hg19_v2_chr7_-_47621736_47621747	1.66795	AACACUG	ENST00000311160.9|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr11_-_2158507_2158535	1.594	AACACUG	ENST00000381392.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000381395.1|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A) 	ENST00000418738.2|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr10_+_31608054_31608156	1.4605	AACACUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr3_+_61547585_61547585	1.09434	AACACUG	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr2_-_218808771_218808851	1.07926	AACACUG	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr4_-_186877502_186877563	1.06284	AACACUG	ENST00000431902.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000284776.7|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000415274.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr3_-_114790179_114790222	0.982769	AACACUG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr5_+_82767284_82767310	0.962693	AACACUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr22_-_29075853_29075853	0.932679	AACACUG	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chrX_+_51928002_51928017	0.883997	AACACUG	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr2_+_5832799_5832799	0.876179	AACACUG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr10_-_81205373_81205429	0.868184	AACACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr10_-_62704005_62704045	0.8415	AACACUG	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr14_-_30396948_30396998	0.838478	AACACUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr9_+_32384617_32384709	0.83727	AACACUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr4_+_86396265_86396276	0.820002	AACACUG	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr8_-_67525473_67525518	0.807309	AACACUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr3_+_159557637_159557650	0.803091	AACACUG	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr3_+_158991025_158991083	0.741098	AACACUG	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr6_-_52441713_52441784	0.731043	AACACUG	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr2_-_161350305_161350391	0.66931	AACACUG	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr6_+_107811162_107811196	0.665803	AACACUG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr8_+_136469684_136469710	0.649349	AACACUG	ENST00000355849.5|KHDRBS3|ENSG00000131773.9|KH domain containing, RNA binding, signal transduction associated 3
hg19_v2_chr1_+_51701924_51702001	0.637813	AACACUG	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr4_-_111544254_111544270	0.634835	AACACUG	ENST00000306732.3|PITX2|ENSG00000164093.11|paired-like homeodomain 2
hg19_v2_chr3_+_62304712_62304732	0.616037	AACACUG	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr3_+_187930719_187930729	0.591597	AACACUG	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_+_93913713_93913839	0.583417	AACACUG	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr9_-_16870704_16870841	0.581681	AACACUG	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr8_+_55370487_55370503	0.579836	AACACUG	ENST00000297316.4|SOX17|ENSG00000164736.5|SRY (sex determining region Y)-box 17
hg19_v2_chr1_+_84543734_84543775	0.558487	AACACUG	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr17_+_68165657_68165688	0.55441	AACACUG	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr10_-_33623564_33623603	0.546412	AACACUG	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr2_+_102508955_102508955	0.539349	AACACUG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr12_-_131323719_131323746	0.517254	AACACUG	ENST00000392373.2|STX2|ENSG00000111450.9|syntaxin 2
hg19_v2_chr17_-_8534067_8534088	0.50667	AACACUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr6_+_71998506_71998522	0.506081	AACACUG	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr1_-_225840747_225840860	0.50365	AACACUG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr17_-_41856305_41856363	0.480099	AACACUG	ENST00000397937.2|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3 	ENST00000226004.3|DUSP3|ENSG00000108861.4|dual specificity phosphatase 3
hg19_v2_chr3_+_33318914_33318985	0.4794	AACACUG	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr4_-_129208940_129208976	0.470395	AACACUG	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chrX_+_49687216_49687265	0.45234	AACACUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr3_+_39851094_39851151	0.410658	AACACUG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr13_-_110438914_110438937	0.410497	AACACUG	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr1_-_16482554_16482582	0.40325	AACACUG	ENST00000358432.5|EPHA2|ENSG00000142627.9|EPH receptor A2
hg19_v2_chrX_-_51812268_51812368	0.402671	AACACUG	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr4_-_41216619_41216637	0.395657	AACACUG	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr6_+_17600576_17600642	0.385931	AACACUG	ENST00000259963.3|FAM8A1|ENSG00000137414.5|family with sequence similarity 8, member A1
hg19_v2_chr8_-_13372395_13372429	0.377526	AACACUG	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr9_-_23821273_23821313	0.369593	AACACUG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr11_-_86666427_86666450	0.36707	AACACUG	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr3_-_55523966_55523979	0.350868	AACACUG	ENST00000474267.1|WNT5A|ENSG00000114251.9|wingless-type MMTV integration site family, member 5A
hg19_v2_chr12_+_96588143_96588185	0.344291	AACACUG	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr5_-_172198190_172198206	0.340848	AACACUG	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr9_+_90112741_90112761	0.337106	AACACUG	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr4_-_85887503_85887544	0.332208	AACACUG	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr2_-_37899323_37899374	0.329058	AACACUG	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chrX_-_13956737_13956808	0.319007	AACACUG	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr1_-_84464780_84464862	0.31248	AACACUG	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr6_-_122792919_122792970	0.311216	AACACUG	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr7_-_27224795_27224840	0.298361	AACACUG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr1_+_218519577_218519594	0.294997	AACACUG	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr3_-_185542817_185542844	0.291481	AACACUG	ENST00000382199.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr11_-_117186946_117186981	0.287877	AACACUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr18_-_53255766_53255860	0.285565	AACACUG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr14_-_61116168_61116180	0.284855	AACACUG	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr9_-_136933134_136933154	0.281816	AACACUG	ENST00000303407.7|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr2_+_148602058_148602185	0.277396	AACACUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr10_-_126849068_126849138	0.273605	AACACUG	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr7_-_111846435_111846471	0.250177	AACACUG	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr9_-_74980113_74980163	0.240616	AACACUG	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr4_-_5894777_5894799	0.239192	AACACUG	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr3_+_171758344_171758358	0.233855	AACACUG	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr18_+_19749386_19749404	0.212451	AACACUG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr10_+_63661053_63661079	0.210752	AACACUG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr2_+_138721850_138721890	0.207775	AACACUG	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr10_+_93558069_93558154	0.204056	AACACUG	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr11_+_113930291_113930339	0.203738	AACACUG	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr2_+_46926048_46926095	0.199383	AACACUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr17_+_66508537_66508650	0.195956	AACACUG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr17_+_28705921_28706000	0.193256	AACACUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr2_+_30369807_30369847	0.185375	AACACUG	ENST00000379520.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000379519.3|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila) 	ENST00000261353.4|YPEL5|ENSG00000119801.8|yippee-like 5 (Drosophila)
hg19_v2_chr10_-_65225722_65225755	0.185228	AACACUG	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr11_-_9025541_9025596	0.179285	AACACUG	ENST00000525100.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000309166.3|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3 	ENST00000531090.1|NRIP3|ENSG00000175352.6|nuclear receptor interacting protein 3
hg19_v2_chr7_-_108096822_108096889	0.177174	AACACUG	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr12_+_54332535_54332636	0.17689	AACACUG	ENST00000243056.3|HOXC13|ENSG00000123364.3|homeobox C13
hg19_v2_chr13_-_53422640_53422780	0.174397	AACACUG	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr14_-_90085458_90085557	0.170733	AACACUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr13_-_77460525_77460548	0.168283	AACACUG	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr17_+_40118759_40118772	0.163133	AACACUG	ENST00000393892.3|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr5_-_146833485_146833522	0.159318	AACACUG	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr21_-_44846999_44847017	0.157694	AACACUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr15_-_85259330_85259352	0.157242	AACACUG	ENST00000560266.1|SEC11A|ENSG00000140612.9|SEC11 homolog A (S. cerevisiae)
hg19_v2_chr5_-_132113036_132113061	0.156436	AACACUG	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr3_+_43328004_43328095	0.154668	AACACUG	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr21_-_15755446_15755508	0.152675	AACACUG	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr3_+_132136331_132136378	0.152372	AACACUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr17_-_46671323_46671323	0.151643	AACACUG	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr9_-_36400213_36400296	0.151599	AACACUG	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr7_+_43152191_43152211	0.15128	AACACUG	ENST00000395891.2|HECW1|ENSG00000002746.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr7_+_128379346_128379447	0.150439	AACACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr16_+_53088885_53088961	0.147459	AACACUG	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr15_+_57210818_57210930	0.14728	AACACUG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr5_+_177019159_177019213	0.143311	AACACUG	ENST00000332598.6|TMED9|ENSG00000184840.7|transmembrane emp24 protein transport domain containing 9
hg19_v2_chr8_+_20054878_20054950	0.134624	AACACUG	ENST00000276390.2|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 	ENST00000519667.1|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
hg19_v2_chr2_-_240322643_240322661	0.131736	AACACUG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr9_-_6015607_6015634	0.12888	AACACUG	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr17_-_4167142_4167281	0.125317	AACACUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr7_+_129710350_129710434	0.119041	AACACUG	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr20_+_3776371_3776506	0.117353	AACACUG	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr11_+_842808_842881	0.114243	AACACUG	ENST00000397397.2|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000397411.2|TSPAN4|ENSG00000214063.6|tetraspanin 4 	ENST00000397396.1|TSPAN4|ENSG00000214063.6|tetraspanin 4
hg19_v2_chr6_+_99282570_99282591	0.11376	AACACUG	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr17_-_58603568_58603610	0.112568	AACACUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr11_+_101981169_101981210	0.111965	AACACUG	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr20_+_3451650_3451729	0.11133	AACACUG	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr5_-_95158375_95158485	0.111134	AACACUG	ENST00000512469.2|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000379979.4|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000505427.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase) 	ENST00000508780.1|GLRX|ENSG00000173221.9|glutaredoxin (thioltransferase)
hg19_v2_chr17_-_74099795_74099875	0.110572	AACACUG	ENST00000406660.3|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000335146.7|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000405575.4|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000589210.1|EXOC7|ENSG00000182473.16|exocyst complex component 7 	ENST00000607838.1|EXOC7|ENSG00000182473.16|exocyst complex component 7
hg19_v2_chr6_+_32121218_32121354	0.10884	AACACUG	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr6_+_170102210_170102275	0.108322	AACACUG	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr10_+_69644404_69644427	0.108045	AACACUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr17_-_46178527_46178566	0.105264	AACACUG	ENST00000393408.3|CBX1|ENSG00000108468.10|chromobox homolog 1
hg19_v2_chr16_-_71758602_71758604	0.104898	AACACUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr1_-_243418344_243418356	0.103878	AACACUG	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr1_-_205719295_205719404	0.103697	AACACUG	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr11_+_117049445_117049466	0.103449	AACACUG	ENST00000324225.4|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2 	ENST00000532960.1|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2
hg19_v2_chr3_-_88108192_88108203	0.101319	AACACUG	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chrX_+_21857717_21857763	0.0997102	AACACUG	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr5_-_32444828_32444872	0.0990608	AACACUG	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr19_-_57352064_57352102	0.098952	AACACUG	ENST00000326441.9|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593695.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000599577.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593711.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000594389.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000423103.2|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000598410.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000391708.3|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000221722.5|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000599935.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2
hg19_v2_chr3_-_136471204_136471249	0.0975919	AACACUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr16_+_3507985_3508061	0.096977	AACACUG	ENST00000421765.3|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000610180.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000608993.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000360862.5|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000414063.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr5_+_145826867_145826903	0.095917	AACACUG	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr1_+_114472222_114472377	0.0949966	AACACUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr12_-_16761007_16761080	0.0927012	AACACUG	ENST00000354662.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000441439.2|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr11_+_33278811_33279133	0.0925812	AACACUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr3_+_11314099_11314122	0.0915173	AACACUG	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr17_-_62502639_62502849	0.0895828	AACACUG	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr1_+_244214577_244214593	0.0865768	AACACUG	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr11_-_73309228_73309257	0.0854953	AACACUG	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr22_+_38201114_38201214	0.0844032	AACACUG	ENST00000340857.2|H1F0|ENSG00000189060.4|H1 histone family, member 0
hg19_v2_chr14_-_103523745_103523799	0.0822456	AACACUG	ENST00000361246.2|CDC42BPB|ENSG00000198752.5|CDC42 binding protein kinase beta (DMPK-like)
hg19_v2_chr20_-_22565101_22565223	0.0819516	AACACUG	ENST00000419308.2|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr12_-_76478686_76478813	0.0817707	AACACUG	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr7_+_99613195_99613206	0.0817117	AACACUG	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr17_-_202579_202633	0.0809603	AACACUG	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr6_+_53659746_53659817	0.0809241	AACACUG	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr6_+_163835669_163835693	0.0790265	AACACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr5_+_169010638_169010799	0.0756138	AACACUG	ENST00000265295.4|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000506574.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000515224.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000508247.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000513941.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr9_-_135819987_135820020	0.0753493	AACACUG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr7_-_151217001_151217019	0.0751197	AACACUG	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr21_+_34697209_34697245	0.0748291	AACACUG	ENST00000270139.3|IFNAR1|ENSG00000142166.8|interferon (alpha, beta and omega) receptor 1
hg19_v2_chrX_-_119694538_119694555	0.0746352	AACACUG	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr20_-_4982132_4982164	0.0741356	AACACUG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr1_-_173886491_173886516	0.0724143	AACACUG	ENST00000367698.3|SERPINC1|ENSG00000117601.9|serpin peptidase inhibitor, clade C (antithrombin), member 1
hg19_v2_chr5_+_112312416_112312440	0.0721684	AACACUG	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr17_+_57642886_57643006	0.0713343	AACACUG	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr9_+_130374537_130374568	0.0666977	AACACUG	ENST00000373302.3|STXBP1|ENSG00000136854.13|syntaxin binding protein 1 	ENST00000373299.1|STXBP1|ENSG00000136854.13|syntaxin binding protein 1
hg19_v2_chr2_+_178257372_178257523	0.0656312	AACACUG	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr12_+_12938541_12938600	0.065376	AACACUG	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr17_+_38171614_38171635	0.0641478	AACACUG	ENST00000583218.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394149.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr9_-_123476719_123476810	0.0607906	AACACUG	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr2_-_50574856_50574892	0.0600988	AACACUG	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chrX_+_153686614_153686629	0.0597577	AACACUG	ENST00000369682.3|PLXNA3|ENSG00000130827.5|plexin A3
hg19_v2_chr5_-_148930960_148931013	0.0589742	AACACUG	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr21_-_39870339_39870443	0.0585986	AACACUG	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr2_+_135676381_135676435	0.0585426	AACACUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr4_+_183164574_183164586	0.0577843	AACACUG	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr19_+_7459998_7460046	0.0575362	AACACUG	ENST00000319670.9|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18 	ENST00000599752.1|ARHGEF18|ENSG00000104880.13|Rho/Rac guanine nucleotide exchange factor (GEF) 18
hg19_v2_chr1_+_110162448_110162517	0.0562616	AACACUG	ENST00000342115.4|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000469039.2|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000474459.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000528667.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr3_-_116164306_116164380	0.055679	AACACUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr15_+_77712993_77713081	0.0549241	AACACUG	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr15_+_62853562_62853614	0.0532067	AACACUG	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr19_+_19322758_19322782	0.0530962	AACACUG	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr21_+_38071430_38071456	0.0522433	AACACUG	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr18_+_29171689_29171847	0.0509835	AACACUG	ENST00000237014.3|TTR|ENSG00000118271.5|transthyretin
hg19_v2_chr2_-_100939195_100939195	0.0483273	AACACUG	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr17_-_17875688_17875736	0.048287	AACACUG	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chrX_+_118370211_118370222	0.0474914	AACACUG	ENST00000217971.7|PGRMC1|ENSG00000101856.8|progesterone receptor membrane component 1
hg19_v2_chr16_+_21610797_21610850	0.0471333	AACACUG	ENST00000358154.3|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr18_+_32558208_32558340	0.0465784	AACACUG	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chrX_+_40944871_40944888	0.0460958	AACACUG	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr9_+_110045537_110045572	0.045364	AACACUG	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr13_-_73356009_73356074	0.0442843	AACACUG	ENST00000377780.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae) 	ENST00000377767.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae)
hg19_v2_chr12_-_54673871_54673925	0.0422484	AACACUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr3_-_58419537_58419584	0.0422011	AACACUG	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr4_+_699537_699600	0.0416609	AACACUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr16_-_30798492_30798535	0.0415769	AACACUG	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr1_+_36621529_36621585	0.0415095	AACACUG	ENST00000316156.4|MAP7D1|ENSG00000116871.11|MAP7 domain containing 1
hg19_v2_chr2_+_113403434_113403496	0.0409017	AACACUG	ENST00000272542.3|SLC20A1|ENSG00000144136.6|solute carrier family 20 (phosphate transporter), member 1
hg19_v2_chr10_+_111767720_111767752	0.039721	AACACUG	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr1_+_24742264_24742312	0.0381409	AACACUG	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr22_+_46731596_46731658	0.0378881	AACACUG	ENST00000381019.3|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chr2_+_71558858_71558936	0.0378267	AACACUG	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr2_-_167232484_167232503	0.0377079	AACACUG	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr9_+_112810878_112810985	0.0368426	AACACUG	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr10_+_76586348_76586400	0.0360859	AACACUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr1_+_118148556_118148681	0.0360535	AACACUG	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr2_-_131850951_131851065	0.0357471	AACACUG	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr1_+_40723779_40723828	0.0353876	AACACUG	ENST00000372759.3|ZMPSTE24|ENSG00000084073.4|zinc metallopeptidase STE24
hg19_v2_chr11_+_36589547_36589575	0.0345758	AACACUG	ENST00000299440.5|RAG1|ENSG00000166349.5|recombination activating gene 1
hg19_v2_chr3_+_113465866_113465925	0.0332889	AACACUG	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr22_-_22221900_22221970	0.032582	AACACUG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr12_-_46766577_46766650	0.0320939	AACACUG	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr5_+_179125907_179126038	0.0311555	AACACUG	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr6_-_18265050_18265072	0.0307027	AACACUG	ENST00000397239.3|DEK|ENSG00000124795.10|DEK oncogene
hg19_v2_chr19_+_7968728_7968781	0.0298248	AACACUG	ENST00000397981.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000545011.1|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397983.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397979.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7
hg19_v2_chr1_+_29063271_29063283	0.029289	AACACUG	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr1_-_23670817_23670829	0.0289821	AACACUG	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr11_+_114270752_114270856	0.0289266	AACACUG	ENST00000540163.1|RBM7|ENSG00000076053.6|RNA binding motif protein 7
hg19_v2_chr1_+_82266053_82266082	0.0284957	AACACUG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr17_+_61086917_61086921	0.0281919	AACACUG	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr9_-_138799070_138799284	0.0271328	AACACUG	ENST00000389532.4|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1 	ENST00000409386.3|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1
hg19_v2_chr9_+_112542572_112542590	0.0264985	AACACUG	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chrX_-_110038990_110038997	0.0253206	AACACUG	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr19_-_14117074_14117141	0.0252547	AACACUG	ENST00000588885.1|RFX1|ENSG00000132005.4|regulatory factor X, 1 (influences HLA class II expression) 	ENST00000254325.4|RFX1|ENSG00000132005.4|regulatory factor X, 1 (influences HLA class II expression)
hg19_v2_chr5_-_141704566_141704605	0.0237872	AACACUG	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr6_+_155054459_155054561	0.0234871	AACACUG	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr17_+_26989109_26989248	0.0230678	AACACUG	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr16_-_85045131_85045147	0.0229559	AACACUG	ENST00000313732.4|ZDHHC7|ENSG00000153786.8|zinc finger, DHHC-type containing 7
hg19_v2_chr20_+_1099233_1099315	0.0225588	AACACUG	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chr17_-_49198216_49198236	0.0215963	AACACUG	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr1_+_25757376_25757411	0.0197852	AACACUG	ENST00000399766.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000399763.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000374343.4|TMEM57|ENSG00000204178.5|transmembrane protein 57
hg19_v2_chr4_-_186125077_186125182	0.0191612	AACACUG	ENST00000458385.2|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000514798.1|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000296775.6|KIAA1430|ENSG00000164323.8|KIAA1430
hg19_v2_chr4_+_128886532_128886576	0.0181079	AACACUG	ENST00000444616.1|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29 	ENST00000388795.5|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29
hg19_v2_chr14_+_69865401_69865426	0.017984	AACACUG	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr19_+_48898132_48898132	0.017822	AACACUG	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr7_-_79082867_79082900	0.0175127	AACACUG	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr19_+_50432400_50432479	0.0162765	AACACUG	ENST00000423777.2|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000600336.1|ATF5|ENSG00000169136.4|activating transcription factor 5 	ENST00000597227.1|ATF5|ENSG00000169136.4|activating transcription factor 5
hg19_v2_chr3_-_113160334_113160457	0.0159726	AACACUG	ENST00000393845.2|WDR52|ENSG00000206530.4|WD repeat domain 52 	ENST00000295868.2|WDR52|ENSG00000206530.4|WD repeat domain 52
hg19_v2_chr6_+_64281906_64281922	0.0158244	AACACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr17_+_53342311_53342400	0.01581	AACACUG	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr7_+_35840542_35840671	0.0157513	AACACUG	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr17_-_19771216_19771230	0.0146108	AACACUG	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr14_-_38064198_38064239	0.0138777	AACACUG	ENST00000250448.2|FOXA1|ENSG00000129514.4|forkhead box A1
hg19_v2_chr17_-_74137374_74137385	0.013602	AACACUG	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr14_-_57735528_57735726	0.0129391	AACACUG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr11_-_3013603_3013621	0.0129279	AACACUG	ENST00000380542.4|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4 	ENST00000526115.1|NAP1L4|ENSG00000205531.8|nucleosome assembly protein 1-like 4
hg19_v2_chr7_-_11871815_11871831	0.0109366	AACACUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr14_+_61201445_61201530	0.010819	AACACUG	ENST00000261245.4|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1 	ENST00000539616.2|MNAT1|ENSG00000020426.6|MNAT CDK-activating kinase assembly factor 1
hg19_v2_chr17_+_46985731_46985777	0.0106442	AACACUG	ENST00000360943.5|UBE2Z|ENSG00000159202.13|ubiquitin-conjugating enzyme E2Z
hg19_v2_chr17_-_58042075_58042135	0.0105668	AACACUG	ENST00000305783.8|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000589113.1|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1 	ENST00000442346.2|RNFT1|ENSG00000189050.10|ring finger protein, transmembrane 1
hg19_v2_chr11_+_45825896_45825965	0.010488	AACACUG	ENST00000314134.3|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr17_+_49230897_49231026	0.0104734	AACACUG	ENST00000393196.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393198.3|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000336097.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000480143.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000511355.1|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1 	ENST00000393193.2|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000376392.6|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000608447.1|NME1-NME2|ENSG00000243678.7|NME1-NME2 readthrough 	ENST00000555572.1|NME2|ENSG00000011052.17|NME/NM23 nucleoside diphosphate kinase 2 	ENST00000013034.3|NME1|ENSG00000239672.3|NME/NM23 nucleoside diphosphate kinase 1
hg19_v2_chr1_-_211752073_211752084	0.0104541	AACACUG	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr13_+_98605902_98605968	0.0103964	AACACUG	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr17_-_78450398_78450413	0.0103493	AACACUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr18_+_43304092_43304121	0.00915935	AACACUG	ENST00000321925.4|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 	ENST00000587601.1|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v2_chr1_-_28969517_28969605	0.00904198	AACACUG	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr16_+_30669720_30669771	0.00819113	AACACUG	ENST00000356166.6|FBRS|ENSG00000156860.11|fibrosin
hg19_v2_chr15_+_69591235_69591299	0.00817904	AACACUG	ENST00000395407.2|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V 	ENST00000558684.1|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V
hg19_v2_chr1_+_95582881_95582995	0.00803239	AACACUG	ENST00000370203.4|TMEM56|ENSG00000152078.5|transmembrane protein 56 	ENST00000456991.1|TMEM56|ENSG00000152078.5|transmembrane protein 56
hg19_v2_chr13_-_50367057_50367142	0.00733416	AACACUG	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr8_+_30013813_30013872	0.00718181	AACACUG	ENST00000221114.3|DCTN6|ENSG00000104671.3|dynactin 6
hg19_v2_chr21_-_36260980_36261011	0.00627273	AACACUG	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr14_+_60558627_60558738	0.00614058	AACACUG	ENST00000317623.4|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000391611.2|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406854.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406949.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila)
hg19_v2_chr7_+_100136811_100136882	0.00612935	AACACUG	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr3_-_56502375_56502428	0.0053446	AACACUG	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr9_+_131843377_131843413	0.0051004	AACACUG	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr11_+_33563821_33563877	0.0049843	AACACUG	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr12_+_14518598_14518663	0.00467584	AACACUG	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr19_-_10614386_10614417	0.00424936	AACACUG	ENST00000171111.5|KEAP1|ENSG00000079999.9|kelch-like ECH-associated protein 1
hg19_v2_chr5_+_138629417_138629467	0.00411899	AACACUG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr11_-_118550375_118550407	0.00366205	AACACUG	ENST00000525958.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000264029.4|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000397925.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein) 	ENST00000529101.1|TREH|ENSG00000118094.7|trehalase (brush-border membrane glycoprotein)
hg19_v2_chr6_-_132834184_132834337	0.00304809	AACACUG	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr9_+_72873837_72873937	0.00301922	AACACUG	ENST00000361138.5|SMC5|ENSG00000198887.7|structural maintenance of chromosomes 5
hg19_v2_chr5_-_95297678_95297775	0.0029954	AACACUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr13_-_79177673_79177701	0.00293295	AACACUG	ENST00000377208.5|POU4F1|ENSG00000152192.6|POU class 4 homeobox 1
hg19_v2_chrX_-_122866874_122866911	0.0027694	AACACUG	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr20_-_524455_524466	0.002384	AACACUG	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr18_+_60382672_60382701	0.00238339	AACACUG	ENST00000400316.4|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1 	ENST00000262719.5|PHLPP1|ENSG00000081913.9|PH domain and leucine rich repeat protein phosphatase 1
hg19_v2_chr7_+_107220422_107220468	0.00215228	AACACUG	ENST00000005259.4|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr1_+_181452678_181452716	0.00103497	AACACUG	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr12_-_109125285_109125372	0.0010306	AACACUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr1_-_175712829_175712906	0.00066247	AACACUG	ENST00000367674.2|TNR|ENSG00000116147.12|tenascin R
hg19_v2_chr1_-_57889687_57889754	4.12298e-05	AACACUG	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
