0.052775	SOX2.p2	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
hg18_v1_chr5_+_126140718_126140743	0.0526797	SOX2.p2	BC103723|LMNB1|4001|lamin B1	AK303084|LMNB1|4001|lamin B1	NM_001198557|LMNB1|4001|lamin B1
hg18_v1_chr6_+_42639929_42640035	0.0526317	SOX2.p2	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr1_-_67292286_67292443	0.0526181	SOX2.p2	BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1
hg18_v1_chr3_-_112796855_112796855	0.052556	SOX2.p2	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2
hg18_v1_chr17_+_50699965_50700006	0.0525369	SOX2.p2	AK295726|HLF|3131|hepatic leukemia factor	AK074289|HLF|3131|hepatic leukemia factor
hg18_v1_chr16_+_73590739_73590783	0.0525235	SOX2.p2	AK294434|ZNRF1|84937|zinc and ring finger 1	BC007235|ZNRF1|84937|zinc and ring finger 1	AF378524|ZNRF1|84937|zinc and ring finger 1	AL136903|ZNRF1|84937|zinc and ring finger 1
hg18_v1_chr11_-_62229477_62229665	0.0525096	SOX2.p2	CR590725|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr14_-_30746577_30746796	0.0524813	SOX2.p2	
hg18_v1_chr6_+_148705646_148705720	0.0523638	SOX2.p2	AB018333|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr12_+_53177758_53177786	0.0522016	SOX2.p2	NM_005337|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr18_-_71049977_71050001	0.052188	SOX2.p2	
hg18_v1_chr9_+_103200939_103201191	0.0519614	SOX2.p2	AK290163|ZNF189|7743|zinc finger protein 189	AK313655|ZNF189|7743|zinc finger protein 189	AK308935|ZNF189|7743|zinc finger protein 189	NM_003452|ZNF189|7743|zinc finger protein 189	NM_197977|ZNF189|7743|zinc finger protein 189	BC065718|ZNF189|7743|zinc finger protein 189	BC092425|ZNF189|7743|zinc finger protein 189	AF025770|ZNF189|7743|zinc finger protein 189	U75454|ZNF189|7743|zinc finger protein 189	U95992|ZNF189|7743|zinc finger protein 189	BC126120|ZNF189|7743|zinc finger protein 189	BC143876|ZNF189|7743|zinc finger protein 189	BC143877|ZNF189|7743|zinc finger protein 189
hg18_v1_chr17_+_55052185_55052270	0.0519416	SOX2.p2	
hg18_v1_chr6_+_135544138_135544145	0.0519174	SOX2.p2	AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)
hg18_v1_chr15_-_43457916_43458146	0.0518876	SOX2.p2	S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg18_v1_chr20_+_30259360_30259424	0.0518754	SOX2.p2	CR617950|POFUT1|23509|protein O-fucosyltransferase 1	AL832023|POFUT1|23509|protein O-fucosyltransferase 1
hg18_v1_chr14_+_95915774_95915774	0.0518673	SOX2.p2	BC004818|C14orf129|51527|chromosome 14 open reading frame 129	NM_016472|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr14_+_20222575_20222657	0.0518483	SOX2.p2	CR623403|RNASE4|6038|ribonuclease, RNase A family, 4	CR622207|RNASE4|6038|ribonuclease, RNase A family, 4	AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BC015520|RNASE4|6038|ribonuclease, RNase A family, 4	BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5	BX248010|RNASE4|6038|ribonuclease, RNase A family, 4
hg18_v1_chr14_+_59782222_59782227	0.0517954	SOX2.p2	AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg18_v1_chr10_+_60606352_60606437	0.0516871	SOX2.p2	AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	CR593164|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like
hg18_v1_chrX_+_51653348_51653538	0.0516071	SOX2.p2	NM_001005333|MAGED1|9500|melanoma antigen family D, 1	NM_006986|MAGED1|9500|melanoma antigen family D, 1	AF258554|MAGED1|9500|melanoma antigen family D, 1	AK298574|MAGED1|9500|melanoma antigen family D, 1	AK308706|MAGED1|9500|melanoma antigen family D, 1	BC014070|MAGED1|9500|melanoma antigen family D, 1	AK314053|MAGED1|9500|melanoma antigen family D, 1	AK074092|MAGED1|9500|melanoma antigen family D, 1	AF217963|MAGED1|9500|melanoma antigen family D, 1	AF300328|MAGED1|9500|melanoma antigen family D, 1
hg18_v1_chr3_-_48729593_48729714	0.051532	SOX2.p2	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2	CR591987|IP6K2|51447|inositol hexakisphosphate kinase 2	AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2	AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2	BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2	CR607564|IP6K2|51447|inositol hexakisphosphate kinase 2	CR624222|IP6K2|51447|inositol hexakisphosphate kinase 2	BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2	BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2	CR618536|IP6K2|51447|inositol hexakisphosphate kinase 2	AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2	AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2	CR595634|IP6K2|51447|inositol hexakisphosphate kinase 2	AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2	AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2	AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2	BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2	NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2
hg18_v1_chr8_-_74821636_74821789	0.0515125	SOX2.p2	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr7_-_158304062_158304201	0.0513723	SOX2.p2	AK126214|ESYT2|57488|extended synaptotagmin-like protein 2
hg18_v1_chrX_+_118598325_118598325	0.0512852	SOX2.p2	BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)	NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A (RAD6 homolog)
hg18_v1_chr5_+_72287509_72287573	0.0512451	SOX2.p2	BC137070|FCHO2|115548|FCH domain only 2	NM_001146032|FCHO2|115548|FCH domain only 2	NM_138782|FCHO2|115548|FCH domain only 2
hg18_v1_chr14_+_68728235_68728304	0.0512216	SOX2.p2	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2	NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2	AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2	BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2
hg18_v1_chr1_-_238842071_238842084	0.0511411	SOX2.p2	AK024848|GREM2|64388|gremlin 2	NM_022469|GREM2|64388|gremlin 2
hg18_v1_chr22_+_27994216_27994339	0.0511246	SOX2.p2	CR625247|EWSR1|2130|Ewing sarcoma breakpoint region 1	X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604952|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR608375|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1	CR604639|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1	AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1	BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1	AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1	CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1
hg18_v1_chr11_-_7775064_7775095	0.0510199	SOX2.p2	AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2
hg18_v1_chr12_+_26096757_26096763	0.0510161	SOX2.p2	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
hg18_v1_chr1_-_201422450_201422458	0.0509744	SOX2.p2	AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr20_-_1548589_1548688	0.0508695	SOX2.p2	BC131747|SIRPB1|10326|signal-regulatory protein beta 1	Y10376|SIRPB1|10326|signal-regulatory protein beta 1	BC025286|SIRPB1|10326|signal-regulatory protein beta 1	BC075835|SIRPB1|10326|signal-regulatory protein beta 1	AK289866|SIRPB1|10326|signal-regulatory protein beta 1	BX537992|SIRPB1|10326|signal-regulatory protein beta 1	NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1	NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1	NM_006065|SIRPB1|10326|signal-regulatory protein beta 1
hg18_v1_chr2_-_40532651_40532802	0.0508679	SOX2.p2	Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1
hg18_v1_chr13_-_23369124_23369193	0.0507619	SOX2.p2	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B	BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B
hg18_v1_chr14_+_23610582_23610637	0.0506765	SOX2.p2	AK314182|CPNE6|9362|copine VI (neuronal)	BC018046|CPNE6|9362|copine VI (neuronal)	AB009288|CPNE6|9362|copine VI (neuronal)	NM_006032|CPNE6|9362|copine VI (neuronal)	AK294460|CPNE6|9362|copine VI (neuronal)	CR598214|CPNE6|9362|copine VI (neuronal)	AK222675|CPNE6|9362|copine VI (neuronal)	AL137688|CPNE6|9362|copine VI (neuronal)
hg18_v1_chr6_-_52736231_52736319	0.0506347	SOX2.p2	AK292602|GSTA2|2939|glutathione S-transferase alpha 2	AK313601|GSTA2|2939|glutathione S-transferase alpha 2	M16594|GSTA2|2939|glutathione S-transferase alpha 2	BC002895|GSTA2|2939|glutathione S-transferase alpha 2	NM_000846|GSTA2|2939|glutathione S-transferase alpha 2
hg18_v1_chrX_+_92815667_92815667	0.0506269	SOX2.p2	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A	NM_001171110|FAM133A|286499|family with sequence similarity 133, member A	NM_001171111|FAM133A|286499|family with sequence similarity 133, member A	NM_173698|FAM133A|286499|family with sequence similarity 133, member A
hg18_v1_chr5_-_146441184_146441246	0.050512	SOX2.p2	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta
hg18_v1_chr4_-_83771386_83771404	0.0504948	SOX2.p2	CR621269|SCD5|79966|stearoyl-CoA desaturase 5
hg18_v1_chr1_-_27871306_27871346	0.0504632	SOX2.p2	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6	NM_022872|IFI6|2537|interferon, alpha-inducible protein 6	NM_022873|IFI6|2537|interferon, alpha-inducible protein 6
hg18_v1_chr9_+_12764988_12765045	0.0504547	SOX2.p2	CR607491|C9orf150|286343|chromosome 9 open reading frame 150	NM_203403|C9orf150|286343|chromosome 9 open reading frame 150	AB073606|C9orf150|286343|chromosome 9 open reading frame 150	AK095824|C9orf150|286343|chromosome 9 open reading frame 150	BC036923|C9orf150|286343|chromosome 9 open reading frame 150
hg18_v1_chr3_+_103636548_103636566	0.0503105	SOX2.p2	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1	NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1	BC143817|ZPLD1|131368|zona pellucida-like domain containing 1
hg18_v1_chr5_-_121441805_121441860	0.0503056	SOX2.p2	S78694|LOX|4015|lysyl oxidase	AF039291|LOX|4015|lysyl oxidase	AK297709|LOX|4015|lysyl oxidase	AK298781|LOX|4015|lysyl oxidase
hg18_v1_chr1_+_183392814_183392973	0.0502296	SOX2.p2	NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)	AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg18_v1_chr13_+_36146048_36146156	0.0501195	SOX2.p2	BC036540|C13orf36|400120|chromosome 13 open reading frame 36	NM_203451|C13orf36|400120|chromosome 13 open reading frame 36	AK294236|C13orf36|400120|chromosome 13 open reading frame 36
hg18_v1_chrX_+_119268713_119268724	0.0500988	SOX2.p2	
hg18_v1_chr3_-_130373241_130373306	0.0499565	SOX2.p2	BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR596443|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR597317|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR606309|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR610184|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR614312|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	CR626515|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein
hg18_v1_chr1_-_181826292_181826381	0.0498707	SOX2.p2	BC001606|NCF2|4688|neutrophil cytosolic factor 2	NM_000433|NCF2|4688|neutrophil cytosolic factor 2	NM_001190789|NCF2|4688|neutrophil cytosolic factor 2	NM_001190794|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr2_+_169631777_169631965	0.0498436	SOX2.p2	AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9
hg18_v1_chr1_-_175400573_175400646	0.0497505	SOX2.p2	AK307820|ASTN1|460|astrotactin 1	AK295126|ASTN1|460|astrotactin 1	BC032870|ASTN1|460|astrotactin 1	BC049377|ASTN1|460|astrotactin 1	NM_004319|ASTN1|460|astrotactin 1	NM_207108|ASTN1|460|astrotactin 1
hg18_v1_chr11_+_6176951_6177029	0.0497226	SOX2.p2	BC137225|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1	NM_001005178|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1
hg18_v1_chr6_+_160103500_160103534	0.0496818	SOX2.p2	AK294273|ACAT2|39|acetyl-CoA acetyltransferase 2
hg18_v1_chr12_-_10042956_10043165	0.0496387	SOX2.p2	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B	AF124841|CLEC1B|51266|C-type lectin domain family 1, member B	AY358599|CLEC1B|51266|C-type lectin domain family 1, member B	NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B	NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B
hg18_v1_chr1_-_171905593_171905625	0.049577	SOX2.p2	AK127170|ANKRD45|339416|ankyrin repeat domain 45	BC126353|ANKRD45|339416|ankyrin repeat domain 45	BC126355|ANKRD45|339416|ankyrin repeat domain 45	NM_198493|ANKRD45|339416|ankyrin repeat domain 45
hg18_v1_chr1_+_103898844_103898844	0.0494463	SOX2.p2	NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)
hg18_v1_chr2_+_24003648_24003674	0.0494251	SOX2.p2	BC037901|UBXN2A|165324|UBX domain protein 2A
hg18_v1_chr4_+_53975597_53975627	0.0494186	SOX2.p2	CR606214|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr1_-_25619863_25619991	0.0493046	SOX2.p2	AB018644|RHCE|6006|Rh blood group, CcEe antigens	AB018645|RHCE|6006|Rh blood group, CcEe antigens	AB030388|RHCE|6006|Rh blood group, CcEe antigens	AB049753|RHCE|6006|Rh blood group, CcEe antigens	AF056965|RHCE|6006|Rh blood group, CcEe antigens	AF177938|RHD|6007|Rh blood group, D antigen	AM295506|RHCE|6006|Rh blood group, CcEe antigens	DQ178642|RHCE|6006|Rh blood group, CcEe antigens	DQ266353|RHCE|6006|Rh blood group, CcEe antigens	DQ266400|RHCE|6006|Rh blood group, CcEe antigens	DQ322275|RHCE|6006|Rh blood group, CcEe antigens	GU474431|RHCE|6006|Rh blood group, CcEe antigens	GU563377|RHCE|6006|Rh blood group, CcEe antigens	S57967|RHCE|6006|Rh blood group, CcEe antigens	X63096|RHCE|6006|Rh blood group, CcEe antigens	X63095|RHCE|6006|Rh blood group, CcEe antigens	AY603478|RHCE|6006|Rh blood group, CcEe antigens	X63098|RHCE|6006|Rh blood group, CcEe antigens	Z97026|RHD|6007|Rh blood group, D antigen	BC075081|RHCE|6006|Rh blood group, CcEe antigens	M34015|RHCE|6006|Rh blood group, CcEe antigens	AF312679|RHD|6007|Rh blood group, D antigen	AF510065|RHCE|6006|Rh blood group, CcEe antigens	AF510066|RHCE|6006|Rh blood group, CcEe antigens	AF510067|RHCE|6006|Rh blood group, CcEe antigens	AF510068|RHCE|6006|Rh blood group, CcEe antigens	X54534|RHCE|6006|Rh blood group, CcEe antigens	NM_020485|RHCE|6006|Rh blood group, CcEe antigens	NM_138616|RHCE|6006|Rh blood group, CcEe antigens	NM_138617|RHCE|6006|Rh blood group, CcEe antigens	NM_138618|RHCE|6006|Rh blood group, CcEe antigens	BC139905|RHCE|6006|Rh blood group, CcEe antigens
hg18_v1_chr8_-_105670410_105670437	0.0491762	SOX2.p2	AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12	NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12
hg18_v1_chr12_-_90100679_90100707	0.0491732	SOX2.p2	CR621501|DCN|1634|decorin	CR625941|DCN|1634|decorin	CR597299|DCN|1634|decorin	CR605408|DCN|1634|decorin	CR612130|DCN|1634|decorin	CR598428|DCN|1634|decorin	CR605283|DCN|1634|decorin	CR610969|DCN|1634|decorin	CR626006|DCN|1634|decorin
hg18_v1_chrX_-_103060777_103060803	0.049135	SOX2.p2	AK026512|LOC100128594|100128594|hypothetical LOC100128594
hg18_v1_chr9_-_21984414_21984622	0.0490768	SOX2.p2	S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	CR604976|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr14_-_105657378_105657714	0.0490759	SOX2.p2	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31
hg18_v1_chr2_-_108517028_108517127	0.0490057	SOX2.p2	BC004487|FLJ38668|644903|hypothetical LOC644903	AK095987|FLJ38668|644903|hypothetical LOC644903
hg18_v1_chr7_+_38984133_38984133	0.0488846	SOX2.p2	NM_001166018|POU6F2|11281|POU class 6 homeobox 2	NM_007252|POU6F2|11281|POU class 6 homeobox 2
hg18_v1_chr9_+_132990760_132990830	0.0488032	SOX2.p2	BC105998|NUP214|8021|nucleoporin 214kDa	AK307573|NUP214|8021|nucleoporin 214kDa	NM_005085|NUP214|8021|nucleoporin 214kDa	AL832609|NUP214|8021|nucleoporin 214kDa	X64228|NUP214|8021|nucleoporin 214kDa	BC045620|NUP214|8021|nucleoporin 214kDa	BC012500|NUP214|8021|nucleoporin 214kDa
hg18_v1_chr2_+_61146866_61146866	0.0487106	SOX2.p2	BC070104|KIAA1841|84542|KIAA1841	NM_032506|KIAA1841|84542|KIAA1841
hg18_v1_chr14_+_38653177_38653260	0.0487058	SOX2.p2	AF027150|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_001009182|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_001009183|SIP1|8487|survival of motor neuron protein interacting protein 1	NM_003616|SIP1|8487|survival of motor neuron protein interacting protein 1	BC028095|SIP1|8487|survival of motor neuron protein interacting protein 1	BC104968|SIP1|8487|survival of motor neuron protein interacting protein 1	AK313947|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037701|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037702|SIP1|8487|survival of motor neuron protein interacting protein 1	AB037703|SIP1|8487|survival of motor neuron protein interacting protein 1
hg18_v1_chr12_-_129212720_129212898	0.048681	SOX2.p2	AK056047|FLJ31485|440119|hypothetical LOC440119
hg18_v1_chr6_-_91063301_91063365	0.0485672	SOX2.p2	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2	NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg18_v1_chr11_-_57752923_57752965	0.0484374	SOX2.p2	BC140731|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1	NM_001004471|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1
hg18_v1_chr3_+_137224266_137224350	0.0483481	SOX2.p2	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha
hg18_v1_chr5_-_150264622_150264657	0.0482364	SOX2.p2	CR600345|ZNF300|91975|zinc finger protein 300	AK300528|ZNF300|91975|zinc finger protein 300
hg18_v1_chr12_+_97433536_97433540	0.0482261	SOX2.p2	U09087|TMPO|7112|thymopoietin	U09088|TMPO|7112|thymopoietin	AF070631|TMPO|7112|thymopoietin
hg18_v1_chr14_-_37795001_37795066	0.0481882	SOX2.p2	CR594082|CLEC14A|161198|C-type lectin domain family 14, member A	AY573061|CLEC14A|161198|C-type lectin domain family 14, member A	BC031567|CLEC14A|161198|C-type lectin domain family 14, member A	AY606132|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr6_+_123359076_123359088	0.0479033	SOX2.p2	AK295158|CLVS2|134829|clavesin 2
hg18_v1_chr5_-_36337756_36337767	0.0478551	SOX2.p2	BC017951|RANBP3L|202151|RAN binding protein 3-like	AK058151|RANBP3L|202151|RAN binding protein 3-like	AK302947|RANBP3L|202151|RAN binding protein 3-like	BC047660|RANBP3L|202151|RAN binding protein 3-like	NM_001161429|RANBP3L|202151|RAN binding protein 3-like	NM_145000|RANBP3L|202151|RAN binding protein 3-like
hg18_v1_chr2_+_88148413_88148516	0.0478419	SOX2.p2	BC126191|SMYD1|150572|SET and MYND domain containing 1	NM_198274|SMYD1|150572|SET and MYND domain containing 1	AK091724|SMYD1|150572|SET and MYND domain containing 1	BC017915|SMYD1|150572|SET and MYND domain containing 1	BX647878|SMYD1|150572|SET and MYND domain containing 1	AL832035|SMYD1|150572|SET and MYND domain containing 1	EU831908|SMYD1|150572|SET and MYND domain containing 1	EU832002|SMYD1|150572|SET and MYND domain containing 1	AY518933|SMYD1|150572|SET and MYND domain containing 1
hg18_v1_chr3_+_38238080_38238094	0.04778	SOX2.p2	AF087893|OXSR1|9943|oxidative-stress responsive 1
hg18_v1_chr7_-_23476497_23476549	0.0475964	SOX2.p2	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3
hg18_v1_chr3_-_47180417_47180470	0.0475612	SOX2.p2	AK131371|SETD2|29072|SET domain containing 2	NM_014159|SETD2|29072|SET domain containing 2
hg18_v1_chr11_+_113280727_113280865	0.0474185	SOX2.p2	AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B	NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B
hg18_v1_chr2_+_48698440_48698518	0.0474059	SOX2.p2	AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like	NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like	BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like	AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like	AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like	DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like	BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like
hg18_v1_chr2_-_189752575_189752849	0.0473867	SOX2.p2	J04478|COL5A2|1290|collagen, type V, alpha 2	Y14690|COL5A2|1290|collagen, type V, alpha 2	AB209045|COL5A2|1290|collagen, type V, alpha 2	BC086874|COL5A2|1290|collagen, type V, alpha 2	AK297936|COL5A2|1290|collagen, type V, alpha 2	AK300146|COL5A2|1290|collagen, type V, alpha 2	NM_000393|COL5A2|1290|collagen, type V, alpha 2
hg18_v1_chr12_-_100979923_100980060	0.0473517	SOX2.p2	AK314970|CCDC53|51019|coiled-coil domain containing 53	AK223339|CCDC53|51019|coiled-coil domain containing 53	AF151874|CCDC53|51019|coiled-coil domain containing 53	AF155655|CCDC53|51019|coiled-coil domain containing 53	CR621235|CCDC53|51019|coiled-coil domain containing 53	CR623956|CCDC53|51019|coiled-coil domain containing 53	NM_016053|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr12_-_54965996_54966141	0.0472764	SOX2.p2	BC000105|CS|1431|citrate synthase	AF147410|CS|1431|citrate synthase	AK293263|CS|1431|citrate synthase
hg18_v1_chr2_+_169465995_169466046	0.0472461	SOX2.p2	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2	CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2
hg18_v1_chr12_+_52132353_52132414	0.0472275	SOX2.p2	AK292141|PCBP2|5094|poly(rC) binding protein 2	CR602496|PCBP2|5094|poly(rC) binding protein 2	BC001155|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr16_-_56038771_56038940	0.0472257	SOX2.p2	CR590040|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR613398|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625987|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR624651|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605182|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR610264|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR604417|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR623944|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR597348|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR605775|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR622197|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	CR625926|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1	BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1
hg18_v1_chrX_+_69270489_69270550	0.047184	SOX2.p2	Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR591988|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR603491|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR613988|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR596975|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR606253|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR597909|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR597289|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR606503|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	CR593604|IGBP1|3476|immunoglobulin (CD79A) binding protein 1
hg18_v1_chr6_-_32268615_32268693	0.0471759	SOX2.p2	CR623296|GPSM3|63940|G-protein signaling modulator 3	CR604341|GPSM3|63940|G-protein signaling modulator 3	AJ243938|GPSM3|63940|G-protein signaling modulator 3	AK313922|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr14_-_22634134_22634174	0.0471128	SOX2.p2	AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1	AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1
hg18_v1_chr11_+_119701047_119701047	0.0470636	SOX2.p2	AK128040|TMEM136|219902|transmembrane protein 136	NM_001198670|TMEM136|219902|transmembrane protein 136	NM_001198671|TMEM136|219902|transmembrane protein 136	NM_001198672|TMEM136|219902|transmembrane protein 136	NM_001198673|TMEM136|219902|transmembrane protein 136	NM_001198674|TMEM136|219902|transmembrane protein 136	NM_001198675|TMEM136|219902|transmembrane protein 136	NM_174926|TMEM136|219902|transmembrane protein 136
hg18_v1_chr5_-_58607673_58607701	0.0470473	SOX2.p2	AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific
hg18_v1_chr5_+_132456293_132456311	0.0470239	SOX2.p2	AK315887|HSPA4|3308|heat shock 70kDa protein 4	AK311316|HSPA4|3308|heat shock 70kDa protein 4
hg18_v1_chr3_-_101316038_101316046	0.0469988	SOX2.p2	BC017987|FILIP1L|11259|filamin A interacting protein 1-like	NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like	NM_182909|FILIP1L|11259|filamin A interacting protein 1-like	AF329092|FILIP1L|11259|filamin A interacting protein 1-like
hg18_v1_chr2_-_39517795_39517815	0.0469566	SOX2.p2	BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3
hg18_v1_chr4_-_120462705_120462763	0.0469203	SOX2.p2	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal	BC069617|FABP2|2169|fatty acid binding protein 2, intestinal	BC069466|FABP2|2169|fatty acid binding protein 2, intestinal	BC069625|FABP2|2169|fatty acid binding protein 2, intestinal	BC069637|FABP2|2169|fatty acid binding protein 2, intestinal	BC111791|FABP2|2169|fatty acid binding protein 2, intestinal	NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal
hg18_v1_chr14_+_80491461_80491777	0.0468069	SOX2.p2	BC024205|TSHR|7253|thyroid stimulating hormone receptor	NM_000369|TSHR|7253|thyroid stimulating hormone receptor	NM_001018036|TSHR|7253|thyroid stimulating hormone receptor	NM_001142626|TSHR|7253|thyroid stimulating hormone receptor	M31774|TSHR|7253|thyroid stimulating hormone receptor	BC108653|TSHR|7253|thyroid stimulating hormone receptor	BC009237|TSHR|7253|thyroid stimulating hormone receptor	M73747|TSHR|7253|thyroid stimulating hormone receptor	M32215|TSHR|7253|thyroid stimulating hormone receptor	BC063613|TSHR|7253|thyroid stimulating hormone receptor	AB209207|TSHR|7253|thyroid stimulating hormone receptor	BC120972|TSHR|7253|thyroid stimulating hormone receptor	BC120973|TSHR|7253|thyroid stimulating hormone receptor	BC127628|TSHR|7253|thyroid stimulating hormone receptor	BC127629|TSHR|7253|thyroid stimulating hormone receptor	BC141970|TSHR|7253|thyroid stimulating hormone receptor	S49816|TSHR|7253|thyroid stimulating hormone receptor	AY429111|TSHR|7253|thyroid stimulating hormone receptor	S45272|TSHR|7253|thyroid stimulating hormone receptor
hg18_v1_chr8_+_18072250_18072250	0.0467747	SOX2.p2	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)
hg18_v1_chr12_-_107551783_107551800	0.0466985	SOX2.p2	AK127638|SELPLG|6404|selectin P ligand	AK098315|SELPLG|6404|selectin P ligand	NM_003006|SELPLG|6404|selectin P ligand
hg18_v1_chr17_+_43480723_43480723	0.0466715	SOX2.p2	AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr5_-_22889192_22889215	0.0465434	SOX2.p2	BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)
hg18_v1_chr8_-_28403652_28403745	0.0464452	SOX2.p2	BC074986|FBXO16|157574|F-box protein 16	AF453435|FBXO16|157574|F-box protein 16	BC102026|FBXO16|157574|F-box protein 16	BC102027|FBXO16|157574|F-box protein 16	BC102028|FBXO16|157574|F-box protein 16	AK098243|ZNF395|55893|zinc finger protein 395	NM_172366|FBXO16|157574|F-box protein 16	CR590799|FBXO16|157574|F-box protein 16
hg18_v1_chr2_+_219354948_219355323	0.0464026	SOX2.p2	X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR623283|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	CR590744|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr12_-_67643286_67643287	0.0463433	SOX2.p2	J04970|CPM|1368|carboxypeptidase M	NM_001874|CPM|1368|carboxypeptidase M	AK127859|CPM|1368|carboxypeptidase M
hg18_v1_chr3_-_126325132_126325158	0.0462828	SOX2.p2	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	CR596399|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8
hg18_v1_chr3_+_139200347_139200391	0.0462777	SOX2.p2	AK098474|CLDN18|51208|claudin 18	NM_001002026|CLDN18|51208|claudin 18	AF349452|CLDN18|51208|claudin 18
hg18_v1_chr12_-_100979869_100979891	0.0462037	SOX2.p2	CR457171|CCDC53|51019|coiled-coil domain containing 53	CR609797|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr5_-_121441866_121441878	0.0461124	SOX2.p2	BC089436|LOX|4015|lysyl oxidase	AK312269|LOX|4015|lysyl oxidase
hg18_v1_chr10_-_32675848_32676089	0.0460469	SOX2.p2	AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)
hg18_v1_chr15_+_49831030_49831200	0.046028	SOX2.p2	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)	NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)	BC036184|TMOD2|29767|tropomodulin 2 (neuronal)	BC064961|TMOD2|29767|tropomodulin 2 (neuronal)	AF177169|TMOD2|29767|tropomodulin 2 (neuronal)	AK293823|TMOD2|29767|tropomodulin 2 (neuronal)	AK292733|TMOD2|29767|tropomodulin 2 (neuronal)
hg18_v1_chr14_+_95899541_95899594	0.0459623	SOX2.p2	CR608981|C14orf129|51527|chromosome 14 open reading frame 129
hg18_v1_chr11_-_55128424_55128449	0.0459045	SOX2.p2	NM_001004700|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11	BC140727|OR4C11|219429|olfactory receptor, family 4, subfamily C, member 11
hg18_v1_chr2_-_202215593_202215684	0.0458113	SOX2.p2	AK090601|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	BC029611|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4	NM_152388|ALS2CR4|65062|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4
hg18_v1_chr6_+_42639714_42639742	0.0458043	SOX2.p2	NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2
hg18_v1_chr5_-_121842680_121842684	0.0457719	SOX2.p2	
hg18_v1_chr11_-_27679617_27679755	0.0457674	SOX2.p2	CR616691|BDNF|627|brain-derived neurotrophic factor	AB038672|BDNF|627|brain-derived neurotrophic factor	AY054397|BDNF|627|brain-derived neurotrophic factor	BC029795|BDNF|627|brain-derived neurotrophic factor	EF674521|BDNF|627|brain-derived neurotrophic factor	NM_170733|BDNF|627|brain-derived neurotrophic factor
hg18_v1_chr3_-_14964620_14964663	0.0457638	SOX2.p2	
hg18_v1_chr14_-_59167067_59167127	0.0457145	SOX2.p2	CR599775|RTN1|6252|reticulon 1	CR609190|RTN1|6252|reticulon 1	BC000314|RTN1|6252|reticulon 1	BC003003|RTN1|6252|reticulon 1	CR591857|RTN1|6252|reticulon 1	CR590533|RTN1|6252|reticulon 1	CR591277|RTN1|6252|reticulon 1	CR595047|RTN1|6252|reticulon 1	CR620778|RTN1|6252|reticulon 1	CR622144|RTN1|6252|reticulon 1	AK297492|RTN1|6252|reticulon 1	CR591505|RTN1|6252|reticulon 1	CR597727|RTN1|6252|reticulon 1	CR598114|RTN1|6252|reticulon 1	CR598721|RTN1|6252|reticulon 1	CR606033|RTN1|6252|reticulon 1	CR609607|RTN1|6252|reticulon 1	CR616369|RTN1|6252|reticulon 1	CR616883|RTN1|6252|reticulon 1	CR618902|RTN1|6252|reticulon 1	CR596045|RTN1|6252|reticulon 1	CR614370|RTN1|6252|reticulon 1	CR616915|RTN1|6252|reticulon 1	CR590119|RTN1|6252|reticulon 1	CR602238|RTN1|6252|reticulon 1	CR602429|RTN1|6252|reticulon 1	CR619313|RTN1|6252|reticulon 1
hg18_v1_chr5_+_148711419_148711529	0.0456938	SOX2.p2	AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)
hg18_v1_chr1_-_75854281_75854387	0.0456927	SOX2.p2	AK299573|SLC44A5|204962|solute carrier family 44, member 5
hg18_v1_chr17_+_58981550_58981566	0.0456753	SOX2.p2	AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7	NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr22_-_34566276_34566297	0.0456732	SOX2.p2	CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2
hg18_v1_chr6_+_132915522_132915524	0.0456538	SOX2.p2	AY183468|TAAR8|83551|trace amine associated receptor 8	BC069166|TAAR8|83551|trace amine associated receptor 8	NM_053278|TAAR8|83551|trace amine associated receptor 8
hg18_v1_chr4_+_72078255_72078416	0.0454532	SOX2.p2	M60527|DCK|1633|deoxycytidine kinase	BC114617|DCK|1633|deoxycytidine kinase	BT019941|DCK|1633|deoxycytidine kinase	BT019942|DCK|1633|deoxycytidine kinase	CR536527|DCK|1633|deoxycytidine kinase	CR541876|DCK|1633|deoxycytidine kinase
hg18_v1_chr3_+_57718067_57718418	0.0454356	SOX2.p2	AY358410|SLMAP|7871|sarcolemma associated protein	NM_007159|SLMAP|7871|sarcolemma associated protein	AK124200|SLMAP|7871|sarcolemma associated protein	BC114627|SLMAP|7871|sarcolemma associated protein	BC115701|SLMAP|7871|sarcolemma associated protein
hg18_v1_chr15_+_20444124_20444136	0.0453677	SOX2.p2	NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr1_-_152847301_152847347	0.0452158	SOX2.p2	AK304153|ADAR|103|adenosine deaminase, RNA-specific	X79449|ADAR|103|adenosine deaminase, RNA-specific	NM_001111|ADAR|103|adenosine deaminase, RNA-specific	NM_015840|ADAR|103|adenosine deaminase, RNA-specific	NM_015841|ADAR|103|adenosine deaminase, RNA-specific
hg18_v1_chr11_-_5662762_5662917	0.0451411	SOX2.p2	BC021258|TRIM5|85363|tripartite motif containing 5	CR616862|TRIM5|85363|tripartite motif containing 5	BX647152|TRIM5|85363|tripartite motif containing 5	AK027593|TRIM5|85363|tripartite motif containing 5	NM_033034|TRIM5|85363|tripartite motif containing 5	NM_033092|TRIM5|85363|tripartite motif containing 5	NM_033093|TRIM5|85363|tripartite motif containing 5
hg18_v1_chr4_-_87500201_87500239	0.0451166	SOX2.p2	BC022492|MAPK10|5602|mitogen-activated protein kinase 10	BC035057|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr4_-_168392266_168392292	0.0450603	SOX2.p2	BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr20_-_42561725_42561851	0.044953	SOX2.p2	
hg18_v1_chr2_-_161058120_161058290	0.0449133	SOX2.p2	D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1
hg18_v1_chr12_+_52132176_52132244	0.0448903	SOX2.p2	CR603638|PCBP2|5094|poly(rC) binding protein 2	BC035420|PCBP2|5094|poly(rC) binding protein 2	CR620547|PCBP2|5094|poly(rC) binding protein 2
hg18_v1_chr1_-_201422436_201422448	0.0447834	SOX2.p2	BC039132|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	M80927|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	CR602274|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr15_-_68177280_68177282	0.0447282	SOX2.p2	BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr10_+_123913094_123913348	0.0446824	SOX2.p2	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2	NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2	BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2	AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr1_-_143708467_143708467	0.0446126	SOX2.p2	NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein
hg18_v1_chr4_+_47181987_47182188	0.0446098	SOX2.p2	BC057839|ATP10D|57205|ATPase, class V, type 10D	AJ441078|ATP10D|57205|ATPase, class V, type 10D	NM_020453|ATP10D|57205|ATPase, class V, type 10D	BC131535|ATP10D|57205|ATPase, class V, type 10D
hg18_v1_chr10_+_122600843_122600927	0.0446087	SOX2.p2	BC040469|WDR11|55717|WD repeat domain 11	AB037772|WDR11|55717|WD repeat domain 11	AK299524|WDR11|55717|WD repeat domain 11	AF320223|WDR11|55717|WD repeat domain 11	AK301761|WDR11|55717|WD repeat domain 11	BC071564|WDR11|55717|WD repeat domain 11	AK315145|WDR11|55717|WD repeat domain 11
hg18_v1_chr1_+_148305965_148306062	0.0445988	SOX2.p2	NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg18_v1_chr4_-_155631861_155632004	0.0445392	SOX2.p2	AY354498|DCHS2|54798|dachsous 2 (Drosophila)	BC140919|DCHS2|54798|dachsous 2 (Drosophila)
hg18_v1_chr3_-_56673113_56673113	0.044481	SOX2.p2	BC029354|C3orf63|23272|chromosome 3 open reading frame 63	NM_015224|C3orf63|23272|chromosome 3 open reading frame 63
hg18_v1_chr5_+_76418545_76418662	0.0444611	SOX2.p2	CR597892|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr6_-_10939095_10939097	0.0444559	SOX2.p2	AF505623|MAK|4117|male germ cell-associated kinase	NM_005906|MAK|4117|male germ cell-associated kinase	BC039825|MAK|4117|male germ cell-associated kinase
hg18_v1_chr3_-_171013145_171013413	0.0443438	SOX2.p2	AK293661|LRRC34|151827|leucine rich repeat containing 34	AK095125|LRRC34|151827|leucine rich repeat containing 34	NM_001172779|LRRC34|151827|leucine rich repeat containing 34	NM_001172780|LRRC34|151827|leucine rich repeat containing 34	NM_153353|LRRC34|151827|leucine rich repeat containing 34	CR606238|LRRC34|151827|leucine rich repeat containing 34
hg18_v1_chrX_-_110400321_110400399	0.0443421	SOX2.p2	AF029232|CAPN6|827|calpain 6	AK312701|CAPN6|827|calpain 6
hg18_v1_chr12_-_100979893_100979921	0.0443125	SOX2.p2	BC010889|CCDC53|51019|coiled-coil domain containing 53
hg18_v1_chr2_+_86521781_86521781	0.0442921	SOX2.p2	NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A
hg18_v1_chr2_-_175578156_175578415	0.0442462	SOX2.p2	AK289941|CHN1|1123|chimerin (chimaerin) 1	BC011393|CHN1|1123|chimerin (chimaerin) 1	AB209788|CHN1|1123|chimerin (chimaerin) 1	AK300890|CHN1|1123|chimerin (chimaerin) 1	NM_001025201|CHN1|1123|chimerin (chimaerin) 1	NM_001822|CHN1|1123|chimerin (chimaerin) 1
hg18_v1_chr17_+_26183074_26183148	0.0442369	SOX2.p2	AL832103|ATAD5|79915|ATPase family, AAA domain containing 5	BC015051|ATAD5|79915|ATPase family, AAA domain containing 5	AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5	AY557611|ATAD5|79915|ATPase family, AAA domain containing 5	NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5
hg18_v1_chr3_+_197951121_197951124	0.0441957	SOX2.p2	NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2
hg18_v1_chr9_+_116943917_116943917	0.0441877	SOX2.p2	AB022761|DEC1|50514|deleted in esophageal cancer 1	NM_017418|DEC1|50514|deleted in esophageal cancer 1
hg18_v1_chrX_+_135057202_135057397	0.0441233	SOX2.p2	NM_001159702|FHL1|2273|four and a half LIM domains 1	NM_001159703|FHL1|2273|four and a half LIM domains 1	NM_001449|FHL1|2273|four and a half LIM domains 1	BC010998|FHL1|2273|four and a half LIM domains 1	AK297124|FHL1|2273|four and a half LIM domains 1	AK091702|FHL1|2273|four and a half LIM domains 1	AK300966|FHL1|2273|four and a half LIM domains 1	AK094024|FHL1|2273|four and a half LIM domains 1
hg18_v1_chr8_+_9949207_9949371	0.0440899	SOX2.p2	AJ242973|MSRA|4482|methionine sulfoxide reductase A	BC054033|MSRA|4482|methionine sulfoxide reductase A	NM_001135670|MSRA|4482|methionine sulfoxide reductase A	NM_012331|MSRA|4482|methionine sulfoxide reductase A	AF086925|MSRA|4482|methionine sulfoxide reductase A	AF183420|MSRA|4482|methionine sulfoxide reductase A
hg18_v1_chr17_-_53651964_53651964	0.044049	SOX2.p2	AK310815|MKS1|54903|Meckel syndrome, type 1	NM_001165927|MKS1|54903|Meckel syndrome, type 1
hg18_v1_chr5_+_121325554_121325626	0.0438766	SOX2.p2	AK058015|SRFBP1|153443|serum response factor binding protein 1	NM_152546|SRFBP1|153443|serum response factor binding protein 1	BC031222|SRFBP1|153443|serum response factor binding protein 1	AY611630|SRFBP1|153443|serum response factor binding protein 1
hg18_v1_chr5_+_140546839_140547077	0.0438519	SOX2.p2	AF152502|PCDHB9|56127|protocadherin beta 9	AF217749|PCDHB9|56127|protocadherin beta 9	BC100672|PCDHB9|56127|protocadherin beta 9	BC105636|PCDHB9|56127|protocadherin beta 9	BC105640|PCDHB9|56127|protocadherin beta 9	NM_019119|PCDHB9|56127|protocadherin beta 9	BC103494|PCDHB9|56127|protocadherin beta 9
hg18_v1_chrX_-_138742050_138742112	0.0437949	SOX2.p2	BC132728|ATP11C|286410|ATPase, class VI, type 11C	BC132730|ATP11C|286410|ATPase, class VI, type 11C	AJ580093|ATP11C|286410|ATPase, class VI, type 11C	AJ580094|ATP11C|286410|ATPase, class VI, type 11C	NM_001010986|ATP11C|286410|ATPase, class VI, type 11C	NM_173694|ATP11C|286410|ATPase, class VI, type 11C
hg18_v1_chr10_+_118295417_118295594	0.0437831	SOX2.p2	NM_000936|PNLIP|5406|pancreatic lipase	AK313941|PNLIP|5406|pancreatic lipase	J05125|PNLIP|5406|pancreatic lipase	BC007025|PNLIP|5406|pancreatic lipase	BC014309|PNLIP|5406|pancreatic lipase	M93285|PNLIP|5406|pancreatic lipase
hg18_v1_chr17_+_43480674_43480722	0.043765	SOX2.p2	NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1
hg18_v1_chr15_-_48434896_48434896	0.0437541	SOX2.p2	NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr2_-_232034638_232034709	0.0437487	SOX2.p2	AK001314|NCL|4691|nucleolin
hg18_v1_chr3_+_25444837_25444905	0.0437346	SOX2.p2	BC030234|RARB|5915|retinoic acid receptor, beta	NM_000965|RARB|5915|retinoic acid receptor, beta	X07282|RARB|5915|retinoic acid receptor, beta	Y00291|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr1_+_12958129_12958135	0.0437249	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22
hg18_v1_chr14_+_28311740_28311753	0.0436725	SOX2.p2	BX248251|C14orf23|387978|chromosome 14 open reading frame 23
hg18_v1_chr2_-_169927258_169927393	0.0436447	SOX2.p2	U33837|LRP2|4036|low density lipoprotein receptor-related protein 2	AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2	NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2
hg18_v1_chr3_-_71262426_71262435	0.0435889	SOX2.p2	AK297649|FOXP1|27086|forkhead box P1	BX647682|FOXP1|27086|forkhead box P1
hg18_v1_chr20_+_2792688_2792879	0.0435611	SOX2.p2	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)	M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg18_v1_chr18_+_647461_647632	0.0433312	SOX2.p2	CR601528|TYMS|7298|thymidylate synthetase	NM_001071|TYMS|7298|thymidylate synthetase	BC083512|TYMS|7298|thymidylate synthetase	AK223372|TYMS|7298|thymidylate synthetase	BC013919|TYMS|7298|thymidylate synthetase
hg18_v1_chr3_+_39346200_39346298	0.0432184	SOX2.p2	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8	NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8	AF005210|CCR8|1237|chemokine (C-C motif) receptor 8	BC107152|CCR8|1237|chemokine (C-C motif) receptor 8	BC107159|CCR8|1237|chemokine (C-C motif) receptor 8	D49919|CCR8|1237|chemokine (C-C motif) receptor 8	BC074743|CCR8|1237|chemokine (C-C motif) receptor 8
hg18_v1_chr17_-_60088773_60088881	0.0431725	SOX2.p2	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr5_+_140235114_140235241	0.0430716	SOX2.p2	NM_018903|PCDHA12|56137|protocadherin alpha 12	NM_031864|PCDHA12|56137|protocadherin alpha 12	BC112280|PCDHA12|56137|protocadherin alpha 12	BC113372|PCDHA12|56137|protocadherin alpha 12	AF152308|PCDHA12|56137|protocadherin alpha 12	AF152477|PCDHA12|56137|protocadherin alpha 12
hg18_v1_chr14_+_51397166_51397206	0.0429881	SOX2.p2	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2
hg18_v1_chr13_+_107753764_107753872	0.0429618	SOX2.p2	
hg18_v1_chr14_-_19843969_19843994	0.0428576	SOX2.p2	AK074553|TTC5|91875|tetratricopeptide repeat domain 5	NM_138376|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr11_-_5279750_5279751	0.0428354	SOX2.p2	BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4	NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4
hg18_v1_chr3_-_168674502_168674527	0.042821	SOX2.p2	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2	AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2
hg18_v1_chr7_-_130891861_130891945	0.0426967	SOX2.p2	BC042466|PODXL|5420|podocalyxin-like	U97519|PODXL|5420|podocalyxin-like	AK223573|PODXL|5420|podocalyxin-like	AK055816|PODXL|5420|podocalyxin-like	NM_001018111|PODXL|5420|podocalyxin-like	NM_005397|PODXL|5420|podocalyxin-like
hg18_v1_chr6_+_148705421_148705491	0.0426935	SOX2.p2	AK025495|SASH1|23328|SAM and SH3 domain containing 1	NM_015278|SASH1|23328|SAM and SH3 domain containing 1
hg18_v1_chr17_+_73721924_73722060	0.0426288	SOX2.p2	AK223428|BIRC5|332|baculoviral IAP repeat containing 5	CR593999|BIRC5|332|baculoviral IAP repeat containing 5	BC000784|BIRC5|332|baculoviral IAP repeat containing 5	BC034148|BIRC5|332|baculoviral IAP repeat containing 5	AY927772|BIRC5|332|baculoviral IAP repeat containing 5	CR602197|BIRC5|332|baculoviral IAP repeat containing 5	CR603892|BIRC5|332|baculoviral IAP repeat containing 5	CR619419|BIRC5|332|baculoviral IAP repeat containing 5	BC008718|BIRC5|332|baculoviral IAP repeat containing 5	CR624931|BIRC5|332|baculoviral IAP repeat containing 5	AB028869|BIRC5|332|baculoviral IAP repeat containing 5	AF077350|BIRC5|332|baculoviral IAP repeat containing 5	AK311917|BIRC5|332|baculoviral IAP repeat containing 5	CR605755|BIRC5|332|baculoviral IAP repeat containing 5	BC065497|BIRC5|332|baculoviral IAP repeat containing 5	CR592187|BIRC5|332|baculoviral IAP repeat containing 5	AM393128|BIRC5|332|baculoviral IAP repeat containing 5	AB154416|BIRC5|332|baculoviral IAP repeat containing 5	AY830084|BIRC5|332|baculoviral IAP repeat containing 5	CR541740|BIRC5|332|baculoviral IAP repeat containing 5	DQ227257|BIRC5|332|baculoviral IAP repeat containing 5	DQ310375|BIRC5|332|baculoviral IAP repeat containing 5	DQ310376|BIRC5|332|baculoviral IAP repeat containing 5	DQ310377|BIRC5|332|baculoviral IAP repeat containing 5	DQ310378|BIRC5|332|baculoviral IAP repeat containing 5	DQ310379|BIRC5|332|baculoviral IAP repeat containing 5	DQ508249|BIRC5|332|baculoviral IAP repeat containing 5	DQ508245|BIRC5|332|baculoviral IAP repeat containing 5	DQ508246|BIRC5|332|baculoviral IAP repeat containing 5	DQ508247|BIRC5|332|baculoviral IAP repeat containing 5	DQ508248|BIRC5|332|baculoviral IAP repeat containing 5
hg18_v1_chr16_+_26985719_26985778	0.0425389	SOX2.p2	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82	BC031257|C16orf82|162083|chromosome 16 open reading frame 82	AK311574|C16orf82|162083|chromosome 16 open reading frame 82
hg18_v1_chr4_+_75242671_75242788	0.0424721	SOX2.p2	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
hg18_v1_chr5_+_170221441_170221577	0.0424666	SOX2.p2	AK298785|RANBP17|64901|RAN binding protein 17	AK315159|RANBP17|64901|RAN binding protein 17
hg18_v1_chr3_-_61703850_61703852	0.0423777	SOX2.p2	
hg18_v1_chr10_+_80743769_80743922	0.0422377	SOX2.p2	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1	AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1
hg18_v1_chr7_+_153215316_153215351	0.04223	SOX2.p2	BX647966|DPP6|1804|dipeptidyl-peptidase 6	NM_001039350|DPP6|1804|dipeptidyl-peptidase 6
hg18_v1_chr1_+_25537372_25537471	0.0421371	SOX2.p2	CR596941|TMEM50A|23585|transmembrane protein 50A	AK311092|TMEM50A|23585|transmembrane protein 50A	AF087880|TMEM50A|23585|transmembrane protein 50A	AL136627|TMEM50A|23585|transmembrane protein 50A	NM_014313|TMEM50A|23585|transmembrane protein 50A	AK299180|TMEM50A|23585|transmembrane protein 50A	AK311355|TMEM50A|23585|transmembrane protein 50A	AK312588|TMEM50A|23585|transmembrane protein 50A	AY358650|TMEM50A|23585|transmembrane protein 50A	AY071927|TMEM50A|23585|transmembrane protein 50A	BC007341|TMEM50A|23585|transmembrane protein 50A	BC066908|TMEM50A|23585|transmembrane protein 50A	CR592818|TMEM50A|23585|transmembrane protein 50A	AF081282|TMEM50A|23585|transmembrane protein 50A
hg18_v1_chr15_-_62782512_62782532	0.0421114	SOX2.p2	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2	NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2
hg18_v1_chr14_-_19843918_19843965	0.0420572	SOX2.p2	CR597562|TTC5|91875|tetratricopeptide repeat domain 5	CR600482|TTC5|91875|tetratricopeptide repeat domain 5	CR610331|TTC5|91875|tetratricopeptide repeat domain 5	BX248066|TTC5|91875|tetratricopeptide repeat domain 5	BC008647|TTC5|91875|tetratricopeptide repeat domain 5	CR608059|TTC5|91875|tetratricopeptide repeat domain 5	EU832467|TTC5|91875|tetratricopeptide repeat domain 5	BC030822|TTC5|91875|tetratricopeptide repeat domain 5	BX640732|TTC5|91875|tetratricopeptide repeat domain 5	BC053538|TTC5|91875|tetratricopeptide repeat domain 5	BX648584|TTC5|91875|tetratricopeptide repeat domain 5
hg18_v1_chr4_+_88075176_88075303	0.0419764	SOX2.p2	AK296149|AFF1|4299|AF4/FMR2 family, member 1	NM_001166693|AFF1|4299|AF4/FMR2 family, member 1	AK300364|AFF1|4299|AF4/FMR2 family, member 1	BC017432|AFF1|4299|AF4/FMR2 family, member 1
hg18_v1_chr1_-_166372526_166372562	0.0419584	SOX2.p2	AK298797|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr12_-_109424260_109424327	0.0418248	SOX2.p2	BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR612363|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	CR594493|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)	BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg18_v1_chr10_+_11247449_11247455	0.0418188	SOX2.p2	AK302681|CELF2|10659|CUGBP, Elav-like family member 2	AK310038|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr3_+_194793691_194793832	0.0417958	SOX2.p2	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)	BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)	AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)
hg18_v1_chr15_+_70193652_70193652	0.0417922	SOX2.p2	AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8	NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8
hg18_v1_chr8_+_23157094_23157113	0.0417821	SOX2.p2	AK097202|CHMP7|91782|CHMP family, member 7	NM_152272|CHMP7|91782|CHMP family, member 7	BC042050|CHMP7|91782|CHMP family, member 7
hg18_v1_chr17_+_46176105_46176113	0.0417275	SOX2.p2	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)
hg18_v1_chr8_-_93099040_93099083	0.0416562	SOX2.p2	D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg18_v1_chr8_+_104452961_104453097	0.0416309	SOX2.p2	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1	NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1	AY136825|CTHRC1|115908|collagen triple helix repeat containing 1	CR596030|CTHRC1|115908|collagen triple helix repeat containing 1	CR605392|CTHRC1|115908|collagen triple helix repeat containing 1	CR594803|CTHRC1|115908|collagen triple helix repeat containing 1	CR612318|CTHRC1|115908|collagen triple helix repeat containing 1	CR592899|CTHRC1|115908|collagen triple helix repeat containing 1
hg18_v1_chr18_-_71050268_71050319	0.0415868	SOX2.p2	BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	CR610486|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr11_-_118571793_118571793	0.0415598	SOX2.p2	NM_001145018|CCDC153|283152|coiled-coil domain containing 153
hg18_v1_chr15_+_97010219_97010339	0.0414953	SOX2.p2	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor	X04434|IGF1R|3480|insulin-like growth factor 1 receptor	BC113610|IGF1R|3480|insulin-like growth factor 1 receptor	BC113612|IGF1R|3480|insulin-like growth factor 1 receptor	BC143721|IGF1R|3480|insulin-like growth factor 1 receptor	EU826611|IGF1R|3480|insulin-like growth factor 1 receptor	EU826612|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr15_+_20444140_20444149	0.041376	SOX2.p2	AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr4_+_142361523_142361550	0.0413543	SOX2.p2	AK294089|ZNF330|27309|zinc finger protein 330	AK223609|ZNF330|27309|zinc finger protein 330	AK002106|ZNF330|27309|zinc finger protein 330	AJ006591|ZNF330|27309|zinc finger protein 330
hg18_v1_chr20_-_33793286_33793437	0.0412896	SOX2.p2	L10911|RBM39|9584|RNA binding motif protein 39	BC107886|RBM39|9584|RNA binding motif protein 39	L10910|RBM39|9584|RNA binding motif protein 39	BC131543|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr15_-_68177283_68177312	0.0412265	SOX2.p2	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr5_+_38439399_38439406	0.0411742	SOX2.p2	AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	NM_182799|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains
hg18_v1_chr17_-_60088459_60088600	0.0411355	SOX2.p2	AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr6_-_108386013_108386040	0.0411343	SOX2.p2	BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr4_-_24195274_24195275	0.0411328	SOX2.p2	AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr14_-_34414603_34414603	0.0410971	SOX2.p2	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr5_-_150264696_150264737	0.0409622	SOX2.p2	AK096465|ZNF300|91975|zinc finger protein 300	NM_001172831|ZNF300|91975|zinc finger protein 300	NM_001172832|ZNF300|91975|zinc finger protein 300	NM_052860|ZNF300|91975|zinc finger protein 300
hg18_v1_chr6_+_18495559_18495734	0.0409434	SOX2.p2	AK096832|RNF144B|255488|ring finger protein 144B	NM_182757|RNF144B|255488|ring finger protein 144B	AB076367|RNF144B|255488|ring finger protein 144B	BC063311|RNF144B|255488|ring finger protein 144B	AL832329|RNF144B|255488|ring finger protein 144B
hg18_v1_chr2_+_204279624_204279664	0.0408635	SOX2.p2	BC093698|CD28|940|CD28 molecule	BC112085|CD28|940|CD28 molecule	AK292986|CD28|940|CD28 molecule	AF222341|CD28|940|CD28 molecule	AF222342|CD28|940|CD28 molecule	AF222343|CD28|940|CD28 molecule	AJ295273|CD28|940|CD28 molecule
hg18_v1_chr2_-_100088224_100088476	0.0407748	SOX2.p2	NM_001025108|AFF3|3899|AF4/FMR2 family, member 3
hg18_v1_chr10_-_91451102_91451192	0.0407736	SOX2.p2	AK097726|NBAS|51594|neuroblastoma amplified sequence
hg18_v1_chr2_+_17923404_17923467	0.0407608	SOX2.p2	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3	BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
hg18_v1_chr9_-_21984329_21984370	0.0407122	SOX2.p2	BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr17_+_24394043_24394043	0.0406402	SOX2.p2	BC008960|PIPOX|51268|pipecolic acid oxidase	NM_016518|PIPOX|51268|pipecolic acid oxidase
hg18_v1_chr8_-_124622434_124622628	0.0406322	SOX2.p2	AY059629|FBXO32|114907|F-box protein 32	AJ420108|FBXO32|114907|F-box protein 32	AK056986|FBXO32|114907|F-box protein 32	EF143260|FBXO32|114907|F-box protein 32	NM_058229|FBXO32|114907|F-box protein 32
hg18_v1_chr2_-_171998681_171998864	0.0406227	SOX2.p2	AK124092|METTL8|79828|methyltransferase like 8	BC025250|METTL8|79828|methyltransferase like 8	CR612022|METTL8|79828|methyltransferase like 8	AK024046|METTL8|79828|methyltransferase like 8
hg18_v1_chr13_-_45577144_45577211	0.0405528	SOX2.p2	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)	DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)	EU176478|CPB2|1361|carboxypeptidase B2 (plasma)	CR626525|CPB2|1361|carboxypeptidase B2 (plasma)	AK290829|CPB2|1361|carboxypeptidase B2 (plasma)	AB011969|CPB2|1361|carboxypeptidase B2 (plasma)	M75106|CPB2|1361|carboxypeptidase B2 (plasma)	BC007057|CPB2|1361|carboxypeptidase B2 (plasma)	NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)	NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)
hg18_v1_chr11_+_93501791_93501807	0.0405485	SOX2.p2	AK074897|PANX1|24145|pannexin 1	AF093239|PANX1|24145|pannexin 1
hg18_v1_chr4_+_175441402_175441469	0.0404772	SOX2.p2	NM_001040157|KIAA1712|80817|KIAA1712
hg18_v1_chr9_-_79835970_79836038	0.0404605	SOX2.p2	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide	NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide
hg18_v1_chr17_+_45703765_45703765	0.0404422	SOX2.p2	AY358204|TMEM92|162461|transmembrane protein 92	NM_001168215|TMEM92|162461|transmembrane protein 92
hg18_v1_chr1_-_58488795_58488800	0.0404374	SOX2.p2	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)	NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)
hg18_v1_chr14_-_106084519_106084523	0.0402453	SOX2.p2	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1	AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)
hg18_v1_chr5_+_179853977_179854022	0.0400864	SOX2.p2	NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chrX_+_147389825_147389935	0.0400486	SOX2.p2	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2	NM_001169123|AFF2|2334|AF4/FMR2 family, member 2	NM_001169124|AFF2|2334|AF4/FMR2 family, member 2	NM_001169125|AFF2|2334|AF4/FMR2 family, member 2	NM_002025|AFF2|2334|AF4/FMR2 family, member 2	U48436|AFF2|2334|AF4/FMR2 family, member 2	L76569|AFF2|2334|AF4/FMR2 family, member 2
hg18_v1_chr6_-_159386007_159386171	0.0400475	SOX2.p2	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein	AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein	BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein	AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein	AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein	NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein
hg18_v1_chr10_+_91488704_91488791	0.0400195	SOX2.p2	AK025628|KIF20B|9585|kinesin family member 20B
hg18_v1_chr6_+_152053323_152053425	0.0399895	SOX2.p2	NM_001122742|ESR1|2099|estrogen receptor 1	U68068|ESR1|2099|estrogen receptor 1	AK309580|ESR1|2099|estrogen receptor 1
hg18_v1_chr4_-_83570318_83570437	0.0399614	SOX2.p2	AB017019|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like	NM_031372|HNRPDL|9987|heterogeneous nuclear ribonucleoprotein D-like
hg18_v1_chr6_+_139136349_139136621	0.0398846	SOX2.p2	AY167571|CCDC28A|25901|coiled-coil domain containing 28A	CR598704|CCDC28A|25901|coiled-coil domain containing 28A	NM_015439|CCDC28A|25901|coiled-coil domain containing 28A	BC108717|CCDC28A|25901|coiled-coil domain containing 28A	AK300672|CCDC28A|25901|coiled-coil domain containing 28A	AL050197|CCDC28A|25901|coiled-coil domain containing 28A	AJ420568|CCDC28A|25901|coiled-coil domain containing 28A	CR626300|CCDC28A|25901|coiled-coil domain containing 28A	BC000758|CCDC28A|25901|coiled-coil domain containing 28A	BC004464|CCDC28A|25901|coiled-coil domain containing 28A	BC080566|CCDC28A|25901|coiled-coil domain containing 28A	BC013019|CCDC28A|25901|coiled-coil domain containing 28A	CR612663|CCDC28A|25901|coiled-coil domain containing 28A	CR626831|CCDC28A|25901|coiled-coil domain containing 28A
hg18_v1_chr8_+_126079900_126079928	0.0398589	SOX2.p2	NM_003129|SQLE|6713|squalene epoxidase	AK301792|SQLE|6713|squalene epoxidase	BX647605|SQLE|6713|squalene epoxidase
hg18_v1_chr7_+_128802719_128802719	0.0398467	SOX2.p2	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2	NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2
hg18_v1_chr1_-_79244948_79245082	0.0398013	SOX2.p2	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1
hg18_v1_chr3_-_195835298_195835497	0.039773	SOX2.p2	BC014883|TMEM44|93109|transmembrane protein 44	BC130297|TMEM44|93109|transmembrane protein 44	BC144158|TMEM44|93109|transmembrane protein 44	BC144159|TMEM44|93109|transmembrane protein 44	BC111485|TMEM44|93109|transmembrane protein 44	NM_001011655|TMEM44|93109|transmembrane protein 44	NM_001166305|TMEM44|93109|transmembrane protein 44	NM_001166306|TMEM44|93109|transmembrane protein 44	NM_138399|TMEM44|93109|transmembrane protein 44
hg18_v1_chr1_+_45789111_45789229	0.0397616	SOX2.p2	BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR598490|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616743|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR617059|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR614844|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR621968|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR613190|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR605893|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR600290|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR616472|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR604674|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	CR606043|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)
hg18_v1_chr6_-_108386000_108386011	0.0396775	SOX2.p2	AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr1_+_66570683_66570684	0.0396488	SOX2.p2	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific
hg18_v1_chr8_-_27525084_27525184	0.0395974	SOX2.p2	CR591665|CLU|1191|clusterin	NM_001171138|CLU|1191|clusterin
hg18_v1_chr3_-_196751293_196751512	0.0395923	SOX2.p2	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg18_v1_chr1_-_21373816_21373837	0.0395671	SOX2.p2	BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr11_-_10671873_10671897	0.039519	SOX2.p2	AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr6_+_90660906_90660908	0.0394517	SOX2.p2	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa	NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa
hg18_v1_chrX_+_55263515_55263570	0.0394358	SOX2.p2	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)	NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)	AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)	BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)
hg18_v1_chr2_+_149119029_149119117	0.0392537	SOX2.p2	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)	BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)
hg18_v1_chr1_+_15883425_15883637	0.0392028	SOX2.p2	AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg18_v1_chr9_+_102231616_102231616	0.0390956	SOX2.p2	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30
hg18_v1_chr11_+_82460766_82460767	0.0390925	SOX2.p2	BC031316|LOC100506233|100506233|hypothetical LOC100506233
hg18_v1_chr3_+_51837608_51837608	0.0390789	SOX2.p2	NM_001085479|IQCF3|401067|IQ motif containing F3
hg18_v1_chr12_-_119733062_119733071	0.0390617	SOX2.p2	AK074916|SPPL3|121665|signal peptide peptidase 3
hg18_v1_chr5_-_168204430_168204444	0.0390293	SOX2.p2	
hg18_v1_chr12_-_7935010_7935061	0.0389935	SOX2.p2	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14	AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14
hg18_v1_chr2_-_108972048_108972055	0.0388634	SOX2.p2	AK296936|EDAR|10913|ectodysplasin A receptor
hg18_v1_chr7_+_143043871_143043895	0.0388524	SOX2.p2	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C	AK296318|FAM115C|285966|family with sequence similarity 115, member C
hg18_v1_chr5_-_121441910_121441958	0.0388244	SOX2.p2	NM_002317|LOX|4015|lysyl oxidase
hg18_v1_chr4_+_84676414_84676796	0.038812	SOX2.p2	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9	DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9
hg18_v1_chr6_-_11340887_11340906	0.038756	SOX2.p2	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr15_+_20444155_20444160	0.0387244	SOX2.p2	AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1
hg18_v1_chr6_+_151228577_151228651	0.0386471	SOX2.p2	BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr6_-_33364727_33364775	0.0386007	SOX2.p2	CR597118|WDR46|9277|WD repeat domain 46
hg18_v1_chr9_-_124280025_124280055	0.0385771	SOX2.p2	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1	BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1
hg18_v1_chr14_-_23090606_23090714	0.0385436	SOX2.p2	BC131533|ZFHX2|85446|zinc finger homeobox 2	AB028979|ZFHX2|85446|zinc finger homeobox 2	NM_033400|ZFHX2|85446|zinc finger homeobox 2
hg18_v1_chr1_+_22650930_22650933	0.0385237	SOX2.p2	AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40	AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40	NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr2_-_1905508_1905609	0.0385111	SOX2.p2	AL133024|MYT1L|23040|myelin transcription factor 1-like
hg18_v1_chr11_+_70937113_70937351	0.0384475	SOX2.p2	NM_005553|KRTAP5-9|3846|keratin associated protein 5-9	X63755|KRTAP5-9|3846|keratin associated protein 5-9	BC101744|KRTAP5-9|3846|keratin associated protein 5-9	AB126078|KRTAP5-9|3846|keratin associated protein 5-9	BC069531|KRTAP5-9|3846|keratin associated protein 5-9
hg18_v1_chr2_+_48610796_48610862	0.0384318	SOX2.p2	AK314464|STON1|11037|stonin 1	NM_001198595|STON1|11037|stonin 1	NM_006873|STON1|11037|stonin 1	CR936807|STON1|11037|stonin 1
hg18_v1_chr12_-_106679038_106679043	0.0384075	SOX2.p2	NM_012406|PRDM4|11108|PR domain containing 4
hg18_v1_chr11_+_26972244_26972306	0.0383799	SOX2.p2	CR602973|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr1_-_206125877_206126015	0.0383282	SOX2.p2	
hg18_v1_chr4_-_24195243_24195273	0.0383119	SOX2.p2	AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr3_+_1109619_1109707	0.0383072	SOX2.p2	AK314220|CNTN6|27255|contactin 6	BC036338|CNTN6|27255|contactin 6	AB003592|CNTN6|27255|contactin 6	NM_014461|CNTN6|27255|contactin 6	BC113118|CNTN6|27255|contactin 6	AK307814|CNTN6|27255|contactin 6
hg18_v1_chr6_+_42231121_42231161	0.0382257	SOX2.p2	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)	NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)	BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)	AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)
hg18_v1_chr11_+_118394703_118394717	0.0381532	SOX2.p2	CR599720|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr10_+_29006530_29006554	0.0381221	SOX2.p2	CR592969|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)	CR616386|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)	CR598096|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)
hg18_v1_chr11_-_57173823_57173992	0.0380961	SOX2.p2	BC029228|YPEL4|219539|yippee-like 4 (Drosophila)	BC104781|YPEL4|219539|yippee-like 4 (Drosophila)	BC112119|YPEL4|219539|yippee-like 4 (Drosophila)	BC064995|YPEL4|219539|yippee-like 4 (Drosophila)	AB098738|YPEL4|219539|yippee-like 4 (Drosophila)	AK054775|YPEL4|219539|yippee-like 4 (Drosophila)	AK124577|YPEL4|219539|yippee-like 4 (Drosophila)	NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)
hg18_v1_chr20_+_35407872_35407970	0.0380902	SOX2.p2	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)
hg18_v1_chr4_-_120769275_120769428	0.0380612	SOX2.p2	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr2_-_86418143_86418346	0.0380465	SOX2.p2	AY562239|REEP1|65055|receptor accessory protein 1	CR457301|REEP1|65055|receptor accessory protein 1	AK297201|REEP1|65055|receptor accessory protein 1	BC064846|REEP1|65055|receptor accessory protein 1	AK294300|REEP1|65055|receptor accessory protein 1	AK297359|REEP1|65055|receptor accessory protein 1	AK297373|REEP1|65055|receptor accessory protein 1	AK299334|REEP1|65055|receptor accessory protein 1	AK023172|REEP1|65055|receptor accessory protein 1	NM_001164731|REEP1|65055|receptor accessory protein 1	NM_001164732|REEP1|65055|receptor accessory protein 1	NM_022912|REEP1|65055|receptor accessory protein 1
hg18_v1_chr17_-_30414789_30414871	0.0380098	SOX2.p2	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1	NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1
hg18_v1_chr11_+_114054409_114054507	0.0379942	SOX2.p2	NM_182495|FAM55B|120406|family with sequence similarity 55, member B	AK057953|FAM55B|120406|family with sequence similarity 55, member B	BC111797|FAM55B|120406|family with sequence similarity 55, member B
hg18_v1_chr11_-_40272239_40272239	0.0379413	SOX2.p2	AB046800|LRRC4C|57689|leucine rich repeat containing 4C	NM_020929|LRRC4C|57689|leucine rich repeat containing 4C
hg18_v1_chr12_-_8584658_8584825	0.0379179	SOX2.p2	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E	AY358499|CLEC4E|26253|C-type lectin domain family 4, member E	AB024718|CLEC4E|26253|C-type lectin domain family 4, member E	NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E	AK312671|CLEC4E|26253|C-type lectin domain family 4, member E
hg18_v1_chr19_+_56420181_56420198	0.0378555	SOX2.p2	BC028152|CD33|945|CD33 molecule	AK304810|CD33|945|CD33 molecule	DQ891726|CD33|945|CD33 molecule	DQ894903|CD33|945|CD33 molecule	CR592075|CD33|945|CD33 molecule
hg18_v1_chr19_-_49725387_49725387	0.0378495	SOX2.p2	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20	NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20
hg18_v1_chr1_-_203985896_203985931	0.0377756	SOX2.p2	BC000805|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AB049824|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK300416|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr3_+_38470782_38470813	0.0377588	SOX2.p2	NM_001106|ACVR2B|93|activin A receptor, type IIB	BC096243|ACVR2B|93|activin A receptor, type IIB	BC096244|ACVR2B|93|activin A receptor, type IIB	BC096245|ACVR2B|93|activin A receptor, type IIB	BC099642|ACVR2B|93|activin A receptor, type IIB	X77533|ACVR2B|93|activin A receptor, type IIB
hg18_v1_chr8_+_39890484_39890598	0.0376409	SOX2.p2	NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1	AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR614485|IDO1|3620|indoleamine 2,3-dioxygenase 1	BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1	X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR613807|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR616634|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR621546|IDO1|3620|indoleamine 2,3-dioxygenase 1	CR591703|IDO1|3620|indoleamine 2,3-dioxygenase 1	AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1
hg18_v1_chr19_-_63722929_63722953	0.0376261	SOX2.p2	CR613426|ZBTB45|84878|zinc finger and BTB domain containing 45
hg18_v1_chr10_+_28862429_28862444	0.0375753	SOX2.p2	NM_016628|WAC|51322|WW domain containing adaptor with coiled-coil	NM_100486|WAC|51322|WW domain containing adaptor with coiled-coil	AK290174|WAC|51322|WW domain containing adaptor with coiled-coil	AK223600|WAC|51322|WW domain containing adaptor with coiled-coil	BC004258|WAC|51322|WW domain containing adaptor with coiled-coil
hg18_v1_chr7_-_107667728_107667849	0.0375195	SOX2.p2	AJ001057|NRCAM|4897|neuronal cell adhesion molecule	NM_001037132|NRCAM|4897|neuronal cell adhesion molecule
hg18_v1_chr5_-_171643247_171643372	0.0375193	SOX2.p2	BC019910|UBTD2|92181|ubiquitin domain containing 2	CR591327|UBTD2|92181|ubiquitin domain containing 2	AK313274|UBTD2|92181|ubiquitin domain containing 2
hg18_v1_chrX_-_138114846_138114881	0.0374562	SOX2.p2	AK303685|FGF13|2258|fibroblast growth factor 13	NM_001139498|FGF13|2258|fibroblast growth factor 13	NM_001139500|FGF13|2258|fibroblast growth factor 13	NM_001139501|FGF13|2258|fibroblast growth factor 13	AK297545|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr5_-_99898788_99898849	0.0374386	SOX2.p2	
hg18_v1_chr9_-_21984379_21984399	0.0373709	SOX2.p2	BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
hg18_v1_chr20_+_29931257_29931292	0.0373627	SOX2.p2	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9	AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9
hg18_v1_chr4_-_100492854_100492939	0.0373016	SOX2.p2	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide	NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide
hg18_v1_chr12_+_67366989_67367072	0.0372518	SOX2.p2	AJ295745|NUP107|57122|nucleoporin 107kDa	NM_020401|NUP107|57122|nucleoporin 107kDa	AK055629|NUP107|57122|nucleoporin 107kDa	AK315157|NUP107|57122|nucleoporin 107kDa	AK094183|NUP107|57122|nucleoporin 107kDa	BC017167|NUP107|57122|nucleoporin 107kDa	BC043343|NUP107|57122|nucleoporin 107kDa
hg18_v1_chr5_+_53787187_53787376	0.0372203	SOX2.p2	AK314215|HSPB3|8988|heat shock 27kDa protein 3	NM_006308|HSPB3|8988|heat shock 27kDa protein 3	U15590|HSPB3|8988|heat shock 27kDa protein 3	Y17782|HSPB3|8988|heat shock 27kDa protein 3	BC126272|HSPB3|8988|heat shock 27kDa protein 3	BC132869|HSPB3|8988|heat shock 27kDa protein 3	CR450314|HSPB3|8988|heat shock 27kDa protein 3
hg18_v1_chr1_-_175400441_175400456	0.0371908	SOX2.p2	BC142697|ASTN1|460|astrotactin 1	AB006627|ASTN1|460|astrotactin 1	BC146795|ASTN1|460|astrotactin 1
hg18_v1_chr18_+_40514772_40514961	0.0371612	SOX2.p2	AB007897|SETBP1|26040|SET binding protein 1	BC146776|SETBP1|26040|SET binding protein 1	NM_015559|SETBP1|26040|SET binding protein 1
hg18_v1_chr11_+_737428_737440	0.0371584	SOX2.p2	L19437|TALDO1|6888|transaldolase 1	NM_006755|TALDO1|6888|transaldolase 1
hg18_v1_chr8_-_18585721_18585904	0.0370824	SOX2.p2	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3	EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3	AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3	BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr1_-_53566171_53566330	0.0370614	SOX2.p2	Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
hg18_v1_chr4_+_77214886_77214900	0.0370512	SOX2.p2	AY543660|ART3|419|ADP-ribosyltransferase 3	BC008397|ART3|419|ADP-ribosyltransferase 3	BC017913|ART3|419|ADP-ribosyltransferase 3	NM_001130016|ART3|419|ADP-ribosyltransferase 3	NM_001179|ART3|419|ADP-ribosyltransferase 3	AK295305|ART3|419|ADP-ribosyltransferase 3	AK308810|ART3|419|ADP-ribosyltransferase 3	AY543655|ART3|419|ADP-ribosyltransferase 3
hg18_v1_chr7_+_27746335_27746353	0.0370423	SOX2.p2	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr2_-_55131202_55131237	0.0370351	SOX2.p2	AY123246|RTN4|57142|reticulon 4	NM_020532|RTN4|57142|reticulon 4	NM_153828|RTN4|57142|reticulon 4	NM_207520|RTN4|57142|reticulon 4
hg18_v1_chr17_-_10362583_10362583	0.0369169	SOX2.p2	AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult	NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult
hg18_v1_chr7_-_136678999_136679023	0.036906	SOX2.p2	CR620419|PTN|5764|pleiotrophin
hg18_v1_chrX_+_119268518_119268711	0.0369039	SOX2.p2	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33	NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33	AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33	AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33	BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33
hg18_v1_chr11_-_105398118_105398221	0.0368956	SOX2.p2	AL834523|KIAA1826|84437|KIAA1826	BC041118|KIAA1826|84437|KIAA1826	AB058729|KIAA1826|84437|KIAA1826	NM_032424|KIAA1826|84437|KIAA1826
hg18_v1_chr14_+_22633728_22633819	0.0368914	SOX2.p2	AK024794|C14orf119|55017|chromosome 14 open reading frame 119	CR622831|C14orf119|55017|chromosome 14 open reading frame 119
hg18_v1_chr3_+_173240126_173240131	0.0368585	SOX2.p2	AK127826|FNDC3B|64778|fibronectin type III domain containing 3B
hg18_v1_chr20_+_30161173_30161231	0.0367843	SOX2.p2	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4	AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4	BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4	D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4
hg18_v1_chr1_-_201422533_201422565	0.0366656	SOX2.p2	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chr4_-_138673014_138673070	0.0366605	SOX2.p2	AK297122|PCDH18|54510|protocadherin 18	BC022227|PCDH18|54510|protocadherin 18
hg18_v1_chr20_+_29565974_29566124	0.0366367	SOX2.p2	AJ420895|HM13|81502|histocompatibility (minor) 13	DQ896206|HM13|81502|histocompatibility (minor) 13	AF515663|HM13|81502|histocompatibility (minor) 13	CR601811|HM13|81502|histocompatibility (minor) 13
hg18_v1_chr19_-_47623340_47623417	0.0365673	SOX2.p2	AK292482|LIPE|3991|lipase, hormone-sensitive	BC029961|LIPE|3991|lipase, hormone-sensitive	BC070041|LIPE|3991|lipase, hormone-sensitive	NM_005357|LIPE|3991|lipase, hormone-sensitive	U40002|LIPE|3991|lipase, hormone-sensitive
hg18_v1_chr14_+_64041257_64041295	0.0365185	SOX2.p2	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1
hg18_v1_chr3_+_70068440_70068563	0.0363953	SOX2.p2	NM_000248|MITF|4286|microphthalmia-associated transcription factor	NM_001184968|MITF|4286|microphthalmia-associated transcription factor	NM_198158|MITF|4286|microphthalmia-associated transcription factor	NM_198178|MITF|4286|microphthalmia-associated transcription factor	Z29678|MITF|4286|microphthalmia-associated transcription factor	BC012503|MITF|4286|microphthalmia-associated transcription factor	BC065243|MITF|4286|microphthalmia-associated transcription factor	BC026961|MITF|4286|microphthalmia-associated transcription factor	GU355676|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr16_-_47873183_47873287	0.0363878	SOX2.p2	M58583|CBLN1|869|cerebellin 1 precursor	AK314276|CBLN1|869|cerebellin 1 precursor	NM_004352|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr3_-_195835197_195835231	0.0363215	SOX2.p2	BX647418|TMEM44|93109|transmembrane protein 44
hg18_v1_chr20_+_60151868_60152444	0.0362836	SOX2.p2	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1	EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1
hg18_v1_chr4_-_147079018_147079236	0.0362656	SOX2.p2	AK091130|ZNF827|152485|zinc finger protein 827	NM_178835|ZNF827|152485|zinc finger protein 827	BC117407|ZNF827|152485|zinc finger protein 827	BC143577|ZNF827|152485|zinc finger protein 827	AF450485|ZNF827|152485|zinc finger protein 827	AK225805|ZNF827|152485|zinc finger protein 827
hg18_v1_chr3_+_189413414_189413414	0.0361864	SOX2.p2	NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma	U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma
hg18_v1_chr11_-_58368555_58368574	0.0361698	SOX2.p2	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2	NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2	BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2
hg18_v1_chr5_+_176492629_176492643	0.0361535	SOX2.p2	AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr14_-_22358752_22358853	0.0361334	SOX2.p2	Y18474|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	BX248291|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR617040|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR605487|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AF092032|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	AJ130718|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	CR601579|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	NM_001126106|SLC7A7|9056|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
hg18_v1_chr6_+_127706189_127706320	0.0360721	SOX2.p2	
hg18_v1_chr5_-_83715947_83716057	0.0360581	SOX2.p2	U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3
hg18_v1_chr22_-_25343959_25344007	0.0360407	SOX2.p2	CR456425|CRYBB1|1414|crystallin, beta B1	NM_001887|CRYBB1|1414|crystallin, beta B1	U35340|CRYBB1|1414|crystallin, beta B1
hg18_v1_chr6_+_151228383_151228544	0.0359949	SOX2.p2	NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
hg18_v1_chr8_+_7789608_7789621	0.0359776	SOX2.p2	BC069285|DEFB4A|1673|defensin, beta 4A	NM_004942|DEFB4A|1673|defensin, beta 4A	BC093985|DEFB4A|1673|defensin, beta 4A	BC093983|DEFB4A|1673|defensin, beta 4A	Z71389|DEFB4A|1673|defensin, beta 4A
hg18_v1_chr8_+_87180248_87180273	0.0359445	SOX2.p2	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2	AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg18_v1_chr16_-_10696285_10696302	0.0359284	SOX2.p2	BC130336|TEKT5|146279|tektin 5	BC130338|TEKT5|146279|tektin 5	AK057433|TEKT5|146279|tektin 5	NM_144674|TEKT5|146279|tektin 5
hg18_v1_chr11_-_55987452_55987452	0.0359188	SOX2.p2	NM_001004743|OR5M9|390162|olfactory receptor, family 5, subfamily M, member 9
hg18_v1_chr1_-_21375939_21375975	0.0359028	SOX2.p2	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr7_+_73709991_73710126	0.0358817	SOX2.p2	BC099907|GTF2I|2969|general transcription factor IIi	AK294935|GTF2I|2969|general transcription factor IIi	AF035737|GTF2I|2969|general transcription factor IIi	AF038967|GTF2I|2969|general transcription factor IIi	AF038968|GTF2I|2969|general transcription factor IIi	AF038969|GTF2I|2969|general transcription factor IIi
hg18_v1_chrX_+_135406903_135407064	0.0357768	SOX2.p2	AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1	NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1
hg18_v1_chr15_+_41450642_41450844	0.0357748	SOX2.p2	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4	DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4	EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4
hg18_v1_chr17_-_59818033_59818157	0.035756	SOX2.p2	X96849|PECAM1|5175|platelet/endothelial cell adhesion molecule
hg18_v1_chr2_+_101235782_101235867	0.0356714	SOX2.p2	AF103798|C2orf29|55571|chromosome 2 open reading frame 29	BC064421|C2orf29|55571|chromosome 2 open reading frame 29	BC018664|C2orf29|55571|chromosome 2 open reading frame 29
hg18_v1_chr11_-_85107569_85107858	0.0355987	SOX2.p2	BC110315|SYTL2|54843|synaptotagmin-like 2	CR595112|SYTL2|54843|synaptotagmin-like 2	BC068495|SYTL2|54843|synaptotagmin-like 2	AK298604|SYTL2|54843|synaptotagmin-like 2	AK074737|SYTL2|54843|synaptotagmin-like 2	NM_206929|SYTL2|54843|synaptotagmin-like 2	AK092121|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr1_+_22650934_22651092	0.03559	SOX2.p2	AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40	BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40
hg18_v1_chr18_-_71050034_71050166	0.035586	SOX2.p2	AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2
hg18_v1_chr13_-_106018445_106018528	0.0354783	SOX2.p2	BC050434|ARGLU1|55082|arginine and glutamate rich 1	BC071587|ARGLU1|55082|arginine and glutamate rich 1	AK001016|ARGLU1|55082|arginine and glutamate rich 1	NM_018011|ARGLU1|55082|arginine and glutamate rich 1
hg18_v1_chr7_-_148356433_148356543	0.0354568	SOX2.p2	DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4	DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4	BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4	BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4	AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr2_+_160277273_160277300	0.0354461	SOX2.p2	BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr16_-_67723511_67723562	0.0354145	SOX2.p2	NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr5_+_86599902_86599920	0.0354123	SOX2.p2	M23379|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr20_+_31268779_31268818	0.035206	SOX2.p2	BC041904|C20orf71|128861|chromosome 20 open reading frame 71	NM_001042439|C20orf71|128861|chromosome 20 open reading frame 71	NM_178466|C20orf71|128861|chromosome 20 open reading frame 71	BC066354|C20orf71|128861|chromosome 20 open reading frame 71
hg18_v1_chr5_+_34692124_34692216	0.0352032	SOX2.p2	NM_001145522|RAI14|26064|retinoic acid induced 14	NM_015577|RAI14|26064|retinoic acid induced 14
hg18_v1_chr7_+_89681069_89681069	0.0351006	SOX2.p2	AF526382|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2	AY358267|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2	NM_001040666|STEAP2|261729|six transmembrane epithelial antigen of the prostate 2
hg18_v1_chr16_-_4502980_4503124	0.035036	SOX2.p2	AK311295|C16orf5|29965|chromosome 16 open reading frame 5	BC007604|C16orf5|29965|chromosome 16 open reading frame 5
hg18_v1_chr6_-_24827265_24827381	0.0350191	SOX2.p2	AK022681|C6orf62|81688|chromosome 6 open reading frame 62	AB075502|C6orf62|81688|chromosome 6 open reading frame 62	AL136632|C6orf62|81688|chromosome 6 open reading frame 62	NM_030939|C6orf62|81688|chromosome 6 open reading frame 62
hg18_v1_chr14_-_23106779_23106904	0.0349826	SOX2.p2	BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	CR614596|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit
hg18_v1_chr1_+_110361634_110361667	0.0349545	SOX2.p2	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1
hg18_v1_chr12_-_106678910_106679029	0.0349307	SOX2.p2	AK056378|PRDM4|11108|PR domain containing 4
hg18_v1_chr16_-_67723993_67723993	0.034925	SOX2.p2	NM_001039690|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr6_-_11340886_11340886	0.0349215	SOX2.p2	L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9
hg18_v1_chr1_-_172258129_172258147	0.034717	SOX2.p2	
hg18_v1_chr14_-_68689284_68689573	0.0346538	SOX2.p2	BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5	BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5	AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr6_+_43845915_43846077	0.0345311	SOX2.p2	NM_001025366|VEGFA|7422|vascular endothelial growth factor A	NM_001025367|VEGFA|7422|vascular endothelial growth factor A	NM_001025368|VEGFA|7422|vascular endothelial growth factor A	NM_001025369|VEGFA|7422|vascular endothelial growth factor A	NM_001025370|VEGFA|7422|vascular endothelial growth factor A	NM_001033756|VEGFA|7422|vascular endothelial growth factor A	NM_001171622|VEGFA|7422|vascular endothelial growth factor A	NM_001171623|VEGFA|7422|vascular endothelial growth factor A	NM_001171624|VEGFA|7422|vascular endothelial growth factor A	NM_001171625|VEGFA|7422|vascular endothelial growth factor A	NM_001171626|VEGFA|7422|vascular endothelial growth factor A	NM_001171627|VEGFA|7422|vascular endothelial growth factor A	NM_001171628|VEGFA|7422|vascular endothelial growth factor A	NM_001171629|VEGFA|7422|vascular endothelial growth factor A	NM_001171630|VEGFA|7422|vascular endothelial growth factor A	NM_003376|VEGFA|7422|vascular endothelial growth factor A	BC058855|VEGFA|7422|vascular endothelial growth factor A	BC019867|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr1_-_183392442_183392739	0.0345051	SOX2.p2	AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr20_+_43470354_43470578	0.0344922	SOX2.p2	AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	CR595212|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg18_v1_chr7_-_136678815_136678871	0.0344781	SOX2.p2	D90226|PTN|5764|pleiotrophin
hg18_v1_chr3_-_14963980_14964102	0.0344415	SOX2.p2	
hg18_v1_chr5_+_15553736_15553760	0.0343438	SOX2.p2	BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr18_+_647674_647748	0.0342933	SOX2.p2	BC002567|TYMS|7298|thymidylate synthetase	CR608281|TYMS|7298|thymidylate synthetase	BC018858|TYMS|7298|thymidylate synthetase	CR617715|TYMS|7298|thymidylate synthetase	CR607878|TYMS|7298|thymidylate synthetase	CR600251|TYMS|7298|thymidylate synthetase	CR607354|TYMS|7298|thymidylate synthetase	CR612332|TYMS|7298|thymidylate synthetase	AK292620|TYMS|7298|thymidylate synthetase	CR617359|TYMS|7298|thymidylate synthetase	CR595729|TYMS|7298|thymidylate synthetase	DQ892149|TYMS|7298|thymidylate synthetase	AB077207|TYMS|7298|thymidylate synthetase	AB077208|TYMS|7298|thymidylate synthetase	BT006811|TYMS|7298|thymidylate synthetase
hg18_v1_chr3_+_198961620_198961657	0.0342392	SOX2.p2	AK302546|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr13_+_52500830_52500996	0.0341789	SOX2.p2	AK000683|OLFM4|10562|olfactomedin 4	BC117329|OLFM4|10562|olfactomedin 4	AY358567|OLFM4|10562|olfactomedin 4	NM_006418|OLFM4|10562|olfactomedin 4	AF097021|OLFM4|10562|olfactomedin 4	AK300947|OLFM4|10562|olfactomedin 4
hg18_v1_chr7_+_120416103_120416161	0.0341741	SOX2.p2	AL832638|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr17_-_34607257_34607505	0.034157	SOX2.p2	DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit
hg18_v1_chr18_+_647633_647663	0.0341072	SOX2.p2	AB062290|TYMS|7298|thymidylate synthetase	CR605696|TYMS|7298|thymidylate synthetase	CR612901|TYMS|7298|thymidylate synthetase	AK314140|TYMS|7298|thymidylate synthetase	X02308|TYMS|7298|thymidylate synthetase	CR618525|TYMS|7298|thymidylate synthetase	CR625557|TYMS|7298|thymidylate synthetase	CR611174|TYMS|7298|thymidylate synthetase
hg18_v1_chr12_+_109424387_109424530	0.0340928	SOX2.p2	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)	NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)	AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)	BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)	AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)	AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)	BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)	BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)	AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)
hg18_v1_chr10_+_22645304_22645357	0.0340916	SOX2.p2	NM_012071|COMMD3|23412|COMM domain containing 3	BX647275|COMMD3|23412|COMM domain containing 3	AF201948|COMMD3|23412|COMM domain containing 3	CR625344|COMMD3|23412|COMM domain containing 3	BC022898|COMMD3|23412|COMM domain containing 3	AF078848|COMMD3|23412|COMM domain containing 3	AK128789|COMMD3|23412|COMM domain containing 3	AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 read-through transcript	AY542159|COMMD3|23412|COMM domain containing 3	CR596018|COMMD3|23412|COMM domain containing 3	CR610659|COMMD3|23412|COMM domain containing 3	CR612205|COMMD3|23412|COMM domain containing 3
hg18_v1_chr14_+_72672960_72672970	0.0340585	SOX2.p2	AJ008005|PSEN1|5663|presenilin 1
hg18_v1_chr1_-_203985752_203985779	0.0338318	SOX2.p2	AY823399|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr16_+_67723988_67724019	0.0337866	SOX2.p2	NM_032830|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr1_+_32889335_32889545	0.0337196	SOX2.p2	NM_001135255|RBBP4|5928|retinoblastoma binding protein 4	NM_005610|RBBP4|5928|retinoblastoma binding protein 4	AK312571|RBBP4|5928|retinoblastoma binding protein 4	AK299410|RBBP4|5928|retinoblastoma binding protein 4	BC003092|RBBP4|5928|retinoblastoma binding protein 4	X74262|RBBP4|5928|retinoblastoma binding protein 4	X71810|RBBP4|5928|retinoblastoma binding protein 4	BC053904|RBBP4|5928|retinoblastoma binding protein 4	AK222779|RBBP4|5928|retinoblastoma binding protein 4	BC075836|RBBP4|5928|retinoblastoma binding protein 4	DQ892499|RBBP4|5928|retinoblastoma binding protein 4	DQ895712|RBBP4|5928|retinoblastoma binding protein 4	BT007309|RBBP4|5928|retinoblastoma binding protein 4	AK299251|RBBP4|5928|retinoblastoma binding protein 4	NM_001135256|RBBP4|5928|retinoblastoma binding protein 4
hg18_v1_chr13_+_27092846_27093085	0.0337081	SOX2.p2	AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa
hg18_v1_chr2_+_201756048_201756162	0.0336345	SOX2.p2	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg18_v1_chr1_-_199259447_199259462	0.0336141	SOX2.p2	AB007918|KIF21B|23046|kinesin family member 21B	NM_017596|KIF21B|23046|kinesin family member 21B
hg18_v1_chr7_+_23252926_23252935	0.0336068	SOX2.p2	AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb	CR620418|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chrX_-_24575375_24575386	0.0335778	SOX2.p2	AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta
hg18_v1_chr11_+_20000938_20000990	0.0335758	SOX2.p2	AK298346|NAV2|89797|neuron navigator 2	AJ488208|NAV2|89797|neuron navigator 2
hg18_v1_chr9_-_35640852_35640946	0.0335334	SOX2.p2	CR624155|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1
hg18_v1_chr19_+_56420131_56420179	0.0334868	SOX2.p2	AK293934|CD33|945|CD33 molecule	NM_001082618|CD33|945|CD33 molecule	NM_001177608|CD33|945|CD33 molecule	NM_001772|CD33|945|CD33 molecule	AK309558|CD33|945|CD33 molecule	M23197|CD33|945|CD33 molecule	AY162464|CD33|945|CD33 molecule
hg18_v1_chr12_+_12761085_12761702	0.0334577	SOX2.p2	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)	AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg18_v1_chr22_+_39817733_39817740	0.0333976	SOX2.p2	U01877|EP300|2033|E1A binding protein p300
hg18_v1_chr7_+_123083096_123083251	0.0333466	SOX2.p2	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)	AK299434|LMOD2|442721|leiomodin 2 (cardiac)	AK299389|LMOD2|442721|leiomodin 2 (cardiac)	AK300698|LMOD2|442721|leiomodin 2 (cardiac)	BC017911|LMOD2|442721|leiomodin 2 (cardiac)	BC062765|LMOD2|442721|leiomodin 2 (cardiac)
hg18_v1_chr1_-_203985963_203985994	0.0333387	SOX2.p2	NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr11_-_85103438_85103438	0.0332777	SOX2.p2	NM_032379|SYTL2|54843|synaptotagmin-like 2
hg18_v1_chr6_+_43845875_43845914	0.0331797	SOX2.p2	CR614384|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr5_+_86599982_86600036	0.0331605	SOX2.p2	
hg18_v1_chr2_-_203484445_203484674	0.0330894	SOX2.p2	DQ892874|WDR12|55759|WD repeat domain 12	DQ896123|WDR12|55759|WD repeat domain 12	CR589963|WDR12|55759|WD repeat domain 12	EF011617|WDR12|55759|WD repeat domain 12	BC008082|WDR12|55759|WD repeat domain 12	AF242546|WDR12|55759|WD repeat domain 12	CR613990|WDR12|55759|WD repeat domain 12	CR622430|WDR12|55759|WD repeat domain 12	AK299489|WDR12|55759|WD repeat domain 12	AK001743|WDR12|55759|WD repeat domain 12	AK022781|WDR12|55759|WD repeat domain 12	AK022782|WDR12|55759|WD repeat domain 12
hg18_v1_chr1_-_203985932_203985939	0.0330579	SOX2.p2	
hg18_v1_chr15_-_54997964_54998093	0.0330203	SOX2.p2	CR612225|LOC145783|145783|hypothetical LOC145783	AK096657|LOC145783|145783|hypothetical LOC145783
hg18_v1_chr2_+_108571336_108571466	0.0330075	SOX2.p2	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1	NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1
hg18_v1_chr17_+_58981582_58981611	0.0329963	SOX2.p2	AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR590100|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR591816|DCAF7|10238|DDB1 and CUL4 associated factor 7	CR613886|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr15_-_38953628_38953850	0.0329901	SOX2.p2	AY059636|RHOV|171177|ras homolog gene family, member V	CR615243|RHOV|171177|ras homolog gene family, member V	BC112945|RHOV|171177|ras homolog gene family, member V	CR618466|RHOV|171177|ras homolog gene family, member V	BC019353|RHOV|171177|ras homolog gene family, member V	BC105020|RHOV|171177|ras homolog gene family, member V	BC105022|RHOV|171177|ras homolog gene family, member V	AB079131|RHOV|171177|ras homolog gene family, member V	CR599960|RHOV|171177|ras homolog gene family, member V	NM_133639|RHOV|171177|ras homolog gene family, member V
hg18_v1_chr1_-_115060904_115060911	0.0329587	SOX2.p2	BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr16_+_70053681_70053698	0.0328252	SOX2.p2	
hg18_v1_chr6_-_28294642_28294869	0.0328142	SOX2.p2	AK292767|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC050562|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC015543|LOC222699|222699|transducer of ERBB2, 2 pseudogene	BC039027|LOC222699|222699|transducer of ERBB2, 2 pseudogene
hg18_v1_chr14_-_87529600_87529659	0.0327886	SOX2.p2	AK302956|GALC|2581|galactosylceramidase	NM_000153|GALC|2581|galactosylceramidase	NM_001037525|GALC|2581|galactosylceramidase
hg18_v1_chr2_-_56003859_56003859	0.0327759	SOX2.p2	NM_004105|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1
hg18_v1_chr11_-_118394242_118394288	0.0327648	SOX2.p2	CR608319|RPS25|6230|ribosomal protein S25	CR620392|RPS25|6230|ribosomal protein S25	CR622778|RPS25|6230|ribosomal protein S25	BC004986|RPS25|6230|ribosomal protein S25	AK311883|RPS25|6230|ribosomal protein S25	M64716|RPS25|6230|ribosomal protein S25	D28369|RPS25|6230|ribosomal protein S25	NM_001028|RPS25|6230|ribosomal protein S25
hg18_v1_chr7_-_94791670_94791751	0.0327124	SOX2.p2	M63013|PON1|5444|paraoxonase 1	M63012|PON1|5444|paraoxonase 1	S64615|PON1|5444|paraoxonase 1	AK314027|PON1|5444|paraoxonase 1	BC074719|PON1|5444|paraoxonase 1
hg18_v1_chr11_-_62231636_62231775	0.0326166	SOX2.p2	NM_001122955|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr4_-_175680366_175680366	0.0326087	SOX2.p2	AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)	NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)	NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)
hg18_v1_chr11_-_5494391_5494531	0.0325874	SOX2.p2	BC012183|UBQLNL|143630|ubiquilin-like	BC034977|UBQLNL|143630|ubiquilin-like	AK057255|UBQLNL|143630|ubiquilin-like	NM_145053|UBQLNL|143630|ubiquilin-like
hg18_v1_chrX_+_41078787_41078831	0.0325859	SOX2.p2	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr5_-_150264583_150264599	0.0325794	SOX2.p2	AF395541|ZNF300|91975|zinc finger protein 300
hg18_v1_chr12_+_6473552_6473558	0.0324343	SOX2.p2	BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2	NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr22_-_17303654_17303809	0.032419	SOX2.p2	AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1	BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1	BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1	BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1
hg18_v1_chr6_-_32268267_32268419	0.0323947	SOX2.p2	AF155657|GPSM3|63940|G-protein signaling modulator 3	BC018724|GPSM3|63940|G-protein signaling modulator 3
hg18_v1_chr15_+_36331411_36331963	0.0323927	SOX2.p2	AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1	BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1
hg18_v1_chr9_-_35818728_35818743	0.0323728	SOX2.p2	BC146808|C9orf128|392307|chromosome 9 open reading frame 128	BX648702|C9orf128|392307|chromosome 9 open reading frame 128	NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128
hg18_v1_chr16_+_8714326_8714347	0.0323055	SOX2.p2	NM_000663|ABAT|18|4-aminobutyrate aminotransferase	BC013965|ABAT|18|4-aminobutyrate aminotransferase
hg18_v1_chr3_+_184648089_184648153	0.0322805	SOX2.p2	CR603855|LOC100505687|100505687|hypothetical LOC100505687	AK057000|LOC100505687|100505687|hypothetical LOC100505687
hg18_v1_chr17_+_70520339_70520405	0.0322654	SOX2.p2	AK222553|ICT1|3396|immature colon carcinoma transcript 1	AK314138|ICT1|3396|immature colon carcinoma transcript 1	BC015335|ICT1|3396|immature colon carcinoma transcript 1	NM_001545|ICT1|3396|immature colon carcinoma transcript 1	X81788|ICT1|3396|immature colon carcinoma transcript 1	DQ890655|ICT1|3396|immature colon carcinoma transcript 1	DQ893834|ICT1|3396|immature colon carcinoma transcript 1	BT007111|ICT1|3396|immature colon carcinoma transcript 1
hg18_v1_chr5_-_54639158_54639279	0.0321436	SOX2.p2	BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg18_v1_chr11_-_56267862_56267862	0.0321164	SOX2.p2	NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4
hg18_v1_chr14_-_79748273_79748277	0.0320745	SOX2.p2	NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	NM_013989|DIO2|1734|deiodinase, iodothyronine, type II
hg18_v1_chr20_-_1298493_1298697	0.03204	SOX2.p2	CR615284|FKBP1A|2280|FK506 binding protein 1A, 12kDa	CR602019|FKBP1A|2280|FK506 binding protein 1A, 12kDa
hg18_v1_chr18_-_62422195_62422388	0.0320388	SOX2.p2	AJ007607|CDH19|28513|cadherin 19, type 2	NM_021153|CDH19|28513|cadherin 19, type 2	AK304000|CDH19|28513|cadherin 19, type 2	AK315257|CDH19|28513|cadherin 19, type 2	BC015877|CDH19|28513|cadherin 19, type 2
hg18_v1_chr2_+_113542017_113542029	0.0319499	SOX2.p2	AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)	NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)	BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)	AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)
hg18_v1_chr8_+_126079929_126079985	0.0319189	SOX2.p2	BX647400|SQLE|6713|squalene epoxidase
hg18_v1_chr17_+_63338500_63338579	0.0318935	SOX2.p2	AK025776|BPTF|2186|bromodomain PHD finger transcription factor
hg18_v1_chr8_+_90839336_90839503	0.0318684	SOX2.p2	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2	AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2
hg18_v1_chr11_+_6904167_6904269	0.0316467	SOX2.p2	AF056618|ZNF215|7762|zinc finger protein 215	NM_013250|ZNF215|7762|zinc finger protein 215	AK298365|ZNF215|7762|zinc finger protein 215
hg18_v1_chr4_-_103485600_103485715	0.0316457	SOX2.p2	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr15_-_75364387_75364387	0.0316124	SOX2.p2	NM_024776|PEAK1|79834|NKF3 kinase family member
hg18_v1_chr2_+_11591692_11591692	0.031561	SOX2.p2	AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1	NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1
hg18_v1_chr16_+_49333513_49333605	0.0314389	SOX2.p2	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)	BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr1_+_28935719_28936022	0.0314301	SOX2.p2	NM_001173128|YTHDF2|51441|YTH domain family, member 2	NM_016258|YTHDF2|51441|YTH domain family, member 2	BC002559|YTHDF2|51441|YTH domain family, member 2	AK292581|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr12_-_109842736_109842786	0.0313379	SOX2.p2	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow	NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow
hg18_v1_chr20_-_42584087_42584097	0.03127	SOX2.p2	AF153979|SERINC3|10955|serine incorporator 3	U49188|SERINC3|10955|serine incorporator 3	AK222923|SERINC3|10955|serine incorporator 3
hg18_v1_chr14_-_68689058_68689132	0.0311886	SOX2.p2	AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr4_-_191185390_191185405	0.0311709	SOX2.p2	BC144572|FRG2|448831|FSHD region gene 2	AY714545|FRG2|448831|FSHD region gene 2	AY744466|FRG2B|441581|FSHD region gene 2 family, member B	NM_001005217|FRG2|448831|FSHD region gene 2
hg18_v1_chr2_-_207291364_207291364	0.031117	SOX2.p2	DQ516347|DYTN|391475|dystrotelin	NM_001093730|DYTN|391475|dystrotelin
hg18_v1_chr20_-_10602139_10602269	0.0310945	SOX2.p2	U77720|JAG1|182|jagged 1	AK312722|JAG1|182|jagged 1
hg18_v1_chr13_+_97403929_97403948	0.031036	SOX2.p2	NM_002271|IPO5|3843|importin 5	BC045640|IPO5|3843|importin 5
hg18_v1_chr14_+_49430109_49430204	0.030998	SOX2.p2	AF047432|ARF6|382|ADP-ribosylation factor 6	AF493885|ARF6|382|ADP-ribosylation factor 6	BT019868|ARF6|382|ADP-ribosylation factor 6	CR541939|ARF6|382|ADP-ribosylation factor 6	CR541964|ARF6|382|ADP-ribosylation factor 6
hg18_v1_chr11_-_33714448_33714600	0.0309871	SOX2.p2	CR608995|CD59|966|CD59 molecule, complement regulatory protein	CR590164|CD59|966|CD59 molecule, complement regulatory protein	CR612934|CD59|966|CD59 molecule, complement regulatory protein	CR596803|CD59|966|CD59 molecule, complement regulatory protein	CR603102|CD59|966|CD59 molecule, complement regulatory protein	CR604104|CD59|966|CD59 molecule, complement regulatory protein	CR615105|CD59|966|CD59 molecule, complement regulatory protein	CR619669|CD59|966|CD59 molecule, complement regulatory protein	CR625449|CD59|966|CD59 molecule, complement regulatory protein	CR625964|CD59|966|CD59 molecule, complement regulatory protein	AK311778|CD59|966|CD59 molecule, complement regulatory protein	X16447|CD59|966|CD59 molecule, complement regulatory protein	CR608941|CD59|966|CD59 molecule, complement regulatory protein	CR613325|CD59|966|CD59 molecule, complement regulatory protein	X17198|CD59|966|CD59 molecule, complement regulatory protein	CR610476|CD59|966|CD59 molecule, complement regulatory protein	CR616585|CD59|966|CD59 molecule, complement regulatory protein	NM_000611|CD59|966|CD59 molecule, complement regulatory protein	NM_203329|CD59|966|CD59 molecule, complement regulatory protein	NM_203330|CD59|966|CD59 molecule, complement regulatory protein	NM_203331|CD59|966|CD59 molecule, complement regulatory protein
hg18_v1_chr14_-_23846904_23846989	0.0308948	SOX2.p2	CR611009|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr10_+_121400881_121400925	0.0308905	SOX2.p2	AK222800|BAG3|9531|BCL2-associated athanogene 3	BC006418|BAG3|9531|BCL2-associated athanogene 3	AF127139|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr17_+_58981648_58981705	0.0308543	SOX2.p2	CR624812|DCAF7|10238|DDB1 and CUL4 associated factor 7	U94747|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr17_-_40348378_40348439	0.0308443	SOX2.p2	BC062609|GFAP|2670|glial fibrillary acidic protein	J04569|GFAP|2670|glial fibrillary acidic protein	BC013596|GFAP|2670|glial fibrillary acidic protein	AF419299|GFAP|2670|glial fibrillary acidic protein	BC041765|GFAP|2670|glial fibrillary acidic protein	AK128790|GFAP|2670|glial fibrillary acidic protein	AK098380|GFAP|2670|glial fibrillary acidic protein	AK098758|GFAP|2670|glial fibrillary acidic protein	AK222683|GFAP|2670|glial fibrillary acidic protein	AK295734|GFAP|2670|glial fibrillary acidic protein	AK296259|GFAP|2670|glial fibrillary acidic protein	AK303728|GFAP|2670|glial fibrillary acidic protein	S40719|GFAP|2670|glial fibrillary acidic protein	AK315398|GFAP|2670|glial fibrillary acidic protein	NM_001131019|GFAP|2670|glial fibrillary acidic protein	NM_002055|GFAP|2670|glial fibrillary acidic protein
hg18_v1_chr2_+_26110888_26111054	0.0308279	SOX2.p2	AF086917|RAB10|10890|RAB10, member RAS oncogene family	AF106681|RAB10|10890|RAB10, member RAS oncogene family	BC000896|RAB10|10890|RAB10, member RAS oncogene family	AF297660|RAB10|10890|RAB10, member RAS oncogene family	AF498945|RAB10|10890|RAB10, member RAS oncogene family	CR457303|RAB10|10890|RAB10, member RAS oncogene family	EU831649|RAB10|10890|RAB10, member RAS oncogene family	EU831733|RAB10|10890|RAB10, member RAS oncogene family	AF091032|RAB10|10890|RAB10, member RAS oncogene family
hg18_v1_chr20_-_10602429_10602710	0.0308188	SOX2.p2	BC126205|JAG1|182|jagged 1	BC126207|JAG1|182|jagged 1	AF028593|JAG1|182|jagged 1	U61276|JAG1|182|jagged 1	U73936|JAG1|182|jagged 1	BC098393|JAG1|182|jagged 1	BC028007|JAG1|182|jagged 1	AF003837|JAG1|182|jagged 1	NM_000214|JAG1|182|jagged 1
hg18_v1_chr2_+_201755865_201755865	0.0307913	SOX2.p2	NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase
hg18_v1_chr13_-_110365336_110365396	0.0307263	SOX2.p2	BC001727|ANKRD10|55608|ankyrin repeat domain 10	AK096083|ANKRD10|55608|ankyrin repeat domain 10	BC039715|ANKRD10|55608|ankyrin repeat domain 10	CR604585|ANKRD10|55608|ankyrin repeat domain 10
hg18_v1_chr17_+_58981573_58981581	0.0307139	SOX2.p2	BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr1_-_149245503_149246008	0.030699	SOX2.p2	BC032321|FAM63A|55793|family with sequence similarity 63, member A	AK303962|FAM63A|55793|family with sequence similarity 63, member A	AK125493|FAM63A|55793|family with sequence similarity 63, member A	AK002142|FAM63A|55793|family with sequence similarity 63, member A	NM_001163259|FAM63A|55793|family with sequence similarity 63, member A	NM_001163260|FAM63A|55793|family with sequence similarity 63, member A	CR594376|FAM63A|55793|family with sequence similarity 63, member A	BC014447|FAM63A|55793|family with sequence similarity 63, member A	NM_001040217|FAM63A|55793|family with sequence similarity 63, member A
hg18_v1_chr4_-_77163609_77163673	0.0306346	SOX2.p2	DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10	DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10	BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10	NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10
hg18_v1_chr12_+_68923043_68923076	0.0306208	SOX2.p2	NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2
hg18_v1_chr3_+_30623376_30623439	0.0306126	SOX2.p2	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)
hg18_v1_chr7_-_148788799_148788985	0.0305966	SOX2.p2	AB033111|ZNF777|27153|zinc finger protein 777	NM_015694|ZNF777|27153|zinc finger protein 777
hg18_v1_chr14_-_23846993_23846995	0.0305792	SOX2.p2	AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr16_+_67724039_67724069	0.030528	SOX2.p2	AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr12_-_43556899_43556899	0.0304965	SOX2.p2	AK299733|NELL2|4753|NEL-like 2 (chicken)	NM_001145107|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr8_-_27524744_27524854	0.0304926	SOX2.p2	M25915|CLU|1191|clusterin	BX648414|CLU|1191|clusterin	NM_203339|CLU|1191|clusterin
hg18_v1_chr5_+_137716285_137716383	0.0304887	SOX2.p2	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B	AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr7_-_137182125_137182148	0.0304827	SOX2.p2	NM_004717|DGKI|9162|diacylglycerol kinase, iota
hg18_v1_chr12_+_22090485_22090506	0.0304732	SOX2.p2	CR625607|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR622845|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	CR614682|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase	AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase
hg18_v1_chr6_+_126702914_126703012	0.0304679	SOX2.p2	BC039556|CENPW|387103|centromere protein W	NM_001012507|CENPW|387103|centromere protein W	AY902475|CENPW|387103|centromere protein W	BC062798|CENPW|387103|centromere protein W	BC046178|CENPW|387103|centromere protein W	BC017928|CENPW|387103|centromere protein W
hg18_v1_chr6_-_27548438_27548923	0.0304558	SOX2.p2	BC022992|ZNF184|7738|zinc finger protein 184	AK123011|ZNF184|7738|zinc finger protein 184	AK312804|ZNF184|7738|zinc finger protein 184	NM_007149|ZNF184|7738|zinc finger protein 184
hg18_v1_chr19_-_9087438_9087438	0.0304427	SOX2.p2	NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1
hg18_v1_chr4_+_169250281_169250426	0.0304272	SOX2.p2	BC007320|ANXA10|11199|annexin A10	NM_007193|ANXA10|11199|annexin A10	AF196478|ANXA10|11199|annexin A10	AJ238979|ANXA10|11199|annexin A10	EU176730|ANXA10|11199|annexin A10
hg18_v1_chr20_-_1420168_1420232	0.0303483	SOX2.p2	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2	NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr20_-_118263_118321	0.0303424	SOX2.p2	AF525930|DEFB128|245939|defensin, beta 128	NM_001037732|DEFB128|245939|defensin, beta 128	BC140936|DEFB128|245939|defensin, beta 128
hg18_v1_chr22_+_44828338_44828438	0.030323	SOX2.p2	
hg18_v1_chr7_+_120415958_120416044	0.0303074	SOX2.p2	NM_024913|C7orf58|79974|chromosome 7 open reading frame 58	AK289978|C7orf58|79974|chromosome 7 open reading frame 58	AL832619|C7orf58|79974|chromosome 7 open reading frame 58
hg18_v1_chr4_-_24195113_24195235	0.0302434	SOX2.p2	AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chr7_+_23252945_23253001	0.0302223	SOX2.p2	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb	BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb	BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb	DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb	BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr11_+_737424_737427	0.0301847	SOX2.p2	BC010103|TALDO1|6888|transaldolase 1	BC009680|TALDO1|6888|transaldolase 1
hg18_v1_chr11_-_8147111_8147168	0.0301142	SOX2.p2	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)
hg18_v1_chr6_-_52968035_52968138	0.0300742	SOX2.p2	AK315369|GSTA4|2941|glutathione S-transferase alpha 4	CR599141|GSTA4|2941|glutathione S-transferase alpha 4	AF020918|GSTA4|2941|glutathione S-transferase alpha 4	AF025887|GSTA4|2941|glutathione S-transferase alpha 4	CR594939|GSTA4|2941|glutathione S-transferase alpha 4	CR625957|GSTA4|2941|glutathione S-transferase alpha 4	BC096817|GSTA4|2941|glutathione S-transferase alpha 4	NM_001512|GSTA4|2941|glutathione S-transferase alpha 4
hg18_v1_chr17_+_63462276_63462328	0.0299575	SOX2.p2	NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR599710|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR607334|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR605528|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chrX_+_85404626_85404626	0.029949	SOX2.p2	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)	AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)	NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)
hg18_v1_chrX_-_74659982_74660000	0.0299241	SOX2.p2	AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr14_-_69896056_69896142	0.0298809	SOX2.p2	CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR594391|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	CR603105|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chr17_-_5312959_5313103	0.029862	SOX2.p2	BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr15_-_75259714_75259853	0.0298601	SOX2.p2	AK091802|PEAK1|79834|NKF3 kinase family member
hg18_v1_chrX_-_130250880_130251007	0.0298498	SOX2.p2	Y10523|IGSF1|3547|immunoglobulin superfamily, member 1	AK057916|IGSF1|3547|immunoglobulin superfamily, member 1	BC063884|IGSF1|3547|immunoglobulin superfamily, member 1	AF034198|IGSF1|3547|immunoglobulin superfamily, member 1	CR614008|IGSF1|3547|immunoglobulin superfamily, member 1	AB058894|IGSF1|3547|immunoglobulin superfamily, member 1	AK226008|IGSF1|3547|immunoglobulin superfamily, member 1	AK307871|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr1_-_41398126_41398191	0.0298483	SOX2.p2	AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)
hg18_v1_chr5_+_138116972_138117015	0.0298236	SOX2.p2	NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr3_-_115960807_115960813	0.0297859	SOX2.p2	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20	NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20
hg18_v1_chr2_-_234441766_234441786	0.0297792	SOX2.p2	AK301707|MSL3L2|151507|male-specific lethal 3-like 2 (Drosophila)
hg18_v1_chr2_-_160181206_160181325	0.0296459	SOX2.p2	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr1_+_40688360_40688414	0.0295362	SOX2.p2	AK091612|ZNF643|65243|zinc finger protein 643	AL137241|ZNF643|65243|zinc finger protein 643
hg18_v1_chr14_+_61231795_61232091	0.0295173	SOX2.p2	NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg18_v1_chr14_+_19513442_19513517	0.0294517	SOX2.p2	BC140726|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15	NM_001005486|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15
hg18_v1_chr11_-_111255354_111255390	0.0294508	SOX2.p2	AK302630|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1
hg18_v1_chr7_+_143378393_143378427	0.0294437	SOX2.p2	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5	NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5
hg18_v1_chr17_+_37957509_37957509	0.0294255	SOX2.p2	NM_000413|HSD17B1|3292|hydroxysteroid (17-beta) dehydrogenase 1
hg18_v1_chr1_+_202031425_202031430	0.0294183	SOX2.p2	AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr10_-_101180191_101180521	0.0293566	SOX2.p2	AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR616132|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR626608|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR605482|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR598904|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR615083|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR606661|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR625110|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR601723|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR619243|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR620721|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR625122|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	CR622320|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)
hg18_v1_chr7_-_23020257_23020294	0.0292451	SOX2.p2	CR626024|FAM126A|84668|family with sequence similarity 126, member A	BC018710|FAM126A|84668|family with sequence similarity 126, member A	NM_032581|FAM126A|84668|family with sequence similarity 126, member A
hg18_v1_chr1_-_241484963_241484995	0.029225	SOX2.p2	AK296812|CEP170|9859|centrosomal protein 170kDa	AK299552|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr15_-_72282452_72282498	0.0292033	SOX2.p2	AK310878|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)	AK291966|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)
hg18_v1_chr4_-_168392151_168392221	0.0291572	SOX2.p2	AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg18_v1_chr6_-_33276131_33276134	0.0291454	SOX2.p2	CR618812|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr5_+_138117017_138117044	0.0291085	SOX2.p2	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa
hg18_v1_chr16_+_67724023_67724034	0.029031	SOX2.p2	BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)	AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)
hg18_v1_chr12_+_120055013_120055156	0.0289939	SOX2.p2	NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7	DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7
hg18_v1_chr1_+_28936030_28936219	0.0289058	SOX2.p2	AK303833|YTHDF2|51441|YTH domain family, member 2	NM_001172828|YTHDF2|51441|YTH domain family, member 2	CR599207|YTHDF2|51441|YTH domain family, member 2	AF432214|YTHDF2|51441|YTH domain family, member 2	CR593745|YTHDF2|51441|YTH domain family, member 2	CR595878|YTHDF2|51441|YTH domain family, member 2	AF155095|YTHDF2|51441|YTH domain family, member 2	AF192968|YTHDF2|51441|YTH domain family, member 2	DQ892157|YTHDF2|51441|YTH domain family, member 2	DQ895352|YTHDF2|51441|YTH domain family, member 2	AB451335|YTHDF2|51441|YTH domain family, member 2	AB451484|YTHDF2|51441|YTH domain family, member 2
hg18_v1_chr16_-_74086790_74086807	0.0288899	SOX2.p2	
hg18_v1_chr16_-_52295214_52295303	0.0288556	SOX2.p2	BC136433|RPGRIP1L|23322|RPGRIP1-like	AK096333|RPGRIP1L|23322|RPGRIP1-like	AK308390|RPGRIP1L|23322|RPGRIP1-like	BC017977|RPGRIP1L|23322|RPGRIP1-like	CR749645|RPGRIP1L|23322|RPGRIP1-like	AK307929|RPGRIP1L|23322|RPGRIP1-like	EF565106|RPGRIP1L|23322|RPGRIP1-like	NM_001127897|RPGRIP1L|23322|RPGRIP1-like	NM_015272|RPGRIP1L|23322|RPGRIP1-like	AK304790|RPGRIP1L|23322|RPGRIP1-like
hg18_v1_chr21_+_34658192_34658241	0.0288539	SOX2.p2	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2
hg18_v1_chr3_-_87122936_87122946	0.0288159	SOX2.p2	CR605157|VGLL3|389136|vestigial like 3 (Drosophila)	CR600157|VGLL3|389136|vestigial like 3 (Drosophila)	NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr2_+_157822355_157822723	0.0288039	SOX2.p2	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg18_v1_chr12_-_56159895_56159899	0.0287091	SOX2.p2	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9	AB051853|ARHGAP9|64333|Rho GTPase activating protein 9	NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9
hg18_v1_chr15_-_41000100_41000345	0.0287026	SOX2.p2	CR615164|TTBK2|146057|tau tubulin kinase 2	AF525400|TTBK2|146057|tau tubulin kinase 2	CR611465|TTBK2|146057|tau tubulin kinase 2	AK131372|TTBK2|146057|tau tubulin kinase 2	BC041876|TTBK2|146057|tau tubulin kinase 2	NM_173500|TTBK2|146057|tau tubulin kinase 2	BC071556|TTBK2|146057|tau tubulin kinase 2
hg18_v1_chr6_-_127706204_127706228	0.0286914	SOX2.p2	AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr4_+_100651183_100651222	0.0286909	SOX2.p2	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17	AK093085|C4orf17|84103|chromosome 4 open reading frame 17	AK223345|C4orf17|84103|chromosome 4 open reading frame 17	AK314711|C4orf17|84103|chromosome 4 open reading frame 17	AL136838|C4orf17|84103|chromosome 4 open reading frame 17
hg18_v1_chr11_+_26972203_26972234	0.0286575	SOX2.p2	NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)
hg18_v1_chr1_-_159435440_159435470	0.0286367	SOX2.p2	AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4	NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4
hg18_v1_chr5_-_11957127_11957242	0.0286117	SOX2.p2	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
hg18_v1_chr2_-_208736533_208736610	0.028603	SOX2.p2	EF426311|CRYGA|1418|crystallin, gamma A	NM_014617|CRYGA|1418|crystallin, gamma A	BC114456|CRYGA|1418|crystallin, gamma A
hg18_v1_chr6_+_44295219_44295449	0.0286011	SOX2.p2	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1
hg18_v1_chr9_+_124416768_124416837	0.0285983	SOX2.p2	BC140713|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1	NM_012364|OR1Q1|158131|olfactory receptor, family 1, subfamily Q, member 1
hg18_v1_chr15_-_49830941_49831073	0.0285923	SOX2.p2	NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2
hg18_v1_chr10_-_43212166_43212284	0.0285152	SOX2.p2	NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F
hg18_v1_chr3_+_129253977_129253995	0.0284935	SOX2.p2	AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg18_v1_chr2_+_112996053_112996198	0.0284922	SOX2.p2	AK126378|TTL|150465|tubulin tyrosine ligase
hg18_v1_chr1_+_86943103_86943182	0.0284846	SOX2.p2	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	CR600351|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr2_+_48610567_48610684	0.0284232	SOX2.p2	AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough
hg18_v1_chr17_+_72958920_72959049	0.0283586	SOX2.p2	AK299828|SEPT9|10801|septin 9
hg18_v1_chr8_+_126511739_126511783	0.0283424	SOX2.p2	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)	NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)
hg18_v1_chr10_+_11247419_11247444	0.0283249	SOX2.p2	AK304216|CELF2|10659|CUGBP, Elav-like family member 2
hg18_v1_chr19_+_11327061_11327170	0.0282975	SOX2.p2	NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr15_+_40353657_40353969	0.0282952	SOX2.p2	NM_198141|GANC|2595|glucosidase, alpha; neutral C	AK301467|GANC|2595|glucosidase, alpha; neutral C	AK074037|GANC|2595|glucosidase, alpha; neutral C	BC059406|GANC|2595|glucosidase, alpha; neutral C	BC093833|GANC|2595|glucosidase, alpha; neutral C	BC112051|GANC|2595|glucosidase, alpha; neutral C	AF545045|GANC|2595|glucosidase, alpha; neutral C	AF545046|GANC|2595|glucosidase, alpha; neutral C	AM392591|GANC|2595|glucosidase, alpha; neutral C	AM393467|GANC|2595|glucosidase, alpha; neutral C	BC151223|GANC|2595|glucosidase, alpha; neutral C
hg18_v1_chr10_-_99084417_99084469	0.0282425	SOX2.p2	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2	NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2
hg18_v1_chr1_-_201422368_201422433	0.0282211	SOX2.p2	BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)
hg18_v1_chrX_-_15782842_15782858	0.0282059	SOX2.p2	AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr4_+_142361494_142361516	0.0281653	SOX2.p2	NM_014487|ZNF330|27309|zinc finger protein 330	AK315463|ZNF330|27309|zinc finger protein 330	BC004421|ZNF330|27309|zinc finger protein 330
hg18_v1_chr15_-_88148177_88148182	0.0281181	SOX2.p2	AK298134|ANPEP|290|alanyl (membrane) aminopeptidase
hg18_v1_chr12_-_11030777_11030777	0.0280928	SOX2.p2	BC112100|TAS2R50|259296|taste receptor, type 2, member 50	NM_176890|TAS2R50|259296|taste receptor, type 2, member 50
hg18_v1_chr16_-_67723971_67723975	0.0280845	SOX2.p2	AF525164|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	AK000407|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr9_-_8723893_8723945	0.0280366	SOX2.p2	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D
hg18_v1_chr6_-_28412130_28412130	0.0280283	SOX2.p2	NM_030899|ZNF323|64288|zinc finger protein 323
hg18_v1_chr1_-_244647333_244647336	0.0279564	SOX2.p2	AK024733|SMYD3|64754|SET and MYND domain containing 3	NM_022743|SMYD3|64754|SET and MYND domain containing 3
hg18_v1_chr3_+_46258875_46258966	0.0279271	SOX2.p2	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3	NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3	NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3	AF262300|CCR3|1232|chemokine (C-C motif) receptor 3	AF262299|CCR3|1232|chemokine (C-C motif) receptor 3	AF224495|CCR3|1232|chemokine (C-C motif) receptor 3	AF262301|CCR3|1232|chemokine (C-C motif) receptor 3	AF262302|CCR3|1232|chemokine (C-C motif) receptor 3	AF262303|CCR3|1232|chemokine (C-C motif) receptor 3	AF262304|CCR3|1232|chemokine (C-C motif) receptor 3	BC130318|CCR3|1232|chemokine (C-C motif) receptor 3	BC130320|CCR3|1232|chemokine (C-C motif) receptor 3	BC110297|CCR3|1232|chemokine (C-C motif) receptor 3
hg18_v1_chr15_-_32833980_32834073	0.0279106	SOX2.p2	BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa	BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa	NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa	BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa	BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa
hg18_v1_chr12_+_110689094_110689218	0.0278991	SOX2.p2	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR618953|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR617194|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)	CR620819|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)
hg18_v1_chr6_-_112034166_112034166	0.0278586	SOX2.p2	NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2	NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2
hg18_v1_chr11_-_6148131_6148213	0.0278569	SOX2.p2	NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2
hg18_v1_chrX_-_138114817_138114833	0.0278423	SOX2.p2	AF199613|FGF13|2258|fibroblast growth factor 13
hg18_v1_chr9_+_124463665_124463815	0.0278263	SOX2.p2	NM_001005236|OR1L1|26737|olfactory receptor, family 1, subfamily L, member 1
hg18_v1_chr8_+_86344984_86345007	0.0278123	SOX2.p2	BC052602|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr7_+_73709943_73709972	0.0277487	SOX2.p2	AK292832|GTF2I|2969|general transcription factor IIi	AF015553|GTF2I|2969|general transcription factor IIi	NM_001163636|GTF2I|2969|general transcription factor IIi	NM_001518|GTF2I|2969|general transcription factor IIi	NM_032999|GTF2I|2969|general transcription factor IIi	NM_033000|GTF2I|2969|general transcription factor IIi	NM_033001|GTF2I|2969|general transcription factor IIi
hg18_v1_chr11_+_71221893_71221893	0.0277405	SOX2.p2	AF529416|DEFB108B|245911|defensin, beta 108B	NM_001002035|DEFB108B|245911|defensin, beta 108B
hg18_v1_chr6_-_153000226_153000226	0.0277334	SOX2.p2	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1
hg18_v1_chr1_-_199742864_199742868	0.027675	SOX2.p2	BC018806|CSRP1|1465|cysteine and glycine-rich protein 1	CR606958|CSRP1|1465|cysteine and glycine-rich protein 1	CR598103|CSRP1|1465|cysteine and glycine-rich protein 1	CR613755|CSRP1|1465|cysteine and glycine-rich protein 1	CR613760|CSRP1|1465|cysteine and glycine-rich protein 1	CR616700|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr10_+_121400926_121400927	0.0276418	SOX2.p2	AK313026|BAG3|9531|BCL2-associated athanogene 3
hg18_v1_chr4_+_91035025_91035145	0.0276178	SOX2.p2	AK125557|MMRN1|22915|multimerin 1	AK313566|MMRN1|22915|multimerin 1	BC063848|MMRN1|22915|multimerin 1	NM_007351|MMRN1|22915|multimerin 1	U27109|MMRN1|22915|multimerin 1
hg18_v1_chr6_-_96131974_96132046	0.0276022	SOX2.p2	
hg18_v1_chr6_-_52776558_52776723	0.0275938	SOX2.p2	BC053578|GSTA1|2938|glutathione S-transferase alpha 1	BC110891|GSTA1|2938|glutathione S-transferase alpha 1	CR605001|GSTA1|2938|glutathione S-transferase alpha 1	M15872|GSTA1|2938|glutathione S-transferase alpha 1	CR601373|GSTA1|2938|glutathione S-transferase alpha 1	AK293371|GSTA1|2938|glutathione S-transferase alpha 1	M14777|GSTA1|2938|glutathione S-transferase alpha 1	M21758|GSTA1|2938|glutathione S-transferase alpha 1	M25627|GSTA1|2938|glutathione S-transferase alpha 1	NM_145740|GSTA1|2938|glutathione S-transferase alpha 1	AK310324|GSTA1|2938|glutathione S-transferase alpha 1
hg18_v1_chr6_-_90119169_90119300	0.0275546	SOX2.p2	AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)	BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr3_+_99370233_99370233	0.0275458	SOX2.p2	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15
hg18_v1_chr18_+_59521173_59521173	0.0275439	SOX2.p2	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)	NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
hg18_v1_chr15_+_38240555_38240713	0.0274437	SOX2.p2	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr3_-_39298187_39298236	0.027431	SOX2.p2	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1
hg18_v1_chr15_+_97009194_97009795	0.0274221	SOX2.p2	AB425196|IGF1R|3480|insulin-like growth factor 1 receptor
hg18_v1_chr4_-_124063167_124063255	0.0273805	SOX2.p2	DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg18_v1_chr6_+_84619703_84619738	0.0273392	SOX2.p2	NM_001009994|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC130460|RIPPLY2|134701|ripply2 homolog (zebrafish)	BC132968|RIPPLY2|134701|ripply2 homolog (zebrafish)
hg18_v1_chr5_-_111120764_111120807	0.0273108	SOX2.p2	CR605504|C5orf13|9315|chromosome 5 open reading frame 13	CR606026|C5orf13|9315|chromosome 5 open reading frame 13	CR608957|C5orf13|9315|chromosome 5 open reading frame 13	CR610267|C5orf13|9315|chromosome 5 open reading frame 13	CR611162|C5orf13|9315|chromosome 5 open reading frame 13	CR622215|C5orf13|9315|chromosome 5 open reading frame 13	CR594948|C5orf13|9315|chromosome 5 open reading frame 13	CR602516|C5orf13|9315|chromosome 5 open reading frame 13	CR612701|C5orf13|9315|chromosome 5 open reading frame 13	CR625954|C5orf13|9315|chromosome 5 open reading frame 13	CR602437|C5orf13|9315|chromosome 5 open reading frame 13	CR590608|C5orf13|9315|chromosome 5 open reading frame 13	BC019068|C5orf13|9315|chromosome 5 open reading frame 13	BX649051|C5orf13|9315|chromosome 5 open reading frame 13	BC072013|C5orf13|9315|chromosome 5 open reading frame 13	BC072443|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr11_-_14336606_14336648	0.0272178	SOX2.p2	AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2
hg18_v1_chr1_+_157408000_157408179	0.0271635	SOX2.p2	AK289541|CADM3|57863|cell adhesion molecule 3	NM_021189|CADM3|57863|cell adhesion molecule 3	AK308915|CADM3|57863|cell adhesion molecule 3	CR605082|CADM3|57863|cell adhesion molecule 3	NM_001127173|CADM3|57863|cell adhesion molecule 3	AF363367|CADM3|57863|cell adhesion molecule 3	AY358332|CADM3|57863|cell adhesion molecule 3	AF062733|CADM3|57863|cell adhesion molecule 3	BC033819|CADM3|57863|cell adhesion molecule 3	AY046418|CADM3|57863|cell adhesion molecule 3	AF529206|CADM3|57863|cell adhesion molecule 3	DQ890848|CADM3|57863|cell adhesion molecule 3	DQ894002|CADM3|57863|cell adhesion molecule 3
hg18_v1_chrX_-_55074125_55074221	0.0271575	SOX2.p2	CR620984|ALAS2|212|aminolevulinate, delta-, synthase 2	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2	X60364|ALAS2|212|aminolevulinate, delta-, synthase 2	AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2	NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2
hg18_v1_chr10_+_22645370_22645412	0.0271211	SOX2.p2	CR623274|COMMD3|23412|COMM domain containing 3
hg18_v1_chr6_+_32090516_32090597	0.0271044	SOX2.p2	BC063289|C4A|720|complement component 4A (Rodgers blood group)	AK304564|C4B|721|complement component 4B (Chido blood group)	NM_001002029|C4B|721|complement component 4B (Chido blood group)	NM_007293|C4A|720|complement component 4A (Rodgers blood group)	AB209989|C4A|720|complement component 4A (Rodgers blood group)	BC146673|C4A|720|complement component 4A (Rodgers blood group)	BC151204|C4A|720|complement component 4A (Rodgers blood group)	BC144546|C4A|720|complement component 4A (Rodgers blood group)	BC146849|C4A|720|complement component 4A (Rodgers blood group)	BC171786|C4A|720|complement component 4A (Rodgers blood group)
hg18_v1_chr1_+_40631603_40631603	0.0270846	SOX2.p2	AK308280|SMAP2|64744|small ArfGAP2	NM_001198979|SMAP2|64744|small ArfGAP2
hg18_v1_chr18_-_28606839_28606971	0.0270341	SOX2.p2	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)	AB037805|KLHL14|57565|kelch-like 14 (Drosophila)	NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)
hg18_v1_chr14_-_59264044_59264183	0.0270034	SOX2.p2	DQ355431|RTN1|6252|reticulon 1	L10334|RTN1|6252|reticulon 1	NM_206857|RTN1|6252|reticulon 1
hg18_v1_chr1_-_43628035_43628041	0.0269993	SOX2.p2	BC010019|MED8|112950|mediator complex subunit 8
hg18_v1_chr1_-_76170563_76170703	0.0269936	SOX2.p2	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17	AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17	BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17	AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17	NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17
hg18_v1_chr14_-_37795290_37795324	0.0269653	SOX2.p2	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A	BX248017|CLEC14A|161198|C-type lectin domain family 14, member A	NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A
hg18_v1_chr14_-_60260780_60260841	0.0269636	SOX2.p2	AK309358|SIX4|51804|SIX homeobox 4
hg18_v1_chr18_+_31074985_31075104	0.0269366	SOX2.p2	NM_001135178|ZNF397|84307|zinc finger protein 397	NM_032347|ZNF397|84307|zinc finger protein 397	AF533250|ZNF397|84307|zinc finger protein 397	AY157641|ZNF397|84307|zinc finger protein 397	AK311533|ZNF397|84307|zinc finger protein 397	CR624700|ZNF397|84307|zinc finger protein 397	CR624709|ZNF397|84307|zinc finger protein 397	AK027384|ZNF397|84307|zinc finger protein 397	BC006172|ZNF397|84307|zinc finger protein 397	CR623021|ZNF397|84307|zinc finger protein 397
hg18_v1_chr8_+_118216517_118216517	0.0269362	SOX2.p2	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr8_+_86344945_86344973	0.0269239	SOX2.p2	NM_198584|CA13|377677|carbonic anhydrase XIII
hg18_v1_chr6_+_33276580_33276703	0.0269211	SOX2.p2	NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	CR597948|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	CR622526|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7	D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7
hg18_v1_chr10_+_35455806_35455963	0.0269115	SOX2.p2	NM_001881|CREM|1390|cAMP responsive element modulator	NM_182850|CREM|1390|cAMP responsive element modulator	NM_182853|CREM|1390|cAMP responsive element modulator	NM_183013|CREM|1390|cAMP responsive element modulator	BC066342|CREM|1390|cAMP responsive element modulator	BC017117|CREM|1390|cAMP responsive element modulator
hg18_v1_chr10_+_13243553_13243595	0.0268144	SOX2.p2	NM_018518|MCM10|55388|minichromosome maintenance complex component 10	NM_182751|MCM10|55388|minichromosome maintenance complex component 10	AK292701|MCM10|55388|minichromosome maintenance complex component 10	AK055695|MCM10|55388|minichromosome maintenance complex component 10	BC101727|MCM10|55388|minichromosome maintenance complex component 10	AB042719|MCM10|55388|minichromosome maintenance complex component 10	AL136840|MCM10|55388|minichromosome maintenance complex component 10	BC143490|MCM10|55388|minichromosome maintenance complex component 10
hg18_v1_chr17_+_25828546_25828573	0.0268053	SOX2.p2	AK000606|GOSR1|9527|golgi SNAP receptor complex member 1	AK291381|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1	NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1	NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1	AK298714|GOSR1|9527|golgi SNAP receptor complex member 1	AF047438|GOSR1|9527|golgi SNAP receptor complex member 1	BC012620|GOSR1|9527|golgi SNAP receptor complex member 1	AF073926|GOSR1|9527|golgi SNAP receptor complex member 1	BC040471|GOSR1|9527|golgi SNAP receptor complex member 1
hg18_v1_chr3_-_121883647_121883819	0.0267688	SOX2.p2	EU831603|HGD|3081|homogentisate 1,2-dioxygenase	EU831690|HGD|3081|homogentisate 1,2-dioxygenase	BC071757|HGD|3081|homogentisate 1,2-dioxygenase	Z75048|HGD|3081|homogentisate 1,2-dioxygenase	U63008|HGD|3081|homogentisate 1,2-dioxygenase	AK290782|HGD|3081|homogentisate 1,2-dioxygenase	BC020792|HGD|3081|homogentisate 1,2-dioxygenase	AF045167|HGD|3081|homogentisate 1,2-dioxygenase
hg18_v1_chr7_+_142670711_142670738	0.0267564	SOX2.p2	BC063425|GSTK1|373156|glutathione S-transferase kappa 1	CR597274|GSTK1|373156|glutathione S-transferase kappa 1	AM393732|GSTK1|373156|glutathione S-transferase kappa 1	BC050715|GSTK1|373156|glutathione S-transferase kappa 1	CR613327|GSTK1|373156|glutathione S-transferase kappa 1	AK299968|GSTK1|373156|glutathione S-transferase kappa 1	CR533445|GSTK1|373156|glutathione S-transferase kappa 1	CR605600|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr12_+_83954229_83954279	0.0267453	SOX2.p2	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	NM_032165|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1	AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1
hg18_v1_chr4_+_71986927_71987035	0.0267249	SOX2.p2	AK093545|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	NM_173468|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK299481|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	BC038112|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)	AK313513|MOBKL1A|92597|MOB1, Mps One Binder kinase activator-like 1A (yeast)
hg18_v1_chr18_+_647666_647673	0.0267157	SOX2.p2	CR616172|TYMS|7298|thymidylate synthetase	CR601110|TYMS|7298|thymidylate synthetase
hg18_v1_chr11_-_60885849_60885900	0.0267114	SOX2.p2	BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3	AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr9_-_32540818_32540908	0.0267105	SOX2.p2	U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
hg18_v1_chr12_-_43593977_43593977	0.0267083	SOX2.p2	AK295125|NELL2|4753|NEL-like 2 (chicken)	NM_001145110|NELL2|4753|NEL-like 2 (chicken)
hg18_v1_chr13_-_29937966_29938021	0.0266781	SOX2.p2	X12597|HMGB1|3146|high-mobility group box 1	D63874|HMGB1|3146|high-mobility group box 1	CR616734|HMGB1P6|645292|high-mobility group box 1 pseudogene 6	AB208998|HMGB1|3146|high-mobility group box 1	BC141844|HMGB1|3146|high-mobility group box 1	CR625251|HMGB1|3146|high-mobility group box 1	BC003378|HMGB1|3146|high-mobility group box 1	CR613151|HMGB1|3146|high-mobility group box 1	BC066889|HMGB1|3146|high-mobility group box 1	CR592914|HMGB1|3146|high-mobility group box 1	BC030981|HMGB1|3146|high-mobility group box 1	BC067732|HMGB1|3146|high-mobility group box 1
hg18_v1_chr1_-_152459697_152459896	0.0265329	SOX2.p2	BC000152|C1orf43|25912|chromosome 1 open reading frame 43	AF077036|C1orf43|25912|chromosome 1 open reading frame 43	BC088353|C1orf43|25912|chromosome 1 open reading frame 43	AJ243663|C1orf43|25912|chromosome 1 open reading frame 43	BC006514|C1orf43|25912|chromosome 1 open reading frame 43	NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43	NM_015449|C1orf43|25912|chromosome 1 open reading frame 43	NM_138740|C1orf43|25912|chromosome 1 open reading frame 43
hg18_v1_chr5_-_141318810_141318810	0.026411	SOX2.p2	AF240635|PCDH12|51294|protocadherin 12	NM_016580|PCDH12|51294|protocadherin 12
hg18_v1_chr15_+_61122957_61123066	0.0263941	SOX2.p2	L02923|TPM1|7168|tropomyosin 1 (alpha)
hg18_v1_chr21_+_32706615_32707032	0.0263729	SOX2.p2	CR604238|C21orf63|59271|chromosome 21 open reading frame 63	CR605246|C21orf63|59271|chromosome 21 open reading frame 63	AY358787|C21orf63|59271|chromosome 21 open reading frame 63	NM_058187|C21orf63|59271|chromosome 21 open reading frame 63	CR615783|C21orf63|59271|chromosome 21 open reading frame 63	BC038710|C21orf63|59271|chromosome 21 open reading frame 63	CR608560|C21orf63|59271|chromosome 21 open reading frame 63	CR608969|C21orf63|59271|chromosome 21 open reading frame 63	CR608735|C21orf63|59271|chromosome 21 open reading frame 63	AF358258|C21orf63|59271|chromosome 21 open reading frame 63	AY040087|C21orf63|59271|chromosome 21 open reading frame 63
hg18_v1_chr7_+_18515440_18515473	0.026334	SOX2.p2	AK304410|HDAC9|9734|histone deacetylase 9
hg18_v1_chr4_-_21308415_21308415	0.0263143	SOX2.p2	BX648990|KCNIP4|80333|Kv channel interacting protein 4	DQ148490|KCNIP4|80333|Kv channel interacting protein 4	NM_001035003|KCNIP4|80333|Kv channel interacting protein 4
hg18_v1_chr2_+_176737050_176737050	0.0262763	SOX2.p2	BC005124|HOXD3|3232|homeobox D3	NM_006898|HOXD3|3232|homeobox D3
hg18_v1_chr20_-_1420004_1420067	0.0262433	SOX2.p2	AY424277|SIRPB2|284759|signal-regulatory protein beta 2	AK095499|SIRPB2|284759|signal-regulatory protein beta 2	AK294440|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr1_-_31251315_31251371	0.026243	SOX2.p2	CR592163|PUM1|9698|pumilio homolog 1 (Drosophila)
hg18_v1_chr1_-_21375891_21375931	0.0261996	SOX2.p2	BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3
hg18_v1_chr20_+_61039803_61039999	0.0261435	SOX2.p2	NM_017896|C20orf11|54994|chromosome 20 open reading frame 11	BC032120|C20orf11|54994|chromosome 20 open reading frame 11	AK299509|C20orf11|54994|chromosome 20 open reading frame 11	AK000609|C20orf11|54994|chromosome 20 open reading frame 11
hg18_v1_chr3_+_133801670_133801670	0.0261306	SOX2.p2	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1
hg18_v1_chr16_+_2746363_2746445	0.0260985	SOX2.p2	
hg18_v1_chr17_+_3993690_3993827	0.0260795	SOX2.p2	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2	AK172844|CYB5D2|124936|cytochrome b5 domain containing 2	CR600228|CYB5D2|124936|cytochrome b5 domain containing 2	BC020263|CYB5D2|124936|cytochrome b5 domain containing 2	CR621850|CYB5D2|124936|cytochrome b5 domain containing 2	CR592653|CYB5D2|124936|cytochrome b5 domain containing 2	DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2	DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2
hg18_v1_chr11_-_76862197_76862764	0.0260528	SOX2.p2	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1
hg18_v1_chr1_+_1351370_1351388	0.0260463	SOX2.p2	NM_001146685|TMEM88B|643965|transmembrane protein 88B
hg18_v1_chr16_-_67723928_67723948	0.0260371	SOX2.p2	BC018700|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg18_v1_chr1_-_85703198_85703228	0.0260223	SOX2.p2	BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1
hg18_v1_chr21_+_38550533_38550533	0.0259945	SOX2.p2	BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15
hg18_v1_chr11_+_34029764_34029814	0.0259718	SOX2.p2	BC001731|CAPRIN1|4076|cell cycle associated protein 1	NM_005898|CAPRIN1|4076|cell cycle associated protein 1	NM_203364|CAPRIN1|4076|cell cycle associated protein 1
hg18_v1_chr11_+_112337491_112337543	0.0259207	SOX2.p2	U63041|NCAM1|4684|neural cell adhesion molecule 1	AK292453|NCAM1|4684|neural cell adhesion molecule 1	EU832805|NCAM1|4684|neural cell adhesion molecule 1	GQ129418|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr7_+_80105858_80105901	0.0258304	SOX2.p2	BC008406|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr5_-_39461054_39461095	0.0258247	SOX2.p2	NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr2_-_218865451_218865547	0.0257098	SOX2.p2	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	CR603628|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1	NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1
hg18_v1_chr12_-_8656705_8656722	0.0256669	SOX2.p2	AB040431|AICDA|57379|activation-induced cytidine deaminase	BC006296|AICDA|57379|activation-induced cytidine deaminase	NM_020661|AICDA|57379|activation-induced cytidine deaminase	CR615215|AICDA|57379|activation-induced cytidine deaminase
hg18_v1_chr6_-_79844606_79844609	0.025638	SOX2.p2	BC137488|PHIP|55023|pleckstrin homology domain interacting protein	BC144670|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr2_+_44356100_44356178	0.025616	SOX2.p2	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1
hg18_v1_chr5_-_60493985_60494063	0.0255799	SOX2.p2	BC103711|C5orf43|643155|chromosome 5 open reading frame 43	BX648459|C5orf43|643155|chromosome 5 open reading frame 43	CR599620|C5orf43|643155|chromosome 5 open reading frame 43	BC066550|C5orf43|643155|chromosome 5 open reading frame 43	BX538015|C5orf43|643155|chromosome 5 open reading frame 43	AK291180|C5orf43|643155|chromosome 5 open reading frame 43	NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr13_-_44673174_44673174	0.0255742	SOX2.p2	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4	NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4
hg18_v1_chr17_-_8139330_8139468	0.0255564	SOX2.p2	BC105995|SLC25A35|399512|solute carrier family 25, member 35	BC041597|SLC25A35|399512|solute carrier family 25, member 35	BC052233|SLC25A35|399512|solute carrier family 25, member 35
hg18_v1_chr3_-_191322919_191322919	0.0255272	SOX2.p2	NM_001134418|LEPREL1|55214|leprecan-like 1
hg18_v1_chr14_+_41146513_41146522	0.0255226	SOX2.p2	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5
hg18_v1_chr6_-_25044156_25044168	0.0254422	SOX2.p2	AK299047|FAM65B|9750|family with sequence similarity 65, member B
hg18_v1_chr2_+_131229477_131229693	0.02543	SOX2.p2	AK289525|FAM123C|205147|family with sequence similarity 123C	NM_152698|FAM123C|205147|family with sequence similarity 123C	AK095696|FAM123C|205147|family with sequence similarity 123C	AK291424|FAM123C|205147|family with sequence similarity 123C	BC113445|FAM123C|205147|family with sequence similarity 123C	BC113447|FAM123C|205147|family with sequence similarity 123C	BC143806|FAM123C|205147|family with sequence similarity 123C	NM_001105193|FAM123C|205147|family with sequence similarity 123C
hg18_v1_chr10_+_104603956_104604026	0.025374	SOX2.p2	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32	NM_144591|C10orf32|119032|chromosome 10 open reading frame 32	AL832477|C10orf32|119032|chromosome 10 open reading frame 32	AK098071|C10orf32|119032|chromosome 10 open reading frame 32	BC015994|C10orf32|119032|chromosome 10 open reading frame 32	BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT read-through transcript	AK311742|C10orf32|119032|chromosome 10 open reading frame 32
hg18_v1_chr11_+_65026382_65026392	0.0253596	SOX2.p2	
hg18_v1_chr6_-_53321545_53321652	0.0253579	SOX2.p2	AK125098|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	CR597148|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr1_-_172199799_172199884	0.0253536	SOX2.p2	AK093501|RC3H1|149041|ring finger and CCCH-type domains 1
hg18_v1_chr6_+_41997212_41997278	0.0253055	SOX2.p2	CR624209|BYSL|705|bystin-like	CR600573|BYSL|705|bystin-like	CR604574|BYSL|705|bystin-like	CR590918|BYSL|705|bystin-like	CR613680|BYSL|705|bystin-like	CR621938|BYSL|705|bystin-like
hg18_v1_chr17_-_64823368_64823368	0.0252589	SOX2.p2	AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5	NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5
hg18_v1_chrX_+_18618965_18618966	0.0252112	SOX2.p2	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1	BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1
hg18_v1_chr10_+_85889164_85889311	0.0251493	SOX2.p2	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein	AK299937|GHITM|27069|growth hormone inducible transmembrane protein	AF078863|GHITM|27069|growth hormone inducible transmembrane protein	AF131820|GHITM|27069|growth hormone inducible transmembrane protein	AL136713|GHITM|27069|growth hormone inducible transmembrane protein	AF161400|GHITM|27069|growth hormone inducible transmembrane protein	AK130094|GHITM|27069|growth hormone inducible transmembrane protein	CR613304|GHITM|27069|growth hormone inducible transmembrane protein	CR618105|GHITM|27069|growth hormone inducible transmembrane protein	BC022872|GHITM|27069|growth hormone inducible transmembrane protein	AK225318|GHITM|27069|growth hormone inducible transmembrane protein	AF060923|GHITM|27069|growth hormone inducible transmembrane protein	AK098770|GHITM|27069|growth hormone inducible transmembrane protein	AK298332|GHITM|27069|growth hormone inducible transmembrane protein	BC010354|GHITM|27069|growth hormone inducible transmembrane protein	AK130097|GHITM|27069|growth hormone inducible transmembrane protein	AK297960|GHITM|27069|growth hormone inducible transmembrane protein	AK292864|GHITM|27069|growth hormone inducible transmembrane protein	AY358824|GHITM|27069|growth hormone inducible transmembrane protein	CR607970|GHITM|27069|growth hormone inducible transmembrane protein
hg18_v1_chr1_+_178867796_178868004	0.0251289	SOX2.p2	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr3_+_73128667_73128695	0.0251245	SOX2.p2	BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	CR606592|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr20_+_33506322_33506655	0.0250274	SOX2.p2	AK307861|CEP250|11190|centrosomal protein 250kDa	AF049105|CEP250|11190|centrosomal protein 250kDa	NM_007186|CEP250|11190|centrosomal protein 250kDa
hg18_v1_chr10_-_44775110_44775116	0.0250192	SOX2.p2	CR598948|LOC220980|220980|hypothetical LOC220980	CR614419|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr11_+_62189354_62189388	0.0250178	SOX2.p2	NM_001043229|METTL12|751071|methyltransferase like 12	AK297138|METTL12|751071|methyltransferase like 12	BC041359|METTL12|751071|methyltransferase like 12
hg18_v1_chr2_+_39746141_39746141	0.0249857	SOX2.p2	NM_001167959|TMEM178|130733|transmembrane protein 178
hg18_v1_chr20_-_61039672_61039702	0.0249782	SOX2.p2	BC004237|DIDO1|11083|death inducer-obliterator 1	AB002331|DIDO1|11083|death inducer-obliterator 1	AK002127|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr14_-_50068928_50069192	0.0249161	SOX2.p2	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5	U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5
hg18_v1_chr20_-_61039710_61039750	0.0248652	SOX2.p2	NM_022105|DIDO1|11083|death inducer-obliterator 1	NM_033081|DIDO1|11083|death inducer-obliterator 1	NM_080797|DIDO1|11083|death inducer-obliterator 1
hg18_v1_chr2_-_110230927_110230939	0.0247674	SOX2.p2	AK056616|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr2_-_162808123_162808290	0.0247212	SOX2.p2	BC026250|FAP|2191|fibroblast activation protein, alpha	AF007822|FAP|2191|fibroblast activation protein, alpha	U76833|FAP|2191|fibroblast activation protein, alpha	AK315448|FAP|2191|fibroblast activation protein, alpha	AK309260|FAP|2191|fibroblast activation protein, alpha	AK297118|FAP|2191|fibroblast activation protein, alpha	CR606795|FAP|2191|fibroblast activation protein, alpha	NM_004460|FAP|2191|fibroblast activation protein, alpha	U09278|FAP|2191|fibroblast activation protein, alpha
hg18_v1_chr1_-_180627023_180627300	0.0246667	SOX2.p2	NM_001033056|GLUL|2752|glutamate-ammonia ligase
hg18_v1_chr10_-_79298876_79298954	0.0246362	SOX2.p2	BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)
hg18_v1_chr1_-_13204251_13204278	0.0246135	SOX2.p2	NM_001100631|PRAMEF22|653606|PRAME family member 22	NM_001013692|PRAMEF3|401940|PRAME family member 3
hg18_v1_chr15_-_68177244_68177258	0.0245719	SOX2.p2	CR603419|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg18_v1_chr7_-_94791763_94791819	0.024563	SOX2.p2	D84371|PON1|5444|paraoxonase 1	U53784|PON1|5444|paraoxonase 1	Z70723|PON1|5444|paraoxonase 1	NM_000446|PON1|5444|paraoxonase 1
hg18_v1_chr2_-_225519974_225520022	0.0245404	SOX2.p2	EU236710|DOCK10|55619|dedicator of cytokinesis 10
hg18_v1_chr15_+_43667050_43667080	0.0245358	SOX2.p2	AK128626|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr9_+_109086154_109086220	0.0245299	SOX2.p2	AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)
hg18_v1_chr4_-_118226119_118226183	0.0245294	SOX2.p2	CR596564|TRAM1L1|133022|translocation associated membrane protein 1-like 1	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1	BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1	NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1
hg18_v1_chr14_-_34414201_34414239	0.0244724	SOX2.p2	AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr4_-_120768563_120768686	0.0244606	SOX2.p2	AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific
hg18_v1_chr9_-_35738875_35739029	0.0243997	SOX2.p2	AK027884|GBA2|57704|glucosidase, beta (bile acid) 2	AL834306|GBA2|57704|glucosidase, beta (bile acid) 2
hg18_v1_chr7_+_23252915_23252924	0.0243794	SOX2.p2	AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb	AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb	AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb	AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb	BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr20_-_1420126_1420142	0.0242761	SOX2.p2	AK297072|SIRPB2|284759|signal-regulatory protein beta 2
hg18_v1_chr9_+_5500544_5500783	0.0242759	SOX2.p2	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2	NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2	AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2	EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2	BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2
hg18_v1_chr6_-_167195647_167195790	0.0242704	SOX2.p2	NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg18_v1_chr16_-_20271530_20271537	0.024269	SOX2.p2	AK127643|UMOD|7369|uromodulin	AK055722|UMOD|7369|uromodulin	AK091961|UMOD|7369|uromodulin	AK096043|UMOD|7369|uromodulin	M15881|UMOD|7369|uromodulin	BC035975|UMOD|7369|uromodulin	AK127648|UMOD|7369|uromodulin	NM_001008389|UMOD|7369|uromodulin	NM_003361|UMOD|7369|uromodulin
hg18_v1_chr12_-_120781002_120781151	0.0242525	SOX2.p2	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase
hg18_v1_chr2_-_98713862_98713994	0.0242442	SOX2.p2	AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr2_+_160277219_160277263	0.0242087	SOX2.p2	AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7
hg18_v1_chr16_+_31632078_31632127	0.0242033	SOX2.p2	CR611323|ZNF720|124411|zinc finger protein 720	AK128671|ZNF720|124411|zinc finger protein 720	BC018134|ZNF720|124411|zinc finger protein 720
hg18_v1_chr3_-_57557906_57558115	0.0241806	SOX2.p2	AF493883|ARF4|378|ADP-ribosylation factor 4	DQ894082|ARF4|378|ADP-ribosylation factor 4	EU176202|ARF4|378|ADP-ribosylation factor 4	M36341|ARF4|378|ADP-ribosylation factor 4	CR591617|ARF4|378|ADP-ribosylation factor 4	CR611234|ARF4|378|ADP-ribosylation factor 4	CR595935|ARF4|378|ADP-ribosylation factor 4	CR597516|ARF4|378|ADP-ribosylation factor 4	CR607207|ARF4|378|ADP-ribosylation factor 4	CR611196|ARF4|378|ADP-ribosylation factor 4	CR622582|ARF4|378|ADP-ribosylation factor 4	U91920|ARF4|378|ADP-ribosylation factor 4	CR615713|ARF4|378|ADP-ribosylation factor 4	CR607867|ARF4|378|ADP-ribosylation factor 4	CR596585|ARF4|378|ADP-ribosylation factor 4	CR618819|ARF4|378|ADP-ribosylation factor 4	BC003364|ARF4|378|ADP-ribosylation factor 4	AK313008|ARF4|378|ADP-ribosylation factor 4
hg18_v1_chrX_-_20069678_20069916	0.0241552	SOX2.p2	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	CR620297|EIF1AXP1|280661|eukaryotic translation initiation factor 1A, X-linked pseudogene 1	BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked
hg18_v1_chr6_-_53321658_53321702	0.024154	SOX2.p2	AB209798|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AL136939|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC074503|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	BC067123|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr2_-_136005238_136005275	0.02415	SOX2.p2	AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3
hg18_v1_chr12_-_69289889_69289890	0.0241396	SOX2.p2	BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B
hg18_v1_chr16_+_14835214_14835308	0.0241291	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1
hg18_v1_chr17_-_70770036_70770038	0.0240971	SOX2.p2	AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg18_v1_chr12_+_53177789_53177803	0.024042	SOX2.p2	M58285|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr7_-_82630063_82630281	0.0240412	SOX2.p2	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)	NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)	AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)
hg18_v1_chr7_+_12217343_12217558	0.0240264	SOX2.p2	NM_001134232|TMEM106B|54664|transmembrane protein 106B	NM_018374|TMEM106B|54664|transmembrane protein 106B	AK311651|TMEM106B|54664|transmembrane protein 106B	AK002135|TMEM106B|54664|transmembrane protein 106B	BC033901|TMEM106B|54664|transmembrane protein 106B	BC028108|TMEM106B|54664|transmembrane protein 106B	CR624005|TMEM106B|54664|transmembrane protein 106B	BC039741|TMEM106B|54664|transmembrane protein 106B	AK223263|TMEM106B|54664|transmembrane protein 106B
hg18_v1_chr5_-_150264486_150264566	0.0240192	SOX2.p2	BC117248|ZNF300|91975|zinc finger protein 300	BC032607|ZNF300|91975|zinc finger protein 300	DQ908918|ZNF300|91975|zinc finger protein 300
hg18_v1_chr12_-_104002348_104002542	0.0239024	SOX2.p2	EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2	NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2
hg18_v1_chr8_-_18915443_18915690	0.0238771	SOX2.p2	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3	NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3
hg18_v1_chr1_+_42773146_42773146	0.0237812	SOX2.p2	NM_001080850|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr7_+_103756339_103756570	0.0237293	SOX2.p2	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3
hg18_v1_chr13_-_50315832_50316075	0.0237165	SOX2.p2	AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7	BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7	NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7	AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7
hg18_v1_chr13_+_32488477_32488570	0.0236951	SOX2.p2	AB005142|KL|9365|klotho	NM_004795|KL|9365|klotho
hg18_v1_chr7_+_116380590_116380653	0.0236589	SOX2.p2	BC075855|ST7|7982|suppression of tumorigenicity 7	NM_018412|ST7|7982|suppression of tumorigenicity 7	NM_021908|ST7|7982|suppression of tumorigenicity 7	AF234882|ST7|7982|suppression of tumorigenicity 7	AF234883|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr15_+_38240501_38240542	0.0235951	SOX2.p2	NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)
hg18_v1_chr14_+_64948332_64948414	0.0235784	SOX2.p2	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg18_v1_chr6_-_31618203_31618203	0.0235454	SOX2.p2	NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
hg18_v1_chr8_-_72437020_72437039	0.0234832	SOX2.p2	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)	NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)
hg18_v1_chr5_-_41546384_41546486	0.0234119	SOX2.p2	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg18_v1_chr1_-_156635879_156635879	0.023356	SOX2.p2	NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2
hg18_v1_chr5_+_15553768_15553785	0.0232899	SOX2.p2	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7
hg18_v1_chr3_-_87122958_87122962	0.0232785	SOX2.p2	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)
hg18_v1_chr1_+_182040837_182040991	0.0232429	SOX2.p2	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1	AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1
hg18_v1_chr5_-_98290117_98290139	0.023234	SOX2.p2	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1	BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1	NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1	AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1
hg18_v1_chr8_-_94046891_94046992	0.0231848	SOX2.p2	AK096398|C8orf83|286144|chromosome 8 open reading frame 83	NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83
hg18_v1_chr10_+_70650064_70650110	0.0231837	SOX2.p2	AK095086|HKDC1|80201|hexokinase domain containing 1	NM_025130|HKDC1|80201|hexokinase domain containing 1	BC110505|HKDC1|80201|hexokinase domain containing 1	BC110504|HKDC1|80201|hexokinase domain containing 1	AK291024|HKDC1|80201|hexokinase domain containing 1	BC069201|HKDC1|80201|hexokinase domain containing 1
hg18_v1_chr16_+_75790849_75790876	0.0231625	SOX2.p2	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like
hg18_v1_chr22_+_28609201_28609321	0.0231194	SOX2.p2	BC142713|MTMR3|8897|myotubularin related protein 3	AB002369|MTMR3|8897|myotubularin related protein 3	BC152455|MTMR3|8897|myotubularin related protein 3
hg18_v1_chr11_+_7229717_7229822	0.0230822	SOX2.p2	BC046367|SYT9|143425|synaptotagmin IX	NM_175733|SYT9|143425|synaptotagmin IX	AK315013|SYT9|143425|synaptotagmin IX
hg18_v1_chr2_+_12775336_12775398	0.0230749	SOX2.p2	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)	BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)
hg18_v1_chr1_-_149213778_149213809	0.0230601	SOX2.p2	AK290989|LASS2|29956|LAG1 homolog, ceramide synthase 2	BC001357|LASS2|29956|LAG1 homolog, ceramide synthase 2
hg18_v1_chr1_+_178867787_178867795	0.0230441	SOX2.p2	BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr19_-_15451203_15451316	0.0229578	SOX2.p2	BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2	BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2	BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2	AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2	AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2	AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2	AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2	AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2	NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2
hg18_v1_chr14_-_21074875_21075176	0.0229043	SOX2.p2	AK293574|SALL2|6297|sal-like 2 (Drosophila)	AK001276|SALL2|6297|sal-like 2 (Drosophila)	BC136528|SALL2|6297|sal-like 2 (Drosophila)	BC136529|SALL2|6297|sal-like 2 (Drosophila)	AK299931|SALL2|6297|sal-like 2 (Drosophila)	X98834|SALL2|6297|sal-like 2 (Drosophila)	AB002358|SALL2|6297|sal-like 2 (Drosophila)	NM_005407|SALL2|6297|sal-like 2 (Drosophila)
hg18_v1_chr7_-_148356697_148356714	0.0228741	SOX2.p2	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr1_-_33585848_33585919	0.0228378	SOX2.p2	
hg18_v1_chr1_-_199742589_199742589	0.0227434	SOX2.p2	AK290133|CSRP1|1465|cysteine and glycine-rich protein 1	NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1
hg18_v1_chr5_-_60493903_60493967	0.0227411	SOX2.p2	BC146876|C5orf43|643155|chromosome 5 open reading frame 43	BC146881|C5orf43|643155|chromosome 5 open reading frame 43	BC014242|C5orf43|643155|chromosome 5 open reading frame 43	BC047489|C5orf43|643155|chromosome 5 open reading frame 43
hg18_v1_chr19_+_11859609_11859738	0.0227238	SOX2.p2	BC051309|ZNF69|7620|zinc finger protein 69	NM_021915|ZNF69|7620|zinc finger protein 69	EU446913|ZNF69|7620|zinc finger protein 69
hg18_v1_chr6_-_75972473_75972528	0.0227143	SOX2.p2	AK307558|COL12A1|1303|collagen, type XII, alpha 1
hg18_v1_chr1_+_43628136_43628170	0.0227079	SOX2.p2	BC017576|C1orf84|149469|chromosome 1 open reading frame 84	NM_001012961|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr3_-_71262405_71262422	0.0226617	SOX2.p2	AK027264|FOXP1|27086|forkhead box P1
hg18_v1_chr4_+_83570749_83570788	0.0225241	SOX2.p2	NM_021204|ENOPH1|58478|enolase-phosphatase 1	AF087881|ENOPH1|58478|enolase-phosphatase 1	AF113125|ENOPH1|58478|enolase-phosphatase 1
hg18_v1_chr12_+_6473519_6473535	0.022511	SOX2.p2	AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2	AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2
hg18_v1_chr20_-_33658823_33658850	0.0225095	SOX2.p2	BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene	AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene
hg18_v1_chr3_+_25444753_25444805	0.0224905	SOX2.p2	AF157483|RARB|5915|retinoic acid receptor, beta	NM_016152|RARB|5915|retinoic acid receptor, beta	CR621137|RARB|5915|retinoic acid receptor, beta
hg18_v1_chr11_+_89032112_89032112	0.0222631	SOX2.p2	AF261715|FOLH1B|219595|folate hydrolase 1B	NM_153696|FOLH1B|219595|folate hydrolase 1B
hg18_v1_chr9_-_98368913_98369023	0.0222456	SOX2.p2	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)
hg18_v1_chr6_-_31882704_31882744	0.0222443	SOX2.p2	AF196468|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	CR601536|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	BC009192|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	NM_021177|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AF136977|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	AJ245416|LSM2|57819|LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg18_v1_chr3_+_42952855_42952887	0.0222381	SOX2.p2	BC062786|KRBOX1|100506243|KRAB box domain containing 1	AK130974|KRBOX1|100506243|KRAB box domain containing 1
hg18_v1_chr6_-_26305456_26305495	0.022217	SOX2.p2	DQ892795|HIST1H3D|8351|histone cluster 1, H3d	DQ896042|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr11_+_117680504_117680877	0.0221725	SOX2.p2	NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR591071|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR609568|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)	CR610563|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)
hg18_v1_chr5_+_94916533_94916738	0.0221401	SOX2.p2	AK303855|ARSK|153642|arylsulfatase family, member K	AK316253|ARSK|153642|arylsulfatase family, member K	NM_198150|ARSK|153642|arylsulfatase family, member K	AY358596|ARSK|153642|arylsulfatase family, member K	BC050392|ARSK|153642|arylsulfatase family, member K	BC130329|ARSK|153642|arylsulfatase family, member K	BC144160|ARSK|153642|arylsulfatase family, member K	BC144161|ARSK|153642|arylsulfatase family, member K	BC036047|ARSK|153642|arylsulfatase family, member K	AY875939|ARSK|153642|arylsulfatase family, member K
hg18_v1_chr1_+_78888064_78888120	0.0221274	SOX2.p2	NM_006417|IFI44|10561|interferon-induced protein 44	BC022870|IFI44|10561|interferon-induced protein 44	AK302527|IFI44|10561|interferon-induced protein 44	AK316476|IFI44|10561|interferon-induced protein 44	CR621445|IFI44|10561|interferon-induced protein 44
hg18_v1_chr7_-_143622233_143622296	0.0221247	SOX2.p2	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg18_v1_chr13_-_34948758_34948835	0.0221087	SOX2.p2	BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)	CR624056|MAB21L1|4081|mab-21-like 1 (C. elegans)	AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)	AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)	NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)
hg18_v1_chrX_-_140164294_140164313	0.0220568	SOX2.p2	AJ238277|SPANXC|64663|SPANX family, member C	NM_022661|SPANXC|64663|SPANX family, member C	BC054023|SPANXC|64663|SPANX family, member C	AK225988|SPANXC|64663|SPANX family, member C
hg18_v1_chr5_+_137701855_137701909	0.0220427	SOX2.p2	BC000259|FAM53C|51307|family with sequence similarity 53, member C	AF251040|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr11_+_118394350_118394450	0.0220412	SOX2.p2	CR616613|TRAPPC4|51399|trafficking protein particle complex 4	CR591716|TRAPPC4|51399|trafficking protein particle complex 4	AF078862|TRAPPC4|51399|trafficking protein particle complex 4	AF105025|TRAPPC4|51399|trafficking protein particle complex 4	AF151862|TRAPPC4|51399|trafficking protein particle complex 4	NM_016146|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr3_-_188339882_188340018	0.0219956	SOX2.p2	L05096|RPL39L|116832|ribosomal protein L39-like	AB063610|RPL39L|116832|ribosomal protein L39-like	BC012328|RPL39L|116832|ribosomal protein L39-like	NM_052969|RPL39L|116832|ribosomal protein L39-like	CR603001|RPL39L|116832|ribosomal protein L39-like
hg18_v1_chr22_-_20314274_20314356	0.0219249	SOX2.p2	CR596616|YDJC|150223|YdjC homolog (bacterial)	CR597037|YDJC|150223|YdjC homolog (bacterial)	BC064568|YDJC|150223|YdjC homolog (bacterial)	CR590781|YDJC|150223|YdjC homolog (bacterial)	CR613078|YDJC|150223|YdjC homolog (bacterial)	CR614195|YDJC|150223|YdjC homolog (bacterial)	CR618402|YDJC|150223|YdjC homolog (bacterial)	BC053663|YDJC|150223|YdjC homolog (bacterial)	BC017281|YDJC|150223|YdjC homolog (bacterial)	CR620409|YDJC|150223|YdjC homolog (bacterial)	CR624561|YDJC|150223|YdjC homolog (bacterial)	BC110075|YDJC|150223|YdjC homolog (bacterial)	BC110799|YDJC|150223|YdjC homolog (bacterial)	CR613432|YDJC|150223|YdjC homolog (bacterial)	BC057814|YDJC|150223|YdjC homolog (bacterial)	NM_001017964|YDJC|150223|YdjC homolog (bacterial)	CR600451|YDJC|150223|YdjC homolog (bacterial)	BC096754|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chr7_+_80105907_80105971	0.0218947	SOX2.p2	CR606551|CD36|948|CD36 molecule (thrombospondin receptor)	CR623153|CD36|948|CD36 molecule (thrombospondin receptor)	CR598434|CD36|948|CD36 molecule (thrombospondin receptor)	M98398|CD36|948|CD36 molecule (thrombospondin receptor)	M98399|CD36|948|CD36 molecule (thrombospondin receptor)	M24795|CD36|948|CD36 molecule (thrombospondin receptor)
hg18_v1_chr9_-_16717887_16717908	0.0218501	SOX2.p2	AY438376|BNC2|54796|basonuclin 2
hg18_v1_chr1_+_227506751_227506751	0.0218422	SOX2.p2	BC107681|SPHAR|10638|S-phase response (cyclin related)	NM_006542|SPHAR|10638|S-phase response (cyclin related)
hg18_v1_chr10_-_21854616_21854616	0.0218017	SOX2.p2	AK131456|C10orf140|387640|chromosome 10 open reading frame 140	NM_207371|C10orf140|387640|chromosome 10 open reading frame 140
hg18_v1_chr9_+_35528628_35528628	0.0217874	SOX2.p2	NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr7_+_27746334_27746334	0.0217778	SOX2.p2	
hg18_v1_chr5_+_88220846_88220907	0.0217311	SOX2.p2	
hg18_v1_chr2_-_108972100_108972259	0.0216712	SOX2.p2	AK313781|EDAR|10913|ectodysplasin A receptor	CR749352|EDAR|10913|ectodysplasin A receptor	AF130988|EDAR|10913|ectodysplasin A receptor	NM_022336|EDAR|10913|ectodysplasin A receptor
hg18_v1_chr3_+_45705918_45705961	0.021617	SOX2.p2	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)
hg18_v1_chr6_-_112682573_112682604	0.0216072	SOX2.p2	BC066552|LAMA4|3910|laminin, alpha 4
hg18_v1_chr19_-_2691009_2691047	0.0215742	SOX2.p2	AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	CR618109|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg18_v1_chr2_-_210744158_210744432	0.0215201	SOX2.p2	BC126155|C2orf67|151050|chromosome 2 open reading frame 67	BC143914|C2orf67|151050|chromosome 2 open reading frame 67	BC032837|C2orf67|151050|chromosome 2 open reading frame 67	NM_152519|C2orf67|151050|chromosome 2 open reading frame 67	AK308432|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr2_-_178461710_178461711	0.0214964	SOX2.p2	AJ251509|PDE11A|50940|phosphodiesterase 11A	NM_001077196|PDE11A|50940|phosphodiesterase 11A
hg18_v1_chr16_-_47872973_47873029	0.0214413	SOX2.p2	BC093692|CBLN1|869|cerebellin 1 precursor	BC093718|CBLN1|869|cerebellin 1 precursor
hg18_v1_chr14_-_69896146_69896200	0.021439	SOX2.p2	AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg18_v1_chr13_-_102517196_102517196	0.0214089	SOX2.p2	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2	U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2
hg18_v1_chr20_+_19818209_19818245	0.0213818	SOX2.p2	BC128065|RIN2|54453|Ras and Rab interactor 2	NM_018993|RIN2|54453|Ras and Rab interactor 2	AB060339|RIN2|54453|Ras and Rab interactor 2
hg18_v1_chr3_-_180452338_180452338	0.021359	SOX2.p2	NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg18_v1_chr12_-_10142779_10142930	0.0213494	SOX2.p2	CR606141|CLEC1A|51267|C-type lectin domain family 1, member A	CR598502|CLEC1A|51267|C-type lectin domain family 1, member A	DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A	DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A	CR614400|CLEC1A|51267|C-type lectin domain family 1, member A	AK300979|CLEC1A|51267|C-type lectin domain family 1, member A	AK291584|CLEC1A|51267|C-type lectin domain family 1, member A	CR619172|CLEC1A|51267|C-type lectin domain family 1, member A	CR591145|CLEC1A|51267|C-type lectin domain family 1, member A	CR591231|CLEC1A|51267|C-type lectin domain family 1, member A	BC039072|CLEC1A|51267|C-type lectin domain family 1, member A	CR604680|CLEC1A|51267|C-type lectin domain family 1, member A	AK313589|CLEC1A|51267|C-type lectin domain family 1, member A	AK075114|CLEC1A|51267|C-type lectin domain family 1, member A	BC067746|CLEC1A|51267|C-type lectin domain family 1, member A	AF200949|CLEC1A|51267|C-type lectin domain family 1, member A	NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A	AK091989|CLEC1A|51267|C-type lectin domain family 1, member A	AY358587|CLEC1A|51267|C-type lectin domain family 1, member A
hg18_v1_chr13_+_51484517_51484561	0.0213054	SOX2.p2	NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	CR602797|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)
hg18_v1_chr5_+_52320660_52321094	0.021282	SOX2.p2	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg18_v1_chr2_+_190357354_190357536	0.0212613	SOX2.p2	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
hg18_v1_chr3_-_167037861_167037914	0.0212093	SOX2.p2	M16474|BCHE|590|butyrylcholinesterase	BC018141|BCHE|590|butyrylcholinesterase	BC008396|BCHE|590|butyrylcholinesterase	AK292063|BCHE|590|butyrylcholinesterase	CR611139|BCHE|590|butyrylcholinesterase	M16541|BCHE|590|butyrylcholinesterase
hg18_v1_chr1_+_178867744_178867777	0.0211743	SOX2.p2	BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr3_+_73128629_73128665	0.0211715	SOX2.p2	AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2
hg18_v1_chr11_+_4799126_4799191	0.0211076	SOX2.p2	BC136877|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2	NM_001004753|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2
hg18_v1_chr1_+_178867780_178867784	0.0211009	SOX2.p2	AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1
hg18_v1_chr1_-_183392776_183392847	0.0210509	SOX2.p2	AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like
hg18_v1_chr7_+_149651481_149651537	0.0210407	SOX2.p2	BC001354|LRRC61|65999|leucine rich repeat containing 61
hg18_v1_chr3_+_179759181_179759311	0.0210025	SOX2.p2	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2	NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg18_v1_chr2_-_233349469_233349518	0.0209994	SOX2.p2	AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13	NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13
hg18_v1_chr1_+_357502_357521	0.0209828	SOX2.p2	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29	NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3	NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16
hg18_v1_chr5_-_78318112_78318112	0.0209668	SOX2.p2	NM_000046|ARSB|411|arylsulfatase B
hg18_v1_chr15_+_57067141_57067157	0.0209425	SOX2.p2	BC060862|RNF111|54778|ring finger protein 111	BX538130|RNF111|54778|ring finger protein 111	NM_017610|RNF111|54778|ring finger protein 111
hg18_v1_chr1_-_203985780_203985850	0.0209217	SOX2.p2	AK025133|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AK225228|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	AJ012584|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr1_+_53253161_53253201	0.0209086	SOX2.p2	M55421|SCP2|6342|sterol carrier protein 2	NM_001007099|SCP2|6342|sterol carrier protein 2	NM_001007100|SCP2|6342|sterol carrier protein 2	NM_001007250|SCP2|6342|sterol carrier protein 2	S52450|SCP2|6342|sterol carrier protein 2
hg18_v1_chr1_+_224317036_224317043	0.0208959	SOX2.p2	D28384|H3F3A|3020|H3 histone, family 3A	NM_002107|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr1_+_229731021_229731088	0.0208426	SOX2.p2	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 read-through gene	NM_005999|TSNAX|7257|translin-associated factor X	X95073|TSNAX|7257|translin-associated factor X	BC011797|TSNAX|7257|translin-associated factor X	BC010376|TSNAX|7257|translin-associated factor X	AK313068|TSNAX|7257|translin-associated factor X
hg18_v1_chr15_+_38673734_38673778	0.0208297	SOX2.p2	AB022190|CASC5|57082|cancer susceptibility candidate 5	BC014306|CASC5|57082|cancer susceptibility candidate 5	NM_144508|CASC5|57082|cancer susceptibility candidate 5	NM_170589|CASC5|57082|cancer susceptibility candidate 5	AK307605|CASC5|57082|cancer susceptibility candidate 5	AK307996|CASC5|57082|cancer susceptibility candidate 5	AF248041|CASC5|57082|cancer susceptibility candidate 5	AF461041|CASC5|57082|cancer susceptibility candidate 5	BC029373|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr5_+_152850276_152850641	0.0206444	SOX2.p2	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1
hg18_v1_chr2_-_110230642_110230746	0.0205945	SOX2.p2	U17077|MALL|7851|mal, T-cell differentiation protein-like	DQ892870|MALL|7851|mal, T-cell differentiation protein-like	DQ896118|MALL|7851|mal, T-cell differentiation protein-like	BC003179|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr12_-_30740011_30740064	0.0204727	SOX2.p2	U77494|IPO8|10526|importin 8
hg18_v1_chr4_+_120167264_120167303	0.0204679	SOX2.p2	BX647849|SYNPO2|171024|synaptopodin 2
hg18_v1_chr7_+_116289833_116289911	0.0204591	SOX2.p2	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR607571|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR614626|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR613439|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR590988|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR596187|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR602265|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR601522|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR603366|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr1_+_67923660_67923673	0.0204584	SOX2.p2	CR612467|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha
hg18_v1_chr22_+_21852551_21852690	0.0204468	SOX2.p2	NM_004327|BCR|613|breakpoint cluster region	NM_021574|BCR|613|breakpoint cluster region	Y00661|BCR|613|breakpoint cluster region
hg18_v1_chr1_+_221633337_221633440	0.0204317	SOX2.p2	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65	AK093047|C1orf65|164127|chromosome 1 open reading frame 65	BC031066|C1orf65|164127|chromosome 1 open reading frame 65	BC030026|C1orf65|164127|chromosome 1 open reading frame 65
hg18_v1_chr8_-_8788149_8788547	0.0204242	SOX2.p2	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1
hg18_v1_chr11_-_67198662_67198752	0.0202743	SOX2.p2	AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2
hg18_v1_chr4_+_37131946_37131994	0.0202212	SOX2.p2	NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19	BC037906|C4orf19|55286|chromosome 4 open reading frame 19
hg18_v1_chr14_-_88090641_88091251	0.02022	SOX2.p2	NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21
hg18_v1_chr17_+_38576707_38576790	0.0202158	SOX2.p2	AK299328|NBR1|4077|neighbor of BRCA1 gene 1	AK290005|NBR1|4077|neighbor of BRCA1 gene 1	AK297425|NBR1|4077|neighbor of BRCA1 gene 1	X76952|NBR1|4077|neighbor of BRCA1 gene 1	NM_005899|NBR1|4077|neighbor of BRCA1 gene 1	BC009808|NBR1|4077|neighbor of BRCA1 gene 1	AY450308|NBR1|4077|neighbor of BRCA1 gene 1
hg18_v1_chr6_+_74228331_74228424	0.0201463	SOX2.p2	AL833823|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)
hg18_v1_chr5_-_78845414_78845455	0.0201151	SOX2.p2	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)	NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)
hg18_v1_chr1_-_84237316_84237453	0.019835	SOX2.p2	AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7
hg18_v1_chr14_+_72672921_72672946	0.0198271	SOX2.p2	L42110|PSEN1|5663|presenilin 1
hg18_v1_chr6_-_10802823_10802824	0.0197523	SOX2.p2	BC016820|C6orf52|347744|chromosome 6 open reading frame 52	NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52
hg18_v1_chr1_+_87566738_87566752	0.0197279	SOX2.p2	NM_006769|LMO4|8543|LIM domain only 4	U24576|LMO4|8543|LIM domain only 4
hg18_v1_chr2_-_190357241_190357317	0.0197142	SOX2.p2	CR620006|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr2_+_72968009_72968068	0.0196757	SOX2.p2	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)	DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)
hg18_v1_chr20_+_17622319_17622319	0.0196737	SOX2.p2	NM_001159495|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr12_+_53177806_53177812	0.019633	SOX2.p2	BC093769|NCKAP1L|3071|NCK-associated protein 1-like	BC093771|NCKAP1L|3071|NCK-associated protein 1-like	BC143355|NCKAP1L|3071|NCK-associated protein 1-like
hg18_v1_chr2_+_130453704_130453706	0.0195201	SOX2.p2	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family	AL136727|RAB6C|84084|RAB6C, member RAS oncogene family
hg18_v1_chr2_+_206732859_206732948	0.0195126	SOX2.p2	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR612393|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR596342|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR605644|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR626685|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2
hg18_v1_chr1_-_203985701_203985724	0.0194739	SOX2.p2	CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg18_v1_chr2_+_234490781_234490788	0.0194662	SOX2.p2	AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8	BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8
hg18_v1_chr7_-_50485515_50485581	0.0194583	SOX2.p2	BC051867|FIGNL1|63979|fidgetin-like 1	AK308136|FIGNL1|63979|fidgetin-like 1	AK023142|FIGNL1|63979|fidgetin-like 1	AK027537|FIGNL1|63979|fidgetin-like 1	NM_001042762|FIGNL1|63979|fidgetin-like 1	NM_022116|FIGNL1|63979|fidgetin-like 1
hg18_v1_chr2_-_85494639_85494656	0.0194406	SOX2.p2	AK313898|CAPG|822|capping protein (actin filament), gelsolin-like	AK300507|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr7_+_93862137_93862278	0.0194288	SOX2.p2	AK297786|COL1A2|1278|collagen, type I, alpha 2	AK223175|COL1A2|1278|collagen, type I, alpha 2	AK300194|COL1A2|1278|collagen, type I, alpha 2	Z74616|COL1A2|1278|collagen, type I, alpha 2	AK226074|COL1A2|1278|collagen, type I, alpha 2	BC042586|COL1A2|1278|collagen, type I, alpha 2	BC054498|COL1A2|1278|collagen, type I, alpha 2	AF221550|PLAG1|5324|pleiomorphic adenoma gene 1	Y00724|COL1A2|1278|collagen, type I, alpha 2
hg18_v1_chr2_-_85494664_85494690	0.0193826	SOX2.p2	CR607458|CAPG|822|capping protein (actin filament), gelsolin-like	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like
hg18_v1_chr20_-_49612574_49612574	0.0193776	SOX2.p2	EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg18_v1_chr22_+_21852911_21853187	0.0193339	SOX2.p2	X06418|BCR|613|breakpoint cluster region	EU216058|BCR|613|breakpoint cluster region	EU216059|BCR|613|breakpoint cluster region	EU216061|BCR|613|breakpoint cluster region	EU216062|BCR|613|breakpoint cluster region	EU216063|BCR|613|breakpoint cluster region	EU216064|BCR|613|breakpoint cluster region	EU216067|BCR|613|breakpoint cluster region	EU216069|BCR|613|breakpoint cluster region	EU216070|BCR|613|breakpoint cluster region
hg18_v1_chr5_+_176492662_176492685	0.0193224	SOX2.p2	NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1
hg18_v1_chr12_+_43896134_43896142	0.0193197	SOX2.p2	AK302819|ANO6|196527|anoctamin 6	NM_001142680|ANO6|196527|anoctamin 6
hg18_v1_chr1_-_165754325_165754470	0.0193102	SOX2.p2	DQ893778|CD247|919|CD247 molecule	EU176191|CD247|919|CD247 molecule	CR625818|CD247|919|CD247 molecule	X55510|CD247|919|CD247 molecule	X55511|CD247|919|CD247 molecule	X55512|CD247|919|CD247 molecule	CR601423|CD247|919|CD247 molecule	CR615998|CD247|919|CD247 molecule	BC025703|CD247|919|CD247 molecule	AK128376|CD247|919|CD247 molecule	AK313946|CD247|919|CD247 molecule	J04132|CD247|919|CD247 molecule	AK223325|CD247|919|CD247 molecule	NM_000734|CD247|919|CD247 molecule	NM_198053|CD247|919|CD247 molecule
hg18_v1_chr5_+_137701852_137701854	0.0192671	SOX2.p2	AK027412|FAM53C|51307|family with sequence similarity 53, member C	AK310378|FAM53C|51307|family with sequence similarity 53, member C	AK315567|FAM53C|51307|family with sequence similarity 53, member C
hg18_v1_chr13_-_29938029_29938081	0.0192459	SOX2.p2	CR592109|HMGB1|3146|high-mobility group box 1	CR607900|HMGB1|3146|high-mobility group box 1	AK057120|HMGB1|3146|high-mobility group box 1	AK310975|HMGB1|3146|high-mobility group box 1	CR600442|HMGB1|3146|high-mobility group box 1	CR601960|HMGB1|3146|high-mobility group box 1	CR591935|HMGB1|3146|high-mobility group box 1	AK291494|HMGB1|3146|high-mobility group box 1	AK304506|HMGB1|3146|high-mobility group box 1	NM_002128|HMGB1|3146|high-mobility group box 1
hg18_v1_chr20_+_58004811_58004823	0.0192045	SOX2.p2	BC062570|CDH26|60437|cadherin 26	NM_021810|CDH26|60437|cadherin 26	AK074477|CDH26|60437|cadherin 26
hg18_v1_chr6_+_39868770_39868843	0.0191138	SOX2.p2	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2	AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2	BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2
hg18_v1_chr19_+_11327173_11327218	0.0191052	SOX2.p2	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2	BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2
hg18_v1_chr14_-_23847024_23847028	0.019072	SOX2.p2	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr4_+_134292630_134292837	0.019027	SOX2.p2	AK024636|PCDH10|57575|protocadherin 10	CR625417|PCDH10|57575|protocadherin 10	AL157470|PCDH10|57575|protocadherin 10
hg18_v1_chr2_+_39746525_39746618	0.0190081	SOX2.p2	NM_152390|TMEM178|130733|transmembrane protein 178	AK075440|TMEM178|130733|transmembrane protein 178	CR597741|TMEM178|130733|transmembrane protein 178	BC029530|TMEM178|130733|transmembrane protein 178	AY358773|TMEM178|130733|transmembrane protein 178	DQ890996|TMEM178|130733|transmembrane protein 178
hg18_v1_chrX_-_76928142_76928232	0.0190078	SOX2.p2	AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked
hg18_v1_chr10_+_44775155_44775321	0.018937	SOX2.p2	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4
hg18_v1_chr5_+_40945374_40945430	0.0189113	SOX2.p2	BC063851|C7|730|complement component 7	AK304848|C7|730|complement component 7	AK312737|C7|730|complement component 7
hg18_v1_chr7_+_73709974_73709987	0.018897	SOX2.p2	BC070484|GTF2I|2969|general transcription factor IIi
hg18_v1_chr17_-_36594652_36594672	0.0188537	SOX2.p2	BC103845|KRTAP4-1|85285|keratin associated protein 4-1	BC103846|KRTAP4-1|85285|keratin associated protein 4-1	AJ406942|KRTAP4-1|85285|keratin associated protein 4-1	NM_033060|KRTAP4-1|85285|keratin associated protein 4-1
hg18_v1_chr7_-_105304159_105304283	0.0188368	SOX2.p2	AK095475|ATXN7L1|222255|ataxin 7-like 1	AK097574|ATXN7L1|222255|ataxin 7-like 1	BC030616|ATXN7L1|222255|ataxin 7-like 1	NM_020725|ATXN7L1|222255|ataxin 7-like 1	NM_152749|ATXN7L1|222255|ataxin 7-like 1
hg18_v1_chr7_+_102502816_102502845	0.0188131	SOX2.p2	AK075500|ARMC10|83787|armadillo repeat containing 10	CR613788|ARMC10|83787|armadillo repeat containing 10	AK301565|ARMC10|83787|armadillo repeat containing 10	AK225082|ARMC10|83787|armadillo repeat containing 10	AK291818|ARMC10|83787|armadillo repeat containing 10	BC003586|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr7_+_102340579_102340757	0.0188092	SOX2.p2	NM_001031692|LRRC17|10234|leucine rich repeat containing 17	NM_005824|LRRC17|10234|leucine rich repeat containing 17	AK226021|LRRC17|10234|leucine rich repeat containing 17	AK225701|LRRC17|10234|leucine rich repeat containing 17	U32907|LRRC17|10234|leucine rich repeat containing 17	AK290305|LRRC17|10234|leucine rich repeat containing 17	BC027903|LRRC17|10234|leucine rich repeat containing 17	AY358889|LRRC17|10234|leucine rich repeat containing 17
hg18_v1_chr18_+_74930398_74930477	0.0188055	SOX2.p2	BC053561|ATP9B|374868|ATPase, class II, type 9B
hg18_v1_chr3_+_4510030_4510033	0.0187795	SOX2.p2	NM_001099952|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_001168272|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	NM_002222|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1	AK311008|ITPR1|3708|inositol 1,4,5-triphosphate receptor, type 1
hg18_v1_chr12_-_105165805_105166150	0.0187745	SOX2.p2	BC067357|CKAP4|10970|cytoskeleton-associated protein 4	BC082972|CKAP4|10970|cytoskeleton-associated protein 4	NM_006825|CKAP4|10970|cytoskeleton-associated protein 4	X69910|CKAP4|10970|cytoskeleton-associated protein 4	BC094824|CKAP4|10970|cytoskeleton-associated protein 4	BC037578|CKAP4|10970|cytoskeleton-associated protein 4	AK223563|CKAP4|10970|cytoskeleton-associated protein 4	AK123693|CKAP4|10970|cytoskeleton-associated protein 4	BC025341|CKAP4|10970|cytoskeleton-associated protein 4
hg18_v1_chr5_+_137716169_137716190	0.0186379	SOX2.p2	AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B	NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B
hg18_v1_chr5_-_127901633_127901848	0.0186319	SOX2.p2	NM_001999|FBN2|2201|fibrillin 2	AF193046|FBN2|2201|fibrillin 2	CR612828|FBN2|2201|fibrillin 2
hg18_v1_chr11_-_95715976_95716126	0.0185123	SOX2.p2	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)	AY040322|MAML2|84441|mastermind-like 2 (Drosophila)	BC152449|MAML2|84441|mastermind-like 2 (Drosophila)	NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)	AK308157|MAML2|84441|mastermind-like 2 (Drosophila)
hg18_v1_chr9_+_116389814_116389911	0.0184746	SOX2.p2	NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR617444|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	CR607789|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg18_v1_chr12_+_43972732_43972732	0.0183956	SOX2.p2	AL832340|ANO6|196527|anoctamin 6	NM_001142678|ANO6|196527|anoctamin 6
hg18_v1_chr1_+_50347188_50347355	0.0183448	SOX2.p2	AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	CR613627|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr4_+_25266532_25266584	0.0183418	SOX2.p2	NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2
hg18_v1_chr5_+_128823904_128824001	0.0183039	SOX2.p2	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19	NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19
hg18_v1_chr15_-_48434641_48434653	0.0182689	SOX2.p2	U13045|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13046|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13047|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	U13048|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr5_+_99899133_99899205	0.0182385	SOX2.p2	AF529367|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr1_-_115060857_115060884	0.0182158	SOX2.p2	CR615916|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog	CR595772|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog	CR598435|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog
hg18_v1_chr7_+_142850667_142850667	0.0181834	SOX2.p2	BC100938|TAS2R60|338398|taste receptor, type 2, member 60	BC100939|TAS2R60|338398|taste receptor, type 2, member 60	BC100940|TAS2R60|338398|taste receptor, type 2, member 60	BC100941|TAS2R60|338398|taste receptor, type 2, member 60	NM_177437|TAS2R60|338398|taste receptor, type 2, member 60
hg18_v1_chr20_+_31783426_31783488	0.0181646	SOX2.p2	BC132873|ZNF341|84905|zinc finger protein 341	BC144188|ZNF341|84905|zinc finger protein 341	BC157823|ZNF341|84905|zinc finger protein 341	BC146811|ZNF341|84905|zinc finger protein 341	BC094738|ZNF341|84905|zinc finger protein 341	NM_032819|ZNF341|84905|zinc finger protein 341	BC063492|ZNF341|84905|zinc finger protein 341	BC040440|ZNF341|84905|zinc finger protein 341
hg18_v1_chr18_-_42751305_42751518	0.0181146	SOX2.p2	AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2	AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2	DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2	EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2	AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2	BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2	BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2	NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2
hg18_v1_chr11_+_93394025_93394025	0.0181009	SOX2.p2	NM_001098672|HEPHL1|341208|hephaestin-like 1
hg18_v1_chr1_+_198449278_198449278	0.0180887	SOX2.p2	NM_001105517|FAM58B|339521|family with sequence similarity 58, member B
hg18_v1_chr1_+_118273887_118273916	0.0180237	SOX2.p2	NM_006784|WDR3|10885|WD repeat domain 3	AK292438|WDR3|10885|WD repeat domain 3	AF083217|WDR3|10885|WD repeat domain 3
hg18_v1_chr7_-_44854188_44854200	0.0179726	SOX2.p2	AK023973|H2AFV|94239|H2A histone family, member V
hg18_v1_chr1_+_86943074_86943100	0.0179647	SOX2.p2	AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1
hg18_v1_chr8_+_32698892_32698977	0.0179495	SOX2.p2	NM_001159996|NRG1|3084|neuregulin 1	AK293270|NRG1|3084|neuregulin 1	AK293240|NRG1|3084|neuregulin 1
hg18_v1_chr5_+_86599800_86599845	0.0178621	SOX2.p2	AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1
hg18_v1_chr3_+_143824955_143825033	0.017813	SOX2.p2	NM_002670|PLS1|5357|plastin 1	L20826|PLS1|5357|plastin 1
hg18_v1_chr16_+_49333461_49333510	0.0178026	SOX2.p2	NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)	NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)	AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)	AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)
hg18_v1_chr8_+_70567581_70567605	0.0178022	SOX2.p2	NM_001128205|SULF1|23213|sulfatase 1	NM_001128206|SULF1|23213|sulfatase 1
hg18_v1_chr10_-_95452301_95452350	0.0177571	SOX2.p2	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR621041|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1	CR625507|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg18_v1_chr12_+_7348194_7348194	0.0177448	SOX2.p2	NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4
hg18_v1_chr1_-_91259601_91259625	0.0177445	SOX2.p2	BC050656|ZNF644|84146|zinc finger protein 644	AK024026|ZNF644|84146|zinc finger protein 644	NM_016620|ZNF644|84146|zinc finger protein 644
hg18_v1_chr3_-_50311666_50311906	0.0177199	SOX2.p2	AF502909|HYAL3|8372|hyaluronoglucosaminidase 3	AF502910|HYAL3|8372|hyaluronoglucosaminidase 3	AF502911|HYAL3|8372|hyaluronoglucosaminidase 3	AF502912|HYAL3|8372|hyaluronoglucosaminidase 3	BC004483|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	NM_012191|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR594453|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR608020|HYAL3|8372|hyaluronoglucosaminidase 3	BC005896|HYAL3|8372|hyaluronoglucosaminidase 3	BC035689|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313455|HYAL3|8372|hyaluronoglucosaminidase 3	AF040710|HYAL3|8372|hyaluronoglucosaminidase 3	CR614993|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	BC051750|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	CR595994|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AK313803|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	AF036035|HYAL3|8372|hyaluronoglucosaminidase 3	NM_003549|HYAL3|8372|hyaluronoglucosaminidase 3
hg18_v1_chr5_-_149446182_149446259	0.017707	SOX2.p2	EU826593|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr3_+_198961020_198961158	0.0177014	SOX2.p2	BC035006|FYTTD1|84248|forty-two-three domain containing 1	NM_032288|FYTTD1|84248|forty-two-three domain containing 1	BC039734|FYTTD1|84248|forty-two-three domain containing 1	AK027672|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr15_-_58558410_58558722	0.0176971	SOX2.p2	BC020918|NARG2|79664|NMDA receptor regulated 2	CR612429|NARG2|79664|NMDA receptor regulated 2	BC151844|NARG2|79664|NMDA receptor regulated 2	BC140894|NARG2|79664|NMDA receptor regulated 2	AF502591|NARG2|79664|NMDA receptor regulated 2	AK055752|NARG2|79664|NMDA receptor regulated 2	CR749852|NARG2|79664|NMDA receptor regulated 2	AY358546|NARG2|79664|NMDA receptor regulated 2	AL832046|NARG2|79664|NMDA receptor regulated 2	AK095389|NARG2|79664|NMDA receptor regulated 2	BX647873|NARG2|79664|NMDA receptor regulated 2	NM_001018089|NARG2|79664|NMDA receptor regulated 2	NM_024611|NARG2|79664|NMDA receptor regulated 2
hg18_v1_chr10_+_123912930_123913001	0.0176708	SOX2.p2	BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2
hg18_v1_chr4_+_38341982_38342461	0.0176385	SOX2.p2	NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)	AK313459|KLF3|51274|Kruppel-like factor 3 (basic)	BC051687|KLF3|51274|Kruppel-like factor 3 (basic)	BC030662|KLF3|51274|Kruppel-like factor 3 (basic)	AF285837|KLF3|51274|Kruppel-like factor 3 (basic)	AB024523|KLF3|51274|Kruppel-like factor 3 (basic)
hg18_v1_chr9_+_124321239_124321241	0.0176316	SOX2.p2	NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4
hg18_v1_chr3_+_185515543_185515977	0.0176265	SOX2.p2	NM_182917|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AK131407|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF281070|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AY082886|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AF002815|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	AB210013|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1
hg18_v1_chr6_-_26307418_26307499	0.0176255	SOX2.p2	BC031333|HIST1H3D|8351|histone cluster 1, H3d	NM_003530|HIST1H3D|8351|histone cluster 1, H3d	BC128035|HIST1H2AD|3013|histone cluster 1, H2ad	CR541970|HIST1H2AD|3013|histone cluster 1, H2ad	CR541999|HIST1H2AD|3013|histone cluster 1, H2ad	EU446963|HIST1H2AD|3013|histone cluster 1, H2ad	NM_021065|HIST1H2AD|3013|histone cluster 1, H2ad	BC093807|HIST1H2AD|3013|histone cluster 1, H2ad	BC093809|HIST1H2AD|3013|histone cluster 1, H2ad	AK312127|HIST1H2AD|3013|histone cluster 1, H2ad	AK316611|HIST1H3D|8351|histone cluster 1, H3d
hg18_v1_chr17_-_60088637_60088652	0.0176029	SOX2.p2	AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2
hg18_v1_chr1_-_59022275_59022372	0.017585	SOX2.p2	BC002646|JUN|3725|jun proto-oncogene	BC068522|JUN|3725|jun proto-oncogene	NM_002228|JUN|3725|jun proto-oncogene
hg18_v1_chr1_+_157824239_157824335	0.0175817	SOX2.p2	BC007039|APCS|325|amyloid P component, serum	BC007058|APCS|325|amyloid P component, serum	BC070178|APCS|325|amyloid P component, serum	NM_001639|APCS|325|amyloid P component, serum	X04608|APCS|325|amyloid P component, serum	BT006750|APCS|325|amyloid P component, serum	CR450313|APCS|325|amyloid P component, serum	M10944|APCS|325|amyloid P component, serum
hg18_v1_chr9_+_35528890_35528938	0.0175772	SOX2.p2	BC146654|RUSC2|9853|RUN and SH3 domain containing 2	AK299805|RUSC2|9853|RUN and SH3 domain containing 2
hg18_v1_chr11_-_118166797_118166889	0.0175418	SOX2.p2	BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr7_+_149651202_149651473	0.0175234	SOX2.p2	NM_001142928|LRRC61|65999|leucine rich repeat containing 61	NM_023942|LRRC61|65999|leucine rich repeat containing 61	CR608476|LRRC61|65999|leucine rich repeat containing 61	CR625785|LRRC61|65999|leucine rich repeat containing 61	AK055954|LRRC61|65999|leucine rich repeat containing 61	CR596920|LRRC61|65999|leucine rich repeat containing 61	CR604731|LRRC61|65999|leucine rich repeat containing 61	CR619181|LRRC61|65999|leucine rich repeat containing 61	CR604499|LRRC61|65999|leucine rich repeat containing 61	CR606039|LRRC61|65999|leucine rich repeat containing 61	CR624936|LRRC61|65999|leucine rich repeat containing 61	CR608616|LRRC61|65999|leucine rich repeat containing 61	CR613542|LRRC61|65999|leucine rich repeat containing 61	CR622405|LRRC61|65999|leucine rich repeat containing 61
hg18_v1_chr11_+_32994303_32994303	0.0174987	SOX2.p2	AF447588|DEPDC7|91614|DEP domain containing 7	NM_139160|DEPDC7|91614|DEP domain containing 7
hg18_v1_chr14_-_68689574_68689620	0.0174929	SOX2.p2	BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5
hg18_v1_chr12_+_97433462_97433535	0.0174802	SOX2.p2	NM_001032283|TMPO|7112|thymopoietin	NM_001032284|TMPO|7112|thymopoietin	NM_003276|TMPO|7112|thymopoietin	BC050383|TMPO|7112|thymopoietin	BC053675|TMPO|7112|thymopoietin
hg18_v1_chr6_+_170457705_170457761	0.0174634	SOX2.p2	DQ873695|FAM120B|84498|family with sequence similarity 120B	AK056435|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr3_+_113200275_113200591	0.0174582	SOX2.p2	NM_001008272|TAGLN3|29114|transgelin 3	NM_013259|TAGLN3|29114|transgelin 3	AF303058|TAGLN3|29114|transgelin 3	AF087855|TAGLN3|29114|transgelin 3	AK315289|TAGLN3|29114|transgelin 3	BC015329|TAGLN3|29114|transgelin 3	CR600116|TAGLN3|29114|transgelin 3
hg18_v1_chr17_-_53920699_53920797	0.0174574	SOX2.p2	BC115385|HSF5|124535|heat shock transcription factor family member 5	BC115386|HSF5|124535|heat shock transcription factor family member 5	BC033017|HSF5|124535|heat shock transcription factor family member 5	BC033020|HSF5|124535|heat shock transcription factor family member 5	NM_001080439|HSF5|124535|heat shock transcription factor family member 5
hg18_v1_chr8_-_20084892_20084996	0.0174439	SOX2.p2	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR621905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	CR593627|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1	U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1
hg18_v1_chr3_+_129253997_129254027	0.0174307	SOX2.p2	CR623601|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)
hg18_v1_chr2_+_219354692_219354744	0.0174046	SOX2.p2	AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1
hg18_v1_chr17_-_53515563_53515669	0.0173741	SOX2.p2	
hg18_v1_chr20_-_34925483_34925614	0.0173549	SOX2.p2	NM_080627|KIAA0889|140710|KIAA0889
hg18_v1_chr16_+_66484671_66484776	0.0173373	SOX2.p2	AK309272|PSKH1|5681|protein serine kinase H1	NM_006742|PSKH1|5681|protein serine kinase H1	BC062616|PSKH1|5681|protein serine kinase H1	AJ272212|PSKH1|5681|protein serine kinase H1
hg18_v1_chr6_-_53517466_53517487	0.017318	SOX2.p2	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit
hg18_v1_chr17_+_13913566_13913647	0.0172787	SOX2.p2	BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg18_v1_chr5_+_150380325_150380407	0.0172707	SOX2.p2	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)	BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591707|GPX3|2878|glutathione peroxidase 3 (plasma)	D00632|GPX3|2878|glutathione peroxidase 3 (plasma)	BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)	BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)	BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)	CR613980|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615361|GPX3|2878|glutathione peroxidase 3 (plasma)	CR590594|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599318|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601235|GPX3|2878|glutathione peroxidase 3 (plasma)	CR606740|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591081|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591549|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594135|GPX3|2878|glutathione peroxidase 3 (plasma)	CR594536|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597434|GPX3|2878|glutathione peroxidase 3 (plasma)	CR597736|GPX3|2878|glutathione peroxidase 3 (plasma)	CR603874|GPX3|2878|glutathione peroxidase 3 (plasma)	CR605862|GPX3|2878|glutathione peroxidase 3 (plasma)	CR609961|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612224|GPX3|2878|glutathione peroxidase 3 (plasma)	CR614185|GPX3|2878|glutathione peroxidase 3 (plasma)	CR617790|GPX3|2878|glutathione peroxidase 3 (plasma)	CR618599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR619761|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621477|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623599|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623606|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623985|GPX3|2878|glutathione peroxidase 3 (plasma)	CR624695|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598624|GPX3|2878|glutathione peroxidase 3 (plasma)	CR601731|GPX3|2878|glutathione peroxidase 3 (plasma)	CR621207|GPX3|2878|glutathione peroxidase 3 (plasma)	CR615321|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)	BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)	CR591367|GPX3|2878|glutathione peroxidase 3 (plasma)	CR598855|GPX3|2878|glutathione peroxidase 3 (plasma)	CR599527|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623984|GPX3|2878|glutathione peroxidase 3 (plasma)	CR623260|GPX3|2878|glutathione peroxidase 3 (plasma)	CR612204|GPX3|2878|glutathione peroxidase 3 (plasma)	AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)
hg18_v1_chr2_-_47235929_47236020	0.0172568	SOX2.p2	AK097491|C2orf61|285051|chromosome 2 open reading frame 61	NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61	NM_173649|C2orf61|285051|chromosome 2 open reading frame 61
hg18_v1_chr7_-_136678901_136678916	0.0172502	SOX2.p2	CR596476|PTN|5764|pleiotrophin	AK290488|PTN|5764|pleiotrophin
hg18_v1_chr16_-_15095590_15095668	0.0172475	SOX2.p2	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)	AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
hg18_v1_chr1_+_224317056_224317059	0.0172034	SOX2.p2	BC081560|LOC440926|440926|H3 histone, family 3A pseudogene	BC081561|H3F3A|3020|H3 histone, family 3A	CR594691|LOC440926|440926|H3 histone, family 3A pseudogene	CR600004|H3F3A|3020|H3 histone, family 3A	CR625697|LOC440926|440926|H3 histone, family 3A pseudogene
hg18_v1_chrX_+_41078353_41078449	0.0171671	SOX2.p2	AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked
hg18_v1_chr1_+_171950684_171950754	0.0171434	SOX2.p2	NM_014458|KLHL20|27252|kelch-like 20 (Drosophila)	AK308048|KLHL20|27252|kelch-like 20 (Drosophila)	AK300755|KLHL20|27252|kelch-like 20 (Drosophila)	AK001430|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr12_-_56432375_56432375	0.0171128	SOX2.p2	AK297901|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr17_+_56032271_56032381	0.017098	SOX2.p2	BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	CR618625|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg18_v1_chr15_+_38673509_38673525	0.0170938	SOX2.p2	AF173994|CASC5|57082|cancer susceptibility candidate 5	BC043597|CASC5|57082|cancer susceptibility candidate 5
hg18_v1_chr1_-_149955415_149955505	0.0170861	SOX2.p2	AB209264|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3	NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3
hg18_v1_chr11_-_118167036_118167057	0.0170678	SOX2.p2	D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr20_-_42584100_42584143	0.0170229	SOX2.p2	AK295120|SERINC3|10955|serine incorporator 3	AK309993|SERINC3|10955|serine incorporator 3	CR617136|SERINC3|10955|serine incorporator 3	NM_006811|SERINC3|10955|serine incorporator 3	NM_198941|SERINC3|10955|serine incorporator 3
hg18_v1_chr2_-_160277083_160277221	0.0169708	SOX2.p2	BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B
hg18_v1_chr2_+_190723216_190723216	0.0169575	SOX2.p2	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88
hg18_v1_chr1_+_31659246_31659302	0.016952	SOX2.p2	AK093784|SERINC2|347735|serine incorporator 2	AK316357|SERINC2|347735|serine incorporator 2	NM_001199039|SERINC2|347735|serine incorporator 2	NM_018565|SERINC2|347735|serine incorporator 2	AK296118|SERINC2|347735|serine incorporator 2
hg18_v1_chr21_+_39739663_39739667	0.0168974	SOX2.p2	NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein
hg18_v1_chr12_+_12829807_12829881	0.0168754	SOX2.p2	BC126433|APOLD1|81575|apolipoprotein L domain containing 1	BC126435|APOLD1|81575|apolipoprotein L domain containing 1	NM_030817|APOLD1|81575|apolipoprotein L domain containing 1	AK225176|APOLD1|81575|apolipoprotein L domain containing 1	AK314392|APOLD1|81575|apolipoprotein L domain containing 1	AL136783|APOLD1|81575|apolipoprotein L domain containing 1
hg18_v1_chr4_-_44423275_44423368	0.0168732	SOX2.p2	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2
hg18_v1_chr17_+_63462347_63462394	0.0168558	SOX2.p2	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	CR606537|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
hg18_v1_chrX_-_37916138_37916147	0.0168309	SOX2.p2	CR622289|SRPX|8406|sushi-repeat containing protein, X-linked
hg18_v1_chr16_+_14835087_14835201	0.0167973	SOX2.p2	AL832855|NOMO2|283820|NODAL modulator 2	NM_014287|NOMO1|23420|NODAL modulator 1	BC041131|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC028389|NOMO2|283820|NODAL modulator 2	BC065535|NOMO1|23420|NODAL modulator 1
hg18_v1_chr12_-_100748640_100748794	0.0167123	SOX2.p2	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
hg18_v1_chr22_-_43272567_43272997	0.0166714	SOX2.p2	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like
hg18_v1_chr14_-_72994967_72995004	0.0166461	SOX2.p2	BX248775|NUMB|8650|numb homolog (Drosophila)	BX647137|NUMB|8650|numb homolog (Drosophila)	AF171938|NUMB|8650|numb homolog (Drosophila)	AF171939|NUMB|8650|numb homolog (Drosophila)	AF171940|NUMB|8650|numb homolog (Drosophila)	AF171941|NUMB|8650|numb homolog (Drosophila)	BX248073|NUMB|8650|numb homolog (Drosophila)	AF015040|NUMB|8650|numb homolog (Drosophila)	AK315130|NUMB|8650|numb homolog (Drosophila)	BC020788|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr13_-_26232777_26232929	0.0166122	SOX2.p2	AK312602|GPR12|2835|G protein-coupled receptor 12	AK294378|GPR12|2835|G protein-coupled receptor 12	AK311107|GPR12|2835|G protein-coupled receptor 12	AK307756|GPR12|2835|G protein-coupled receptor 12	AK290220|GPR12|2835|G protein-coupled receptor 12	NM_005288|GPR12|2835|G protein-coupled receptor 12
hg18_v1_chr3_+_150065732_150065784	0.016515	SOX2.p2	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)	AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)	BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)	DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)	M27717|CPA3|1359|carboxypeptidase A3 (mast cell)
hg18_v1_chr6_+_127706451_127706483	0.0165066	SOX2.p2	
hg18_v1_chr1_-_151333624_151333624	0.0164936	SOX2.p2	M20030|SPRR2E|6704|small proline-rich protein 2E	NM_001024209|SPRR2E|6704|small proline-rich protein 2E
hg18_v1_chr1_+_202031373_202031421	0.0164767	SOX2.p2	NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A	CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A	AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr1_+_202031445_202031458	0.0164734	SOX2.p2	BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A	BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A
hg18_v1_chr15_+_81907176_81907289	0.0164178	SOX2.p2	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3	AF036269|SH3GL3|6457|SH3-domain GRB2-like 3	AF036270|SH3GL3|6457|SH3-domain GRB2-like 3	AF036271|SH3GL3|6457|SH3-domain GRB2-like 3	AF036272|SH3GL3|6457|SH3-domain GRB2-like 3	X99664|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chrX_+_70420259_70420278	0.0163767	SOX2.p2	U02493|NONO|4841|non-POU domain containing, octamer-binding	U89867|NONO|4841|non-POU domain containing, octamer-binding
hg18_v1_chr2_-_77602843_77603009	0.0163356	SOX2.p2	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4
hg18_v1_chr7_-_122126422_122126445	0.0163206	SOX2.p2	BC022038|RNF133|168433|ring finger protein 133	AF447589|RNF133|168433|ring finger protein 133	NM_139175|RNF133|168433|ring finger protein 133	AK098524|RNF133|168433|ring finger protein 133
hg18_v1_chr3_+_129254032_129254081	0.0162715	SOX2.p2	
hg18_v1_chr8_+_133856793_133856855	0.0162262	SOX2.p2	AK290506|PHF20L1|51105|PHD finger protein 20-like 1	CR623764|PHF20L1|51105|PHD finger protein 20-like 1	BC002822|PHF20L1|51105|PHD finger protein 20-like 1	BC015211|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr7_+_44802798_44802826	0.0162209	SOX2.p2	AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR626590|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR618683|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR603867|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr9_+_4652285_4652337	0.0162206	SOX2.p2	BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2	AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2
hg18_v1_chr20_+_43895802_43895965	0.0161958	SOX2.p2	AK293443|SNX21|90203|sorting nexin family member 21	BC012904|SNX21|90203|sorting nexin family member 21	NM_001042632|SNX21|90203|sorting nexin family member 21	NM_001042633|SNX21|90203|sorting nexin family member 21	NM_033421|SNX21|90203|sorting nexin family member 21	NM_152897|SNX21|90203|sorting nexin family member 21	AF523834|SNX21|90203|sorting nexin family member 21	AL591562|SNX21|90203|sorting nexin family member 21	BC019823|SNX21|90203|sorting nexin family member 21	AF395845|SNX21|90203|sorting nexin family member 21
hg18_v1_chr20_+_31106797_31106890	0.0161938	SOX2.p2	BC113398|C20orf185|359710|chromosome 20 open reading frame 185	BC113400|C20orf185|359710|chromosome 20 open reading frame 185	AF549189|C20orf185|359710|chromosome 20 open reading frame 185	NM_182658|C20orf185|359710|chromosome 20 open reading frame 185
hg18_v1_chr2_-_113310796_113310835	0.0161921	SOX2.p2	X56087|IL1B|3553|interleukin 1, beta	X02532|IL1B|3553|interleukin 1, beta	K02770|IL1B|3553|interleukin 1, beta	M54933|IL1B|3553|interleukin 1, beta	AK313983|IL1B|3553|interleukin 1, beta	BC008678|IL1B|3553|interleukin 1, beta	M15330|IL1B|3553|interleukin 1, beta	NM_000576|IL1B|3553|interleukin 1, beta
hg18_v1_chr5_-_142764295_142764424	0.0161323	SOX2.p2	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr12_+_54498129_54498146	0.0161229	SOX2.p2	AK223180|ORMDL2|29095|ORM1-like 2 (S. cerevisiae)
hg18_v1_chr22_+_37823174_37823258	0.0161217	SOX2.p2	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H	CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H
hg18_v1_chr12_+_70366140_70366153	0.0161102	SOX2.p2	BC008596|TMEM19|55266|transmembrane protein 19	NM_018279|TMEM19|55266|transmembrane protein 19
hg18_v1_chr11_-_121492010_121492132	0.0160672	SOX2.p2	BC130361|BLID|414899|BH3-like motif containing, cell death inducer	BC130363|BLID|414899|BH3-like motif containing, cell death inducer	AF303179|BLID|414899|BH3-like motif containing, cell death inducer	NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer
hg18_v1_chr19_-_2901583_2901642	0.0160389	SOX2.p2	
hg18_v1_chrX_-_130251068_130251119	0.0160009	SOX2.p2	NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1	NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr17_+_27701251_27701288	0.0159755	SOX2.p2	CR617452|ZNF207|7756|zinc finger protein 207	BC002372|ZNF207|7756|zinc finger protein 207	NM_001032293|ZNF207|7756|zinc finger protein 207	NM_001098507|ZNF207|7756|zinc finger protein 207	NM_003457|ZNF207|7756|zinc finger protein 207
hg18_v1_chr12_-_56432292_56432374	0.0159563	SOX2.p2	U79269|CDK4|1019|cyclin-dependent kinase 4	AK313701|CDK4|1019|cyclin-dependent kinase 4	CR591116|CDK4|1019|cyclin-dependent kinase 4	Z48970|CDK4|1019|cyclin-dependent kinase 4	BC003644|CDK4|1019|cyclin-dependent kinase 4	CR598582|CDK4|1019|cyclin-dependent kinase 4	BC010153|CDK4|1019|cyclin-dependent kinase 4	CR590586|CDK4|1019|cyclin-dependent kinase 4	CR616342|CDK4|1019|cyclin-dependent kinase 4	CR608247|CDK4|1019|cyclin-dependent kinase 4	CR594194|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr8_-_11966664_11966664	0.0159438	SOX2.p2	DQ012022|DEFB130|245940|defensin, beta 130	NM_001037804|DEFB130|245940|defensin, beta 130	NM_001195257|LOC100133267|100133267|defensin, beta 130-like
hg18_v1_chr3_-_63824544_63824848	0.0159417	SOX2.p2	AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)	AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)	NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr12_+_48047428_48047895	0.0159201	SOX2.p2	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2	AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2	AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2	BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2	BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2
hg18_v1_chr7_-_72894774_72894822	0.0159177	SOX2.p2	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27	AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27
hg18_v1_chr4_-_89299034_89299089	0.0158982	SOX2.p2	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2	NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2
hg18_v1_chr4_+_41235077_41235091	0.0158642	SOX2.p2	AL831962|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr2_-_27187467_27187473	0.0158599	SOX2.p2	AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1	NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1
hg18_v1_chr11_-_118167073_118167106	0.0158576	SOX2.p2	Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr17_-_35510074_35510423	0.0158507	SOX2.p2	M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1
hg18_v1_chr14_-_59020878_59020883	0.0158406	SOX2.p2	
hg18_v1_chr10_+_93548162_93548177	0.0157785	SOX2.p2	AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr7_+_102502852_102503055	0.0156943	SOX2.p2	CR618507|ARMC10|83787|armadillo repeat containing 10	CR613957|ARMC10|83787|armadillo repeat containing 10	AF275808|ARMC10|83787|armadillo repeat containing 10
hg18_v1_chr3_-_14964403_14964530	0.0156657	SOX2.p2	
hg18_v1_chr12_-_56432377_56432383	0.0156632	SOX2.p2	CR597992|CDK4|1019|cyclin-dependent kinase 4	BC015669|CDK4|1019|cyclin-dependent kinase 4	CR609991|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr8_+_133856738_133856792	0.0156598	SOX2.p2	NM_016018|PHF20L1|51105|PHD finger protein 20-like 1	NM_032205|PHF20L1|51105|PHD finger protein 20-like 1	NM_198513|PHF20L1|51105|PHD finger protein 20-like 1
hg18_v1_chr5_+_65408500_65408622	0.0156593	SOX2.p2	AK074288|ERBB2IP|55914|erbb2 interacting protein
hg18_v1_chr4_-_57217226_57217444	0.0155651	SOX2.p2	BC014225|HOPX|84525|HOP homeobox	AB059410|HOPX|84525|HOP homeobox	AF492680|HOPX|84525|HOP homeobox	AF492681|HOPX|84525|HOP homeobox	NM_001145459|HOPX|84525|HOP homeobox	NM_139211|HOPX|84525|HOP homeobox
hg18_v1_chr5_+_70980724_70980762	0.0155068	SOX2.p2	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)
hg18_v1_chr6_+_125516499_125516778	0.0154467	SOX2.p2	NM_001003396|TPD52L1|7164|tumor protein D52-like 1	NM_001003397|TPD52L1|7164|tumor protein D52-like 1	NM_003287|TPD52L1|7164|tumor protein D52-like 1	AK291866|TPD52L1|7164|tumor protein D52-like 1	U44427|TPD52L1|7164|tumor protein D52-like 1	BC002375|TPD52L1|7164|tumor protein D52-like 1	AK291872|TPD52L1|7164|tumor protein D52-like 1	AF208012|TPD52L1|7164|tumor protein D52-like 1	AK291887|TPD52L1|7164|tumor protein D52-like 1
hg18_v1_chr7_+_116289827_116289828	0.0154201	SOX2.p2	AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr9_+_130684189_130684219	0.0154056	SOX2.p2	NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A	NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr15_+_78775008_78775120	0.0153388	SOX2.p2	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1	AK298606|FAM108C1|58489|family with sequence similarity 108, member C1
hg18_v1_chr2_+_210575600_210575630	0.0153385	SOX2.p2	BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase	CR625804|RPE|6120|ribulose-5-phosphate-3-epimerase	AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase	AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase	AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase	AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase	AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase	AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase	BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase	BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase	CR621657|RPE|6120|ribulose-5-phosphate-3-epimerase	NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase	EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase	EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase
hg18_v1_chr5_-_140680470_140680517	0.015279	SOX2.p2	U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa	AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
hg18_v1_chr11_-_6661093_6661207	0.0152729	SOX2.p2	CR611344|MRPL17|63875|mitochondrial ribosomal protein L17	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17	CR596004|MRPL17|63875|mitochondrial ribosomal protein L17	DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17	DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17	DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17	BC012306|MRPL17|63875|mitochondrial ribosomal protein L17	CR618867|MRPL17|63875|mitochondrial ribosomal protein L17	AK026857|MRPL17|63875|mitochondrial ribosomal protein L17	AF164797|MRPL17|63875|mitochondrial ribosomal protein L17	CR593225|MRPL17|63875|mitochondrial ribosomal protein L17	AF141338|MRPL17|63875|mitochondrial ribosomal protein L17	CR607645|MRPL17|63875|mitochondrial ribosomal protein L17	NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17
hg18_v1_chr8_+_70567634_70567652	0.0152596	SOX2.p2	AY101175|SULF1|23213|sulfatase 1	AK055607|SULF1|23213|sulfatase 1	BX571746|SULF1|23213|sulfatase 1
hg18_v1_chr6_-_33276426_33276428	0.015248	SOX2.p2	AK300402|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr5_-_43349249_43349328	0.0152432	SOX2.p2	BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr5_+_68702287_68702287	0.0152008	SOX2.p2	AF076838|RAD17|5884|RAD17 homolog (S. pombe)	NM_002873|RAD17|5884|RAD17 homolog (S. pombe)
hg18_v1_chr11_+_36572615_36572746	0.015195	SOX2.p2	AK290833|C11orf74|119710|chromosome 11 open reading frame 74	DQ121386|C11orf74|119710|chromosome 11 open reading frame 74	CR618125|C11orf74|119710|chromosome 11 open reading frame 74	AK095997|C11orf74|119710|chromosome 11 open reading frame 74	AK299642|C11orf74|119710|chromosome 11 open reading frame 74	BC009561|C11orf74|119710|chromosome 11 open reading frame 74	CR612900|C11orf74|119710|chromosome 11 open reading frame 74	BC051031|C11orf74|119710|chromosome 11 open reading frame 74	NM_138787|C11orf74|119710|chromosome 11 open reading frame 74	AK302634|C11orf74|119710|chromosome 11 open reading frame 74
hg18_v1_chr13_-_60887210_60887298	0.0151203	SOX2.p2	AK314607|PCDH20|64881|protocadherin 20	BC027907|PCDH20|64881|protocadherin 20	AF169693|PCDH20|64881|protocadherin 20	AK094680|PCDH20|64881|protocadherin 20
hg18_v1_chr5_-_147142249_147142325	0.0150928	SOX2.p2	BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2
hg18_v1_chr15_+_43666708_43666848	0.0150616	SOX2.p2	AF080470|PLDN|26258|pallidin homolog (mouse)	NM_012388|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr10_+_69314347_69314480	0.0150451	SOX2.p2	AF083106|SIRT1|23411|sirtuin 1	NM_012238|SIRT1|23411|sirtuin 1	AF235040|SIRT1|23411|sirtuin 1
hg18_v1_chrX_+_37750778_37750810	0.0150414	SOX2.p2	BX647688|SYTL5|94122|synaptotagmin-like 5	NM_001163335|SYTL5|94122|synaptotagmin-like 5	NM_138780|SYTL5|94122|synaptotagmin-like 5	AK125106|SYTL5|94122|synaptotagmin-like 5
hg18_v1_chr6_-_53321706_53321901	0.0150374	SOX2.p2	AK299674|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK302948|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_021814|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AF338241|ELOVL5|60481|ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr12_-_83954185_83954185	0.0150314	SOX2.p2	AK126325|TSPAN19|144448|tetraspanin 19	NM_001100917|TSPAN19|144448|tetraspanin 19
hg18_v1_chr7_-_23476156_23476253	0.0149872	SOX2.p2	
hg18_v1_chr5_+_109052945_109052982	0.0149817	SOX2.p2	BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr17_-_13913440_13913535	0.0149703	SOX2.p2	
hg18_v1_chr2_+_47021866_47021948	0.0149224	SOX2.p2	BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A
hg18_v1_chr1_-_174442906_174442977	0.0148816	SOX2.p2	BC020845|RFWD2|64326|ring finger and WD repeat domain 2	AK314750|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr6_+_83130220_83130284	0.0148745	SOX2.p2	BC037161|TPBG|7162|trophoblast glycoprotein	AK074786|TPBG|7162|trophoblast glycoprotein
hg18_v1_chr14_+_75141557_75141557	0.0148509	SOX2.p2	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2
hg18_v1_chr5_-_39460687_39460730	0.0147741	SOX2.p2	BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)
hg18_v1_chr12_-_121551424_121551519	0.0147128	SOX2.p2	AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8	AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8	NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8
hg18_v1_chr12_-_45052830_45052911	0.0147037	SOX2.p2	NM_018976|SLC38A2|54407|solute carrier family 38, member 2
hg18_v1_chr14_-_34414277_34414300	0.014649	SOX2.p2	AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr13_+_30672122_30672298	0.0146338	SOX2.p2	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like	BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like	AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like
hg18_v1_chr5_+_178300799_178300843	0.0145933	SOX2.p2	NM_001178089|ZNF454|285676|zinc finger protein 454	NM_001178090|ZNF454|285676|zinc finger protein 454	NM_182594|ZNF454|285676|zinc finger protein 454	AK094763|ZNF454|285676|zinc finger protein 454	AK292317|ZNF454|285676|zinc finger protein 454
hg18_v1_chr9_-_137938778_137939187	0.0145659	SOX2.p2	NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1
hg18_v1_chr16_-_69114931_69114960	0.0145598	SOX2.p2	BC027726|COG4|25839|component of oligomeric golgi complex 4	AB088369|COG4|25839|component of oligomeric golgi complex 4	BC128144|COG4|25839|component of oligomeric golgi complex 4	BC128145|COG4|25839|component of oligomeric golgi complex 4	AK022874|COG4|25839|component of oligomeric golgi complex 4	BC072438|COG4|25839|component of oligomeric golgi complex 4	BX648010|COG4|25839|component of oligomeric golgi complex 4	AK293235|COG4|25839|component of oligomeric golgi complex 4	AK297557|COG4|25839|component of oligomeric golgi complex 4	AK096557|COG4|25839|component of oligomeric golgi complex 4	NM_001195139|COG4|25839|component of oligomeric golgi complex 4	NM_015386|COG4|25839|component of oligomeric golgi complex 4
hg18_v1_chr12_+_67489063_67489073	0.0145211	SOX2.p2	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)	EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)
hg18_v1_chr2_-_119840727_119840889	0.0144992	SOX2.p2	BC126395|C2orf76|130355|chromosome 2 open reading frame 76	BC126397|C2orf76|130355|chromosome 2 open reading frame 76	BC144012|C2orf76|130355|chromosome 2 open reading frame 76	BC144014|C2orf76|130355|chromosome 2 open reading frame 76	BC171737|C2orf76|130355|chromosome 2 open reading frame 76	NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76	BC047365|C2orf76|130355|chromosome 2 open reading frame 76	BC105805|C2orf76|130355|chromosome 2 open reading frame 76
hg18_v1_chr6_-_33276141_33276231	0.0144918	SOX2.p2	BT007280|RXRB|6257|retinoid X receptor, beta
hg18_v1_chr6_-_75972286_75972465	0.0144735	SOX2.p2	BC146868|COL12A1|1303|collagen, type XII, alpha 1	U73778|COL12A1|1303|collagen, type XII, alpha 1	NM_004370|COL12A1|1303|collagen, type XII, alpha 1	NM_080645|COL12A1|1303|collagen, type XII, alpha 1
hg18_v1_chr1_+_224317030_224317035	0.0144694	SOX2.p2	AK311905|H3F3A|3020|H3 histone, family 3A
hg18_v1_chr17_-_20886680_20887049	0.0144633	SOX2.p2	AB028986|USP22|23326|ubiquitin specific peptidase 22	NM_015276|USP22|23326|ubiquitin specific peptidase 22
hg18_v1_chr9_+_95886625_95886645	0.0144269	SOX2.p2	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr20_+_43470330_43470344	0.0143814	SOX2.p2	CR610357|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg18_v1_chr1_-_156816312_156816312	0.0143649	SOX2.p2	NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1
hg18_v1_chr19_+_49180171_49180220	0.014353	SOX2.p2	AK314510|ZNF155|7711|zinc finger protein 155	AK297360|ZNF155|7711|zinc finger protein 155	AK297384|ZNF155|7711|zinc finger protein 155	AK022875|ZNF155|7711|zinc finger protein 155	NM_003445|ZNF155|7711|zinc finger protein 155	NM_198089|ZNF155|7711|zinc finger protein 155	AF187986|ZNF155|7711|zinc finger protein 155
hg18_v1_chr12_-_30740072_30740195	0.0143249	SOX2.p2	NM_006390|IPO8|10526|importin 8
hg18_v1_chr5_+_179854029_179854099	0.0143015	SOX2.p2	AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6
hg18_v1_chr19_-_54958326_54958354	0.0142896	SOX2.p2	NM_021733|TSKS|60385|testis-specific serine kinase substrate	BC058862|TSKS|60385|testis-specific serine kinase substrate
hg18_v1_chr5_-_64813459_64813502	0.0142842	SOX2.p2	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6	AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg18_v1_chr16_+_30326077_30326235	0.0142666	SOX2.p2	AK313930|ZNF771|51333|zinc finger protein 771	NM_001142305|ZNF771|51333|zinc finger protein 771	NM_016643|ZNF771|51333|zinc finger protein 771
hg18_v1_chr14_+_66896795_66896811	0.0142226	SOX2.p2	AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr1_+_112099703_112099781	0.0142056	SOX2.p2	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
hg18_v1_chr16_+_56054075_56054137	0.0141839	SOX2.p2	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR599625|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620330|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600374|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR615542|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR600258|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR606923|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR620622|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr10_+_115501202_115501202	0.0141699	SOX2.p2	AK128811|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81	NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81	NM_024889|C10orf81|79949|chromosome 10 open reading frame 81
hg18_v1_chr14_+_66896813_66896822	0.0141551	SOX2.p2	D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr11_-_73559507_73559926	0.0141381	SOX2.p2	AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3	AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3	NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3
hg18_v1_chr15_+_48434397_48434507	0.0140827	SOX2.p2	BC014238|LOC100129387|100129387|hypothetical LOC100129387	BC004103|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr15_-_48434677_48434692	0.0140815	SOX2.p2	D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr2_-_24160683_24160756	0.014052	SOX2.p2	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3	BT007149|TP53I3|9540|tumor protein p53 inducible protein 3	CR619579|TP53I3|9540|tumor protein p53 inducible protein 3
hg18_v1_chr8_-_102872614_102872614	0.014048	SOX2.p2	NM_032041|NCALD|83988|neurocalcin delta
hg18_v1_chr6_-_127706141_127706196	0.014004	SOX2.p2	AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr11_+_737449_737483	0.013969	SOX2.p2	AK295537|TALDO1|6888|transaldolase 1	AK313427|TALDO1|6888|transaldolase 1	BC018847|TALDO1|6888|transaldolase 1
hg18_v1_chr7_+_137182230_137182315	0.0139546	SOX2.p2	
hg18_v1_chr5_+_76418214_76418347	0.0139419	SOX2.p2	AK311179|LOC728723|728723|hypothetical LOC728723
hg18_v1_chr2_-_152299229_152299246	0.013938	SOX2.p2	AK096903|NEB|4703|nebulin	AK307607|NEB|4703|nebulin	BC029384|NEB|4703|nebulin	BC012533|NEB|4703|nebulin	BC056251|NEB|4703|nebulin	BC105590|NEB|4703|nebulin	NM_001164507|NEB|4703|nebulin	NM_001164508|NEB|4703|nebulin	NM_004543|NEB|4703|nebulin
hg18_v1_chr6_+_43846155_43846296	0.0138597	SOX2.p2	AF022375|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr14_-_34414241_34414276	0.0138355	SOX2.p2	BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A
hg18_v1_chr1_+_199742906_199743063	0.0137653	SOX2.p2	
hg18_v1_chr8_+_92330691_92330722	0.0137554	SOX2.p2	AJ413229|SLC26A7|115111|solute carrier family 26, member 7	NM_052832|SLC26A7|115111|solute carrier family 26, member 7	NM_134266|SLC26A7|115111|solute carrier family 26, member 7	AF331521|SLC26A7|115111|solute carrier family 26, member 7	AJ413228|SLC26A7|115111|solute carrier family 26, member 7	AJ413230|SLC26A7|115111|solute carrier family 26, member 7
hg18_v1_chr18_+_27152049_27152261	0.013752	SOX2.p2	AF097935|DSG1|1828|desmoglein 1	NM_001942|DSG1|1828|desmoglein 1	X56654|DSG1|1828|desmoglein 1
hg18_v1_chr6_-_83832139_83832316	0.0136816	SOX2.p2	CR590287|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR604323|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	CR598717|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein
hg18_v1_chr9_+_39874941_39874982	0.0136782	SOX2.p2	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2	NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1	BC146855|FAM75A2|642265|family with sequence similarity 75, member A2
hg18_v1_chr5_-_134762738_134762758	0.0136779	SOX2.p2	CR599382|H2AFY|9555|H2A histone family, member Y	CR622217|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr12_+_108020305_108020514	0.0136377	SOX2.p2	NM_003362|UNG|7374|uracil-DNA glycosylase	CR749342|UNG|7374|uracil-DNA glycosylase	AK299416|UNG|7374|uracil-DNA glycosylase	CR613619|UNG|7374|uracil-DNA glycosylase	AK291341|UNG|7374|uracil-DNA glycosylase	X15653|UNG|7374|uracil-DNA glycosylase	BC050634|UNG|7374|uracil-DNA glycosylase	BC015205|UNG|7374|uracil-DNA glycosylase	CR541673|UNG|7374|uracil-DNA glycosylase	GQ129388|UNG|7374|uracil-DNA glycosylase	GQ129389|UNG|7374|uracil-DNA glycosylase
hg18_v1_chr19_+_57492236_57492262	0.0136218	SOX2.p2	BC007056|ZNF480|147657|zinc finger protein 480	BC054018|ZNF480|147657|zinc finger protein 480	NM_144684|ZNF480|147657|zinc finger protein 480	AK096559|ZNF480|147657|zinc finger protein 480	AK096442|ZNF480|147657|zinc finger protein 480	AK303271|ZNF480|147657|zinc finger protein 480	AL832560|ZNF480|147657|zinc finger protein 480	BC065503|ZNF480|147657|zinc finger protein 480	AY512662|ZNF480|147657|zinc finger protein 480	BC018783|ZNF480|147657|zinc finger protein 480
hg18_v1_chr12_+_109046522_109046686	0.0135763	SOX2.p2	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	CR608549|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AF250326|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)
hg18_v1_chr4_+_81475897_81475946	0.0135683	SOX2.p2	BC034296|C4orf22|255119|chromosome 4 open reading frame 22	NM_152770|C4orf22|255119|chromosome 4 open reading frame 22	AK128642|C4orf22|255119|chromosome 4 open reading frame 22	AY349359|C4orf22|255119|chromosome 4 open reading frame 22	DQ893197|C4orf22|255119|chromosome 4 open reading frame 22	DQ893198|C4orf22|255119|chromosome 4 open reading frame 22	DQ896152|C4orf22|255119|chromosome 4 open reading frame 22	DQ896153|C4orf22|255119|chromosome 4 open reading frame 22	DQ896154|C4orf22|255119|chromosome 4 open reading frame 22	DQ896534|C4orf22|255119|chromosome 4 open reading frame 22	DQ896535|C4orf22|255119|chromosome 4 open reading frame 22
hg18_v1_chr9_-_36391149_36391201	0.0135625	SOX2.p2	NM_194330|RNF38|152006|ring finger protein 38
hg18_v1_chr10_+_93548048_93548118	0.0135158	SOX2.p2	AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr8_+_61592278_61592331	0.0135073	SOX2.p2	M28213|RAB2A|5862|RAB2A, member RAS oncogene family	CR605346|RAB2A|5862|RAB2A, member RAS oncogene family	AF498930|RAB2A|5862|RAB2A, member RAS oncogene family	BT019695|RAB2A|5862|RAB2A, member RAS oncogene family
hg18_v1_chr21_-_31012965_31012965	0.0135001	SOX2.p2	AB180042|KRTAP21-3|100288323|keratin associated protein 21-3	NM_001164435|KRTAP21-3|100288323|keratin associated protein 21-3
hg18_v1_chr12_-_52407470_52407573	0.013496	SOX2.p2	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1	BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1	AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1	NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1
hg18_v1_chr4_-_24195276_24195298	0.0134832	SOX2.p2	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15
hg18_v1_chrX_-_117134652_117134855	0.0134555	SOX2.p2	AL591986|KLHL13|90293|kelch-like 13 (Drosophila)	AK316509|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)	NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)
hg18_v1_chr12_-_56432385_56432445	0.0134048	SOX2.p2	CR622282|CDK4|1019|cyclin-dependent kinase 4	BC005864|CDK4|1019|cyclin-dependent kinase 4	CR602927|CDK4|1019|cyclin-dependent kinase 4	AK310724|CDK4|1019|cyclin-dependent kinase 4	M14505|CDK4|1019|cyclin-dependent kinase 4	NM_000075|CDK4|1019|cyclin-dependent kinase 4
hg18_v1_chr4_+_48038095_48038242	0.0133687	SOX2.p2	BC040993|SLAIN2|57606|SLAIN motif family, member 2	AK291006|SLAIN2|57606|SLAIN motif family, member 2
hg18_v1_chr16_+_31632065_31632068	0.0133665	SOX2.p2	AL832197|ZNF720|124411|zinc finger protein 720
hg18_v1_chr17_+_27701300_27701417	0.0133653	SOX2.p2	AK291801|ZNF207|7756|zinc finger protein 207	AK309979|ZNF207|7756|zinc finger protein 207	BC008023|ZNF207|7756|zinc finger protein 207	AB209215|ZNF207|7756|zinc finger protein 207	CR616570|ZNF207|7756|zinc finger protein 207	CR617272|ZNF207|7756|zinc finger protein 207	BC000962|ZNF207|7756|zinc finger protein 207	BT007365|ZNF207|7756|zinc finger protein 207
hg18_v1_chr11_-_57927457_57927457	0.0133557	SOX2.p2	NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3
hg18_v1_chr1_+_156716290_156716291	0.0133163	SOX2.p2	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2
hg18_v1_chr7_-_37454933_37455054	0.0132581	SOX2.p2	AL136787|ELMO1|9844|engulfment and cell motility 1	AK001084|ELMO1|9844|engulfment and cell motility 1	NM_014800|ELMO1|9844|engulfment and cell motility 1	AK314349|ELMO1|9844|engulfment and cell motility 1
hg18_v1_chr6_-_52882419_52882454	0.0132545	SOX2.p2	AF020919|GSTA3|2940|glutathione S-transferase alpha 3	CR601508|GSTA3|2940|glutathione S-transferase alpha 3	BC020619|GSTA3|2940|glutathione S-transferase alpha 3	NM_000847|GSTA3|2940|glutathione S-transferase alpha 3
hg18_v1_chr7_+_23252909_23252910	0.0132529	SOX2.p2	AK297051|GPNMB|10457|glycoprotein (transmembrane) nmb	X76534|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr5_+_88221013_88221028	0.0132482	SOX2.p2	AK093634|RPS6|6194|ribosomal protein S6
hg18_v1_chr14_+_72672913_72672914	0.0132164	SOX2.p2	BC011729|PSEN1|5663|presenilin 1
hg18_v1_chr7_-_64088848_64088848	0.0131397	SOX2.p2	M55422|ZNF117|51351|zinc finger protein 117	NM_015852|ZNF117|51351|zinc finger protein 117
hg18_v1_chr5_+_162865128_162865315	0.0131268	SOX2.p2	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta	NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta	AB073390|MAT2B|27430|methionine adenosyltransferase II, beta	AL136664|MAT2B|27430|methionine adenosyltransferase II, beta	BC093030|MAT2B|27430|methionine adenosyltransferase II, beta	AK096178|MAT2B|27430|methionine adenosyltransferase II, beta	BC066645|MAT2B|27430|methionine adenosyltransferase II, beta	AM393097|MAT2B|27430|methionine adenosyltransferase II, beta	AM393737|MAT2B|27430|methionine adenosyltransferase II, beta	AF182814|MAT2B|27430|methionine adenosyltransferase II, beta	AF113225|MAT2B|27430|methionine adenosyltransferase II, beta
hg18_v1_chrX_-_114374860_114374890	0.0131167	SOX2.p2	BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2
hg18_v1_chrX_-_148604506_148604506	0.0130886	SOX2.p2	AK127849|MAGEA11|4110|melanoma antigen family A, 11	NM_001011544|MAGEA11|4110|melanoma antigen family A, 11
hg18_v1_chr9_+_100745531_100746077	0.0130703	SOX2.p2	AK308438|COL15A1|1306|collagen, type XV, alpha 1	CR595376|COL15A1|1306|collagen, type XV, alpha 1	NM_001855|COL15A1|1306|collagen, type XV, alpha 1	AK095885|COL15A1|1306|collagen, type XV, alpha 1	L25286|COL15A1|1306|collagen, type XV, alpha 1	D21230|COL15A1|1306|collagen, type XV, alpha 1
hg18_v1_chr15_-_39623734_39623748	0.0130311	SOX2.p2	AB037824|RPAP1|26015|RNA polymerase II associated protein 1	AK290224|RPAP1|26015|RNA polymerase II associated protein 1	BC000246|RPAP1|26015|RNA polymerase II associated protein 1
hg18_v1_chr12_+_40117751_40117958	0.0130205	SOX2.p2	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4	AK131554|PDZRN4|29951|PDZ domain containing ring finger 4	NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4	AK091096|PDZRN4|29951|PDZ domain containing ring finger 4	BC093744|PDZRN4|29951|PDZ domain containing ring finger 4	BC093746|PDZRN4|29951|PDZ domain containing ring finger 4
hg18_v1_chr6_+_17390273_17390273	0.0130176	SOX2.p2	NM_001143941|RBM24|221662|RNA binding motif protein 24
hg18_v1_chr5_-_111121691_111121813	0.0130078	SOX2.p2	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13	NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13
hg18_v1_chr19_+_50086299_50086349	0.0130078	SOX2.p2	NM_001128916|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_001128917|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	NM_006114|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	BC047528|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	AF043250|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR593671|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR592041|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR599747|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR600311|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)	CR601010|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg18_v1_chr17_+_40141714_40141813	0.0129625	SOX2.p2	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr17_-_26665213_26665218	0.0129597	SOX2.p2	BC005926|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr6_-_79844618_79844656	0.0129361	SOX2.p2	BC021905|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr7_-_136678973_136678989	0.0129073	SOX2.p2	X52946|PTN|5764|pleiotrophin	AK313424|PTN|5764|pleiotrophin
hg18_v1_chr2_-_106177188_106177192	0.0129037	SOX2.p2	AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1	AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1	AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1
hg18_v1_chr6_+_96132064_96132181	0.0128935	SOX2.p2	BX640869|MANEA|79694|mannosidase, endo-alpha	NM_024641|MANEA|79694|mannosidase, endo-alpha	AY048774|MANEA|79694|mannosidase, endo-alpha	AY048775|MANEA|79694|mannosidase, endo-alpha	BC146671|MANEA|79694|mannosidase, endo-alpha	BC150199|MANEA|79694|mannosidase, endo-alpha	CR936827|MANEA|79694|mannosidase, endo-alpha	AK291940|MANEA|79694|mannosidase, endo-alpha	BX537398|MANEA|79694|mannosidase, endo-alpha
hg18_v1_chr4_+_170778303_170778562	0.0128362	SOX2.p2	AK304362|CLCN3|1182|chloride channel 3	BC054877|CLCN3|1182|chloride channel 3	BC026256|CLCN3|1182|chloride channel 3	BC136510|CLCN3|1182|chloride channel 3
hg18_v1_chr7_+_16533029_16533029	0.0127982	SOX2.p2	NM_001195280|LOC100129335|100129335|leucine-rich repeat-containing protein ENSP00000371558
hg18_v1_chr20_-_3097070_3097206	0.0127904	SOX2.p2	AB011124|ProSAPiP1|9762|ProSAPiP1 protein	NM_014731|ProSAPiP1|9762|ProSAPiP1 protein
hg18_v1_chr4_+_185064876_185064934	0.0127664	SOX2.p2	
hg18_v1_chr5_-_149446319_149446359	0.0127628	SOX2.p2	AB208819|CSF1R|1436|colony stimulating factor 1 receptor
hg18_v1_chr3_+_161956689_161956689	0.0127391	SOX2.p2	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg18_v1_chr12_-_107551694_107551713	0.012706	SOX2.p2	AK225644|SELPLG|6404|selectin P ligand	U02297|SELPLG|6404|selectin P ligand	AK295238|SELPLG|6404|selectin P ligand
hg18_v1_chr13_-_98708549_98708682	0.0127056	SOX2.p2	AF261135|GPR18|2841|G protein-coupled receptor 18	BC050646|GPR18|2841|G protein-coupled receptor 18	AF339781|GPR18|2841|G protein-coupled receptor 18	BC008569|GPR18|2841|G protein-coupled receptor 18	NM_001098200|GPR18|2841|G protein-coupled receptor 18	NM_005292|GPR18|2841|G protein-coupled receptor 18
hg18_v1_chr1_-_181826086_181826277	0.0126608	SOX2.p2	BT007439|NCF2|4688|neutrophil cytosolic factor 2	DQ893650|NCF2|4688|neutrophil cytosolic factor 2	DQ895812|NCF2|4688|neutrophil cytosolic factor 2	AF527950|NCF2|4688|neutrophil cytosolic factor 2	CR593013|NCF2|4688|neutrophil cytosolic factor 2	AK296672|NCF2|4688|neutrophil cytosolic factor 2	AK312666|NCF2|4688|neutrophil cytosolic factor 2	AK298713|NCF2|4688|neutrophil cytosolic factor 2
hg18_v1_chr1_+_61697209_61697352	0.0126497	SOX2.p2	AK096483|NFIA|4774|nuclear factor I/A
hg18_v1_chr10_-_5436781_5436796	0.0126214	SOX2.p2	BC098247|TUBAL3|79861|tubulin, alpha-like 3	BC099716|TUBAL3|79861|tubulin, alpha-like 3	BC105634|TUBAL3|79861|tubulin, alpha-like 3	AK296616|TUBAL3|79861|tubulin, alpha-like 3	AK025318|TUBAL3|79861|tubulin, alpha-like 3	NM_001171864|TUBAL3|79861|tubulin, alpha-like 3	NM_024803|TUBAL3|79861|tubulin, alpha-like 3
hg18_v1_chr12_+_108310906_108310906	0.0126187	SOX2.p2	NM_001101421|MYO1H|283446|myosin IH
hg18_v1_chr11_-_103539895_103540113	0.0126059	SOX2.p2	AY359116|PDGFD|80310|platelet derived growth factor D	AY027517|PDGFD|80310|platelet derived growth factor D	AY027518|PDGFD|80310|platelet derived growth factor D	AF113216|PDGFD|80310|platelet derived growth factor D	AB033832|PDGFD|80310|platelet derived growth factor D	AF336376|PDGFD|80310|platelet derived growth factor D	AK292801|PDGFD|80310|platelet derived growth factor D
hg18_v1_chr7_-_149651594_149651690	0.0125998	SOX2.p2	BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)	NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)
hg18_v1_chr20_+_56989690_56989714	0.0125989	SOX2.p2	AK293410|TH1L|51497|TH1-like (Drosophila)	AK304310|TH1L|51497|TH1-like (Drosophila)	CR616677|TH1L|51497|TH1-like (Drosophila)	NM_198976|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr11_-_10671736_10671750	0.0125953	SOX2.p2	AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog	AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog
hg18_v1_chr4_-_84150997_84151040	0.0125952	SOX2.p2	AB111889|LIN54|132660|lin-54 homolog (C. elegans)	BX640657|LIN54|132660|lin-54 homolog (C. elegans)	BX640966|LIN54|132660|lin-54 homolog (C. elegans)	NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)	NM_194282|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr5_+_148941228_148941327	0.0125837	SOX2.p2	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37	NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37
hg18_v1_chr10_-_61336242_61336419	0.0125806	SOX2.p2	BC064391|CCDC6|8030|coiled-coil domain containing 6	BC036757|CCDC6|8030|coiled-coil domain containing 6	BC022284|CCDC6|8030|coiled-coil domain containing 6	AK292593|CCDC6|8030|coiled-coil domain containing 6	NM_005436|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr5_-_24535386_24535386	0.0125276	SOX2.p2	CR615281|CDH10|1008|cadherin 10, type 2 (T2-cadherin)	NM_001190450|CDH10|1008|cadherin 10, type 2 (T2-cadherin)
hg18_v1_chr19_-_2691053_2691081	0.0125147	SOX2.p2	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3	NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3
hg18_v1_chr1_-_166372244_166372247	0.0125102	SOX2.p2	AK056040|GPR161|23432|G protein-coupled receptor 161	BC028163|GPR161|23432|G protein-coupled receptor 161	NM_153832|GPR161|23432|G protein-coupled receptor 161
hg18_v1_chr15_-_84139182_84139216	0.0124497	SOX2.p2	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr14_-_23847000_23847016	0.0124431	SOX2.p2	AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b
hg18_v1_chr4_+_120167770_120167775	0.0124287	SOX2.p2	AJ010482|SYNPO2|171024|synaptopodin 2
hg18_v1_chr10_+_102662675_102662856	0.0124257	SOX2.p2	AK292565|FAM178A|55719|family with sequence similarity 178, member A	AL832343|FAM178A|55719|family with sequence similarity 178, member A	AL833126|FAM178A|55719|family with sequence similarity 178, member A	BC015131|FAM178A|55719|family with sequence similarity 178, member A	BC047715|FAM178A|55719|family with sequence similarity 178, member A	BC030565|FAM178A|55719|family with sequence similarity 178, member A	BC064526|FAM178A|55719|family with sequence similarity 178, member A	BC020915|FAM178A|55719|family with sequence similarity 178, member A	BC073832|FAM178A|55719|family with sequence similarity 178, member A	AL832383|FAM178A|55719|family with sequence similarity 178, member A
hg18_v1_chr1_-_116184846_116184884	0.012424	SOX2.p2	NM_001111061|NHLH2|4808|nescient helix loop helix 2	AK312849|NHLH2|4808|nescient helix loop helix 2
hg18_v1_chr5_+_140481583_140481605	0.0124158	SOX2.p2	AK313640|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr10_-_73784661_73784707	0.0123159	SOX2.p2	BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	CR606618|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12
hg18_v1_chrX_+_108666891_108667130	0.0123015	SOX2.p2	AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2	AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2
hg18_v1_chr1_-_198643885_198643899	0.0123006	SOX2.p2	AK021707|ZNF281|23528|zinc finger protein 281
hg18_v1_chr12_-_21702021_21702034	0.012261	SOX2.p2	BC002362|LDHB|3945|lactate dehydrogenase B	CR591075|LDHB|3945|lactate dehydrogenase B	CR592578|LDHB|3945|lactate dehydrogenase B	CR624424|LDHB|3945|lactate dehydrogenase B	CR603165|LDHB|3945|lactate dehydrogenase B	CR609530|LDHB|3945|lactate dehydrogenase B	CR624226|LDHB|3945|lactate dehydrogenase B	AY189689|LDHB|3945|lactate dehydrogenase B	CR601136|LDHB|3945|lactate dehydrogenase B	CR604960|LDHB|3945|lactate dehydrogenase B	CR596890|LDHB|3945|lactate dehydrogenase B	CR600793|LDHB|3945|lactate dehydrogenase B
hg18_v1_chrX_-_140614227_140614320	0.0122354	SOX2.p2	AY920734|SPANXD|64648|SPANX family, member D	AY920740|SPANXE|171489|SPANX family, member E	EU447010|SPANXA2|728712|SPANX family, member A2	AF312765|SPANXD|64648|SPANX family, member D	BC103961|SPANXD|64648|SPANX family, member D	AJ457795|SPANXE|171489|SPANX family, member E	NM_032417|SPANXD|64648|SPANX family, member D	BC121070|SPANXD|64648|SPANX family, member D	BC134418|SPANXD|64648|SPANX family, member D	BC005382|SPANXE|171489|SPANX family, member E	NM_145665|SPANXE|171489|SPANX family, member E
hg18_v1_chr5_-_43349338_43349369	0.0122347	SOX2.p2	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)	NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg18_v1_chr6_+_111242516_111242536	0.0122246	SOX2.p2	AK304351|AMD1|262|adenosylmethionine decarboxylase 1
hg18_v1_chr4_+_120167721_120167721	0.0121937	SOX2.p2	FN422000|SYNPO2|171024|synaptopodin 2
hg18_v1_chr17_-_33043514_33043613	0.0121882	SOX2.p2	BC117313|SYNRG|11276|synergin, gamma	BC143452|SYNRG|11276|synergin, gamma	BC143476|SYNRG|11276|synergin, gamma	BC143478|SYNRG|11276|synergin, gamma	BC084536|SYNRG|11276|synergin, gamma	BC090930|SYNRG|11276|synergin, gamma	AF169548|SYNRG|11276|synergin, gamma	AK302821|SYNRG|11276|synergin, gamma	NM_001163544|SYNRG|11276|synergin, gamma	NM_001163545|SYNRG|11276|synergin, gamma	NM_001163546|SYNRG|11276|synergin, gamma	NM_001163547|SYNRG|11276|synergin, gamma	NM_007247|SYNRG|11276|synergin, gamma	NM_080550|SYNRG|11276|synergin, gamma	NM_198882|SYNRG|11276|synergin, gamma
hg18_v1_chr3_+_57069508_57069579	0.0121784	SOX2.p2	AY221117|SPATA12|353324|spermatogenesis associated 12	NM_181727|SPATA12|353324|spermatogenesis associated 12	BC126274|SPATA12|353324|spermatogenesis associated 12	BC136498|SPATA12|353324|spermatogenesis associated 12
hg18_v1_chr16_+_31632031_31632064	0.0121737	SOX2.p2	NM_001130913|ZNF720|124411|zinc finger protein 720	BC055408|ZNF720|124411|zinc finger protein 720
hg18_v1_chr4_+_15089931_15089963	0.0121134	SOX2.p2	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A	BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A
hg18_v1_chr14_+_66896824_66896829	0.0120792	SOX2.p2	CR618395|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr3_+_116824840_116825226	0.0120385	SOX2.p2	NM_001130064|GAP43|2596|growth associated protein 43	NM_002045|GAP43|2596|growth associated protein 43	CR607941|GAP43|2596|growth associated protein 43	AK289699|GAP43|2596|growth associated protein 43	M25667|GAP43|2596|growth associated protein 43	AK313658|GAP43|2596|growth associated protein 43	BX648458|GAP43|2596|growth associated protein 43	AK290100|GAP43|2596|growth associated protein 43	CR623492|GAP43|2596|growth associated protein 43	BC007936|GAP43|2596|growth associated protein 43	CR614045|GAP43|2596|growth associated protein 43	CR612258|GAP43|2596|growth associated protein 43	AM392759|GAP43|2596|growth associated protein 43	AM393509|GAP43|2596|growth associated protein 43	DQ893244|GAP43|2596|growth associated protein 43	DQ896574|GAP43|2596|growth associated protein 43	BT019771|GAP43|2596|growth associated protein 43	BT019810|GAP43|2596|growth associated protein 43
hg18_v1_chr4_-_91979113_91979291	0.0120383	SOX2.p2	CR596371|TMSL3|7117|thymosin-like 3	CR605307|TMSL3|7117|thymosin-like 3	CR624038|TMSL3|7117|thymosin-like 3	CR621963|TMSL3|7117|thymosin-like 3	NM_183049|TMSL3|7117|thymosin-like 3
hg18_v1_chr1_+_47572209_47572247	0.0120354	SOX2.p2	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg18_v1_chr3_+_23961739_23961899	0.0120146	SOX2.p2	NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	CR602304|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2	BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2
hg18_v1_chr8_-_67253234_67253399	0.0120074	SOX2.p2	CR619891|CRH|1392|corticotropin releasing hormone	CR626513|CRH|1392|corticotropin releasing hormone	BC002599|CRH|1392|corticotropin releasing hormone	BC011031|CRH|1392|corticotropin releasing hormone	CR603754|CRH|1392|corticotropin releasing hormone	CR592854|CRH|1392|corticotropin releasing hormone	AK075431|CRH|1392|corticotropin releasing hormone	CR625216|CRH|1392|corticotropin releasing hormone	CR617485|CRH|1392|corticotropin releasing hormone	NM_000756|CRH|1392|corticotropin releasing hormone
hg18_v1_chr14_+_72672893_72672912	0.0119727	SOX2.p2	NM_000021|PSEN1|5663|presenilin 1	NM_007318|PSEN1|5663|presenilin 1	CR595392|PSEN1|5663|presenilin 1	AK303876|PSEN1|5663|presenilin 1	AK312531|PSEN1|5663|presenilin 1
hg18_v1_chr17_-_36113502_36113527	0.0118843	SOX2.p2	BC111964|KRT24|192666|keratin 24	BC111968|KRT24|192666|keratin 24	CR607026|KRT24|192666|keratin 24	AK000268|KRT24|192666|keratin 24	NM_019016|KRT24|192666|keratin 24
hg18_v1_chr5_+_140481763_140481764	0.0118424	SOX2.p2	AF152497|PCDHB4|56131|protocadherin beta 4	AF217754|PCDHB4|56131|protocadherin beta 4	BC098139|PCDHB4|56131|protocadherin beta 4	BC098346|PCDHB4|56131|protocadherin beta 4	NM_018938|PCDHB4|56131|protocadherin beta 4
hg18_v1_chr6_-_52549673_52549761	0.011838	SOX2.p2	DQ891068|TRAM2|9697|translocation associated membrane protein 2	DQ894250|TRAM2|9697|translocation associated membrane protein 2	D31762|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr17_+_27701291_27701298	0.0118287	SOX2.p2	AK298950|ZNF207|7756|zinc finger protein 207	AK226172|ZNF207|7756|zinc finger protein 207
hg18_v1_chr10_-_44775142_44775164	0.0117875	SOX2.p2	AK056518|LOC220980|220980|hypothetical LOC220980
hg18_v1_chr8_-_101227203_101227274	0.011705	SOX2.p2	BC090892|FBXO43|286151|F-box protein 43	NM_001029860|FBXO43|286151|F-box protein 43
hg18_v1_chr6_-_47385205_47385242	0.0116943	SOX2.p2	AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr17_+_23670247_23670394	0.0116885	SOX2.p2	NM_014573|TMEM97|27346|transmembrane protein 97	L19183|TMEM97|27346|transmembrane protein 97	AK299511|TMEM97|27346|transmembrane protein 97	AK307678|TMEM97|27346|transmembrane protein 97	CR612870|TMEM97|27346|transmembrane protein 97	CR613993|TMEM97|27346|transmembrane protein 97	BC017362|TMEM97|27346|transmembrane protein 97	BC091504|TMEM97|27346|transmembrane protein 97	CR590967|TMEM97|27346|transmembrane protein 97	AK293331|TMEM97|27346|transmembrane protein 97
hg18_v1_chr5_-_111782637_111782908	0.0116338	SOX2.p2	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A
hg18_v1_chr1_+_63605912_63605925	0.0116261	SOX2.p2	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)
hg18_v1_chr2_+_1397186_1397187	0.011589	SOX2.p2	NM_175721|TPO|7173|thyroid peroxidase	NM_175722|TPO|7173|thyroid peroxidase	AF439430|TPO|7173|thyroid peroxidase
hg18_v1_chr11_+_5466490_5466490	0.0115719	SOX2.p2	BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1	NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1
hg18_v1_chr17_-_5312904_5312930	0.0115509	SOX2.p2	AK025625|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr2_+_189547358_189547368	0.011484	SOX2.p2	X14420|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr15_+_81906983_81907145	0.0114717	SOX2.p2	AK309086|SH3GL3|6457|SH3-domain GRB2-like 3	NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3	AK307442|SH3GL3|6457|SH3-domain GRB2-like 3	BC042864|SH3GL3|6457|SH3-domain GRB2-like 3
hg18_v1_chr18_+_19848749_19848760	0.0114661	SOX2.p2	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C
hg18_v1_chr7_+_44802834_44802848	0.0114302	SOX2.p2	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR609623|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR613992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr12_+_97433545_97433601	0.0114286	SOX2.p2	AK315221|TMPO|7112|thymopoietin	U09086|TMPO|7112|thymopoietin	S76736|TMPO|7112|thymopoietin
hg18_v1_chr7_+_18515488_18515500	0.0114185	SOX2.p2	AK304343|HDAC9|9734|histone deacetylase 9
hg18_v1_chrX_-_101284026_101284100	0.0114121	SOX2.p2	BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6	NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6
hg18_v1_chr3_+_20056527_20056527	0.0113726	SOX2.p2	NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B	U57317|KAT2B|8850|K(lysine) acetyltransferase 2B
hg18_v1_chr1_+_42920946_42921397	0.0113429	SOX2.p2	BC013838|YBX1|4904|Y box binding protein 1
hg18_v1_chr12_+_43896099_43896133	0.0113273	SOX2.p2	AK303996|ANO6|196527|anoctamin 6
hg18_v1_chr11_-_62230078_62230466	0.0112927	SOX2.p2	CR621335|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR617488|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR602177|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	CR609599|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg18_v1_chr6_+_88021644_88021755	0.0112422	SOX2.p2	AL832366|ZNF292|23036|zinc finger protein 292
hg18_v1_chr10_+_35524060_35524123	0.01124	SOX2.p2	D14826|CREM|1390|cAMP responsive element modulator	NM_182717|CREM|1390|cAMP responsive element modulator	NM_182718|CREM|1390|cAMP responsive element modulator	NM_182719|CREM|1390|cAMP responsive element modulator	NM_182720|CREM|1390|cAMP responsive element modulator	AK290612|CREM|1390|cAMP responsive element modulator	CR601807|CREM|1390|cAMP responsive element modulator	AF069065|CREM|1390|cAMP responsive element modulator	U44836|CREM|1390|cAMP responsive element modulator
hg18_v1_chr18_-_27518392_27518683	0.011233	SOX2.p2	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6	NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg18_v1_chr7_-_20793028_20793090	0.0112184	SOX2.p2	AK056857|SP8|221833|Sp8 transcription factor	AK307969|SP8|221833|Sp8 transcription factor	AY167047|SP8|221833|Sp8 transcription factor	BC038669|SP8|221833|Sp8 transcription factor	AK290465|SP8|221833|Sp8 transcription factor	NM_182700|SP8|221833|Sp8 transcription factor	NM_198956|SP8|221833|Sp8 transcription factor
hg18_v1_chr2_+_113015962_113016083	0.0112174	SOX2.p2	AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa
hg18_v1_chr1_-_149586298_149586326	0.0112046	SOX2.p2	X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)	BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)
hg18_v1_chr3_-_47798337_47798339	0.0111905	SOX2.p2	BC050564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr2_+_203901160_203901600	0.0111655	SOX2.p2	NM_005759|ABI2|10152|abl-interactor 2	AK302853|ABI2|10152|abl-interactor 2	AK294429|ABI2|10152|abl-interactor 2	AK299824|ABI2|10152|abl-interactor 2	AK316000|ABI2|10152|abl-interactor 2	BC001439|ABI2|10152|abl-interactor 2	AF260261|ABI2|10152|abl-interactor 2	BT009920|ABI2|10152|abl-interactor 2	DQ890735|ABI2|10152|abl-interactor 2	DQ893907|ABI2|10152|abl-interactor 2
hg18_v1_chr7_-_33068699_33068996	0.0111623	SOX2.p2	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III	BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III	CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III	AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III	BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III	AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III	AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III	AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III	BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III	AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III	NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III
hg18_v1_chr6_+_25387630_25387645	0.0111614	SOX2.p2	AK125696|LRRC16A|55604|leucine rich repeat containing 16A	NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A	NM_017640|LRRC16A|55604|leucine rich repeat containing 16A
hg18_v1_chr12_-_21701985_21701999	0.0111347	SOX2.p2	CR617803|LDHB|3945|lactate dehydrogenase B	CR625734|LDHB|3945|lactate dehydrogenase B	BC071860|LDHB|3945|lactate dehydrogenase B	CR625893|LDHB|3945|lactate dehydrogenase B	NM_001174097|LDHB|3945|lactate dehydrogenase B	Y00711|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr11_-_60885928_60885960	0.0110933	SOX2.p2	AK075559|CYBASC3|220002|cytochrome b, ascorbate dependent 3	CR600742|CYBASC3|220002|cytochrome b, ascorbate dependent 3	CR607104|CYBASC3|220002|cytochrome b, ascorbate dependent 3
hg18_v1_chr6_-_42822525_42822535	0.0110904	SOX2.p2	BC017479|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr7_+_116289765_116289821	0.0110503	SOX2.p2	NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	CR615735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2
hg18_v1_chr3_-_25680723_25681235	0.0110282	SOX2.p2	NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr3_+_23822481_23822531	0.0109813	SOX2.p2	CR622042|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast)
hg18_v1_chr4_-_54152480_54152522	0.0109682	SOX2.p2	AK056823|LNX1|84708|ligand of numb-protein X 1	NM_001126328|LNX1|84708|ligand of numb-protein X 1
hg18_v1_chr5_+_1854493_1854531	0.0109541	SOX2.p2	NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)
hg18_v1_chr20_+_33667160_33667339	0.0109459	SOX2.p2	AF262992|SPAG4|6676|sperm associated antigen 4	NM_003116|SPAG4|6676|sperm associated antigen 4	BC143783|SPAG4|6676|sperm associated antigen 4
hg18_v1_chr16_+_56054049_56054069	0.0109277	SOX2.p2	NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg18_v1_chr7_-_44854222_44854281	0.0109268	SOX2.p2	NM_012412|H2AFV|94239|H2A histone family, member V	NM_138635|H2AFV|94239|H2A histone family, member V	NM_201436|H2AFV|94239|H2A histone family, member V	NM_201516|H2AFV|94239|H2A histone family, member V	NM_201517|H2AFV|94239|H2A histone family, member V
hg18_v1_chr5_+_140568451_140568475	0.0109073	SOX2.p2	AK316160|PCDHB12|56124|protocadherin beta 12	BC045637|PCDHB12|56124|protocadherin beta 12	NM_018932|PCDHB12|56124|protocadherin beta 12
hg18_v1_chr14_-_87862676_87862837	0.0108753	SOX2.p2	AK315263|KCNK10|54207|potassium channel, subfamily K, member 10	EU978938|KCNK10|54207|potassium channel, subfamily K, member 10
hg18_v1_chr12_+_6768866_6768903	0.0108505	SOX2.p2	NM_000616|CD4|920|CD4 molecule
hg18_v1_chr5_-_157011949_157012005	0.0108252	SOX2.p2	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30	AB022441|SOX30|11063|SRY (sex determining region Y)-box 30	AK308329|SOX30|11063|SRY (sex determining region Y)-box 30	BC033492|SOX30|11063|SRY (sex determining region Y)-box 30	NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30	NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30
hg18_v1_chr14_-_30746431_30746441	0.010823	SOX2.p2	NM_015382|HECTD1|25831|HECT domain containing 1
hg18_v1_chr13_-_27092538_27092670	0.0108185	SOX2.p2	BC036755|LNX2|222484|ligand of numb-protein X 2
hg18_v1_chr12_+_54721952_54721988	0.0107962	SOX2.p2	NM_001029|RPS26|6231|ribosomal protein S26	CR611958|RPS26|6231|ribosomal protein S26	BC002604|RPS26|6231|ribosomal protein S26
hg18_v1_chr6_-_87861492_87861568	0.0107931	SOX2.p2	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide	CR615870|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591147|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611908|CGA|1081|glycoprotein hormones, alpha polypeptide	CR591068|CGA|1081|glycoprotein hormones, alpha polypeptide	CR596397|CGA|1081|glycoprotein hormones, alpha polypeptide	CR598298|CGA|1081|glycoprotein hormones, alpha polypeptide	CR616045|CGA|1081|glycoprotein hormones, alpha polypeptide	CR626155|CGA|1081|glycoprotein hormones, alpha polypeptide	CR607107|CGA|1081|glycoprotein hormones, alpha polypeptide	CR595519|CGA|1081|glycoprotein hormones, alpha polypeptide	CR599056|CGA|1081|glycoprotein hormones, alpha polypeptide	CR611195|CGA|1081|glycoprotein hormones, alpha polypeptide	CR602651|CGA|1081|glycoprotein hormones, alpha polypeptide	AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide	BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide	BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide	BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide	NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide	CR610488|CGA|1081|glycoprotein hormones, alpha polypeptide	CR622170|CGA|1081|glycoprotein hormones, alpha polypeptide
hg18_v1_chr13_+_110565587_110565874	0.0107869	SOX2.p2	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7
hg18_v1_chr8_-_144313100_144313129	0.0107572	SOX2.p2	BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H	BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr19_-_41711009_41711087	0.0107556	SOX2.p2	BC042676|ZNF260|339324|zinc finger protein 260	CR609031|ZNF260|339324|zinc finger protein 260	AK291442|ZNF260|339324|zinc finger protein 260	NM_001012756|ZNF260|339324|zinc finger protein 260	NM_001166036|ZNF260|339324|zinc finger protein 260	NM_001166037|ZNF260|339324|zinc finger protein 260	NM_001166038|ZNF260|339324|zinc finger protein 260
hg18_v1_chr8_+_118032370_118032398	0.0107492	SOX2.p2	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8
hg18_v1_chr19_+_7608020_7608035	0.010681	SOX2.p2	AB002559|STXBP2|6813|syntaxin binding protein 2	U63533|STXBP2|6813|syntaxin binding protein 2	CR611383|STXBP2|6813|syntaxin binding protein 2	AK302257|STXBP2|6813|syntaxin binding protein 2	CR620863|STXBP2|6813|syntaxin binding protein 2	BT006915|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr3_+_10832867_10832947	0.0106242	SOX2.p2	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11	S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11
hg18_v1_chr2_-_110230822_110230887	0.0106163	SOX2.p2	AK311353|MALL|7851|mal, T-cell differentiation protein-like
hg18_v1_chr5_-_149772528_149772551	0.0105985	SOX2.p2	
hg18_v1_chr2_-_25245062_25245062	0.0105179	SOX2.p2	NM_000939|POMC|5443|proopiomelanocortin	NM_001035256|POMC|5443|proopiomelanocortin
hg18_v1_chr14_-_20340830_20340875	0.0104862	SOX2.p2	CR600644|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	CR593433|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)
hg18_v1_chr16_+_56054070_56054074	0.0104708	SOX2.p2	
hg18_v1_chr6_+_15357013_15357171	0.0104201	SOX2.p2	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2
hg18_v1_chr14_+_23710924_23710941	0.010365	SOX2.p2	AK291191|REC8|9985|REC8 homolog (yeast)
hg18_v1_chr12_-_57600564_57600574	0.0103578	SOX2.p2	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3
hg18_v1_chr20_-_33793593_33793675	0.010339	SOX2.p2	NM_004902|RBM39|9584|RNA binding motif protein 39	NM_184234|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr13_+_33290205_33290250	0.010332	SOX2.p2	NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa	NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	CR598980|RFC3|5983|replication factor C (activator 1) 3, 38kDa
hg18_v1_chr20_+_17628592_17628604	0.0103254	SOX2.p2	BC054871|BANF2|140836|barrier to autointegration factor 2	NM_001014977|BANF2|140836|barrier to autointegration factor 2	NM_178477|BANF2|140836|barrier to autointegration factor 2	BC062735|BANF2|140836|barrier to autointegration factor 2
hg18_v1_chr7_-_44854183_44854186	0.0103153	SOX2.p2	CR602318|H2AFV|94239|H2A histone family, member V
hg18_v1_chr13_-_29067584_29067658	0.0103142	SOX2.p2	X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr14_+_59020894_59021067	0.0102851	SOX2.p2	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein	NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR605227|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR615396|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR596184|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein	BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR594163|JKAMP|51528|JNK1/MAPK8-associated membrane protein	CR612457|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein	AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein
hg18_v1_chr12_-_106679054_106679209	0.0102673	SOX2.p2	BC068562|PRDM4|11108|PR domain containing 4
hg18_v1_chr7_+_23252911_23252912	0.0101943	SOX2.p2	AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb	AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb	AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb
hg18_v1_chr2_+_236067424_236067661	0.0101816	SOX2.p2	BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
hg18_v1_chr11_-_118167108_118167181	0.0101529	SOX2.p2	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chrX_+_87888881_87888911	0.0101486	SOX2.p2	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1	NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1	AK098646|CPXCR1|53336|CPX chromosome region, candidate 1	AK313768|CPXCR1|53336|CPX chromosome region, candidate 1	BC027614|CPXCR1|53336|CPX chromosome region, candidate 1
hg18_v1_chr7_-_122313646_122313822	0.0101221	SOX2.p2	AY264289|CADPS2|93664|Ca++-dependent secretion activator 2	AF401638|CADPS2|93664|Ca++-dependent secretion activator 2	BC054339|CADPS2|93664|Ca++-dependent secretion activator 2	BC136601|CADPS2|93664|Ca++-dependent secretion activator 2	BC144278|CADPS2|93664|Ca++-dependent secretion activator 2	BC144279|CADPS2|93664|Ca++-dependent secretion activator 2	AK126518|CADPS2|93664|Ca++-dependent secretion activator 2
hg18_v1_chr18_+_75895333_75895576	0.0101126	SOX2.p2	AK307212|RBFA|79863|ribosome binding factor A (putative)	NM_001171967|RBFA|79863|ribosome binding factor A (putative)	NM_024805|RBFA|79863|ribosome binding factor A (putative)	AK024825|RBFA|79863|ribosome binding factor A (putative)	AK311463|RBFA|79863|ribosome binding factor A (putative)	AK311239|RBFA|79863|ribosome binding factor A (putative)	AF261073|RBFA|79863|ribosome binding factor A (putative)	AF439745|RBFA|79863|ribosome binding factor A (putative)	CR602922|RBFA|79863|ribosome binding factor A (putative)	BC057772|RBFA|79863|ribosome binding factor A (putative)	BC014195|RBFA|79863|ribosome binding factor A (putative)
hg18_v1_chr12_-_46439127_46439155	0.0100893	SOX2.p2	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3
hg18_v1_chr1_+_117404432_117404462	0.0100754	SOX2.p2	AK291017|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr9_-_21067804_21067961	0.0100447	SOX2.p2	AB451323|IFNB1|3456|interferon, beta 1, fibroblast	AB451452|IFNB1|3456|interferon, beta 1, fibroblast	BC069314|IFNB1|3456|interferon, beta 1, fibroblast	BC096150|IFNB1|3456|interferon, beta 1, fibroblast	BC096151|IFNB1|3456|interferon, beta 1, fibroblast	BC096152|IFNB1|3456|interferon, beta 1, fibroblast	BC096153|IFNB1|3456|interferon, beta 1, fibroblast	V00547|IFNB1|3456|interferon, beta 1, fibroblast	V00546|IFNB1|3456|interferon, beta 1, fibroblast	M25460|IFNB1|3456|interferon, beta 1, fibroblast	M28622|IFNB1|3456|interferon, beta 1, fibroblast	NM_002176|IFNB1|3456|interferon, beta 1, fibroblast
hg18_v1_chr6_-_127706384_127706446	0.0100439	SOX2.p2	AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1	BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1	AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1	NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1
hg18_v1_chr18_-_75812640_75812641	0.00995553	SOX2.p2	AK301881|PQLC1|80148|PQ loop repeat containing 1	NM_001146343|PQLC1|80148|PQ loop repeat containing 1	NM_001146345|PQLC1|80148|PQ loop repeat containing 1	NM_025078|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr11_-_10835941_10836248	0.00995208	SOX2.p2	AK123233|ZBED5|58486|zinc finger, BED-type containing 5	AK315033|ZBED5|58486|zinc finger, BED-type containing 5	BC047754|ZBED5|58486|zinc finger, BED-type containing 5	AF205600|ZBED5|58486|zinc finger, BED-type containing 5	BC017803|ZBED5|58486|zinc finger, BED-type containing 5	BC038508|ZBED5|58486|zinc finger, BED-type containing 5	NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5	NM_021211|ZBED5|58486|zinc finger, BED-type containing 5
hg18_v1_chr12_-_21702036_21702045	0.00995055	SOX2.p2	AK312328|LDHB|3945|lactate dehydrogenase B	CR606657|LDHB|3945|lactate dehydrogenase B	BC015122|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr3_-_18441763_18441840	0.00994513	SOX2.p2	AK127242|SATB1|6304|SATB homeobox 1	NM_001195470|SATB1|6304|SATB homeobox 1	NM_002971|SATB1|6304|SATB homeobox 1
hg18_v1_chr1_-_27099515_27099522	0.00991627	SOX2.p2	EU832444|GPATCH3|63906|G patch domain containing 3	EU832527|GPATCH3|63906|G patch domain containing 3
hg18_v1_chrX_-_131401319_131401398	0.00990758	SOX2.p2	AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)	EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)	BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)	AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)	AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)	AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)	AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)	NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)
hg18_v1_chr2_-_210743622_210743708	0.00989346	SOX2.p2	AK124963|C2orf67|151050|chromosome 2 open reading frame 67
hg18_v1_chr11_-_16454493_16454510	0.00986037	SOX2.p2	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6	NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6
hg18_v1_chr1_+_33494745_33494760	0.00978585	SOX2.p2	NM_152493|ZNF362|149076|zinc finger protein 362
hg18_v1_chr11_+_57121602_57121785	0.0097854	SOX2.p2	NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR614379|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR619147|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR607756|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR608695|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR594035|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR603289|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	CR612737|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1	M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
hg18_v1_chr18_+_70134089_70134089	0.00978166	SOX2.p2	CR749350|DKFZP781G0119|644041|hypothetical protein LOC644041	NM_001174123|DKFZP781G0119|644041|hypothetical protein LOC644041
hg18_v1_chr1_+_40612891_40612935	0.0097412	SOX2.p2	NM_001198978|SMAP2|64744|small ArfGAP2	AK303975|SMAP2|64744|small ArfGAP2	AL133206|SMAP2|64744|small ArfGAP2
hg18_v1_chr3_-_187744808_187744860	0.00973622	SOX2.p2	AF161703|CRYGS|1427|crystallin, gamma S	BC069478|CRYGS|1427|crystallin, gamma S	AK314172|CRYGS|1427|crystallin, gamma S	NM_017541|CRYGS|1427|crystallin, gamma S
hg18_v1_chr7_+_27746268_27746332	0.0097128	SOX2.p2	AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr2_-_64224948_64225108	0.00969468	SOX2.p2	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)	BC050533|PELI1|57162|pellino homolog 1 (Drosophila)	AK312441|PELI1|57162|pellino homolog 1 (Drosophila)	BC050019|PELI1|57162|pellino homolog 1 (Drosophila)	NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)
hg18_v1_chr1_+_43410587_43410679	0.00968949	SOX2.p2	NM_001167965|WDR65|149465|WD repeat domain 65	NM_152498|WDR65|149465|WD repeat domain 65	NM_001167966|WDR65|149465|WD repeat domain 65	AK056562|WDR65|149465|WD repeat domain 65	BC117280|WDR65|149465|WD repeat domain 65	BC117306|WDR65|149465|WD repeat domain 65	BC143804|WDR65|149465|WD repeat domain 65
hg18_v1_chr12_-_47868563_47868740	0.00966878	SOX2.p2	AK289483|TUBA1A|7846|tubulin, alpha 1a
hg18_v1_chr8_-_144313053_144313076	0.00965731	SOX2.p2	BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H	AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr14_+_66896783_66896789	0.0096353	SOX2.p2	NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR598254|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR601355|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr3_+_184836049_184836139	0.00963509	SOX2.p2	BC142993|KLHL24|54800|kelch-like 24 (Drosophila)	AK026326|KLHL24|54800|kelch-like 24 (Drosophila)	AY422472|KLHL24|54800|kelch-like 24 (Drosophila)	BX648466|KLHL24|54800|kelch-like 24 (Drosophila)	BX648812|KLHL24|54800|kelch-like 24 (Drosophila)	NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)
hg18_v1_chr11_+_13646806_13646820	0.00962449	SOX2.p2	CR936619|FAR1|84188|fatty acyl CoA reductase 1	CR611981|FAR1|84188|fatty acyl CoA reductase 1
hg18_v1_chr14_-_57030227_57030328	0.00961602	SOX2.p2	BC117405|C14orf105|55195|chromosome 14 open reading frame 105	BC143565|C14orf105|55195|chromosome 14 open reading frame 105	BC143566|C14orf105|55195|chromosome 14 open reading frame 105	BC143567|C14orf105|55195|chromosome 14 open reading frame 105	BC143568|C14orf105|55195|chromosome 14 open reading frame 105	AK307238|C14orf105|55195|chromosome 14 open reading frame 105	AK223127|C14orf105|55195|chromosome 14 open reading frame 105	AK001512|C14orf105|55195|chromosome 14 open reading frame 105	BC028060|C14orf105|55195|chromosome 14 open reading frame 105	NM_018168|C14orf105|55195|chromosome 14 open reading frame 105
hg18_v1_chr3_-_195835593_195835712	0.00959786	SOX2.p2	AK126914|TMEM44|93109|transmembrane protein 44	BC039506|TMEM44|93109|transmembrane protein 44
hg18_v1_chr15_+_48434941_48435041	0.00955023	SOX2.p2	BX537481|LOC100129387|100129387|hypothetical LOC100129387	CR596421|LOC100129387|100129387|hypothetical LOC100129387
hg18_v1_chr10_+_93548119_93548145	0.00951128	SOX2.p2	AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg18_v1_chr16_+_65196133_65196152	0.00948835	SOX2.p2	CR598427|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR615620|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR619122|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR618108|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr11_+_17289030_17289089	0.00948752	SOX2.p2	
hg18_v1_chr11_-_55460451_55460451	0.00946849	SOX2.p2	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1	NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1
hg18_v1_chr8_-_38577891_38577956	0.00941751	SOX2.p2	
hg18_v1_chr22_+_38627129_38627258	0.00941509	SOX2.p2	AF129476|GRAP2|9402|GRB2-related adaptor protein 2	AF090456|GRAP2|9402|GRB2-related adaptor protein 2	CR456498|GRAP2|9402|GRB2-related adaptor protein 2	Y18051|GRAP2|9402|GRB2-related adaptor protein 2
hg18_v1_chr17_-_26665144_26665164	0.0093933	SOX2.p2	CR621796|EVI2B|2124|ecotropic viral integration site 2B
hg18_v1_chr3_-_52248182_52248222	0.00931313	SOX2.p2	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR611569|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR593060|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR613911|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR602270|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR600187|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR607625|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR626408|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR596947|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	CR614000|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)
hg18_v1_chr1_+_24944554_24944631	0.00930708	SOX2.p2	AF109196|CLIC4|25932|chloride intracellular channel 4	AM393644|CLIC4|25932|chloride intracellular channel 4	CR533501|CLIC4|25932|chloride intracellular channel 4
hg18_v1_chrX_-_153952447_153952836	0.00927835	SOX2.p2	CR613140|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor	NM_001018025|MTCP1|4515|mature T-cell proliferation 1	CR604905|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor
hg18_v1_chr1_+_148306439_148306537	0.00927662	SOX2.p2	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg18_v1_chr7_-_148356664_148356688	0.00924178	SOX2.p2	BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4	BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4	AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4
hg18_v1_chr2_-_190357320_190357367	0.00923045	SOX2.p2	AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)
hg18_v1_chr12_+_99712504_99712866	0.00918699	SOX2.p2	NM_178826|ANO4|121601|anoctamin 4	AK091591|ANO4|121601|anoctamin 4	AK316105|ANO4|121601|anoctamin 4	AK293810|ANO4|121601|anoctamin 4
hg18_v1_chr4_+_35962038_35962038	0.00918519	SOX2.p2	BC157885|DTHD1|401124|death domain containing 1	NM_001170700|DTHD1|401124|death domain containing 1
hg18_v1_chr9_-_97309507_97309535	0.00916435	SOX2.p2	NM_001083606|PTCH1|5727|patched 1	U43148|PTCH1|5727|patched 1
hg18_v1_chr5_-_127901376_127901456	0.00916378	SOX2.p2	AK300440|FBN2|2201|fibrillin 2
hg18_v1_chr19_+_9799561_9799580	0.00914411	SOX2.p2	AK128885|UBL5|59286|ubiquitin-like 5	AK311889|UBL5|59286|ubiquitin-like 5	NM_001048241|UBL5|59286|ubiquitin-like 5	NM_024292|UBL5|59286|ubiquitin-like 5
hg18_v1_chr10_+_26545599_26545744	0.00913005	SOX2.p2	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg18_v1_chr21_+_30895276_30895310	0.00911885	SOX2.p2	AB096953|KRTAP22-1|337979|keratin associated protein 22-1	BC101682|KRTAP22-1|337979|keratin associated protein 22-1	BC101686|KRTAP22-1|337979|keratin associated protein 22-1	NM_181620|KRTAP22-1|337979|keratin associated protein 22-1
hg18_v1_chr12_+_103904243_103904259	0.00908589	SOX2.p2	BC032326|C12orf45|121053|chromosome 12 open reading frame 45	DQ891649|C12orf45|121053|chromosome 12 open reading frame 45	DQ894838|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr6_-_52549774_52549847	0.00906993	SOX2.p2	AK291751|TRAM2|9697|translocation associated membrane protein 2	BC028121|TRAM2|9697|translocation associated membrane protein 2	NM_012288|TRAM2|9697|translocation associated membrane protein 2
hg18_v1_chr19_-_40939756_40939798	0.0090149	SOX2.p2	CR603021|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR607202|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6	CR618274|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6
hg18_v1_chr7_-_95063738_95063860	0.0089926	SOX2.p2	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4	NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4
hg18_v1_chr2_-_3583724_3583784	0.00898796	SOX2.p2	AJ224117|RNASEH1|246243|ribonuclease H1	BT019670|RNASEH1|246243|ribonuclease H1	CR541820|RNASEH1|246243|ribonuclease H1	DQ892597|RNASEH1|246243|ribonuclease H1	DQ895824|RNASEH1|246243|ribonuclease H1	AF048994|RNASEH1|246243|ribonuclease H1	AK096913|RNASEH1|246243|ribonuclease H1	AF048995|RNASEH1|246243|ribonuclease H1	AK075490|RNASEH1|246243|ribonuclease H1
hg18_v1_chr17_-_16816113_16816145	0.00894772	SOX2.p2	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B
hg18_v1_chr17_-_74432800_74433047	0.00894586	SOX2.p2	M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2	J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2	S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2	BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2
hg18_v1_chr16_+_87741416_87741478	0.00891595	SOX2.p2	
hg18_v1_chr4_-_122213018_122213143	0.00884657	SOX2.p2	BC019351|C4orf31|79625|chromosome 4 open reading frame 31	AK289615|C4orf31|79625|chromosome 4 open reading frame 31	NM_024574|C4orf31|79625|chromosome 4 open reading frame 31
hg18_v1_chr1_+_171950759_171950854	0.00882307	SOX2.p2	AB026190|KLHL20|27252|kelch-like 20 (Drosophila)	BC063418|KLHL20|27252|kelch-like 20 (Drosophila)
hg18_v1_chr3_-_102522093_102522131	0.0087602	SOX2.p2	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2	NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2
hg18_v1_chr3_+_52694975_52695148	0.00875688	SOX2.p2	AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR607914|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR598596|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	CR608648|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)	EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)
hg18_v1_chr15_+_38648823_38649063	0.00875545	SOX2.p2	AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	CR624718|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2
hg18_v1_chr9_+_130684248_130684299	0.0087447	SOX2.p2	AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A	BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A
hg18_v1_chr18_-_20106187_20106193	0.00870878	SOX2.p2	AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A	NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A
hg18_v1_chr6_+_12825818_12825911	0.0086879	SOX2.p2	AK090769|PHACTR1|221692|phosphatase and actin regulator 1	NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	AB051520|PHACTR1|221692|phosphatase and actin regulator 1	BC101526|PHACTR1|221692|phosphatase and actin regulator 1	BC101528|PHACTR1|221692|phosphatase and actin regulator 1
hg18_v1_chr1_+_13615388_13615388	0.00868615	SOX2.p2	NM_001100114|PRAMEF21|391001|PRAME family member 21
hg18_v1_chr2_+_1396239_1396285	0.00863682	SOX2.p2	BC063107|TPO|7173|thyroid peroxidase	NM_000547|TPO|7173|thyroid peroxidase	NM_175719|TPO|7173|thyroid peroxidase	BC095448|TPO|7173|thyroid peroxidase	M17755|TPO|7173|thyroid peroxidase	J02969|TPO|7173|thyroid peroxidase	J02970|TPO|7173|thyroid peroxidase	X17358|TPO|7173|thyroid peroxidase	Y00406|TPO|7173|thyroid peroxidase
hg18_v1_chr2_+_114363919_114364115	0.00856565	SOX2.p2	BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)
hg18_v1_chr14_-_72430545_72430578	0.00853024	SOX2.p2	AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3	EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3	AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3	BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3	NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3
hg18_v1_chr12_-_7709734_7709768	0.00843595	SOX2.p2	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
hg18_v1_chr7_+_27746231_27746267	0.00842711	SOX2.p2	NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg18_v1_chr1_+_76312962_76313138	0.00841837	SOX2.p2	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg18_v1_chr5_+_99898922_99899022	0.0083975	SOX2.p2	AY359108|FAM174A|345757|family with sequence similarity 174, member A	AK289539|FAM174A|345757|family with sequence similarity 174, member A	CR601145|FAM174A|345757|family with sequence similarity 174, member A	BC027332|FAM174A|345757|family with sequence similarity 174, member A	NM_198507|FAM174A|345757|family with sequence similarity 174, member A
hg18_v1_chr7_-_35701287_35701320	0.00839047	SOX2.p2	NM_022373|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr20_+_56989717_56989772	0.00838789	SOX2.p2	BC014952|TH1L|51497|TH1-like (Drosophila)	BX647417|TH1L|51497|TH1-like (Drosophila)	AJ238379|TH1L|51497|TH1-like (Drosophila)	AF161479|TH1L|51497|TH1-like (Drosophila)	AK023927|TH1L|51497|TH1-like (Drosophila)	AK023310|TH1L|51497|TH1-like (Drosophila)	CR615187|TH1L|51497|TH1-like (Drosophila)	AK001316|TH1L|51497|TH1-like (Drosophila)
hg18_v1_chr19_+_63053031_63053218	0.00838117	SOX2.p2	AK027616|ZNF587|84914|zinc finger protein 587	NM_032828|ZNF587|84914|zinc finger protein 587	BC126237|ZNF587|84914|zinc finger protein 587	BC126239|ZNF587|84914|zinc finger protein 587	BC144112|ZNF587|84914|zinc finger protein 587	BC144113|ZNF587|84914|zinc finger protein 587
hg18_v1_chr20_+_51023159_51023212	0.00837752	SOX2.p2	AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2
hg18_v1_chr10_-_33264491_33264491	0.00836575	SOX2.p2	AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg18_v1_chr6_-_137582237_137582239	0.00836246	SOX2.p2	BC005333|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr22_-_30072217_30072314	0.00834116	SOX2.p2	AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr1_+_107400789_107400988	0.00833499	SOX2.p2	NM_018137|PRMT6|55170|protein arginine methyltransferase 6	BC073866|PRMT6|55170|protein arginine methyltransferase 6	AK226009|PRMT6|55170|protein arginine methyltransferase 6	AK295541|PRMT6|55170|protein arginine methyltransferase 6	AK297898|PRMT6|55170|protein arginine methyltransferase 6	AY043278|PRMT6|55170|protein arginine methyltransferase 6	CR621406|PRMT6|55170|protein arginine methyltransferase 6	BC013866|PRMT6|55170|protein arginine methyltransferase 6	AK001421|PRMT6|55170|protein arginine methyltransferase 6	BC002729|PRMT6|55170|protein arginine methyltransferase 6	BC063446|PRMT6|55170|protein arginine methyltransferase 6
hg18_v1_chr6_+_73133152_73133205	0.00829837	SOX2.p2	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1	AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1
hg18_v1_chr1_+_153213740_153213766	0.00829236	SOX2.p2	NM_001826|CKS1B|1163|CDC28 protein kinase regulatory subunit 1B
hg18_v1_chr6_-_15356865_15356895	0.00828653	SOX2.p2	
hg18_v1_chr17_+_55854636_55854687	0.00827761	SOX2.p2	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64	BC036356|C17orf64|124773|chromosome 17 open reading frame 64	BC048806|C17orf64|124773|chromosome 17 open reading frame 64
hg18_v1_chr1_+_50348052_50348199	0.00826263	SOX2.p2	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
hg18_v1_chr10_+_103995248_103995295	0.00824923	SOX2.p2	BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr2_+_95432150_95432262	0.00824829	SOX2.p2	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	CR623858|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A	BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A
hg18_v1_chr4_+_41309668_41309684	0.00819433	SOX2.p2	AK298915|LIMCH1|22998|LIM and calponin homology domains 1	AK299297|LIMCH1|22998|LIM and calponin homology domains 1	BC068200|LIMCH1|22998|LIM and calponin homology domains 1	BX537916|LIMCH1|22998|LIM and calponin homology domains 1	CR749205|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1	NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1
hg18_v1_chr12_-_21702000_21702019	0.00815119	SOX2.p2	AK129881|LDHB|3945|lactate dehydrogenase B	CR602865|LDHB|3945|lactate dehydrogenase B	CR612775|LDHB|3945|lactate dehydrogenase B
hg18_v1_chr11_-_107234733_107234863	0.00812513	SOX2.p2	AK300582|SLC35F2|54733|solute carrier family 35, member F2	BC039195|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr14_+_19993129_19993165	0.00812444	SOX2.p2	NM_001641|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080648|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1	NM_080649|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr16_+_65196125_65196129	0.00811772	SOX2.p2	CR621105|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR625182|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr16_-_28457728_28457818	0.00807908	SOX2.p2	BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1	CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1	BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1	AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1
hg18_v1_chrX_-_13248438_13248438	0.00807827	SOX2.p2	AK302365|ATXN3L|92552|ataxin 3-like	NM_001135995|ATXN3L|92552|ataxin 3-like
hg18_v1_chr3_-_47798423_47798599	0.00806865	SOX2.p2	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg18_v1_chr6_-_166502119_166502120	0.00805722	SOX2.p2	BC098425|T|6862|T, brachyury homolog (mouse)	NM_003181|T|6862|T, brachyury homolog (mouse)
hg18_v1_chr2_+_189547323_189547356	0.00802529	SOX2.p2	AK308010|COL3A1|1281|collagen, type III, alpha 1	NM_000090|COL3A1|1281|collagen, type III, alpha 1	BC028178|COL3A1|1281|collagen, type III, alpha 1
hg18_v1_chr20_-_33793507_33793590	0.00802126	SOX2.p2	BC008204|RBM39|9584|RNA binding motif protein 39	BC141835|RBM39|9584|RNA binding motif protein 39	BC158172|RBM39|9584|RNA binding motif protein 39	AK303910|RBM39|9584|RNA binding motif protein 39	AK297060|RBM39|9584|RNA binding motif protein 39	AL833168|RBM39|9584|RNA binding motif protein 39	CR619114|RBM39|9584|RNA binding motif protein 39	AK299165|RBM39|9584|RNA binding motif protein 39	CR749443|RBM39|9584|RNA binding motif protein 39	AK299678|RBM39|9584|RNA binding motif protein 39	BX640714|RBM39|9584|RNA binding motif protein 39	BX640812|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr10_-_127397990_127398058	0.00801445	SOX2.p2	AK094354|FLJ37035|399821|hypothetical LOC399821
hg18_v1_chr3_-_95264756_95264756	0.00800033	SOX2.p2	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1	NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr16_+_79626817_79627211	0.00798081	SOX2.p2	CR624345|ATMIN|23300|ATM interactor	NM_015251|ATMIN|23300|ATM interactor	BC002701|ATMIN|23300|ATM interactor	AK290943|ATMIN|23300|ATM interactor
hg18_v1_chr20_+_34635362_34635469	0.00795669	SOX2.p2	AK313919|TGIF2|60436|TGFB-induced factor homeobox 2	NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2	AB042646|TGIF2|60436|TGFB-induced factor homeobox 2	BC006549|TGIF2|60436|TGFB-induced factor homeobox 2	BC012816|TGIF2|60436|TGFB-induced factor homeobox 2	AK074802|TGIF2|60436|TGFB-induced factor homeobox 2
hg18_v1_chr4_+_113778060_113778174	0.00795236	SOX2.p2	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7
hg18_v1_chr2_-_127694123_127694251	0.00793949	SOX2.p2	AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1
hg18_v1_chr12_-_25041639_25041719	0.00793709	SOX2.p2	BC035880|C12orf77|196415|chromosome 12 open reading frame 77	NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77	BC046192|C12orf77|196415|chromosome 12 open reading frame 77	BC062789|C12orf77|196415|chromosome 12 open reading frame 77
hg18_v1_chr13_-_48916144_48916221	0.00793594	SOX2.p2	AY211923|CAB39L|81617|calcium binding protein 39-like	AY288977|CAB39L|81617|calcium binding protein 39-like	BX647518|CAB39L|81617|calcium binding protein 39-like	NM_001079670|CAB39L|81617|calcium binding protein 39-like
hg18_v1_chr2_+_17798860_17798924	0.00792677	SOX2.p2	CR936783|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	NM_001130009|GEN1|348654|Gen homolog 1, endonuclease (Drosophila)	AK093631|LOC284952|284952|hypothetical protein LOC284952
hg18_v1_chr4_+_72423633_72423829	0.00792236	SOX2.p2	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4
hg18_v1_chr2_-_3583793_3583799	0.00788887	SOX2.p2	BC002973|RNASEH1|246243|ribonuclease H1
hg18_v1_chr3_+_134985566_134985566	0.00786906	SOX2.p2	NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit
hg18_v1_chr6_+_144206165_144206200	0.00781469	SOX2.p2	CR593625|LTV1|84946|LTV1 homolog (S. cerevisiae)	BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)	NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)
hg18_v1_chr3_+_47819402_47819629	0.00776208	SOX2.p2	BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr19_+_11936868_11936896	0.00775687	SOX2.p2	AK092240|ZNF763|284390|zinc finger protein 763	AK299224|ZNF763|284390|zinc finger protein 763	NM_001012753|ZNF763|284390|zinc finger protein 763	BC105711|ZNF763|284390|zinc finger protein 763	BC105712|ZNF763|284390|zinc finger protein 763	BC105713|ZNF763|284390|zinc finger protein 763
hg18_v1_chr6_-_16869579_16869773	0.00775218	SOX2.p2	BC039236|ATXN1|6310|ataxin 1	BC014548|ATXN1|6310|ataxin 1	X79204|ATXN1|6310|ataxin 1	AK311274|ATXN1|6310|ataxin 1	BC063120|ATXN1|6310|ataxin 1	BC047894|ATXN1|6310|ataxin 1	NM_000332|ATXN1|6310|ataxin 1	NM_001128164|ATXN1|6310|ataxin 1	BC011026|ATXN1|6310|ataxin 1
hg18_v1_chr4_+_55218663_55219119	0.00774151	SOX2.p2	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg18_v1_chr1_-_202432165_202432250	0.00770473	SOX2.p2	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor	CR618718|KISS1|3814|KiSS-1 metastasis-suppressor	BC022819|KISS1|3814|KiSS-1 metastasis-suppressor	CR603087|KISS1|3814|KiSS-1 metastasis-suppressor	CR609203|KISS1|3814|KiSS-1 metastasis-suppressor	CR622101|KISS1|3814|KiSS-1 metastasis-suppressor	CR625917|KISS1|3814|KiSS-1 metastasis-suppressor	AK291695|KISS1|3814|KiSS-1 metastasis-suppressor	NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor	CR594921|KISS1|3814|KiSS-1 metastasis-suppressor
hg18_v1_chr19_+_10515591_10515765	0.0076965	SOX2.p2	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)	AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)
hg18_v1_chr17_+_38916758_38916888	0.00769234	SOX2.p2	AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg18_v1_chr19_+_9799587_9799639	0.00768496	SOX2.p2	AK309258|UBL5|59286|ubiquitin-like 5	CR590001|UBL5|59286|ubiquitin-like 5	CR593093|UBL5|59286|ubiquitin-like 5	AF313915|UBL5|59286|ubiquitin-like 5	BC007053|UBL5|59286|ubiquitin-like 5	CR606232|UBL5|59286|ubiquitin-like 5	BC110839|UBL5|59286|ubiquitin-like 5
hg18_v1_chr6_-_32227645_32227677	0.00766899	SOX2.p2	BC063046|PRRT1|80863|proline-rich transmembrane protein 1	AK123424|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr16_+_21597335_21597338	0.00766725	SOX2.p2	BC129993|OTOA|146183|otoancorin	NM_144672|OTOA|146183|otoancorin	BC129992|OTOA|146183|otoancorin
hg18_v1_chr6_-_31741369_31741386	0.00766638	SOX2.p2	CR618833|GPANK1|7918|G patch domain and ankyrin repeats 1
hg18_v1_chrX_+_44588192_44588322	0.00765791	SOX2.p2	AF533018|DUSP21|63904|dual specificity phosphatase 21	NM_022076|DUSP21|63904|dual specificity phosphatase 21	AF143321|DUSP21|63904|dual specificity phosphatase 21	AY121807|DUSP21|63904|dual specificity phosphatase 21	AY156515|DUSP21|63904|dual specificity phosphatase 21	BC119755|DUSP21|63904|dual specificity phosphatase 21	BC119756|DUSP21|63904|dual specificity phosphatase 21	CR457159|DUSP21|63904|dual specificity phosphatase 21
hg18_v1_chr22_-_30072329_30072340	0.00765204	SOX2.p2	BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1
hg18_v1_chr9_-_122728993_122728993	0.00763831	SOX2.p2	AK090468|TRAF1|7185|TNF receptor-associated factor 1	NM_005658|TRAF1|7185|TNF receptor-associated factor 1
hg18_v1_chr1_-_152422309_152422319	0.00762175	SOX2.p2	AK308007|TPM3|7170|tropomyosin 3
hg18_v1_chr3_+_198961160_198961246	0.007598	SOX2.p2	AL136558|FYTTD1|84248|forty-two-three domain containing 1	AK315019|FYTTD1|84248|forty-two-three domain containing 1	AJ344094|FYTTD1|84248|forty-two-three domain containing 1	AK296283|FYTTD1|84248|forty-two-three domain containing 1	AM393053|FYTTD1|84248|forty-two-three domain containing 1	CR533502|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr10_-_118755077_118755128	0.0075938	SOX2.p2	NM_001127211|KIAA1598|57698|KIAA1598	NM_018330|KIAA1598|57698|KIAA1598	AK091381|KIAA1598|57698|KIAA1598
hg18_v1_chr12_+_100795480_100795698	0.007592	SOX2.p2	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1	AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr6_+_43846372_43846652	0.00757832	SOX2.p2	BC011177|VEGFA|7422|vascular endothelial growth factor A	BC065522|VEGFA|7422|vascular endothelial growth factor A
hg18_v1_chr11_+_131286513_131286585	0.00756275	SOX2.p2	EF043567|NTM|50863|neurotrimin	BC050716|NTM|50863|neurotrimin
hg18_v1_chr6_-_111243100_111243122	0.00753888	SOX2.p2	BC037289|CDK19|23097|cyclin-dependent kinase 19	NM_015076|CDK19|23097|cyclin-dependent kinase 19	AK292360|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr10_+_103995297_103995417	0.00750457	SOX2.p2	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1
hg18_v1_chr1_-_154988647_154988863	0.0075023	SOX2.p2	NM_001126051|HDGF|3068|hepatoma-derived growth factor	AK096411|HDGF|3068|hepatoma-derived growth factor	AK304468|HDGF|3068|hepatoma-derived growth factor	NM_001126050|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr1_+_160734259_160734414	0.00749792	SOX2.p2	AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1	AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1
hg18_v1_chr1_-_174442999_174443000	0.00745219	SOX2.p2	AF527539|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr17_-_3518568_3518627	0.00741746	SOX2.p2	AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR607043|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR619400|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606577|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR609956|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR591740|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR601638|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR602958|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3	CR606404|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg18_v1_chr5_+_180258682_180258879	0.00738738	SOX2.p2	NM_001040462|BTNL8|79908|butyrophilin-like 8	NM_001159707|BTNL8|79908|butyrophilin-like 8	NM_001159708|BTNL8|79908|butyrophilin-like 8	NM_001159709|BTNL8|79908|butyrophilin-like 8	NM_024850|BTNL8|79908|butyrophilin-like 8	AK296597|BTNL8|79908|butyrophilin-like 8	AY358523|BTNL8|79908|butyrophilin-like 8	AK025111|BTNL8|79908|butyrophilin-like 8	AK225213|BTNL8|79908|butyrophilin-like 8	BC119696|BTNL8|79908|butyrophilin-like 8	BC119697|BTNL8|79908|butyrophilin-like 8
hg18_v1_chr1_-_115102138_115102193	0.00731652	SOX2.p2	NM_001007553|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_007158|CSDE1|7812|cold shock domain containing E1, RNA-binding	NM_001130523|CSDE1|7812|cold shock domain containing E1, RNA-binding
hg18_v1_chr1_-_31485320_31485324	0.00729877	SOX2.p2	NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1
hg18_v1_chr4_+_78298326_78298709	0.00729864	SOX2.p2	L49506|CCNG2|901|cyclin G2	AK293899|CCNG2|901|cyclin G2	BT019503|CCNG2|901|cyclin G2	CR542181|CCNG2|901|cyclin G2	CR542200|CCNG2|901|cyclin G2	DQ890836|CCNG2|901|cyclin G2	DQ893991|CCNG2|901|cyclin G2
hg18_v1_chr16_+_68353738_68353777	0.00729339	SOX2.p2	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr17_-_17125314_17125346	0.00728292	SOX2.p2	BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR600698|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR616766|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chrX_-_130250715_130250715	0.00727809	SOX2.p2	BC028312|IGSF1|3547|immunoglobulin superfamily, member 1	NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1
hg18_v1_chr5_-_177986695_177986763	0.00726513	SOX2.p2	AK308674|CLK4|57396|CDC-like kinase 4
hg18_v1_chr2_-_85642061_85642144	0.00722235	SOX2.p2	DQ892948|GGCX|2677|gamma-glutamyl carboxylase	DQ896196|GGCX|2677|gamma-glutamyl carboxylase	EU847509|GGCX|2677|gamma-glutamyl carboxylase	CR607119|GGCX|2677|gamma-glutamyl carboxylase	BC013979|GGCX|2677|gamma-glutamyl carboxylase	AK310483|GGCX|2677|gamma-glutamyl carboxylase	AK297397|GGCX|2677|gamma-glutamyl carboxylase	BC004422|GGCX|2677|gamma-glutamyl carboxylase	AK222827|GGCX|2677|gamma-glutamyl carboxylase	AK225663|GGCX|2677|gamma-glutamyl carboxylase	AK298982|GGCX|2677|gamma-glutamyl carboxylase	AK313126|GGCX|2677|gamma-glutamyl carboxylase	M81592|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr6_-_79844658_79844894	0.00720421	SOX2.p2	AK057039|PHIP|55023|pleckstrin homology domain interacting protein	NM_017934|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chr20_+_6696744_6696744	0.00718484	SOX2.p2	BC069214|BMP2|650|bone morphogenetic protein 2	NM_001200|BMP2|650|bone morphogenetic protein 2
hg18_v1_chr17_-_24426752_24426752	0.00717331	SOX2.p2	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1	NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1
hg18_v1_chr2_-_163403274_163403467	0.00716279	SOX2.p2	AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg18_v1_chrX_-_74659810_74659877	0.00714899	SOX2.p2	AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr2_-_32118323_32118422	0.00712951	SOX2.p2	AF226998|DPY30|84661|dpy-30 homolog (C. elegans)	NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)	BC015970|DPY30|84661|dpy-30 homolog (C. elegans)
hg18_v1_chr9_-_99724559_99724672	0.00709515	SOX2.p2	CR605882|C9orf156|51531|chromosome 9 open reading frame 156	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156	DQ896231|C9orf156|51531|chromosome 9 open reading frame 156	AY189280|C9orf156|51531|chromosome 9 open reading frame 156	AF151053|C9orf156|51531|chromosome 9 open reading frame 156	CR620447|C9orf156|51531|chromosome 9 open reading frame 156	AK309270|C9orf156|51531|chromosome 9 open reading frame 156	BC002863|C9orf156|51531|chromosome 9 open reading frame 156	CR604210|C9orf156|51531|chromosome 9 open reading frame 156	AK000213|C9orf156|51531|chromosome 9 open reading frame 156	AK302701|C9orf156|51531|chromosome 9 open reading frame 156	NM_016481|C9orf156|51531|chromosome 9 open reading frame 156
hg18_v1_chr6_-_108385905_108385995	0.00708983	SOX2.p2	AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)	BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)	AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)
hg18_v1_chr1_+_82038669_82038669	0.00706992	SOX2.p2	AF104266|LPHN2|23266|latrophilin 2	AF104938|LPHN2|23266|latrophilin 2	AF104939|LPHN2|23266|latrophilin 2	NM_012302|LPHN2|23266|latrophilin 2
hg18_v1_chr6_-_47385470_47385598	0.00706738	SOX2.p2	BC021572|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	AY358304|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr3_+_101694244_101694302	0.00705753	SOX2.p2	AK129789|TMEM45A|55076|transmembrane protein 45A
hg18_v1_chr5_-_157011665_157011748	0.00705295	SOX2.p2	
hg18_v1_chr6_+_62341966_62341966	0.00702206	SOX2.p2	NM_001190706|MTRNR2L9|100463487|MT-RNR2-like 9
hg18_v1_chr12_-_9976173_9976246	0.00698649	SOX2.p2	EU095393|CLEC2A|387836|C-type lectin domain family 2, member A	EU095394|CLEC2A|387836|C-type lectin domain family 2, member A	AY359126|CLEC2A|387836|C-type lectin domain family 2, member A	EF127467|CLEC2A|387836|C-type lectin domain family 2, member A	NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A
hg18_v1_chr19_-_9799469_9799539	0.00696276	SOX2.p2	CR592319|FBXL12|54850|F-box and leucine-rich repeat protein 12	CR614447|FBXL12|54850|F-box and leucine-rich repeat protein 12
hg18_v1_chr13_+_31318828_31318977	0.00696234	SOX2.p2	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3
hg18_v1_chr6_-_31736488_31736545	0.00691758	SOX2.p2	AJ245433|C6orf47|57827|chromosome 6 open reading frame 47	BC063584|C6orf47|57827|chromosome 6 open reading frame 47	BC012950|C6orf47|57827|chromosome 6 open reading frame 47	NM_021184|C6orf47|57827|chromosome 6 open reading frame 47
hg18_v1_chr1_+_119712918_119713016	0.00691732	SOX2.p2	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)	NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)	BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)	AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)
hg18_v1_chr1_-_23758503_23758640	0.00683918	SOX2.p2	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR612668|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR597388|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR615457|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	CR611504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg18_v1_chr18_+_19973445_19973448	0.00678398	SOX2.p2	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated
hg18_v1_chr11_+_10836339_10836385	0.00678312	SOX2.p2	BC014360|LOC729013|729013|hypothetical LOC729013	BC036635|LOC729013|729013|hypothetical LOC729013
hg18_v1_chr3_+_69895651_69895651	0.00673353	SOX2.p2	AB006988|MITF|4286|microphthalmia-associated transcription factor	NM_006722|MITF|4286|microphthalmia-associated transcription factor
hg18_v1_chr5_+_109052984_109053008	0.00672306	SOX2.p2	
hg18_v1_chr10_-_69661860_69661860	0.00671651	SOX2.p2	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)	NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)
hg18_v1_chr3_-_187138527_187138617	0.0067029	SOX2.p2	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)	NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr16_-_30453646_30453736	0.0066425	SOX2.p2	AB209546|ZNF747|65988|zinc finger protein 747	AK054567|ZNF747|65988|zinc finger protein 747	BC001361|ZNF747|65988|zinc finger protein 747	NM_023931|ZNF747|65988|zinc finger protein 747
hg18_v1_chr22_-_49317408_49317455	0.00654705	SOX2.p2	BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B	BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B
hg18_v1_chr15_+_43666867_43666932	0.00654318	SOX2.p2	AK057545|PLDN|26258|pallidin homolog (mouse)	BC004819|PLDN|26258|pallidin homolog (mouse)	AK315581|PLDN|26258|pallidin homolog (mouse)
hg18_v1_chr7_+_147667461_147667536	0.00653628	SOX2.p2	CR933671|CNTNAP2|26047|contactin associated protein-like 2	CR613191|CNTNAP2|26047|contactin associated protein-like 2
hg18_v1_chr9_-_115142354_115142440	0.00651712	SOX2.p2	AK074891|WDR31|114987|WD repeat domain 31	AL833635|WDR31|114987|WD repeat domain 31	BC022982|WDR31|114987|WD repeat domain 31	AK093240|WDR31|114987|WD repeat domain 31	BC012352|WDR31|114987|WD repeat domain 31	AK313843|WDR31|114987|WD repeat domain 31	NM_001012361|WDR31|114987|WD repeat domain 31	NM_145241|WDR31|114987|WD repeat domain 31
hg18_v1_chr1_-_198645695_198645785	0.00649965	SOX2.p2	AK297233|ZNF281|23528|zinc finger protein 281	AK022916|ZNF281|23528|zinc finger protein 281	AK094701|ZNF281|23528|zinc finger protein 281
hg18_v1_chr5_+_55069601_55069665	0.00649152	SOX2.p2	NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
hg18_v1_chr11_+_94439703_94439929	0.00648028	SOX2.p2	NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8	AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8	AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8
hg18_v1_chr13_-_29067795_29067846	0.0064789	SOX2.p2	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg18_v1_chr14_-_105206106_105206249	0.00646755	SOX2.p2	
hg18_v1_chr3_-_145049853_145050062	0.00645885	SOX2.p2	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9
hg18_v1_chr1_-_13483073_13483141	0.00644632	SOX2.p2	NM_001012277|PRAMEF7|441871|PRAME family member 7	BC144565|PRAMEF7|441871|PRAME family member 7
hg18_v1_chr9_-_103540682_103540763	0.00644178	SOX2.p2	AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg18_v1_chr7_-_44854145_44854179	0.00643532	SOX2.p2	BC014885|H2AFV|94239|H2A histone family, member V	AB209001|H2AFV|94239|H2A histone family, member V	AK129989|H2AFV|94239|H2A histone family, member V	BC000098|H2AFV|94239|H2A histone family, member V	BC070169|H2AFV|94239|H2A histone family, member V
hg18_v1_chr4_-_70539922_70539948	0.0064316	SOX2.p2	NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2	FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2
hg18_v1_chr2_+_127130209_127130315	0.00637953	SOX2.p2	CR600006|GYPC|2995|glycophorin C (Gerbich blood group)	CR622291|GYPC|2995|glycophorin C (Gerbich blood group)	CR600264|GYPC|2995|glycophorin C (Gerbich blood group)	CR614686|GYPC|2995|glycophorin C (Gerbich blood group)	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)	M11802|GYPC|2995|glycophorin C (Gerbich blood group)	M36284|GYPC|2995|glycophorin C (Gerbich blood group)	X51973|GYPC|2995|glycophorin C (Gerbich blood group)	M28335|GYPC|2995|glycophorin C (Gerbich blood group)
hg18_v1_chr8_+_60194328_60194331	0.00637543	SOX2.p2	
hg18_v1_chr16_+_24458349_24458440	0.00634238	SOX2.p2	NM_006910|RBBP6|5930|retinoblastoma binding protein 6	NM_018703|RBBP6|5930|retinoblastoma binding protein 6	NM_032626|RBBP6|5930|retinoblastoma binding protein 6
hg18_v1_chr7_-_26206891_26206943	0.00634221	SOX2.p2	BX537494|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_002137|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	NM_031243|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr16_+_30326864_30326977	0.0063301	SOX2.p2	AF242768|ZNF771|51333|zinc finger protein 771
hg18_v1_chr11_-_118167065_118167065	0.006328	SOX2.p2	BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr4_-_113656762_113656786	0.00632334	SOX2.p2	CR615296|NEUROG2|63973|neurogenin 2	BC036847|NEUROG2|63973|neurogenin 2	NM_024019|NEUROG2|63973|neurogenin 2
hg18_v1_chr6_-_89729989_89730065	0.00631046	SOX2.p2	AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr11_-_82675024_82675082	0.00623324	SOX2.p2	AF271782|CCDC90B|60492|coiled-coil domain containing 90B	NM_021825|CCDC90B|60492|coiled-coil domain containing 90B	BC048795|CCDC90B|60492|coiled-coil domain containing 90B	AK304769|CCDC90B|60492|coiled-coil domain containing 90B	AK315787|CCDC90B|60492|coiled-coil domain containing 90B	BC107755|CCDC90B|60492|coiled-coil domain containing 90B
hg18_v1_chr16_+_66398477_66398563	0.00623209	SOX2.p2	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1	NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1	BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1	AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1
hg18_v1_chr19_+_7608015_7608017	0.00622539	SOX2.p2	CR611137|STXBP2|6813|syntaxin binding protein 2	CR597245|STXBP2|6813|syntaxin binding protein 2	CR613567|STXBP2|6813|syntaxin binding protein 2	CR625756|STXBP2|6813|syntaxin binding protein 2	CR626453|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr5_-_96504258_96504331	0.00622422	SOX2.p2	AK291034|LIX1|167410|Lix1 homolog (chicken)	NM_153234|LIX1|167410|Lix1 homolog (chicken)	AK098400|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr5_-_134763464_134763480	0.00622058	SOX2.p2	BC013331|H2AFY|9555|H2A histone family, member Y	AF054174|H2AFY|9555|H2A histone family, member Y	NM_004893|H2AFY|9555|H2A histone family, member Y
hg18_v1_chr2_-_70166903_70166922	0.00617539	SOX2.p2	AK056822|LOC400960|400960|hypothetical LOC400960
hg18_v1_chr15_-_80611897_80611999	0.00615122	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chr10_-_33663984_33664025	0.00614566	SOX2.p2	BX648025|NRP1|8829|neuropilin 1
hg18_v1_chr9_+_35819208_35819279	0.00613943	SOX2.p2	NM_016446|TMEM8B|51754|transmembrane protein 8B	BC043384|TMEM8B|51754|transmembrane protein 8B	NM_001042589|TMEM8B|51754|transmembrane protein 8B	CR608738|TMEM8B|51754|transmembrane protein 8B	AF188239|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr11_-_18566758_18566897	0.00613846	SOX2.p2	AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	CR616778|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains	AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains
hg18_v1_chr14_+_66896830_66896838	0.00613004	SOX2.p2	BC002513|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR600389|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	CR604321|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr15_+_45797977_45797977	0.00609583	SOX2.p2	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg18_v1_chr6_-_111243023_111243067	0.00607596	SOX2.p2	AB028951|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_-_27099524_27099552	0.00605319	SOX2.p2	BC007767|GPATCH3|63906|G patch domain containing 3	CR619450|GPATCH3|63906|G patch domain containing 3	AL833886|GPATCH3|63906|G patch domain containing 3	AK308100|GPATCH3|63906|G patch domain containing 3	AK022517|GPATCH3|63906|G patch domain containing 3	AK057930|GPATCH3|63906|G patch domain containing 3	AK303183|GPATCH3|63906|G patch domain containing 3	CR936767|GPATCH3|63906|G patch domain containing 3	NM_022078|GPATCH3|63906|G patch domain containing 3
hg18_v1_chr11_+_89458765_89458765	0.00599175	SOX2.p2	NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1
hg18_v1_chr6_+_149109841_149109963	0.00598884	SOX2.p2	NM_005715|UST|10090|uronyl-2-sulfotransferase
hg18_v1_chr15_-_97608922_97608957	0.00597203	SOX2.p2	AK023230|TTC23|64927|tetratricopeptide repeat domain 23	AK291690|TTC23|64927|tetratricopeptide repeat domain 23
hg18_v1_chr12_+_32003648_32003674	0.0059661	SOX2.p2	AK092399|C12orf35|55196|chromosome 12 open reading frame 35	BC140819|C12orf35|55196|chromosome 12 open reading frame 35
hg18_v1_chr16_-_8870343_8870379	0.00595437	SOX2.p2	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa
hg18_v1_chr4_-_84150885_84150986	0.00593456	SOX2.p2	BC109278|LIN54|132660|lin-54 homolog (C. elegans)	BC109277|LIN54|132660|lin-54 homolog (C. elegans)	BX537919|LIN54|132660|lin-54 homolog (C. elegans)	AK294256|LIN54|132660|lin-54 homolog (C. elegans)
hg18_v1_chr2_+_37165097_37165206	0.00592843	SOX2.p2	NM_174931|CCDC75|253635|coiled-coil domain containing 75	AK095667|CCDC75|253635|coiled-coil domain containing 75	BC071798|CCDC75|253635|coiled-coil domain containing 75	AK289504|CCDC75|253635|coiled-coil domain containing 75	AK294697|CCDC75|253635|coiled-coil domain containing 75
hg18_v1_chr13_-_73605914_73606066	0.00589724	SOX2.p2	AF161471|KLF12|11278|Kruppel-like factor 12	AF113122|KLF12|11278|Kruppel-like factor 12	NM_007249|KLF12|11278|Kruppel-like factor 12
hg18_v1_chr10_+_104253716_104253903	0.00589574	SOX2.p2	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)	BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)	AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)	AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)	AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)	AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)	AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)	DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)	AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)
hg18_v1_chr1_+_43628186_43628226	0.00588165	SOX2.p2	BC051343|C1orf84|149469|chromosome 1 open reading frame 84	AK091821|C1orf84|149469|chromosome 1 open reading frame 84
hg18_v1_chr17_-_47590669_47590705	0.00585742	SOX2.p2	AK294652|CA10|56934|carbonic anhydrase X	AK313001|CA10|56934|carbonic anhydrase X
hg18_v1_chr17_-_5312784_5312873	0.00585581	SOX2.p2	BC030017|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK295074|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33
hg18_v1_chr20_-_33793591_33793591	0.00584824	SOX2.p2	BX537770|RBM39|9584|RNA binding motif protein 39
hg18_v1_chr15_-_40628202_40628283	0.00583785	SOX2.p2	BX538324|LRRC57|255252|leucine rich repeat containing 57	BC051262|LRRC57|255252|leucine rich repeat containing 57	BC058935|LRRC57|255252|leucine rich repeat containing 57	AK094131|LRRC57|255252|leucine rich repeat containing 57	CR749223|LRRC57|255252|leucine rich repeat containing 57	AK309861|LRRC57|255252|leucine rich repeat containing 57
hg18_v1_chr1_-_174442736_174442840	0.00581287	SOX2.p2	AF508940|RFWD2|64326|ring finger and WD repeat domain 2	AY509921|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr8_-_144313293_144313427	0.00579994	SOX2.p2	AK314139|LY6H|4062|lymphocyte antigen 6 complex, locus H	NM_001130478|LY6H|4062|lymphocyte antigen 6 complex, locus H
hg18_v1_chr3_-_147805715_147805799	0.0057915	SOX2.p2	BC157886|PLSCR5|389158|phospholipid scramblase family, member 5	BC171917|PLSCR5|389158|phospholipid scramblase family, member 5	CR591144|PLSCR5|389158|phospholipid scramblase family, member 5
hg18_v1_chr19_+_7608010_7608014	0.00578277	SOX2.p2	BC002869|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr11_-_70350509_70350520	0.0057569	SOX2.p2	AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chr5_+_109053034_109053054	0.00574488	SOX2.p2	NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1
hg18_v1_chr11_+_6475065_6475106	0.00569595	SOX2.p2	AK096944|DNHD1|144132|dynein heavy chain domain 1	NM_144666|DNHD1|144132|dynein heavy chain domain 1	NM_173589|DNHD1|144132|dynein heavy chain domain 1	BX648742|DNHD1|144132|dynein heavy chain domain 1
hg18_v1_chr2_-_170389598_170389665	0.00567541	SOX2.p2	BC000921|METTL5|29081|methyltransferase like 5	NM_014168|METTL5|29081|methyltransferase like 5	CR616340|METTL5|29081|methyltransferase like 5	AF201938|METTL5|29081|methyltransferase like 5	AF161482|METTL5|29081|methyltransferase like 5	AK001321|METTL5|29081|methyltransferase like 5	BC093014|METTL5|29081|methyltransferase like 5
hg18_v1_chr16_-_11587647_11587729	0.00565991	SOX2.p2	BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor	BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor	BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor	AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor	U77396|LITAF|9516|lipopolysaccharide-induced TNF factor
hg18_v1_chr15_-_84139021_84139181	0.00564639	SOX2.p2	AL136796|KLHL25|64410|kelch-like 25 (Drosophila)	BC028100|KLHL25|64410|kelch-like 25 (Drosophila)	AK056663|KLHL25|64410|kelch-like 25 (Drosophila)	AK315541|KLHL25|64410|kelch-like 25 (Drosophila)	AK092231|KLHL25|64410|kelch-like 25 (Drosophila)	AY764034|KLHL25|64410|kelch-like 25 (Drosophila)
hg18_v1_chr16_+_71256497_71256633	0.00564496	SOX2.p2	
hg18_v1_chr14_-_72995012_72995029	0.00564378	SOX2.p2	BX248781|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chr10_+_98582005_98582082	0.00562522	SOX2.p2	NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor	NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor	AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor	BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor
hg18_v1_chr11_+_112337411_112337422	0.00562472	SOX2.p2	X16841|NCAM1|4684|neural cell adhesion molecule 1
hg18_v1_chr10_-_88720908_88721047	0.0056108	SOX2.p2	AK128041|LOC100133190|100133190|hypothetical LOC100133190
hg18_v1_chr13_-_74953873_74954806	0.00558978	SOX2.p2	AB449885|TBC1D4|9882|TBC1 domain family, member 4	FM207106|TBC1D4|9882|TBC1 domain family, member 4	FM207107|TBC1D4|9882|TBC1 domain family, member 4	BC151239|TBC1D4|9882|TBC1 domain family, member 4	AB011175|TBC1D4|9882|TBC1 domain family, member 4	NM_014832|TBC1D4|9882|TBC1 domain family, member 4	AK307493|TBC1D4|9882|TBC1 domain family, member 4
hg18_v1_chr16_+_30326386_30326699	0.00557366	SOX2.p2	BC026192|ZNF771|51333|zinc finger protein 771	BC011870|ZNF771|51333|zinc finger protein 771
hg18_v1_chr17_-_45621140_45621160	0.00555578	SOX2.p2	
hg18_v1_chr15_+_77362200_77362200	0.0055523	SOX2.p2	AK127037|ANKRD34C|390616|ankyrin repeat domain 34C	NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C
hg18_v1_chr6_-_32227695_32227701	0.00553582	SOX2.p2	AK054885|PRRT1|80863|proline-rich transmembrane protein 1	NM_030651|PRRT1|80863|proline-rich transmembrane protein 1
hg18_v1_chr15_-_48434567_48434617	0.00552036	SOX2.p2	BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1
hg18_v1_chr14_-_49767840_49767861	0.00551827	SOX2.p2	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)	NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)
hg18_v1_chr6_-_137582244_137582259	0.00550528	SOX2.p2	NM_000416|IFNGR1|3459|interferon gamma receptor 1
hg18_v1_chr7_+_55400890_55401255	0.00547658	SOX2.p2	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR620619|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	CR619072|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg18_v1_chr6_-_89729846_89729974	0.00547621	SOX2.p2	AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr16_-_18480763_18480950	0.00545492	SOX2.p2	X57398|NOMO1|23420|NODAL modulator 1	BC065535|NOMO1|23420|NODAL modulator 1	BC028389|NOMO2|283820|NODAL modulator 2	AK225803|NOMO2|283820|NODAL modulator 2	BC041131|NOMO2|283820|NODAL modulator 2	AL832855|NOMO2|283820|NODAL modulator 2	NM_001004060|NOMO2|283820|NODAL modulator 2	NM_173614|NOMO2|283820|NODAL modulator 2
hg18_v1_chr2_-_56266408_56266418	0.00543776	SOX2.p2	AK311113|LOC100129434|100129434|hypothetical LOC100129434
hg18_v1_chr10_-_27483285_27483310	0.00543771	SOX2.p2	BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr12_-_101398451_101398453	0.00543004	SOX2.p2	AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr7_+_22733626_22733661	0.0054106	SOX2.p2	X04403|IL6|3569|interleukin 6 (interferon, beta 2)
hg18_v1_chr3_-_25681394_25681401	0.00540168	SOX2.p2	AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa
hg18_v1_chr6_+_33045070_33045089	0.00536647	SOX2.p2	
hg18_v1_chr3_-_187124290_187124429	0.00536441	SOX2.p2	AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr6_+_170457774_170457836	0.00531697	SOX2.p2	AB058741|FAM120B|84498|family with sequence similarity 120B	AL832883|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr2_-_157890400_157890661	0.00531292	SOX2.p2	AB033015|ERMN|57471|ermin, ERM-like protein	DQ334271|ERMN|57471|ermin, ERM-like protein	BC026345|ERMN|57471|ermin, ERM-like protein	AK295844|ERMN|57471|ermin, ERM-like protein	NM_020711|ERMN|57471|ermin, ERM-like protein
hg18_v1_chr12_+_56462794_56462885	0.00530282	SOX2.p2	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial	NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial	AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial	AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial	CR592271|TSFM|10102|Ts translation elongation factor, mitochondrial	BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial	AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial	AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial	BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial	AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial	CR622683|TSFM|10102|Ts translation elongation factor, mitochondrial	CR606259|TSFM|10102|Ts translation elongation factor, mitochondrial
hg18_v1_chr3_-_102714663_102714774	0.00529627	SOX2.p2	AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7	AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7	AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7	BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7	BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7	AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7	AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7	NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7
hg18_v1_chr11_-_65082705_65082828	0.00524939	SOX2.p2	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3
hg18_v1_chr16_-_11588257_11588324	0.00524779	SOX2.p2	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor	BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor	BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor	BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor	CR612710|LITAF|9516|lipopolysaccharide-induced TNF factor	BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor	CR612810|LITAF|9516|lipopolysaccharide-induced TNF factor	CR623629|LITAF|9516|lipopolysaccharide-induced TNF factor	AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor	AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor	AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor	NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor
hg18_v1_chr3_-_187138500_187138518	0.00522519	SOX2.p2	AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr12_-_70343943_70344015	0.0052188	SOX2.p2	NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr9_+_94127561_94127561	0.00521454	SOX2.p2	CR592049|CENPP|401541|centromere protein P	NM_001012267|CENPP|401541|centromere protein P
hg18_v1_chr12_+_381001_381083	0.00520619	SOX2.p2	NM_001130146|CCDC77|84318|coiled-coil domain containing 77	NM_032358|CCDC77|84318|coiled-coil domain containing 77	AK293165|CCDC77|84318|coiled-coil domain containing 77	CR618406|CCDC77|84318|coiled-coil domain containing 77	AK027638|CCDC77|84318|coiled-coil domain containing 77
hg18_v1_chr1_+_42701460_42701611	0.00519266	SOX2.p2	AL832217|CCDC30|728621|coiled-coil domain containing 30
hg18_v1_chr17_+_39503623_39503837	0.00517845	SOX2.p2	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR624359|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR601615|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR595523|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR623861|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607320|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR613351|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR590248|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR609384|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598130|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR608514|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR597546|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR622205|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR625794|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR615676|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR619652|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR598996|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR591259|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR605360|G6PC3|92579|glucose 6 phosphatase, catalytic, 3	CR607017|G6PC3|92579|glucose 6 phosphatase, catalytic, 3
hg18_v1_chr11_-_70350292_70350362	0.005173	SOX2.p2	AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2
hg18_v1_chrX_-_131181141_131181224	0.00516643	SOX2.p2	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family	AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family
hg18_v1_chr14_+_103099031_103099097	0.00515651	SOX2.p2	NM_032374|C14orf153|84334|chromosome 14 open reading frame 153	CR619996|C14orf153|84334|chromosome 14 open reading frame 153	AK223092|C14orf153|84334|chromosome 14 open reading frame 153	AK223103|C14orf153|84334|chromosome 14 open reading frame 153	BC007412|C14orf153|84334|chromosome 14 open reading frame 153
hg18_v1_chr17_-_30724732_30724832	0.00514564	SOX2.p2	AL831964|SLFN11|91607|schlafen family member 11	BC052586|SLFN11|91607|schlafen family member 11	AK092241|SLFN11|91607|schlafen family member 11	NM_001104587|SLFN11|91607|schlafen family member 11	NM_001104588|SLFN11|91607|schlafen family member 11	NM_001104589|SLFN11|91607|schlafen family member 11	NM_001104590|SLFN11|91607|schlafen family member 11	NM_152270|SLFN11|91607|schlafen family member 11
hg18_v1_chr4_-_40911212_40911440	0.00512464	SOX2.p2	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2
hg18_v1_chr6_-_111243199_111243215	0.00510532	SOX2.p2	AY028424|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr14_+_44674892_44674892	0.00508327	SOX2.p2	AK093422|FANCM|57697|Fanconi anemia, complementation group M
hg18_v1_chr16_-_29845024_29845031	0.00505457	SOX2.p2	AK289630|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr6_+_170457763_170457773	0.00505316	SOX2.p2	BC012177|FAM120B|84498|family with sequence similarity 120B	NM_032448|FAM120B|84498|family with sequence similarity 120B	AK296825|FAM120B|84498|family with sequence similarity 120B	AK296730|FAM120B|84498|family with sequence similarity 120B
hg18_v1_chr16_+_68016070_68016087	0.00501019	SOX2.p2	CR591022|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR599834|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR593982|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR601351|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR601527|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR610534|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR611151|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR611325|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR614836|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR591474|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr1_+_234625338_234625552	0.00499935	SOX2.p2	AK096339|EDARADD|128178|EDAR-associated death domain	NM_080738|EDARADD|128178|EDAR-associated death domain	AY028914|EDARADD|128178|EDAR-associated death domain	AK291930|EDARADD|128178|EDAR-associated death domain	BC006533|EDARADD|128178|EDAR-associated death domain	AY071862|EDARADD|128178|EDAR-associated death domain
hg18_v1_chrX_-_111953009_111953009	0.0049989	SOX2.p2	AY987378|AMOT|154796|angiomotin	NM_001113490|AMOT|154796|angiomotin
hg18_v1_chr1_-_230717850_230717934	0.00497642	SOX2.p2	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2
hg18_v1_chr4_+_68107039_68107122	0.00495627	SOX2.p2	AB023483|STAP1|26228|signal transducing adaptor family member 1	NM_012108|STAP1|26228|signal transducing adaptor family member 1	AK313676|STAP1|26228|signal transducing adaptor family member 1	BC014958|STAP1|26228|signal transducing adaptor family member 1
hg18_v1_chr8_-_38245694_38245932	0.00495396	SOX2.p2	CR591117|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606207|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR597379|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	CR606143|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B
hg18_v1_chr10_-_27483315_27483337	0.00494824	SOX2.p2	AK297973|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AJ132637|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_014263|YME1L1|10730|YME1-like 1 (S. cerevisiae)	NM_139312|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr6_-_111242981_111243003	0.00493967	SOX2.p2	AJ420571|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr1_-_43628060_43628071	0.00489558	SOX2.p2	NM_052877|MED8|112950|mediator complex subunit 8	NM_201542|MED8|112950|mediator complex subunit 8
hg18_v1_chrX_-_74660024_74660061	0.0048897	SOX2.p2	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15	NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr2_-_98714020_98714070	0.00488644	SOX2.p2	CR610346|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr13_-_35842289_35842316	0.00488074	SOX2.p2	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr10_-_104943000_104943074	0.00486235	SOX2.p2	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II	BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II	AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II	AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II	AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II	D38524|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II	NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II
hg18_v1_chr2_+_136005423_136005638	0.00485418	SOX2.p2	BC001217|R3HDM1|23518|R3H domain containing 1	D21852|R3HDM1|23518|R3H domain containing 1	BC041093|R3HDM1|23518|R3H domain containing 1	NM_015361|R3HDM1|23518|R3H domain containing 1
hg18_v1_chr13_-_110011866_110012080	0.00483471	SOX2.p2	AJ272065|RAB20|55647|RAB20, member RAS oncogene family	DQ892145|RAB20|55647|RAB20, member RAS oncogene family	DQ895340|RAB20|55647|RAB20, member RAS oncogene family	AK000436|RAB20|55647|RAB20, member RAS oncogene family	AK000446|RAB20|55647|RAB20, member RAS oncogene family	NM_017817|RAB20|55647|RAB20, member RAS oncogene family	BC026025|RAB20|55647|RAB20, member RAS oncogene family
hg18_v1_chr4_+_53986759_53986864	0.00483402	SOX2.p2	CR595922|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr20_+_17155680_17155950	0.00483234	SOX2.p2	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2
hg18_v1_chr20_+_1194959_1194998	0.00483119	SOX2.p2	BC035788|SNPH|9751|syntaphilin	NM_014723|SNPH|9751|syntaphilin	AB002372|SNPH|9751|syntaphilin	AF187733|SNPH|9751|syntaphilin
hg18_v1_chr12_+_103904203_103904237	0.0048247	SOX2.p2	NM_152318|C12orf45|121053|chromosome 12 open reading frame 45
hg18_v1_chr4_-_103485309_103485390	0.00481325	SOX2.p2	AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8
hg18_v1_chr7_-_99612757_99612970	0.00479415	SOX2.p2	AM392909|GPC2|221914|glypican 2	DQ893325|GPC2|221914|glypican 2	DQ896641|GPC2|221914|glypican 2	AL834418|GPC2|221914|glypican 2	AK096281|GPC2|221914|glypican 2	BC027972|GPC2|221914|glypican 2	NM_152742|GPC2|221914|glypican 2	AY093588|GPC2|221914|glypican 2
hg18_v1_chr6_-_2787068_2787095	0.00478505	SOX2.p2	CR626605|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	CR610741|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1
hg18_v1_chr13_+_23451919_23451948	0.00476944	SOX2.p2	BX648244|SPATA13|221178|spermatogenesis associated 13
hg18_v1_chr19_+_7607976_7608009	0.00476444	SOX2.p2	NM_001127396|STXBP2|6813|syntaxin binding protein 2	NM_006949|STXBP2|6813|syntaxin binding protein 2	AK303701|STXBP2|6813|syntaxin binding protein 2	CR601226|STXBP2|6813|syntaxin binding protein 2	CR611106|STXBP2|6813|syntaxin binding protein 2	CR617049|STXBP2|6813|syntaxin binding protein 2	AK314230|STXBP2|6813|syntaxin binding protein 2	AK222967|STXBP2|6813|syntaxin binding protein 2	AK222977|STXBP2|6813|syntaxin binding protein 2
hg18_v1_chr3_+_66094324_66094324	0.0047564	SOX2.p2	AK092495|SLC25A26|115286|solute carrier family 25, member 26	AX747571|SLC25A26|115286|solute carrier family 25, member 26	NM_173471|SLC25A26|115286|solute carrier family 25, member 26
hg18_v1_chr7_-_42243318_42243322	0.00475244	SOX2.p2	AK308429|GLI3|2737|GLI family zinc finger 3
hg18_v1_chr7_+_44802691_44802793	0.00474362	SOX2.p2	BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	CR594762|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)
hg18_v1_chr1_-_32600430_32600430	0.00474304	SOX2.p2	NM_001167676|LOC100128071|100128071|hypothetical LOC100128071
hg18_v1_chr6_-_47385313_47385382	0.004704	SOX2.p2	AB209394|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr2_-_224410444_224410542	0.00469847	SOX2.p2	AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr18_-_75812591_75812637	0.00467459	SOX2.p2	BC030140|PQLC1|80148|PQ loop repeat containing 1	CR602428|PQLC1|80148|PQ loop repeat containing 1
hg18_v1_chr1_+_216585298_216585370	0.00465612	SOX2.p2	NM_001135599|TGFB2|7042|transforming growth factor, beta 2	NM_003238|TGFB2|7042|transforming growth factor, beta 2	AB209842|TGFB2|7042|transforming growth factor, beta 2
hg18_v1_chr2_-_98646367_98646367	0.00465293	SOX2.p2	AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg18_v1_chr15_-_42743124_42743148	0.00463453	SOX2.p2	AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)	BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)
hg18_v1_chr8_+_30072513_30072570	0.00461936	SOX2.p2	AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR620833|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr15_+_31390454_31390468	0.00461386	SOX2.p2	AB001025|RYR3|6263|ryanodine receptor 3	AJ001515|RYR3|6263|ryanodine receptor 3	NM_001036|RYR3|6263|ryanodine receptor 3
hg18_v1_chr1_+_42920889_42920944	0.00460899	SOX2.p2	CR617953|YBX1|4904|Y box binding protein 1
hg18_v1_chr12_-_26169074_26169303	0.00457098	SOX2.p2	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41	AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41	AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41	BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41	NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41
hg18_v1_chrX_-_142550535_142550684	0.00457091	SOX2.p2	BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4	NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4
hg18_v1_chr7_+_123036312_123036347	0.00456712	SOX2.p2	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15	BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15	NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15
hg18_v1_chr19_+_9593136_9593217	0.00455989	SOX2.p2	CR598956|LOC284385|284385|hypothetical LOC284385	AK097685|LOC284385|284385|hypothetical LOC284385	BC143540|LOC284385|284385|hypothetical LOC284385
hg18_v1_chr1_+_78217510_78217611	0.00454804	SOX2.p2	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4
hg18_v1_chr2_+_9900933_9901121	0.00454776	SOX2.p2	CR622846|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	CR606132|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa
hg18_v1_chr12_+_51729239_51729277	0.00454444	SOX2.p2	AK172747|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)
hg18_v1_chr17_-_71287417_71287456	0.00453944	SOX2.p2	BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595774|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR611244|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602412|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR604778|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR606388|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595544|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603793|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR617433|H3F3B|3021|H3 histone, family 3B (H3.3B)	AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602780|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618082|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR619729|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621264|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625366|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR591387|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR603175|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR621009|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR618076|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR624690|H3F3B|3021|H3 histone, family 3B (H3.3B)	BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR595062|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR597711|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR602581|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR605171|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR610507|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR614120|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR615382|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR616111|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR608885|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR622957|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR599200|H3F3B|3021|H3 histone, family 3B (H3.3B)	CR625547|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)	AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)	BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)	NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)
hg18_v1_chr16_+_68016047_68016058	0.00453601	SOX2.p2	CR599824|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR616857|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr10_-_27483144_27483283	0.00452799	SOX2.p2	CR611030|YME1L1|10730|YME1-like 1 (S. cerevisiae)	BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)	AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)
hg18_v1_chr2_-_172458970_172459089	0.00452431	SOX2.p2	DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
hg18_v1_chr3_+_14964080_14964239	0.00450629	SOX2.p2	AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2
hg18_v1_chr20_-_44468660_44468753	0.00448762	SOX2.p2	AK299318|ELMO2|63916|engulfment and cell motility 2	AL833406|ELMO2|63916|engulfment and cell motility 2	BX648819|ELMO2|63916|engulfment and cell motility 2	NM_133171|ELMO2|63916|engulfment and cell motility 2	NM_182764|ELMO2|63916|engulfment and cell motility 2
hg18_v1_chr3_-_198960964_198960964	0.00446857	SOX2.p2	NM_001145642|KIAA0226|9711|KIAA0226
hg18_v1_chr6_-_42821815_42821892	0.00446259	SOX2.p2	NM_003192|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr14_+_49304533_49304641	0.00445739	SOX2.p2	NM_014315|KLHDC2|23588|kelch domain containing 2	CR594220|KLHDC2|23588|kelch domain containing 2	CR597789|KLHDC2|23588|kelch domain containing 2	CR622573|KLHDC2|23588|kelch domain containing 2	CR618882|KLHDC2|23588|kelch domain containing 2	AF244137|KLHDC2|23588|kelch domain containing 2	BC002335|KLHDC2|23588|kelch domain containing 2	BC024192|KLHDC2|23588|kelch domain containing 2	CR592955|KLHDC2|23588|kelch domain containing 2	CR617895|KLHDC2|23588|kelch domain containing 2	AK001771|KLHDC2|23588|kelch domain containing 2	CR609630|KLHDC2|23588|kelch domain containing 2	CR594509|KLHDC2|23588|kelch domain containing 2	CR614613|KLHDC2|23588|kelch domain containing 2	CR591808|KLHDC2|23588|kelch domain containing 2	CR592763|KLHDC2|23588|kelch domain containing 2	CR625292|KLHDC2|23588|kelch domain containing 2	BX161429|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr3_-_167037946_167037977	0.00445615	SOX2.p2	NM_000055|BCHE|590|butyrylcholinesterase
hg18_v1_chr9_+_95886558_95886614	0.00444788	SOX2.p2	BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1
hg18_v1_chr7_-_104949787_104950008	0.0044469	SOX2.p2	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)
hg18_v1_chr21_-_30893063_30893091	0.00443807	SOX2.p2	NM_181604|KRTAP6-2|337967|keratin associated protein 6-2	AB096952|KRTAP6-2|337967|keratin associated protein 6-2
hg18_v1_chr13_-_35818777_35818939	0.00443275	SOX2.p2	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr10_+_104211134_104211147	0.00441502	SOX2.p2	AK296583|TMEM180|79847|transmembrane protein 180
hg18_v1_chr5_-_96504194_96504202	0.004397	SOX2.p2	BC036467|LIX1|167410|Lix1 homolog (chicken)
hg18_v1_chr11_-_122357545_122357588	0.00437811	SOX2.p2	AB231738|BSX|390259|brain-specific homeobox	NM_001098169|BSX|390259|brain-specific homeobox
hg18_v1_chr12_-_101398288_101398403	0.0043759	SOX2.p2	BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)
hg18_v1_chr3_-_10042989_10043077	0.00437479	SOX2.p2	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene	BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene
hg18_v1_chr1_+_246125480_246125511	0.0043631	SOX2.p2	BC146848|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831764|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	EU831842|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3	NM_001001957|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3
hg18_v1_chr7_+_2565238_2565308	0.00436272	SOX2.p2	AK092404|IQCE|23288|IQ motif containing E	BC061518|IQCE|23288|IQ motif containing E	AL136792|IQCE|23288|IQ motif containing E	AK293372|IQCE|23288|IQ motif containing E
hg18_v1_chr3_-_63824496_63824528	0.0043439	SOX2.p2	CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)	BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)	AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)
hg18_v1_chr19_+_63482118_63482258	0.00433361	SOX2.p2	AK093110|ZNF8|7554|zinc finger protein 8	NM_021089|ZNF8|7554|zinc finger protein 8	AK225825|ZNF8|7554|zinc finger protein 8	AK299716|ZNF8|7554|zinc finger protein 8	BC039323|ZNF8|7554|zinc finger protein 8	EU446717|ZNF8|7554|zinc finger protein 8
hg18_v1_chr16_-_29845040_29845071	0.00433304	SOX2.p2	BC036228|KCTD13|253980|potassium channel tetramerisation domain containing 13	NM_178863|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr7_-_120285364_120285428	0.00431103	SOX2.p2	BC031265|TSPAN12|23554|tetraspanin 12	NM_012338|TSPAN12|23554|tetraspanin 12
hg18_v1_chr14_-_66896167_66896472	0.00430955	SOX2.p2	CR598234|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR614271|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR591270|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR590079|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR619369|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR621010|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR600453|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR613083|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR626788|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	CR603153|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg18_v1_chr15_-_40628284_40628309	0.00430886	SOX2.p2	AK094891|LRRC57|255252|leucine rich repeat containing 57	NM_153260|LRRC57|255252|leucine rich repeat containing 57
hg18_v1_chr8_-_74822206_74822294	0.00428624	SOX2.p2	AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)
hg18_v1_chr5_+_145297490_145297632	0.0042849	SOX2.p2	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2
hg18_v1_chrX_-_154495686_154495815	0.00426818	SOX2.p2	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon	BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610079|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR610946|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon	CR595358|TMLHE|55217|trimethyllysine hydroxylase, epsilon	AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon	NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon
hg18_v1_chr22_+_25155220_25155428	0.00426794	SOX2.p2	CR603469|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2	AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2
hg18_v1_chr11_-_61340804_61340951	0.00426591	SOX2.p2	AF199596|FADS1|3992|fatty acid desaturase 1	AF226273|FADS1|3992|fatty acid desaturase 1	DQ890643|FADS1|3992|fatty acid desaturase 1	DQ893822|FADS1|3992|fatty acid desaturase 1	AK027427|FADS1|3992|fatty acid desaturase 1	BC007846|FADS1|3992|fatty acid desaturase 1	AK222906|FADS1|3992|fatty acid desaturase 1	CR611884|FADS1|3992|fatty acid desaturase 1	AF084558|FADS1|3992|fatty acid desaturase 1	AL512760|FADS1|3992|fatty acid desaturase 1	AK314199|FADS1|3992|fatty acid desaturase 1	CR597486|FADS1|3992|fatty acid desaturase 1	AK027522|FADS1|3992|fatty acid desaturase 1
hg18_v1_chr8_+_30072463_30072507	0.0042422	SOX2.p2	NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	CR605624|LEPROTL1|23484|leptin receptor overlapping transcript-like 1
hg18_v1_chr17_+_58981708_58981781	0.00422391	SOX2.p2	CR606772|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7	DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7
hg18_v1_chr15_+_94676691_94676797	0.0042147	SOX2.p2	CR601286|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2
hg18_v1_chr16_+_65196031_65196119	0.00420551	SOX2.p2	BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	CR611794|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr17_-_77094426_77094495	0.00419431	SOX2.p2	CR595732|ACTG1|71|actin, gamma 1
hg18_v1_chr9_-_94095734_94095785	0.00418746	SOX2.p2	AB209234|IARS|3376|isoleucyl-tRNA synthetase	D28473|IARS|3376|isoleucyl-tRNA synthetase	AK293014|IARS|3376|isoleucyl-tRNA synthetase
hg18_v1_chr12_-_47790604_47790780	0.00418309	SOX2.p2	DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like	DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like	BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like	AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like	AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	CR625783|LMBR1L|55716|limb region 1 homolog (mouse)-like
hg18_v1_chr16_+_68353662_68353716	0.00417679	SOX2.p2	AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2
hg18_v1_chr4_+_189153918_189153937	0.00416667	SOX2.p2	AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)	AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)	NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)	CR624529|ZFP42|132625|zinc finger protein 42 homolog (mouse)
hg18_v1_chr17_-_60988226_60988234	0.00416453	SOX2.p2	CR933657|AXIN2|8313|axin 2
hg18_v1_chr3_+_9748494_9748603	0.00414709	SOX2.p2	AL713696|BRPF1|7862|bromodomain and PHD finger containing, 1
hg18_v1_chr2_-_233123450_233123509	0.00412349	SOX2.p2	AK056329|TIGD1|200765|tigger transposable element derived 1	NM_145702|TIGD1|200765|tigger transposable element derived 1	BC063500|TIGD1|200765|tigger transposable element derived 1
hg18_v1_chr13_-_35818603_35818645	0.00412154	SOX2.p2	BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)
hg18_v1_chr19_+_62787319_62787439	0.00408172	SOX2.p2	AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)
hg18_v1_chr10_-_14686413_14686457	0.00407083	SOX2.p2	BC072452|FAM107B|83641|family with sequence similarity 107, member B
hg18_v1_chr6_+_83130673_83130719	0.00405352	SOX2.p2	AK074790|TPBG|7162|trophoblast glycoprotein	NM_001166392|TPBG|7162|trophoblast glycoprotein
hg18_v1_chr22_+_37407906_37407920	0.00404931	SOX2.p2	AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr14_+_19993181_19993195	0.00402814	SOX2.p2	AK098588|APEX1|328|APEX nuclease (multifunctional DNA repair enzyme) 1
hg18_v1_chr11_-_55438633_55438633	0.00402243	SOX2.p2	NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2
hg18_v1_chr16_+_31098931_31098958	0.00398017	SOX2.p2	NM_001170634|FUS|2521|fused in sarcoma	NM_001170937|FUS|2521|fused in sarcoma	NM_004960|FUS|2521|fused in sarcoma	CR591758|FUS|2521|fused in sarcoma
hg18_v1_chr17_-_77094375_77094425	0.00397213	SOX2.p2	BC001920|ACTG1|71|actin, gamma 1	BC015779|ACTG1|71|actin, gamma 1	CR595991|ACTG1|71|actin, gamma 1	CR620790|ACTG1|71|actin, gamma 1	CR610111|ACTG1|71|actin, gamma 1	CR612408|ACTG1|71|actin, gamma 1	CR623642|ACTG1|71|actin, gamma 1	CR590591|ACTG1|71|actin, gamma 1	CR594098|ACTG1|71|actin, gamma 1	CR598828|ACTG1|71|actin, gamma 1	CR610162|ACTG1|71|actin, gamma 1	CR610710|ACTG1|71|actin, gamma 1	CR612488|ACTG1|71|actin, gamma 1	CR612527|ACTG1|71|actin, gamma 1	CR613019|ACTG1|71|actin, gamma 1	CR615078|ACTG1|71|actin, gamma 1	CR615292|ACTG1|71|actin, gamma 1	CR615976|ACTG1|71|actin, gamma 1	CR617657|ACTG1|71|actin, gamma 1	CR618764|ACTG1|71|actin, gamma 1	CR626452|ACTG1|71|actin, gamma 1	BC053572|ACTG1|71|actin, gamma 1	CR600687|ACTG1|71|actin, gamma 1	CR591798|ACTG1|71|actin, gamma 1	CR594425|ACTG1|71|actin, gamma 1	CR595246|ACTG1|71|actin, gamma 1	CR595791|ACTG1|71|actin, gamma 1	CR596062|ACTG1|71|actin, gamma 1	CR596102|ACTG1|71|actin, gamma 1	CR596522|ACTG1|71|actin, gamma 1	CR597843|ACTG1|71|actin, gamma 1	CR599592|ACTG1|71|actin, gamma 1	CR599978|ACTG1|71|actin, gamma 1	CR600128|ACTG1|71|actin, gamma 1	CR601583|ACTG1|71|actin, gamma 1	CR602480|ACTG1|71|actin, gamma 1	CR602599|ACTG1|71|actin, gamma 1	CR604033|ACTG1|71|actin, gamma 1	CR606124|ACTG1|71|actin, gamma 1	CR606241|ACTG1|71|actin, gamma 1	CR606346|ACTG1|71|actin, gamma 1	CR609318|ACTG1|71|actin, gamma 1	CR610496|ACTG1|71|actin, gamma 1	CR610665|ACTG1|71|actin, gamma 1	CR611108|ACTG1|71|actin, gamma 1	CR611432|ACTG1|71|actin, gamma 1	CR611536|ACTG1|71|actin, gamma 1	CR612114|ACTG1|71|actin, gamma 1	CR612705|ACTG1|71|actin, gamma 1	CR614439|ACTG1|71|actin, gamma 1	CR614891|ACTG1|71|actin, gamma 1	CR615028|ACTG1|71|actin, gamma 1	CR616983|ACTG1|71|actin, gamma 1	CR617404|ACTG1|71|actin, gamma 1	CR617643|ACTG1|71|actin, gamma 1	CR617915|ACTG1|71|actin, gamma 1	CR619691|ACTG1|71|actin, gamma 1	CR619966|ACTG1|71|actin, gamma 1	CR620836|ACTG1|71|actin, gamma 1	BC015005|ACTG1|71|actin, gamma 1	CR591159|ACTG1|71|actin, gamma 1	CR595688|ACTG1|71|actin, gamma 1	CR596065|ACTG1|71|actin, gamma 1	CR598534|ACTG1|71|actin, gamma 1	CR609723|ACTG1|71|actin, gamma 1	CR612862|ACTG1|71|actin, gamma 1	CR616609|ACTG1|71|actin, gamma 1	CR616966|ACTG1|71|actin, gamma 1	CR617867|ACTG1|71|actin, gamma 1	CR619914|ACTG1|71|actin, gamma 1	CR620218|ACTG1|71|actin, gamma 1	BC009848|ACTG1|71|actin, gamma 1	CR597515|ACTG1|71|actin, gamma 1	CR592121|ACTG1|71|actin, gamma 1	CR592736|ACTG1|71|actin, gamma 1	CR593892|ACTG1|71|actin, gamma 1	CR601927|ACTG1|71|actin, gamma 1	CR602348|ACTG1|71|actin, gamma 1	CR610810|ACTG1|71|actin, gamma 1	CR625364|ACTG1|71|actin, gamma 1	CR626577|ACTG1|71|actin, gamma 1	BC010999|ACTG1|71|actin, gamma 1	CR597492|ACTG1|71|actin, gamma 1	CR597615|ACTG1|71|actin, gamma 1	CR597885|ACTG1|71|actin, gamma 1	CR599672|ACTG1|71|actin, gamma 1	CR612443|ACTG1|71|actin, gamma 1	CR617232|ACTG1|71|actin, gamma 1	CR620630|ACTG1|71|actin, gamma 1	BC007442|ACTG1|71|actin, gamma 1	BC012050|ACTG1|71|actin, gamma 1	BC018774|ACTG1|71|actin, gamma 1	CR590228|ACTG1|71|actin, gamma 1	CR590320|ACTG1|71|actin, gamma 1	CR590603|ACTG1|71|actin, gamma 1	CR591211|ACTG1|71|actin, gamma 1	CR592707|ACTG1|71|actin, gamma 1	CR594922|ACTG1|71|actin, gamma 1	CR595093|ACTG1|71|actin, gamma 1	CR595449|ACTG1|71|actin, gamma 1	CR597397|ACTG1|71|actin, gamma 1	CR597456|ACTG1|71|actin, gamma 1	CR598076|ACTG1|71|actin, gamma 1	CR598244|ACTG1|71|actin, gamma 1	CR598734|ACTG1|71|actin, gamma 1	CR599814|ACTG1|71|actin, gamma 1	CR599830|ACTG1|71|actin, gamma 1	CR599892|ACTG1|71|actin, gamma 1	CR605191|ACTG1|71|actin, gamma 1	CR608951|ACTG1|71|actin, gamma 1	CR609271|ACTG1|71|actin, gamma 1	CR609909|ACTG1|71|actin, gamma 1	CR610691|ACTG1|71|actin, gamma 1	CR611607|ACTG1|71|actin, gamma 1	CR612364|ACTG1|71|actin, gamma 1	CR614730|ACTG1|71|actin, gamma 1	CR616006|ACTG1|71|actin, gamma 1	CR616940|ACTG1|71|actin, gamma 1	CR616969|ACTG1|71|actin, gamma 1	CR618617|ACTG1|71|actin, gamma 1	CR619367|ACTG1|71|actin, gamma 1	CR619574|ACTG1|71|actin, gamma 1	CR620806|ACTG1|71|actin, gamma 1	CR621813|ACTG1|71|actin, gamma 1	CR621873|ACTG1|71|actin, gamma 1	CR622814|ACTG1|71|actin, gamma 1	CR623020|ACTG1|71|actin, gamma 1	CR623123|ACTG1|71|actin, gamma 1	CR625920|ACTG1|71|actin, gamma 1	BC015695|ACTG1|71|actin, gamma 1	CR590980|ACTG1|71|actin, gamma 1	CR591079|ACTG1|71|actin, gamma 1	CR591509|ACTG1|71|actin, gamma 1	CR591533|ACTG1|71|actin, gamma 1	CR594416|ACTG1|71|actin, gamma 1	CR596618|ACTG1|71|actin, gamma 1	CR598395|ACTG1|71|actin, gamma 1	CR600669|ACTG1|71|actin, gamma 1	CR600832|ACTG1|71|actin, gamma 1	CR602399|ACTG1|71|actin, gamma 1	CR609414|ACTG1|71|actin, gamma 1	CR615214|ACTG1|71|actin, gamma 1	CR615511|ACTG1|71|actin, gamma 1	CR621190|ACTG1|71|actin, gamma 1	CR603777|ACTG1|71|actin, gamma 1	CR604825|ACTG1|71|actin, gamma 1	CR606117|ACTG1|71|actin, gamma 1	CR621390|ACTG1|71|actin, gamma 1	CR592239|ACTG1|71|actin, gamma 1	CR592652|ACTG1|71|actin, gamma 1	CR592730|ACTG1|71|actin, gamma 1	CR594198|ACTG1|71|actin, gamma 1	CR596575|ACTG1|71|actin, gamma 1	CR598831|ACTG1|71|actin, gamma 1	CR598898|ACTG1|71|actin, gamma 1	CR602227|ACTG1|71|actin, gamma 1	CR603085|ACTG1|71|actin, gamma 1	CR603639|ACTG1|71|actin, gamma 1	CR603981|ACTG1|71|actin, gamma 1	CR604519|ACTG1|71|actin, gamma 1	CR605598|ACTG1|71|actin, gamma 1	CR606439|ACTG1|71|actin, gamma 1	CR609401|ACTG1|71|actin, gamma 1	CR611433|ACTG1|71|actin, gamma 1	CR615212|ACTG1|71|actin, gamma 1	CR618978|ACTG1|71|actin, gamma 1	CR620121|ACTG1|71|actin, gamma 1	CR621747|ACTG1|71|actin, gamma 1	CR623145|ACTG1|71|actin, gamma 1	CR624265|ACTG1|71|actin, gamma 1	CR625300|ACTG1|71|actin, gamma 1	CR590376|ACTG1|71|actin, gamma 1	CR594480|ACTG1|71|actin, gamma 1	CR594511|ACTG1|71|actin, gamma 1	CR595096|ACTG1|71|actin, gamma 1	CR597169|ACTG1|71|actin, gamma 1	CR599678|ACTG1|71|actin, gamma 1	CR600758|ACTG1|71|actin, gamma 1	CR602472|ACTG1|71|actin, gamma 1	CR604384|ACTG1|71|actin, gamma 1	CR604531|ACTG1|71|actin, gamma 1	CR605767|ACTG1|71|actin, gamma 1	CR607909|ACTG1|71|actin, gamma 1	CR611625|ACTG1|71|actin, gamma 1	CR615291|ACTG1|71|actin, gamma 1	CR619007|ACTG1|71|actin, gamma 1	CR622024|ACTG1|71|actin, gamma 1	CR622438|ACTG1|71|actin, gamma 1	CR624836|ACTG1|71|actin, gamma 1	BC000292|ACTG1|71|actin, gamma 1	CR613104|ACTG1|71|actin, gamma 1	AK304637|ACTG1|71|actin, gamma 1	AK291937|ACTG1|71|actin, gamma 1	AK301175|ACTG1|71|actin, gamma 1	X04098|ACTG1|71|actin, gamma 1	NM_001614|ACTG1|71|actin, gamma 1	CR622164|ACTG1|71|actin, gamma 1
hg18_v1_chr7_-_143523582_143523723	0.00396521	SOX2.p2	BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35
hg18_v1_chr11_+_60885983_60886316	0.00396193	SOX2.p2	NM_016464|TMEM138|51524|transmembrane protein 138	CR596588|TMEM138|51524|transmembrane protein 138
hg18_v1_chr3_+_198960820_198960820	0.0039475	SOX2.p2	AK303462|FYTTD1|84248|forty-two-three domain containing 1	NM_001011537|FYTTD1|84248|forty-two-three domain containing 1
hg18_v1_chr3_-_186454509_186454579	0.00394164	SOX2.p2	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
hg18_v1_chr17_+_13913443_13913565	0.00393874	SOX2.p2	NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)
hg18_v1_chr4_-_157006827_157006874	0.00393567	SOX2.p2	AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal	NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal
hg18_v1_chr1_-_52116598_52116646	0.00392254	SOX2.p2	AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)
hg18_v1_chr6_-_79844503_79844573	0.0039121	SOX2.p2	DQ924532|PHIP|55023|pleckstrin homology domain interacting protein	AJ303102|PHIP|55023|pleckstrin homology domain interacting protein
hg18_v1_chrX_+_70669636_70669665	0.0038899	SOX2.p2	NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
hg18_v1_chr2_-_3583801_3583833	0.00388772	SOX2.p2	AF039652|RNASEH1|246243|ribonuclease H1	CR596638|RNASEH1|246243|ribonuclease H1	NM_002936|RNASEH1|246243|ribonuclease H1	CR594242|RNASEH1|246243|ribonuclease H1
hg18_v1_chr8_-_95343716_95343740	0.00388429	SOX2.p2	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle	BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle	NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle	CR603445|GEM|2669|GTP binding protein overexpressed in skeletal muscle
hg18_v1_chr2_-_224410544_224410564	0.0038626	SOX2.p2	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit	NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit
hg18_v1_chr1_-_148155986_148156070	0.00385696	SOX2.p2	AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A	BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A	AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A	AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A	BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A	BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A	NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A
hg18_v1_chr1_+_224477941_224478005	0.00379169	SOX2.p2	BC111974|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC113441|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	BC143784|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	AF211891|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)	NM_031944|MIXL1|83881|Mix1 homeobox-like 1 (Xenopus laevis)
hg18_v1_chr11_-_56101772_56101838	0.0037913	SOX2.p2	NM_001004741|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10	BC140733|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10
hg18_v1_chr5_-_142764168_142764282	0.0037851	SOX2.p2	AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg18_v1_chr10_-_25052549_25052675	0.00377752	SOX2.p2	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21	NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21
hg18_v1_chr6_-_76010169_76010229	0.0037541	SOX2.p2	CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	CR610116|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr6_-_89730066_89730066	0.00374071	SOX2.p2	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase
hg18_v1_chr17_-_59172852_59172895	0.00369293	SOX2.p2	BC043641|STRADA|92335|STE20-related kinase adaptor alpha	CR601658|STRADA|92335|STE20-related kinase adaptor alpha	AL832407|STRADA|92335|STE20-related kinase adaptor alpha	AK301331|STRADA|92335|STE20-related kinase adaptor alpha	AK075005|STRADA|92335|STE20-related kinase adaptor alpha
hg18_v1_chr10_-_61336190_61336224	0.00368978	SOX2.p2	S72869|CCDC6|8030|coiled-coil domain containing 6
hg18_v1_chr16_+_68015990_68016044	0.00366369	SOX2.p2	AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR610358|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR605284|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR621814|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR622662|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR625442|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	CR623816|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr4_-_77147625_77147685	0.00366324	SOX2.p2	BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9	NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9	X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9	AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9	BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9
hg18_v1_chr19_+_18655391_18655458	0.00364807	SOX2.p2	AK024089|CRTC1|23373|CREB regulated transcription coactivator 1	AY040323|CRTC1|23373|CREB regulated transcription coactivator 1	NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1	NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1
hg18_v1_chr22_+_37407921_37407924	0.00364362	SOX2.p2	BC009363|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR456475|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR594101|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR611731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr10_+_18469611_18469815	0.0036356	SOX2.p2	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit
hg18_v1_chr7_-_20792948_20792959	0.00363048	SOX2.p2	AK299947|SP8|221833|Sp8 transcription factor
hg18_v1_chr4_-_46690197_46690336	0.00361619	SOX2.p2	DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg18_v1_chr2_-_162639297_162639308	0.00360572	SOX2.p2	BC065265|DPP4|1803|dipeptidyl-peptidase 4	NM_001935|DPP4|1803|dipeptidyl-peptidase 4
hg18_v1_chr11_-_75057299_75057346	0.00354382	SOX2.p2	AK123340|MAP6|4135|microtubule-associated protein 6
hg18_v1_chr8_+_23442413_23442524	0.00352519	SOX2.p2	AK074708|SLC25A37|51312|solute carrier family 25, member 37	AK223194|SLC25A37|51312|solute carrier family 25, member 37	AF223466|SLC25A37|51312|solute carrier family 25, member 37	AY032628|SLC25A37|51312|solute carrier family 25, member 37	CR592142|SLC25A37|51312|solute carrier family 25, member 37	BC015013|SLC25A37|51312|solute carrier family 25, member 37	AK075313|SLC25A37|51312|solute carrier family 25, member 37	AL833186|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr19_+_49268106_49268194	0.00351694	SOX2.p2	AY458845|ZNF284|342909|zinc finger protein 284	NM_001037813|ZNF284|342909|zinc finger protein 284	CR936662|ZNF284|342909|zinc finger protein 284
hg18_v1_chr10_-_115923874_115923971	0.00350073	SOX2.p2	BC100670|C10orf118|55088|chromosome 10 open reading frame 118	BC103499|C10orf118|55088|chromosome 10 open reading frame 118	BC103504|C10orf118|55088|chromosome 10 open reading frame 118	BC105632|C10orf118|55088|chromosome 10 open reading frame 118	BC152306|C10orf118|55088|chromosome 10 open reading frame 118	BC107430|C10orf118|55088|chromosome 10 open reading frame 118	BC070368|C10orf118|55088|chromosome 10 open reading frame 118	BX537964|C10orf118|55088|chromosome 10 open reading frame 118	AK307517|C10orf118|55088|chromosome 10 open reading frame 118	AK092620|C10orf118|55088|chromosome 10 open reading frame 118	BC020842|C10orf118|55088|chromosome 10 open reading frame 118	BC030557|C10orf118|55088|chromosome 10 open reading frame 118
hg18_v1_chr12_+_70343943_70344203	0.00350067	SOX2.p2	NM_031435|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AL136607|THAP2|83591|THAP domain containing, apoptosis associated protein 2	BC008358|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg18_v1_chr9_-_131637361_131637380	0.00350026	SOX2.p2	AK057004|C9orf78|51759|chromosome 9 open reading frame 78	CR608293|C9orf78|51759|chromosome 9 open reading frame 78	AF151054|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr4_+_53938567_53938578	0.00349399	SOX2.p2	NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)
hg18_v1_chr1_-_174442987_174442997	0.00347314	SOX2.p2	BC094728|RFWD2|64326|ring finger and WD repeat domain 2	NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2	NM_022457|RFWD2|64326|ring finger and WD repeat domain 2
hg18_v1_chr4_-_39205316_39205489	0.00346863	SOX2.p2	AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase	AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase	BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase	AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase	AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase
hg18_v1_chr4_+_185064799_185064830	0.0034679	SOX2.p2	AK289840|STOX2|56977|storkhead box 2
hg18_v1_chr4_+_47403107_47403116	0.00345979	SOX2.p2	
hg18_v1_chr2_-_102719732_102719799	0.00343699	SOX2.p2	AK290589|MFSD9|84804|major facilitator superfamily domain containing 9	CR599593|MFSD9|84804|major facilitator superfamily domain containing 9	AK075376|MFSD9|84804|major facilitator superfamily domain containing 9	BC006242|MFSD9|84804|major facilitator superfamily domain containing 9	AK307178|MFSD9|84804|major facilitator superfamily domain containing 9	NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9	AK296768|MFSD9|84804|major facilitator superfamily domain containing 9
hg18_v1_chr7_+_142670624_142670710	0.00342947	SOX2.p2	NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1	NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1	NM_015917|GSTK1|373156|glutathione S-transferase kappa 1	AK295592|GSTK1|373156|glutathione S-transferase kappa 1	AL136938|GSTK1|373156|glutathione S-transferase kappa 1	AF087849|GSTK1|373156|glutathione S-transferase kappa 1	CR614943|GSTK1|373156|glutathione S-transferase kappa 1	AY520571|GSTK1|373156|glutathione S-transferase kappa 1	CR600089|GSTK1|373156|glutathione S-transferase kappa 1	AF070657|GSTK1|373156|glutathione S-transferase kappa 1	AK000640|GSTK1|373156|glutathione S-transferase kappa 1	BC001231|GSTK1|373156|glutathione S-transferase kappa 1	AK095263|GSTK1|373156|glutathione S-transferase kappa 1	AK289580|GSTK1|373156|glutathione S-transferase kappa 1	CR615801|GSTK1|373156|glutathione S-transferase kappa 1	AK289570|GSTK1|373156|glutathione S-transferase kappa 1
hg18_v1_chr12_+_27755028_27755055	0.00342264	SOX2.p2	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35	AK075378|MRPS35|60488|mitochondrial ribosomal protein S35	AK075515|MRPS35|60488|mitochondrial ribosomal protein S35	BC109372|MRPS35|60488|mitochondrial ribosomal protein S35	CR612857|MRPS35|60488|mitochondrial ribosomal protein S35	BC063515|MRPS35|60488|mitochondrial ribosomal protein S35	CR595120|MRPS35|60488|mitochondrial ribosomal protein S35	CR624689|MRPS35|60488|mitochondrial ribosomal protein S35	BC028346|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr12_-_55040183_55040303	0.00336948	SOX2.p2	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa
hg18_v1_chr9_+_35819375_35819581	0.00336632	SOX2.p2	BC064951|TMEM8B|51754|transmembrane protein 8B	NM_001042590|TMEM8B|51754|transmembrane protein 8B	BC082765|TMEM8B|51754|transmembrane protein 8B
hg18_v1_chr12_-_51281482_51281588	0.00335893	SOX2.p2	AK302016|KRT72|140807|keratin 72	AK093060|KRT72|140807|keratin 72	BC113686|KRT72|140807|keratin 72	AY033495|KRT72|140807|keratin 72	AK293645|KRT72|140807|keratin 72	NM_001146225|KRT72|140807|keratin 72	NM_001146226|KRT72|140807|keratin 72	NM_080747|KRT72|140807|keratin 72
hg18_v1_chr1_+_117404467_117404487	0.00333519	SOX2.p2	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II	NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II	AF080255|TTF2|8458|transcription termination factor, RNA polymerase II	BC015341|TTF2|8458|transcription termination factor, RNA polymerase II	BC030058|TTF2|8458|transcription termination factor, RNA polymerase II
hg18_v1_chr1_-_78217360_78217366	0.00331859	SOX2.p2	NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr16_+_68016063_68016067	0.00330228	SOX2.p2	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)	AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)
hg18_v1_chr1_-_58488761_58488780	0.0032911	SOX2.p2	CR933698|DAB1|1600|disabled homolog 1 (Drosophila)	AB210012|DAB1|1600|disabled homolog 1 (Drosophila)
hg18_v1_chr3_+_161040343_161040432	0.00328828	SOX2.p2	NM_001197109|SCHIP1|29970|schwannomin interacting protein 1	AK091871|SCHIP1|29970|schwannomin interacting protein 1
hg18_v1_chr15_+_67532176_67532341	0.00328716	SOX2.p2	CR595749|RPLP1|6176|ribosomal protein, large, P1	CR597881|RPLP1|6176|ribosomal protein, large, P1	CR614011|RPLP1|6176|ribosomal protein, large, P1	CR615773|RPLP1|6176|ribosomal protein, large, P1	NM_001003|RPLP1|6176|ribosomal protein, large, P1	NM_213725|RPLP1|6176|ribosomal protein, large, P1	AK130958|RPLP1|6176|ribosomal protein, large, P1	AK026579|RPLP1|6176|ribosomal protein, large, P1	D28366|RPLP1|6176|ribosomal protein, large, P1	M17886|RPLP1|6176|ribosomal protein, large, P1	AY303789|RPLP1|6176|ribosomal protein, large, P1	CR616118|RPLP1|6176|ribosomal protein, large, P1	CR611187|RPLP1|6176|ribosomal protein, large, P1	BC003369|RPLP1|6176|ribosomal protein, large, P1	CR598265|RPLP1|6176|ribosomal protein, large, P1	CR623515|RPLP1|6176|ribosomal protein, large, P1	CR602613|RPLP1|6176|ribosomal protein, large, P1	BC007590|RPLP1|6176|ribosomal protein, large, P1	CR603914|RPLP1|6176|ribosomal protein, large, P1	CR622341|RPLP1|6176|ribosomal protein, large, P1	CR597116|RPLP1|6176|ribosomal protein, large, P1	CR450339|RPLP1|6176|ribosomal protein, large, P1	CR542209|RPLP1|6176|ribosomal protein, large, P1
hg18_v1_chr5_-_177986678_177986694	0.00327842	SOX2.p2	AK308879|CLK4|57396|CDC-like kinase 4	BC151233|CLK4|57396|CDC-like kinase 4
hg18_v1_chr1_-_210654696_210654857	0.00326256	SOX2.p2	AK295224|TMEM206|55248|transmembrane protein 206	CR457268|TMEM206|55248|transmembrane protein 206	BC006320|TMEM206|55248|transmembrane protein 206
hg18_v1_chr22_+_37407925_37407941	0.00325413	SOX2.p2	AK312076|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CU013025|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CU013313|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	DQ893045|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	DQ896289|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR616741|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR599084|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	CR617759|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr3_+_39423183_39423245	0.00325074	SOX2.p2	BC070263|RPSA|3921|ribosomal protein SA	NM_002295|RPSA|3921|ribosomal protein SA	BC066941|RPSA|3921|ribosomal protein SA	BC107567|RPSA|3921|ribosomal protein SA	BC005391|RPSA|3921|ribosomal protein SA	BC062714|RPSA|3921|ribosomal protein SA	CR595716|RPSA|3921|ribosomal protein SA	AF503367|RPSA|3921|ribosomal protein SA	CR625327|RPSA|3921|ribosomal protein SA	BC013827|RPSA|3921|ribosomal protein SA	CR624384|RPSA|3921|ribosomal protein SA	BC050688|RPSA|3921|ribosomal protein SA	CR594860|RPSA|3921|ribosomal protein SA	CR608513|RPSA|3921|ribosomal protein SA	CR611940|RPSA|3921|ribosomal protein SA	CR612802|RPSA|3921|ribosomal protein SA	CR593226|RPSA|3921|ribosomal protein SA	CR593481|RPSA|3921|ribosomal protein SA	CR601130|RPSA|3921|ribosomal protein SA	CR608117|RPSA|3921|ribosomal protein SA	CR609304|RPSA|3921|ribosomal protein SA	CR611471|RPSA|3921|ribosomal protein SA	CR614112|RPSA|3921|ribosomal protein SA	CR614218|RPSA|3921|ribosomal protein SA	CR614827|RPSA|3921|ribosomal protein SA	CR616655|RPSA|3921|ribosomal protein SA	CR618995|RPSA|3921|ribosomal protein SA	CR623213|RPSA|3921|ribosomal protein SA	CR623621|RPSA|3921|ribosomal protein SA	X15005|RPSA|3921|ribosomal protein SA	BC034537|RPSA|3921|ribosomal protein SA	BC053370|RPSA|3921|ribosomal protein SA	BC071968|RPSA|3921|ribosomal protein SA	BC010418|RPSA|3921|ribosomal protein SA	CR590550|RPSA|3921|ribosomal protein SA	CR609795|RPSA|3921|ribosomal protein SA	CR614557|RPSA|3921|ribosomal protein SA	CR625028|RPSA|3921|ribosomal protein SA	CR626563|RPSA|3921|ribosomal protein SA	CR599598|RPSA|3921|ribosomal protein SA	BC071693|RPSA|3921|ribosomal protein SA	CR600444|RPSA|3921|ribosomal protein SA	BC018867|RPSA|3921|ribosomal protein SA	BC071969|RPSA|3921|ribosomal protein SA	BC073863|RPSA|3921|ribosomal protein SA	CR626298|RPSA|3921|ribosomal protein SA
hg18_v1_chr11_-_114880275_114880506	0.00323584	SOX2.p2	AB094146|CADM1|23705|cell adhesion molecule 1	CR457157|CADM1|23705|cell adhesion molecule 1	AF132811|CADM1|23705|cell adhesion molecule 1	BC125102|CADM1|23705|cell adhesion molecule 1	BC125103|CADM1|23705|cell adhesion molecule 1	AY358334|CADM1|23705|cell adhesion molecule 1	AK075502|CADM1|23705|cell adhesion molecule 1	BC035930|CADM1|23705|cell adhesion molecule 1	AK315245|CADM1|23705|cell adhesion molecule 1	BC047021|CADM1|23705|cell adhesion molecule 1	NM_001098517|CADM1|23705|cell adhesion molecule 1	NM_014333|CADM1|23705|cell adhesion molecule 1
hg18_v1_chr19_-_13074513_13074539	0.00322611	SOX2.p2	M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1
hg18_v1_chr11_+_56187713_56187737	0.00321879	SOX2.p2	BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1	NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1
hg18_v1_chr20_-_32728749_32728749	0.00316438	SOX2.p2	AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U
hg18_v1_chr20_-_2592777_2592892	0.0031346	SOX2.p2	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615180|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR618774|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR611698|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR615874|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR616056|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	CR614771|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta
hg18_v1_chr3_-_158361175_158361242	0.00313275	SOX2.p2	NM_020307|CCNL1|57018|cyclin L1	AK122738|CCNL1|57018|cyclin L1
hg18_v1_chr6_+_87921980_87922037	0.00312904	SOX2.p2	NM_015021|ZNF292|23036|zinc finger protein 292	AK123473|ZNF292|23036|zinc finger protein 292	BX537746|ZNF292|23036|zinc finger protein 292
hg18_v1_chr22_-_20314366_20314434	0.00312462	SOX2.p2	BC133043|YDJC|150223|YdjC homolog (bacterial)	BC133047|YDJC|150223|YdjC homolog (bacterial)
hg18_v1_chrX_-_15782803_15782812	0.00311732	SOX2.p2	BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr16_+_24174374_24174376	0.00310814	SOX2.p2	BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3
hg18_v1_chr17_+_40141501_40141576	0.00306864	SOX2.p2	BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr20_+_29790564_29790832	0.00303623	SOX2.p2	NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)
hg18_v1_chr7_-_2561853_2561930	0.00303425	SOX2.p2	AK131083|BAAT1|221927|BRCA1-associated ATM activator 1	NM_152743|BAAT1|221927|BRCA1-associated ATM activator 1
hg18_v1_chr10_+_104211148_104211197	0.00302843	SOX2.p2	AK301612|TMEM180|79847|transmembrane protein 180	AY358808|TMEM180|79847|transmembrane protein 180	NM_024789|TMEM180|79847|transmembrane protein 180
hg18_v1_chr2_-_133144094_133144253	0.00301742	SOX2.p2	AY358628|LYPD1|116372|LY6/PLAUR domain containing 1	BC017318|LYPD1|116372|LY6/PLAUR domain containing 1	CR601943|LYPD1|116372|LY6/PLAUR domain containing 1	AK309849|LYPD1|116372|LY6/PLAUR domain containing 1	AK075487|LYPD1|116372|LY6/PLAUR domain containing 1	AK130005|LYPD1|116372|LY6/PLAUR domain containing 1	AK094501|LYPD1|116372|LY6/PLAUR domain containing 1	AK123029|LYPD1|116372|LY6/PLAUR domain containing 1
hg18_v1_chr1_+_151456683_151456683	0.00301566	SOX2.p2	NM_001195571|PRR9|574414|proline rich 9
hg18_v1_chr3_+_10043139_10043182	0.00300128	SOX2.p2	BC013582|FANCD2|2177|Fanconi anemia, complementation group D2	BC038666|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr2_+_112749617_112749648	0.00299283	SOX2.p2	NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6
hg18_v1_chr9_+_122877056_122877110	0.00295835	SOX2.p2	AK307387|CEP110|11064|centrosomal protein 110kDa	BC089415|CEP110|11064|centrosomal protein 110kDa
hg18_v1_chr10_-_128067052_128067056	0.00288941	SOX2.p2	BC060804|ADAM12|8038|ADAM metallopeptidase domain 12
hg18_v1_chr7_-_35701253_35701276	0.00286732	SOX2.p2	BC020264|HERPUD2|64224|HERPUD family member 2	AK055708|HERPUD2|64224|HERPUD family member 2
hg18_v1_chr6_-_42821800_42821813	0.00285796	SOX2.p2	BC020170|TBCC|6903|tubulin folding cofactor C	AK312681|TBCC|6903|tubulin folding cofactor C	CR594940|TBCC|6903|tubulin folding cofactor C	CR609978|TBCC|6903|tubulin folding cofactor C	U61234|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr12_+_27754972_27755027	0.00285571	SOX2.p2	NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35	NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35	AF182422|MRPS35|60488|mitochondrial ribosomal protein S35
hg18_v1_chr12_+_6925997_6926000	0.00285409	SOX2.p2	AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr16_-_15742883_15743013	0.0028431	SOX2.p2	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle
hg18_v1_chr6_+_36318922_36318957	0.00282701	SOX2.p2	AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1	BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1	NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1
hg18_v1_chr17_+_23722689_23722825	0.00280037	SOX2.p2	AK314609|SARM1|23098|sterile alpha and TIR motif containing 1
hg18_v1_chr2_-_106177166_106177187	0.00274674	SOX2.p2	CR592836|UXS1|80146|UDP-glucuronate decarboxylase 1	BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1	AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1	AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1	AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1	AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1
hg18_v1_chr11_+_118394637_118394692	0.00274368	SOX2.p2	AF161520|TRAPPC4|51399|trafficking protein particle complex 4	AK025623|TRAPPC4|51399|trafficking protein particle complex 4	AK290520|TRAPPC4|51399|trafficking protein particle complex 4	AK293914|TRAPPC4|51399|trafficking protein particle complex 4	AK293977|TRAPPC4|51399|trafficking protein particle complex 4	AK297422|TRAPPC4|51399|trafficking protein particle complex 4	BC010866|TRAPPC4|51399|trafficking protein particle complex 4
hg18_v1_chr17_+_72827968_72828003	0.00273382	SOX2.p2	BC021192|SEPT9|10801|septin 9	BT007215|SEPT9|10801|septin 9	DQ890623|SEPT9|10801|septin 9	DQ893792|SEPT9|10801|septin 9
hg18_v1_chr15_-_21483457_21483495	0.00271907	SOX2.p2	CR618136|NDN|4692|necdin homolog (mouse)	CR621492|NDN|4692|necdin homolog (mouse)	CR626299|NDN|4692|necdin homolog (mouse)
hg18_v1_chr1_-_210654862_210654889	0.00268696	SOX2.p2	AK297200|TMEM206|55248|transmembrane protein 206	NM_001198862|TMEM206|55248|transmembrane protein 206	AK024066|TMEM206|55248|transmembrane protein 206	NM_018252|TMEM206|55248|transmembrane protein 206
hg18_v1_chr15_-_35177664_35177794	0.00263444	SOX2.p2	EU831754|MEIS2|4212|Meis homeobox 2	EU831831|MEIS2|4212|Meis homeobox 2	AK294411|MEIS2|4212|Meis homeobox 2	AK311546|MEIS2|4212|Meis homeobox 2	AK056038|MEIS2|4212|Meis homeobox 2	NM_172315|MEIS2|4212|Meis homeobox 2
hg18_v1_chr3_+_58198455_58198686	0.00262197	SOX2.p2	AF225418|ABHD6|57406|abhydrolase domain containing 6	AK122983|ABHD6|57406|abhydrolase domain containing 6	BC001698|ABHD6|57406|abhydrolase domain containing 6	CR589982|ABHD6|57406|abhydrolase domain containing 6
hg18_v1_chr12_-_119391897_119391910	0.00261364	SOX2.p2	AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9
hg18_v1_chr6_-_76010231_76010363	0.00259755	SOX2.p2	NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
hg18_v1_chr6_-_42821790_42821799	0.0025952	SOX2.p2	CR591267|TBCC|6903|tubulin folding cofactor C
hg18_v1_chr6_-_138935359_138935443	0.00259476	SOX2.p2	NM_020464|NHSL1|57224|NHS-like 1
hg18_v1_chr15_-_81006240_81006342	0.00258862	SOX2.p2	BC009407|RPS17|6218|ribosomal protein S17	BC020453|RPS17|6218|ribosomal protein S17	BC019899|RPS17|6218|ribosomal protein S17	CR618357|RPS17|6218|ribosomal protein S17	BC071928|RPS17|6218|ribosomal protein S17	M13932|RPS17|6218|ribosomal protein S17	AK311951|RPS17|6218|ribosomal protein S17	BC070222|RPS17|6218|ribosomal protein S17	BC022370|RPS17|6218|ribosomal protein S17	NM_001021|RPS17|6218|ribosomal protein S17	BC062715|RPS17|6218|ribosomal protein S17
hg18_v1_chrX_-_74659572_74659590	0.00257051	SOX2.p2	
hg18_v1_chr12_+_70344257_70344556	0.00256499	SOX2.p2	AK313452|THAP2|83591|THAP domain containing, apoptosis associated protein 2	AM393083|THAP2|83591|THAP domain containing, apoptosis associated protein 2	CR533485|THAP2|83591|THAP domain containing, apoptosis associated protein 2
hg18_v1_chr16_-_78192111_78192122	0.00256463	SOX2.p2	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)
hg18_v1_chr5_-_137876416_137876489	0.00255421	SOX2.p2	X80916|ETF1|2107|eukaryotic translation termination factor 1
hg18_v1_chr17_-_60988077_60988206	0.00252874	SOX2.p2	AK315303|AXIN2|8313|axin 2	NM_004655|AXIN2|8313|axin 2
hg18_v1_chr2_-_85642155_85642177	0.00252443	SOX2.p2	NM_000821|GGCX|2677|gamma-glutamyl carboxylase	NM_001142269|GGCX|2677|gamma-glutamyl carboxylase
hg18_v1_chr2_-_206732348_206732447	0.00252135	SOX2.p2	X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg18_v1_chr6_-_108688817_108688856	0.00251496	SOX2.p2	BT007114|SNX3|8724|sorting nexin 3	CR456898|SNX3|8724|sorting nexin 3	EU831975|SNX3|8724|sorting nexin 3	EU832068|SNX3|8724|sorting nexin 3	AF062483|SNX3|8724|sorting nexin 3	AB047360|SNX3|8724|sorting nexin 3	AF034546|SNX3|8724|sorting nexin 3
hg18_v1_chr17_-_71580117_71580170	0.00249015	SOX2.p2	AL512708|SRP68|6730|signal recognition particle 68kDa	AF195951|SRP68|6730|signal recognition particle 68kDa
hg18_v1_chrX_+_122821217_122822029	0.00248602	SOX2.p2	AK313883|XIAP|331|X-linked inhibitor of apoptosis	AK309704|XIAP|331|X-linked inhibitor of apoptosis	NM_001167|XIAP|331|X-linked inhibitor of apoptosis	U32974|XIAP|331|X-linked inhibitor of apoptosis	BC032729|XIAP|331|X-linked inhibitor of apoptosis
hg18_v1_chr14_+_66896840_66896900	0.00244661	SOX2.p2	J02645|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg18_v1_chr17_+_20970828_20970909	0.00242824	SOX2.p2	AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B
hg18_v1_chr5_-_136862786_136862973	0.00241536	SOX2.p2	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg18_v1_chr15_-_89276657_89276824	0.00240571	SOX2.p2	CR625970|HDDC3|374659|HD domain containing 3	NM_198527|HDDC3|374659|HD domain containing 3	BC033794|HDDC3|374659|HD domain containing 3	AK057584|HDDC3|374659|HD domain containing 3
hg18_v1_chr13_+_109935250_109935280	0.00240425	SOX2.p2	AK025912|COL4A2|1284|collagen, type IV, alpha 2
hg18_v1_chr13_+_44592647_44592790	0.00240148	SOX2.p2	CR609785|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	CR598374|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr7_-_8268666_8268730	0.00239744	SOX2.p2	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa	L01100|ICA1|3382|islet cell autoantigen 1, 69kDa	BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa	BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr3_-_32587188_32587369	0.00234733	SOX2.p2	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR619992|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR595277|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	CR623843|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1	NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1
hg18_v1_chr12_-_54938385_54938447	0.00234441	SOX2.p2	NM_173595|ANKRD52|283373|ankyrin repeat domain 52	AB190990|ANKRD52|283373|ankyrin repeat domain 52	AK125379|ANKRD52|283373|ankyrin repeat domain 52
hg18_v1_chr19_-_14490160_14490226	0.00232831	SOX2.p2	CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	CR620425|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1
hg18_v1_chr3_+_99699137_99699214	0.00232362	SOX2.p2	BC136724|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	BC136725|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	NM_001004737|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2
hg18_v1_chr7_+_113842407_113842449	0.00230686	SOX2.p2	AK296957|FOXP2|93986|forkhead box P2
hg18_v1_chr1_+_234753361_234753361	0.00230185	SOX2.p2	AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8	AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8	NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8
hg18_v1_chr19_+_40223249_40223249	0.00228831	SOX2.p2	M18930|HPN|3249|hepsin	NM_002151|HPN|3249|hepsin	NM_182983|HPN|3249|hepsin	X07732|HPN|3249|hepsin
hg18_v1_chr11_+_117720268_117720321	0.00228045	SOX2.p2	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)
hg18_v1_chr17_-_37034288_37034407	0.00223568	SOX2.p2	DQ891101|KRT17|3872|keratin 17	DQ894283|KRT17|3872|keratin 17	CR621616|KRT17|3872|keratin 17	CR600963|KRT17|3872|keratin 17	CR615020|KRT17|3872|keratin 17	CR603789|KRT17|3872|keratin 17	BC072018|KRT17|3872|keratin 17	CR622158|KRT17|3872|keratin 17	CR598766|KRT17|3872|keratin 17	CR612161|KRT17|3872|keratin 17	BC072019|KRT17|3872|keratin 17	BC011901|KRT17|3872|keratin 17	X62571|KRT17|3872|keratin 17	CR608860|KRT17|3872|keratin 17	CR618671|KRT17|3872|keratin 17	CR621301|KRT17|3872|keratin 17	BC000159|KRT17|3872|keratin 17	BC056421|KRT17|3872|keratin 17	CR595280|KRT17|3872|keratin 17	CR599780|KRT17|3872|keratin 17	CR608685|KRT17|3872|keratin 17	CR598735|KRT17|3872|keratin 17	CR599390|KRT17|3872|keratin 17	AK304373|KRT17|3872|keratin 17	AK095342|KRT17|3872|keratin 17	NM_000422|KRT17|3872|keratin 17
hg18_v1_chr1_-_156800017_156800017	0.0022305	SOX2.p2	NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1
hg18_v1_chr7_-_122985060_122985193	0.00222912	SOX2.p2	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	CR606314|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa
hg18_v1_chr1_-_241485298_241485330	0.0022288	SOX2.p2	NM_001042404|CEP170|9859|centrosomal protein 170kDa	NM_001042405|CEP170|9859|centrosomal protein 170kDa	NM_014812|CEP170|9859|centrosomal protein 170kDa
hg18_v1_chr18_+_76006795_76006922	0.00222482	SOX2.p2	AK056304|LOC100130522|100130522|hypothetical LOC100130522
hg18_v1_chr5_+_178419938_178420212	0.00218603	SOX2.p2	BC063312|ZNF354C|30832|zinc finger protein 354C	AF525463|ZNF354C|30832|zinc finger protein 354C	NM_014594|ZNF354C|30832|zinc finger protein 354C
hg18_v1_chr12_+_100795213_100795286	0.0021751	SOX2.p2	NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1	BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1
hg18_v1_chr1_-_245561613_245561667	0.00216138	SOX2.p2	BC007263|ZNF496|84838|zinc finger protein 496	NM_032752|ZNF496|84838|zinc finger protein 496
hg18_v1_chr11_+_5925152_5925152	0.00214787	SOX2.p2	NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3
hg18_v1_chr17_+_43328514_43328645	0.00210709	SOX2.p2	NM_003110|SP2|6668|Sp2 transcription factor	BC005914|SP2|6668|Sp2 transcription factor	BC016680|SP2|6668|Sp2 transcription factor	BC033814|SP2|6668|Sp2 transcription factor
hg18_v1_chr6_-_47385599_47385599	0.00207208	SOX2.p2	AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr16_-_30453499_30453504	0.00206802	SOX2.p2	AK292192|ZNF747|65988|zinc finger protein 747
hg18_v1_chr4_-_57216816_57217013	0.00205733	SOX2.p2	AB019573|HOPX|84525|HOP homeobox	AM393649|HOPX|84525|HOP homeobox	DQ892193|HOPX|84525|HOP homeobox	EU176669|HOPX|84525|HOP homeobox	CR626269|HOPX|84525|HOP homeobox	CR600537|HOPX|84525|HOP homeobox
hg18_v1_chr3_-_157755603_157755671	0.00204639	SOX2.p2	CR597465|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)
hg18_v1_chr13_-_51922731_51922806	0.00204172	SOX2.p2	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg18_v1_chr3_-_27500882_27500986	0.00202498	SOX2.p2	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg18_v1_chr1_+_159435728_159435728	0.00201708	SOX2.p2	BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)
hg18_v1_chr7_-_27125738_27125738	0.0020101	SOX2.p2	BC015180|HOXA3|3200|homeobox A3	NM_030661|HOXA3|3200|homeobox A3
hg18_v1_chr16_-_47872880_47872908	0.0019743	SOX2.p2	
hg18_v1_chr1_-_167603623_167603809	0.00195013	SOX2.p2	CR605539|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	CR599535|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)
hg18_v1_chr6_+_71333327_71333366	0.00194113	SOX2.p2	BC018085|C6orf57|135154|chromosome 6 open reading frame 57	NM_145267|C6orf57|135154|chromosome 6 open reading frame 57	BC104649|C6orf57|135154|chromosome 6 open reading frame 57	GQ129294|C6orf57|135154|chromosome 6 open reading frame 57	GQ129295|C6orf57|135154|chromosome 6 open reading frame 57
hg18_v1_chr2_-_131838200_131838200	0.00193316	SOX2.p2	NM_001077637|LOC150786|150786|RAB6C-like
hg18_v1_chr8_+_19841010_19841088	0.0019272	SOX2.p2	AK092286|LPL|4023|lipoprotein lipase	AK290290|LPL|4023|lipoprotein lipase	AK222464|LPL|4023|lipoprotein lipase	AK312311|LPL|4023|lipoprotein lipase	M15856|LPL|4023|lipoprotein lipase	X54516|LPL|4023|lipoprotein lipase
hg18_v1_chrX_-_15782792_15782802	0.00192423	SOX2.p2	AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr10_+_71482542_71482664	0.00189414	SOX2.p2	CR613570|H2AFY2|55506|H2A histone family, member Y2	CR592495|H2AFY2|55506|H2A histone family, member Y2	BC016172|H2AFY2|55506|H2A histone family, member Y2	AK022776|H2AFY2|55506|H2A histone family, member Y2	AK131057|H2AFY2|55506|H2A histone family, member Y2	AF151534|H2AFY2|55506|H2A histone family, member Y2	AF336304|H2AFY2|55506|H2A histone family, member Y2	AK022475|H2AFY2|55506|H2A histone family, member Y2
hg18_v1_chr14_+_37746937_37746954	0.00189342	SOX2.p2	BX248780|SSTR1|6751|somatostatin receptor 1	NM_001049|SSTR1|6751|somatostatin receptor 1
hg18_v1_chr1_-_78217278_78217351	0.00187071	SOX2.p2	DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1	EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1	U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1	BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1	AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1
hg18_v1_chr9_+_131637472_131637538	0.00185977	SOX2.p2	NM_001110303|USP20|10868|ubiquitin specific peptidase 20	NM_006676|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr1_+_28717234_28717346	0.00184748	SOX2.p2	X12654|RCC1|1104|regulator of chromosome condensation 1	NM_001048194|RCC1|1104|regulator of chromosome condensation 1	NM_001048195|RCC1|1104|regulator of chromosome condensation 1	NM_001269|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr10_+_80942362_80942362	0.00184457	SOX2.p2	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1	NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1
hg18_v1_chr12_-_6950089_6950184	0.00183665	SOX2.p2	AK298217|PHB2|11331|prohibitin 2	CR603221|PHB2|11331|prohibitin 2	CR620908|PHB2|11331|prohibitin 2	CR625390|PHB2|11331|prohibitin 2	AK301316|PHB2|11331|prohibitin 2	AF126021|PHB2|11331|prohibitin 2	NM_007273|PHB2|11331|prohibitin 2	BC110322|PHB2|11331|prohibitin 2	NM_001144831|PHB2|11331|prohibitin 2
hg18_v1_chr15_+_40628283_40628359	0.00183237	SOX2.p2	NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2	NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2	BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2	AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2
hg18_v1_chr4_+_86968069_86968088	0.00182877	SOX2.p2	AK307423|ARHGAP24|83478|Rho GTPase activating protein 24
hg18_v1_chr5_-_146869811_146869828	0.00182212	SOX2.p2	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3	NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3
hg18_v1_chr5_-_172976212_172976257	0.00181954	SOX2.p2	CR599483|BOD1|91272|biorientation of chromosomes in cell division 1	CR607873|BOD1|91272|biorientation of chromosomes in cell division 1	CR592937|BOD1|91272|biorientation of chromosomes in cell division 1	AK301982|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr2_+_201644706_201645001	0.00181378	SOX2.p2	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa	AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg18_v1_chr6_+_18263514_18263755	0.0018125	SOX2.p2	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B	NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B	AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B
hg18_v1_chr16_+_67130616_67130782	0.0017907	SOX2.p2	BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)	AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)	BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)
hg18_v1_chr15_+_39412447_39412471	0.00177729	SOX2.p2	AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1
hg18_v1_chr6_-_47385605_47385703	0.00176814	SOX2.p2	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr17_-_17125214_17125313	0.00175446	SOX2.p2	CR613300|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR597915|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR590945|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR602972|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR608585|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR595552|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR599192|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR617410|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR618089|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR619826|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR622277|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)	CR594817|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)
hg18_v1_chr1_+_92268072_92268224	0.00175273	SOX2.p2	NM_173567|EPHX4|253152|epoxide hydrolase 4	BC041475|EPHX4|253152|epoxide hydrolase 4	AK074822|EPHX4|253152|epoxide hydrolase 4
hg18_v1_chrX_-_15782826_15782834	0.00174896	SOX2.p2	
hg18_v1_chr9_+_96561750_96561886	0.00174823	SOX2.p2	CR626537|C9orf3|84909|chromosome 9 open reading frame 3	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3	AJ560639|C9orf3|84909|chromosome 9 open reading frame 3
hg18_v1_chr10_-_90740935_90741126	0.00174013	SOX2.p2	AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta	CR590615|ACTA2|59|actin, alpha 2, smooth muscle, aorta	NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta
hg18_v1_chr5_-_178977441_178977522	0.0017367	SOX2.p2	AK298193|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)
hg18_v1_chr7_-_157054403_157054504	0.00173407	SOX2.p2	CR590102|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR596761|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	CR604034|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2
hg18_v1_chr6_+_26128656_26128696	0.00172776	SOX2.p2	BC066245|HIST1H3A|8350|histone cluster 1, H3a	BC066246|HIST1H3A|8350|histone cluster 1, H3a	BC066247|HIST1H3A|8350|histone cluster 1, H3a	BC067490|HIST1H3A|8350|histone cluster 1, H3a	BC067491|HIST1H3A|8350|histone cluster 1, H3a	BC069303|HIST1H3A|8350|histone cluster 1, H3a	CR541858|HIST1H3A|8350|histone cluster 1, H3a	NM_003529|HIST1H3A|8350|histone cluster 1, H3a
hg18_v1_chr14_+_57964462_57964507	0.00167748	SOX2.p2	NM_014749|KIAA0586|9786|KIAA0586	BC066647|KIAA0586|9786|KIAA0586
hg18_v1_chrX_-_74659596_74659604	0.0016487	SOX2.p2	AK128587|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK303896|ZDHHC15|158866|zinc finger, DHHC-type containing 15	AK056374|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103980|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103981|ZDHHC15|158866|zinc finger, DHHC-type containing 15	BC103982|ZDHHC15|158866|zinc finger, DHHC-type containing 15
hg18_v1_chr14_-_22549168_22549199	0.00164499	SOX2.p2	BC014299|C14orf93|60686|chromosome 14 open reading frame 93	CR604681|C14orf93|60686|chromosome 14 open reading frame 93	BX161507|C14orf93|60686|chromosome 14 open reading frame 93	BX161383|C14orf93|60686|chromosome 14 open reading frame 93	BX161417|C14orf93|60686|chromosome 14 open reading frame 93	CR594518|C14orf93|60686|chromosome 14 open reading frame 93	AK023026|C14orf93|60686|chromosome 14 open reading frame 93	AK022216|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93	NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93	NM_021944|C14orf93|60686|chromosome 14 open reading frame 93
hg18_v1_chr8_+_19840861_19841003	0.00163713	SOX2.p2	NM_000237|LPL|4023|lipoprotein lipase
hg18_v1_chr6_-_42821761_42821788	0.00161871	SOX2.p2	CR602269|TBCC|6903|tubulin folding cofactor C	CR590261|TBCC|6903|tubulin folding cofactor C	CR590736|TBCC|6903|tubulin folding cofactor C	CR604530|TBCC|6903|tubulin folding cofactor C	CR623339|TBCC|6903|tubulin folding cofactor C	BT007002|TBCC|6903|tubulin folding cofactor C
hg18_v1_chrX_-_15782859_15782859	0.00161161	SOX2.p2	AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit
hg18_v1_chr7_-_26206845_26206888	0.00158693	SOX2.p2	BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr19_-_51856129_51856292	0.00158195	SOX2.p2	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)
hg18_v1_chr12_+_6926014_6926149	0.00157334	SOX2.p2	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6
hg18_v1_chr5_+_96296842_96296856	0.00156533	SOX2.p2	AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase
hg18_v1_chr12_+_64869296_64869345	0.00156318	SOX2.p2	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr15_+_58083712_58083729	0.0015629	SOX2.p2	AK290944|FOXB1|27023|forkhead box B1	NM_012182|FOXB1|27023|forkhead box B1
hg18_v1_chr9_+_129870416_129870464	0.00155693	SOX2.p2	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg18_v1_chr16_+_57055717_57055809	0.00155275	SOX2.p2	AK126574|NDRG4|65009|NDRG family member 4	CR936733|NDRG4|65009|NDRG family member 4
hg18_v1_chr11_-_118167066_118167072	0.00151881	SOX2.p2	BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6
hg18_v1_chr17_-_53784494_53784576	0.0015122	SOX2.p2	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR616121|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605018|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR605330|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594796|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR613341|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR594476|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	CR622557|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)	AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)
hg18_v1_chr19_-_12456625_12456632	0.00148712	SOX2.p2	NM_152601|ZNF709|163051|zinc finger protein 709
hg18_v1_chr6_-_111242883_111242939	0.00147624	SOX2.p2	BC047513|CDK19|23097|cyclin-dependent kinase 19
hg18_v1_chr11_-_46572160_46572199	0.00147546	SOX2.p2	AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1
hg18_v1_chr8_+_19841209_19841231	0.00146335	SOX2.p2	BT006726|LPL|4023|lipoprotein lipase	CR457054|LPL|4023|lipoprotein lipase	DQ893541|LPL|4023|lipoprotein lipase	DQ893751|LPL|4023|lipoprotein lipase
hg18_v1_chr10_+_94584449_94584449	0.00145401	SOX2.p2	NM_001013848|EXOC6|54536|exocyst complex component 6
hg18_v1_chr3_+_95264513_95264555	0.00145207	SOX2.p2	CR594640|NSUN3|63899|NOP2/Sun domain family, member 3	AF169972|NSUN3|63899|NOP2/Sun domain family, member 3	BC018432|NSUN3|63899|NOP2/Sun domain family, member 3	BC020602|NSUN3|63899|NOP2/Sun domain family, member 3	BC057238|NSUN3|63899|NOP2/Sun domain family, member 3	NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3	AK026262|NSUN3|63899|NOP2/Sun domain family, member 3
hg18_v1_chr1_+_113417387_113417551	0.00143895	SOX2.p2	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2	BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2
hg18_v1_chr9_-_14303899_14303907	0.00140089	SOX2.p2	AK299605|NFIB|4781|nuclear factor I/B
hg18_v1_chr20_-_61355108_61355249	0.00138929	SOX2.p2	AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4
hg18_v1_chr3_-_187138342_187138468	0.00138192	SOX2.p2	DQ890937|TRA2B|6434|transformer 2 beta homolog (Drosophila)	EU176532|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR603112|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U61267|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR590258|TRA2B|6434|transformer 2 beta homolog (Drosophila)	CR608950|TRA2B|6434|transformer 2 beta homolog (Drosophila)	U68063|TRA2B|6434|transformer 2 beta homolog (Drosophila)	AK301118|TRA2B|6434|transformer 2 beta homolog (Drosophila)	BC005898|TRA2B|6434|transformer 2 beta homolog (Drosophila)
hg18_v1_chr13_-_51631996_51631996	0.00137913	SOX2.p2	NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3
hg18_v1_chr5_-_172976259_172976299	0.00137809	SOX2.p2	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1	NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1	NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1
hg18_v1_chr12_-_6949877_6950088	0.00136338	SOX2.p2	DQ891808|PHB2|11331|prohibitin 2	EU176626|PHB2|11331|prohibitin 2	CR617504|PHB2|11331|prohibitin 2	BC014766|PHB2|11331|prohibitin 2	BC013228|PHB2|11331|prohibitin 2	CR612358|PHB2|11331|prohibitin 2	CR593466|PHB2|11331|prohibitin 2	AF178980|PHB2|11331|prohibitin 2	CR618054|PHB2|11331|prohibitin 2	CR593674|PHB2|11331|prohibitin 2	CR595625|PHB2|11331|prohibitin 2	CR602122|PHB2|11331|prohibitin 2	CR604561|PHB2|11331|prohibitin 2	CR613611|PHB2|11331|prohibitin 2	CR620594|PHB2|11331|prohibitin 2	CR624331|PHB2|11331|prohibitin 2	AF150962|PHB2|11331|prohibitin 2
hg18_v1_chr2_+_70168238_70168264	0.00136017	SOX2.p2	BC039742|PCBP1|5093|poly(rC) binding protein 1	CR600333|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr18_-_20105900_20105919	0.00133843	SOX2.p2	AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A
hg18_v1_chr17_-_602218_602253	0.0013331	SOX2.p2	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4
hg18_v1_chr9_-_127043169_127043434	0.00130564	SOX2.p2	AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr1_+_61315516_61315533	0.00129699	SOX2.p2	AK299289|NFIA|4774|nuclear factor I/A	NM_001145511|NFIA|4774|nuclear factor I/A
hg18_v1_chr16_-_29844855_29845019	0.00128723	SOX2.p2	DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13	DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13	AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13	AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13
hg18_v1_chr14_-_72995032_72995056	0.00128093	SOX2.p2	BC068476|NUMB|8650|numb homolog (Drosophila)	NM_001005743|NUMB|8650|numb homolog (Drosophila)	NM_001005744|NUMB|8650|numb homolog (Drosophila)	NM_001005745|NUMB|8650|numb homolog (Drosophila)	NM_003744|NUMB|8650|numb homolog (Drosophila)
hg18_v1_chrX_-_119487183_119487261	0.00128074	SOX2.p2	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2	S79873|LAMP2|3920|lysosomal-associated membrane protein 2	U36336|LAMP2|3920|lysosomal-associated membrane protein 2	X77196|LAMP2|3920|lysosomal-associated membrane protein 2	AK295038|LAMP2|3920|lysosomal-associated membrane protein 2	NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2	NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2	NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2
hg18_v1_chr3_+_47819631_47819689	0.00123805	SOX2.p2	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30
hg18_v1_chr2_+_10101081_10101406	0.00122314	SOX2.p2	BC063286|KLF11|8462|Kruppel-like factor 11	NM_003597|KLF11|8462|Kruppel-like factor 11	AK315345|KLF11|8462|Kruppel-like factor 11	AF272830|KLF11|8462|Kruppel-like factor 11	AK289816|KLF11|8462|Kruppel-like factor 11	BC069383|KLF11|8462|Kruppel-like factor 11	BC074922|KLF11|8462|Kruppel-like factor 11	AF028008|KLF11|8462|Kruppel-like factor 11	AJ275989|KLF11|8462|Kruppel-like factor 11	AK316439|KLF11|8462|Kruppel-like factor 11	NM_001177716|KLF11|8462|Kruppel-like factor 11
hg18_v1_chr19_+_62483093_62483243	0.00122017	SOX2.p2	AK298106|ZNF460|10794|zinc finger protein 460
hg18_v1_chr5_-_49772940_49772958	0.00120934	SOX2.p2	CR621536|EMB|133418|embigin	AK300860|EMB|133418|embigin	BC059398|EMB|133418|embigin
hg18_v1_chr3_-_57301749_57301749	0.00119369	SOX2.p2	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14	NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14
hg18_v1_chr9_-_127043436_127043453	0.00118632	SOX2.p2	AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr17_-_53282376_53282431	0.00118209	SOX2.p2	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23	AF161447|MRPS23|51649|mitochondrial ribosomal protein S23	AK312729|MRPS23|51649|mitochondrial ribosomal protein S23	BC000242|MRPS23|51649|mitochondrial ribosomal protein S23	CR622466|MRPS23|51649|mitochondrial ribosomal protein S23	CR622139|MRPS23|51649|mitochondrial ribosomal protein S23	NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23
hg18_v1_chr16_+_65195435_65195560	0.0011758	SOX2.p2	AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3
hg18_v1_chr8_+_23442307_23442323	0.00117161	SOX2.p2	NM_016612|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr7_-_130004119_130004151	0.00117002	SOX2.p2	AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2	NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2
hg18_v1_chr17_-_44794325_44794833	0.00114053	SOX2.p2	CR933680|ZNF652|22834|zinc finger protein 652	BC034987|ZNF652|22834|zinc finger protein 652	AK292667|ZNF652|22834|zinc finger protein 652	NM_001145365|ZNF652|22834|zinc finger protein 652	AB023141|ZNF652|22834|zinc finger protein 652	BC152440|ZNF652|22834|zinc finger protein 652	NM_014897|ZNF652|22834|zinc finger protein 652
hg18_v1_chr17_+_53515725_53515844	0.0011342	SOX2.p2	AK312125|DYNLL2|140735|dynein, light chain, LC8-type 2	NM_080677|DYNLL2|140735|dynein, light chain, LC8-type 2	BC010744|DYNLL2|140735|dynein, light chain, LC8-type 2
hg18_v1_chr8_+_17824631_17824722	0.00112342	SOX2.p2	L27841|PCM1|5108|pericentriolar material 1	NM_006197|PCM1|5108|pericentriolar material 1
hg18_v1_chr2_+_198088559_198088564	0.00111854	SOX2.p2	AK289377|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	AF250319|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)	NM_199482|MOBKL3|25843|MOB1, Mps One Binder kinase activator-like 3 (yeast)
hg18_v1_chr12_+_64869181_64869269	0.00109221	SOX2.p2	BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3	NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3	AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3	BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr22_+_37407899_37407903	0.00109212	SOX2.p2	NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)
hg18_v1_chr17_-_59403932_59404009	0.00109065	SOX2.p2	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit
hg18_v1_chrX_+_46977306_46977512	0.00108241	SOX2.p2	AK055588|USP11|8237|ubiquitin specific peptidase 11	AK098394|USP11|8237|ubiquitin specific peptidase 11	CR606453|USP11|8237|ubiquitin specific peptidase 11	BC073960|USP11|8237|ubiquitin specific peptidase 11	BC063668|USP11|8237|ubiquitin specific peptidase 11	AB073597|USP11|8237|ubiquitin specific peptidase 11	BC000350|USP11|8237|ubiquitin specific peptidase 11	U44839|USP11|8237|ubiquitin specific peptidase 11	AK294635|USP11|8237|ubiquitin specific peptidase 11
hg18_v1_chr8_+_19841120_19841170	0.00107313	SOX2.p2	X14390|LPL|4023|lipoprotein lipase	BC011353|LPL|4023|lipoprotein lipase
hg18_v1_chr7_+_23603495_23603585	0.00106845	SOX2.p2	NM_138771|CCDC126|90693|coiled-coil domain containing 126	AK289911|CCDC126|90693|coiled-coil domain containing 126	AY358713|CCDC126|90693|coiled-coil domain containing 126
hg18_v1_chr10_-_64248932_64248932	0.00105365	SOX2.p2	AK312813|EGR2|1959|early growth response 2	NM_001136178|EGR2|1959|early growth response 2
hg18_v1_chr6_-_30763057_30763079	0.00105294	SOX2.p2	AB075829|KIAA1949|170954|KIAA1949	NM_001134870|KIAA1949|170954|KIAA1949	AK125639|KIAA1949|170954|KIAA1949
hg18_v1_chr16_+_1143241_1143413	0.00102857	SOX2.p2	AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit	AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit
hg18_v1_chr7_-_115458064_115458112	0.00101811	SOX2.p2	CR933605|TFEC|22797|transcription factor EC
hg18_v1_chr6_-_90119329_90119684	0.00101741	SOX2.p2	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)
hg18_v1_chr1_+_36121403_36121609	0.00101625	SOX2.p2	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1
hg18_v1_chr7_+_142885087_142885087	0.000998548	SOX2.p2	BC101157|TAS2R41|259287|taste receptor, type 2, member 41	BC101158|TAS2R41|259287|taste receptor, type 2, member 41	NM_176883|TAS2R41|259287|taste receptor, type 2, member 41
hg18_v1_chr1_+_243199906_243200064	0.000986988	SOX2.p2	AK090927|EFCAB2|84288|EF-hand calcium binding domain 2
hg18_v1_chr11_-_107234702_107234729	0.000974186	SOX2.p2	CR595056|SLC35F2|54733|solute carrier family 35, member F2	AK023080|SLC35F2|54733|solute carrier family 35, member F2	BC048302|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr2_+_70168218_70168227	0.00097047	SOX2.p2	AK314225|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr1_+_104093962_104094088	0.000969261	SOX2.p2	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)	NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)	NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)	BC063129|AMY1A|276|amylase, alpha 1A (salivary)	BC070302|AMY1A|276|amylase, alpha 1A (salivary)	BC092444|AMY1A|276|amylase, alpha 1A (salivary)	BC132985|AMY1A|276|amylase, alpha 1A (salivary)	BC132987|AMY1A|276|amylase, alpha 1A (salivary)	BC132997|AMY1A|276|amylase, alpha 1A (salivary)	BC144452|AMY1A|276|amylase, alpha 1A (salivary)	BC132995|AMY1A|276|amylase, alpha 1A (salivary)
hg18_v1_chr1_-_154987708_154987898	0.0009407	SOX2.p2	AK292325|HDGF|3068|hepatoma-derived growth factor	DQ893406|HDGF|3068|hepatoma-derived growth factor	DQ896724|HDGF|3068|hepatoma-derived growth factor
hg18_v1_chr7_+_87401368_87401670	0.000915856	SOX2.p2	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22	BC092465|ADAM22|53616|ADAM metallopeptidase domain 22	AK291010|ADAM22|53616|ADAM metallopeptidase domain 22	BC062433|ADAM22|53616|ADAM metallopeptidase domain 22	NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22	NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22	NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22	BC125118|ADAM22|53616|ADAM metallopeptidase domain 22	BC125117|ADAM22|53616|ADAM metallopeptidase domain 22	AF073291|ADAM22|53616|ADAM metallopeptidase domain 22	AF155381|ADAM22|53616|ADAM metallopeptidase domain 22	AF155382|ADAM22|53616|ADAM metallopeptidase domain 22
hg18_v1_chr19_-_22744623_22744623	0.000910974	SOX2.p2	NM_001080409|ZNF99|7652|zinc finger protein 99
hg18_v1_chr19_+_45774626_45774631	0.000904251	SOX2.p2	BC022855|SHKBP1|92799|SH3KBP1 binding protein 1
hg18_v1_chr17_-_24069299_24069412	0.000902359	SOX2.p2	AF327350|RAB34|83871|RAB34, member RAS oncogene family	AK297850|RAB34|83871|RAB34, member RAS oncogene family	AK027312|RAB34|83871|RAB34, member RAS oncogene family	AJ277106|RAB34|83871|RAB34, member RAS oncogene family	AK304633|RAB34|83871|RAB34, member RAS oncogene family	BC066904|RAB34|83871|RAB34, member RAS oncogene family	NM_001142624|RAB34|83871|RAB34, member RAS oncogene family	NM_001142625|RAB34|83871|RAB34, member RAS oncogene family	NM_001144943|RAB34|83871|RAB34, member RAS oncogene family
hg18_v1_chr4_+_123967265_123967323	0.00089917	SOX2.p2	J04513|FGF2|2247|fibroblast growth factor 2 (basic)	NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)	BC111737|FGF2|2247|fibroblast growth factor 2 (basic)
hg18_v1_chr9_-_131637321_131637359	0.000897934	SOX2.p2	AF218421|C9orf78|51759|chromosome 9 open reading frame 78	BC007664|C9orf78|51759|chromosome 9 open reading frame 78	BC017570|C9orf78|51759|chromosome 9 open reading frame 78
hg18_v1_chr8_-_30826074_30826149	0.000884291	SOX2.p2	AF285605|TEX15|56154|testis expressed 15	NM_031271|TEX15|56154|testis expressed 15	BC140934|TEX15|56154|testis expressed 15
hg18_v1_chr6_-_47385604_47385604	0.000878545	SOX2.p2	AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21
hg18_v1_chr1_-_172059780_172059949	0.000859599	SOX2.p2	CR617320|CENPL|91687|centromere protein L	AK055606|CENPL|91687|centromere protein L	BC019022|CENPL|91687|centromere protein L	NM_001171182|CENPL|91687|centromere protein L	BC007071|CENPL|91687|centromere protein L
hg18_v1_chr12_-_98072602_98072806	0.000854378	SOX2.p2	BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	CR602042|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B
hg18_v1_chr17_-_43328141_43328158	0.000822963	SOX2.p2	
hg18_v1_chr9_-_127043455_127043615	0.000815346	SOX2.p2	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg18_v1_chr1_-_245237952_245237957	0.000803205	SOX2.p2	BC041082|ZNF695|57116|zinc finger protein 695
hg18_v1_chr18_-_51406359_51406477	0.000789323	SOX2.p2	M74719|TCF4|6925|transcription factor 4
hg18_v1_chr1_+_20081510_20081590	0.000779658	SOX2.p2	
hg18_v1_chr17_-_40263704_40263706	0.000775095	SOX2.p2	NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	CR594677|GJC1|10052|gap junction protein, gamma 1, 45kDa
hg18_v1_chr7_-_26206889_26206890	0.000772426	SOX2.p2	AK129839|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	AK289429|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1
hg18_v1_chr22_+_43451600_43451668	0.000770828	SOX2.p2	AK091884|PRR5|55615|proline rich 5 (renal)	CR605746|PRR5|55615|proline rich 5 (renal)	AK055848|PRR5|55615|proline rich 5 (renal)
hg18_v1_chr17_+_40141586_40141591	0.000752473	SOX2.p2	BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)
hg18_v1_chr2_+_70168200_70168215	0.000735411	SOX2.p2	CR613158|PCBP1|5093|poly(rC) binding protein 1	U24223|PCBP1|5093|poly(rC) binding protein 1	CR618539|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr16_-_67977041_67977232	0.00072676	SOX2.p2	U95970|TERF2|7014|telomeric repeat binding factor 2
hg18_v1_chr5_+_173247919_173248049	0.000723915	SOX2.p2	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4
hg18_v1_chr8_+_23442331_23442388	0.000723817	SOX2.p2	BC132799|SLC25A37|51312|solute carrier family 25, member 37	BC132801|SLC25A37|51312|solute carrier family 25, member 37
hg18_v1_chr11_-_66070050_66070077	0.000714452	SOX2.p2	BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24
hg18_v1_chr18_-_42956645_42956729	0.000714251	SOX2.p2	CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1	DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1	EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596950|IER3IP1|51124|immediate early response 3 interacting protein 1	BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1	BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1	AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1	AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1	CR596209|IER3IP1|51124|immediate early response 3 interacting protein 1	AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1	AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1	CR614259|IER3IP1|51124|immediate early response 3 interacting protein 1
hg18_v1_chr1_-_43197123_43197195	0.000713714	SOX2.p2	AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1
hg18_v1_chr20_-_61317891_61318046	0.000702204	SOX2.p2	BC050284|YTHDF1|54915|YTH domain family, member 1	NM_017798|YTHDF1|54915|YTH domain family, member 1
hg18_v1_chr11_-_64302720_64302748	0.000701758	SOX2.p2	Y08766|SF1|7536|splicing factor 1
hg18_v1_chr1_+_218334041_218334110	0.00068696	SOX2.p2	AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial
hg18_v1_chr9_+_131637539_131637548	0.000680573	SOX2.p2	BC033669|USP20|10868|ubiquitin specific peptidase 20
hg18_v1_chr15_-_32662352_32662371	0.00065467	SOX2.p2	BX647673|GOLGA8B|440270|golgin A8 family, member B
hg18_v1_chr4_+_189297591_189297638	0.000645298	SOX2.p2	AK093499|TRIML1|339976|tripartite motif family-like 1	NM_178556|TRIML1|339976|tripartite motif family-like 1	BC113860|TRIML1|339976|tripartite motif family-like 1	BC114469|TRIML1|339976|tripartite motif family-like 1
hg18_v1_chr1_+_32777556_32777707	0.00063775	SOX2.p2	AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A	AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A	BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A
hg18_v1_chr7_-_105712646_105712873	0.000623654	SOX2.p2	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase	BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase	CR593609|NAMPT|10135|nicotinamide phosphoribosyltransferase	NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase
hg18_v1_chr15_-_29070909_29071210	0.000623377	SOX2.p2	AK000320|MTMR10|54893|myotubularin related protein 10	AM392869|MTMR10|54893|myotubularin related protein 10	BC094750|MTMR10|54893|myotubularin related protein 10	CR607167|MTMR10|54893|myotubularin related protein 10	BC063296|MTMR10|54893|myotubularin related protein 10	NM_017762|MTMR10|54893|myotubularin related protein 10
hg18_v1_chr4_-_111339201_111339268	0.000615898	SOX2.p2	BC001305|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	AK027031|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_001130721|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)	NM_024090|ELOVL6|79071|ELOVL family member 6, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast)
hg18_v1_chr19_+_18124998_18125066	0.000588094	SOX2.p2	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)	BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg18_v1_chr12_-_70343656_70343699	0.000586582	SOX2.p2	
hg18_v1_chr4_-_87500398_87500398	0.000581601	SOX2.p2	NM_138980|MAPK10|5602|mitogen-activated protein kinase 10	NM_138982|MAPK10|5602|mitogen-activated protein kinase 10
hg18_v1_chr12_+_64869271_64869283	0.000565329	SOX2.p2	AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3
hg18_v1_chr3_-_129023850_129024390	0.000564499	SOX2.p2	CR456835|MGLL|11343|monoglyceride lipase	AK304844|MGLL|11343|monoglyceride lipase	BC000551|MGLL|11343|monoglyceride lipase	U67963|MGLL|11343|monoglyceride lipase	CR622559|MGLL|11343|monoglyceride lipase	AK315529|MGLL|11343|monoglyceride lipase	BC006230|MGLL|11343|monoglyceride lipase	NM_007283|MGLL|11343|monoglyceride lipase
hg18_v1_chr1_+_20081495_20081507	0.000537615	SOX2.p2	AB007928|OTUD3|23252|OTU domain containing 3
hg18_v1_chr13_+_44592585_44592644	0.000527298	SOX2.p2	NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa
hg18_v1_chr22_-_48866484_48866484	0.000500456	SOX2.p2	AK124264|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	NM_015166|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1
hg18_v1_chr12_+_132217285_132217286	0.000498578	SOX2.p2	AK314784|ZNF10|7556|zinc finger protein 10	BC024182|ZNF10|7556|zinc finger protein 10	NM_015394|ZNF10|7556|zinc finger protein 10
hg18_v1_chr6_-_30762957_30762971	0.000496674	SOX2.p2	AB073600|KIAA1949|170954|KIAA1949	BX647622|KIAA1949|170954|KIAA1949
hg18_v1_chr12_-_44948976_44949044	0.000490102	SOX2.p2	BC010620|SLC38A1|81539|solute carrier family 38, member 1	BX648676|SLC38A1|81539|solute carrier family 38, member 1
hg18_v1_chr19_-_7607852_7607854	0.000486401	SOX2.p2	
hg18_v1_chr3_+_10043097_10043121	0.000468742	SOX2.p2	AK307512|FANCD2|2177|Fanconi anemia, complementation group D2	NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2	NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2
hg18_v1_chr15_+_58083798_58083884	0.000465108	SOX2.p2	AK314075|FOXB1|27023|forkhead box B1
hg18_v1_chr3_-_95264349_95264520	0.000441576	SOX2.p2	BC045541|DHFRL1|200895|dihydrofolate reductase-like 1	AL832912|DHFRL1|200895|dihydrofolate reductase-like 1	BC063379|DHFRL1|200895|dihydrofolate reductase-like 1	NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1
hg18_v1_chr12_-_49763566_49763715	0.000438041	SOX2.p2	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2
hg18_v1_chr7_-_8268292_8268341	0.000420977	SOX2.p2	U26592|ICA1|3382|islet cell autoantigen 1, 69kDa	AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa	NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	CR605198|ICA1|3382|islet cell autoantigen 1, 69kDa	CR620744|ICA1|3382|islet cell autoantigen 1, 69kDa
hg18_v1_chr1_+_205736095_205736308	0.000399646	SOX2.p2	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)	X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)
hg18_v1_chr12_-_70343790_70343940	0.000376279	SOX2.p2	AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing	BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing	BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing	BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing	BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing
hg18_v1_chr1_+_64012154_64012341	0.000357226	SOX2.p2	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1	M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1
hg18_v1_chrX_+_49213543_49213553	0.000354339	SOX2.p2	CR542236|GAGE4|2576|G antigen 4	DQ891160|GAGE5|2577|G antigen 5	NM_001098405|GAGE12F|100008586|G antigen 12F	U19144|GAGE3|2575|G antigen 3	BC069086|GAGE7|2579|G antigen 7
hg18_v1_chr6_+_123152044_123152189	0.000349237	SOX2.p2	CR620022|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A
hg18_v1_chr16_-_67039874_67040091	0.000325045	SOX2.p2	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg18_v1_chr2_-_85969527_85969667	0.000315249	SOX2.p2	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5
hg18_v1_chr14_+_78815406_78815508	0.000306674	SOX2.p2	NM_001105250|NRXN3|9369|neurexin 3	NM_138970|NRXN3|9369|neurexin 3	AK056530|NRXN3|9369|neurexin 3	BC059368|NRXN3|9369|neurexin 3	BC068469|NRXN3|9369|neurexin 3
hg18_v1_chr6_-_27890496_27890585	0.000306523	SOX2.p2	BC066232|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066233|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066234|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066235|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066236|HIST1H2AJ|8331|histone cluster 1, H2aj	BC066237|HIST1H2AJ|8331|histone cluster 1, H2aj	NM_021066|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133048|HIST1H2AJ|8331|histone cluster 1, H2aj	BC133050|HIST1H2AJ|8331|histone cluster 1, H2aj
hg18_v1_chr20_-_4752067_4752321	0.000304827	SOX2.p2	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	CR620887|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2
hg18_v1_chr14_+_49304657_49304685	0.000300703	SOX2.p2	AF113131|KLHDC2|23588|kelch domain containing 2
hg18_v1_chr1_-_206484258_206484287	0.000299099	SOX2.p2	NM_025179|PLXNA2|5362|plexin A2
hg18_v1_chr7_+_116447527_116447676	0.000250317	SOX2.p2	AY009152|ST7|7982|suppression of tumorigenicity 7	AY009153|ST7|7982|suppression of tumorigenicity 7	AK297510|ST7|7982|suppression of tumorigenicity 7
hg18_v1_chr11_-_107235123_107235123	0.000248904	SOX2.p2	NM_017515|SLC35F2|54733|solute carrier family 35, member F2
hg18_v1_chr7_-_148211533_148211559	0.000246331	SOX2.p2	AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)
hg18_v1_chr2_+_70168407_70168436	0.000212418	SOX2.p2	AK130439|PCBP1|5093|poly(rC) binding protein 1
hg18_v1_chr1_+_28717349_28717390	0.000207897	SOX2.p2	BC069198|RCC1|1104|regulator of chromosome condensation 1
hg18_v1_chr1_-_224563820_224563820	0.000200351	SOX2.p2	BC045625|LIN9|286826|lin-9 homolog (C. elegans)	NM_173083|LIN9|286826|lin-9 homolog (C. elegans)
hg18_v1_chr1_-_223683141_223683141	0.000194874	SOX2.p2	NM_194442|LBR|3930|lamin B receptor
hg18_v1_chr15_+_72006015_72006173	0.00018158	SOX2.p2	DQ893331|LOXL1|4016|lysyl oxidase-like 1
hg18_v1_chr3_-_45242624_45242801	0.000169185	SOX2.p2	AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR593631|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR615050|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR591255|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	CR621614|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)
hg18_v1_chr2_-_170138558_170138669	0.000153396	SOX2.p2	AL832058|FASTKD1|79675|FAST kinase domains 1	AK074302|FASTKD1|79675|FAST kinase domains 1	BC017950|FASTKD1|79675|FAST kinase domains 1	AK055892|FASTKD1|79675|FAST kinase domains 1	AK130797|FASTKD1|79675|FAST kinase domains 1	BC035241|FASTKD1|79675|FAST kinase domains 1	NM_024622|FASTKD1|79675|FAST kinase domains 1
hg18_v1_chrX_+_136476353_136476514	0.000135435	SOX2.p2	EU532020|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113393|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)	BC113395|ZIC3|7547|Zic family member 3 (odd-paired homolog, Drosophila)
hg18_v1_chr1_-_246804680_246804702	0.000119483	SOX2.p2	NM_001001821|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136924|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34	BC136926|OR2T34|127068|olfactory receptor, family 2, subfamily T, member 34
hg18_v1_chr10_-_61335967_61336090	6.95966e-05	SOX2.p2	
hg18_v1_chr6_-_38778849_38778858	6.811e-05	SOX2.p2	BC015934|GLO1|2739|glyoxalase I	CR625986|GLO1|2739|glyoxalase I
hg18_v1_chr6_+_34312641_34312657	6.15177e-05	SOX2.p2	X14957|HMGA1|3159|high mobility group AT-hook 1	X14958|HMGA1|3159|high mobility group AT-hook 1	CR614979|HMGA1|3159|high mobility group AT-hook 1	AK308245|HMGA1|3159|high mobility group AT-hook 1
hg18_v1_chr5_-_49772973_49773028	5.13532e-05	SOX2.p2	NM_198449|EMB|133418|embigin
hg18_v1_chr9_+_132558972_132559004	3.79882e-05	SOX2.p2	AK001916|EXOSC2|23404|exosome component 2	AK296605|EXOSC2|23404|exosome component 2	NM_014285|EXOSC2|23404|exosome component 2	CR622078|EXOSC2|23404|exosome component 2	AK022460|EXOSC2|23404|exosome component 2	AK090512|EXOSC2|23404|exosome component 2	AK303163|EXOSC2|23404|exosome component 2	BC000747|EXOSC2|23404|exosome component 2	DQ892753|EXOSC2|23404|exosome component 2	EU176744|EXOSC2|23404|exosome component 2	CR590387|EXOSC2|23404|exosome component 2
hg18_v1_chr6_-_53034445_53034538	3.50285e-05	SOX2.p2	AB023153|ICK|22858|intestinal cell (MAK-like) kinase	BC152464|ICK|22858|intestinal cell (MAK-like) kinase	AF152469|ICK|22858|intestinal cell (MAK-like) kinase	AK074892|ICK|22858|intestinal cell (MAK-like) kinase
hg18_v1_chr12_+_119647953_119648071	3.35195e-05	SOX2.p2	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR596637|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR608104|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR615642|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR613518|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR600438|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR607224|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR606773|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	CR604877|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain	AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg18_v1_chr11_+_112763722_112763816	3.26875e-05	SOX2.p2	AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1	NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1	AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1
hg18_v1_chr15_+_39412183_39412402	2.6893e-05	SOX2.p2	CR591711|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_001129897|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_016359|NUSAP1|51203|nucleolar and spindle associated protein 1	NM_018454|NUSAP1|51203|nucleolar and spindle associated protein 1	AK307728|NUSAP1|51203|nucleolar and spindle associated protein 1	AK222819|NUSAP1|51203|nucleolar and spindle associated protein 1	AK290879|NUSAP1|51203|nucleolar and spindle associated protein 1	AK293168|NUSAP1|51203|nucleolar and spindle associated protein 1	BC011008|NUSAP1|51203|nucleolar and spindle associated protein 1	AF217513|NUSAP1|51203|nucleolar and spindle associated protein 1	AK225703|NUSAP1|51203|nucleolar and spindle associated protein 1	AL833611|NUSAP1|51203|nucleolar and spindle associated protein 1	AK023483|NUSAP1|51203|nucleolar and spindle associated protein 1	BC024772|NUSAP1|51203|nucleolar and spindle associated protein 1	AF090915|NUSAP1|51203|nucleolar and spindle associated protein 1	AF290612|NUSAP1|51203|nucleolar and spindle associated protein 1	BC001308|NUSAP1|51203|nucleolar and spindle associated protein 1	CR596878|NUSAP1|51203|nucleolar and spindle associated protein 1	BC012887|NUSAP1|51203|nucleolar and spindle associated protein 1
hg18_v1_chr16_+_87164342_87164398	2.4598e-06	SOX2.p2	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18
