hg19_v2_chr1_+_214161272_214161322	0.296544	ACUGCAU	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr7_-_122526799_122526818	0.206306	ACUGCAU	ENST00000334010.7|CADPS2|ENSG00000081803.11|Ca++-dependent secretion activator 2 	ENST00000313070.7|CADPS2|ENSG00000081803.11|Ca++-dependent secretion activator 2
hg19_v2_chr7_-_111846435_111846471	0.15008	ACUGCAU	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr13_+_58206655_58206655	0.149016	ACUGCAU	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr2_+_235860616_235860645	0.146271	ACUGCAU	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chr12_-_31479045_31479074	0.135752	ACUGCAU	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr13_+_27131887_27131899	0.134	ACUGCAU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr13_-_72441315_72441454	0.131315	ACUGCAU	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr2_+_118846008_118846100	0.129205	ACUGCAU	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr3_+_173116225_173116242	0.124615	ACUGCAU	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr5_+_112312416_112312440	0.122946	ACUGCAU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr22_-_29075853_29075853	0.121904	ACUGCAU	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr7_-_44924939_44924993	0.118471	ACUGCAU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr3_-_114790179_114790222	0.117726	ACUGCAU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr17_+_58677539_58677610	0.117348	ACUGCAU	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr20_-_50384864_50384943	0.110354	ACUGCAU	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr4_-_23891693_23891706	0.0998797	ACUGCAU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr6_-_45345597_45345721	0.0920926	ACUGCAU	ENST00000371460.1|SUPT3H|ENSG00000196284.9|suppressor of Ty 3 homolog (S. cerevisiae) 	ENST00000371459.1|SUPT3H|ENSG00000196284.9|suppressor of Ty 3 homolog (S. cerevisiae)
hg19_v2_chr20_-_4982132_4982164	0.0907466	ACUGCAU	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr3_+_40351169_40351206	0.0851563	ACUGCAU	ENST00000232905.3|EIF1B|ENSG00000114784.3|eukaryotic translation initiation factor 1B
hg19_v2_chr1_-_169455169_169455241	0.0761492	ACUGCAU	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr2_-_24149977_24150007	0.0759178	ACUGCAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr3_-_79068594_79068627	0.0729418	ACUGCAU	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr7_+_29234028_29234043	0.0677559	ACUGCAU	ENST00000222792.6|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr20_-_44991813_44991887	0.060819	ACUGCAU	ENST00000372227.1|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2
hg19_v2_chr17_+_41052808_41052826	0.0593605	ACUGCAU	ENST00000592383.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000253801.2|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000585489.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit
hg19_v2_chr1_+_93544791_93544807	0.0576118	ACUGCAU	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr6_-_52926539_52926668	0.0568002	ACUGCAU	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr12_-_110939870_110939937	0.0551671	ACUGCAU	ENST00000447578.2|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000546588.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000360579.7|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000549970.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae) 	ENST00000549578.1|VPS29|ENSG00000111237.14|vacuolar protein sorting 29 homolog (S. cerevisiae)
hg19_v2_chr8_+_38614807_38614851	0.0547809	ACUGCAU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr10_-_98346801_98346812	0.0527187	ACUGCAU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr1_-_225840747_225840860	0.0497088	ACUGCAU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr16_+_12995468_12995497	0.0496772	ACUGCAU	ENST00000424107.3|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558583.1|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558318.1|SHISA9|ENSG00000237515.6|shisa family member 9
hg19_v2_chr2_+_109335929_109336002	0.0471007	ACUGCAU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr6_+_64281906_64281922	0.0442268	ACUGCAU	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr17_-_18266797_18266817	0.0432283	ACUGCAU	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr16_-_66785699_66785759	0.0431507	ACUGCAU	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr17_-_60142609_60142657	0.0430578	ACUGCAU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr22_-_22307199_22307242	0.0419449	ACUGCAU	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr5_+_36876833_36876894	0.0395855	ACUGCAU	ENST00000282516.8|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila) 	ENST00000448238.2|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila)
hg19_v2_chr3_+_186501336_186501386	0.0386372	ACUGCAU	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr6_-_99797522_99797572	0.0366236	ACUGCAU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr5_-_137911049_137911133	0.0346043	ACUGCAU	ENST00000297185.3|HSPA9|ENSG00000113013.8|heat shock 70kDa protein 9 (mortalin)
hg19_v2_chr17_-_44896047_44896126	0.0338836	ACUGCAU	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr5_-_168006591_168006638	0.0317309	ACUGCAU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr18_-_74207146_74207183	0.0301567	ACUGCAU	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr18_+_55102917_55102985	0.029828	ACUGCAU	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr3_+_180630090_180630311	0.0297835	ACUGCAU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chrX_+_9983602_9983602	0.027967	ACUGCAU	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr12_-_76478686_76478813	0.0259039	ACUGCAU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr11_+_125462690_125462768	0.0254403	ACUGCAU	ENST00000392708.4|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000529196.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic) 	ENST00000531491.1|STT3A|ENSG00000134910.8|STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr12_-_42538657_42538720	0.0252913	ACUGCAU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr14_+_100705322_100705360	0.0248052	ACUGCAU	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr10_+_114709999_114710031	0.0240955	ACUGCAU	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr6_+_163835669_163835693	0.0232231	ACUGCAU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr11_+_111473108_111473226	0.0217822	ACUGCAU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr5_-_78809950_78810040	0.0213856	ACUGCAU	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr13_-_30424821_30424847	0.0213656	ACUGCAU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr11_-_67980744_67980882	0.0212663	ACUGCAU	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr6_+_126112001_126112062	0.0211906	ACUGCAU	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr13_+_42622781_42622889	0.0205596	ACUGCAU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr10_+_69644404_69644427	0.0204958	ACUGCAU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr9_-_74980113_74980163	0.0201549	ACUGCAU	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr2_+_178077477_178077525	0.0199683	ACUGCAU	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr1_+_27022485_27022543	0.0198887	ACUGCAU	ENST00000324856.7|ARID1A|ENSG00000117713.13|AT rich interactive domain 1A (SWI-like)
hg19_v2_chr6_-_166796461_166796496	0.0195058	ACUGCAU	ENST00000360961.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1 	ENST00000341756.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1
hg19_v2_chr10_+_89622870_89622870	0.0192254	ACUGCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr15_+_44829255_44829331	0.0190055	ACUGCAU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr20_-_48099182_48099214	0.0189955	ACUGCAU	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr20_+_3451650_3451729	0.0187874	ACUGCAU	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr17_+_60536002_60536040	0.0185133	ACUGCAU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr6_+_119215308_119215391	0.0184834	ACUGCAU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr3_-_167813672_167813763	0.0177571	ACUGCAU	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr11_+_107461948_107462009	0.0176342	ACUGCAU	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr9_-_127703333_127703398	0.0169858	ACUGCAU	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr9_-_15510989_15511017	0.0168303	ACUGCAU	ENST00000380715.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380716.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380738.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380733.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr17_-_58603568_58603610	0.0166928	ACUGCAU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr5_-_130970723_130970965	0.0166149	ACUGCAU	ENST00000308008.6|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000296859.6|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000507093.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000510071.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000509018.1|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6 	ENST00000307984.5|RAPGEF6|ENSG00000158987.15|Rap guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr20_+_1099233_1099315	0.0158213	ACUGCAU	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chr3_+_30648066_30648167	0.0157608	ACUGCAU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr13_-_53422640_53422780	0.015273	ACUGCAU	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr4_+_57774042_57774114	0.0138256	ACUGCAU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr8_-_103876965_103877012	0.0137598	ACUGCAU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr1_-_70671216_70671303	0.0133895	ACUGCAU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr1_-_244615425_244615441	0.0122472	ACUGCAU	ENST00000366535.3|ADSS|ENSG00000035687.9|adenylosuccinate synthase
hg19_v2_chr2_+_9346892_9346948	0.0111329	ACUGCAU	ENST00000281419.3|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENST00000315273.4|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
hg19_v2_chr1_+_229406847_229406935	0.011104	ACUGCAU	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chrX_+_70316005_70316047	0.0109007	ACUGCAU	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chr19_-_47616992_47617011	0.0104942	ACUGCAU	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr13_+_33160553_33160564	0.0101055	ACUGCAU	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr2_-_86564776_86564813	0.0100962	ACUGCAU	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr16_+_56965960_56966072	0.0096975	ACUGCAU	ENST00000439977.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000344114.4|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000300302.5|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000379792.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr16_+_7382745_7382769	0.00957504	ACUGCAU	ENST00000436368.2|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000311745.5|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000355637.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000340209.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr10_-_27443155_27443288	0.00935846	ACUGCAU	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr20_+_62496596_62496655	0.0092947	ACUGCAU	ENST00000369927.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000346249.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000348257.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000352482.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000351424.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000217121.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000358548.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2
hg19_v2_chr2_+_169312350_169312372	0.00925983	ACUGCAU	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr5_+_137801160_137801179	0.00924478	ACUGCAU	ENST00000239938.4|EGR1|ENSG00000120738.7|early growth response 1
hg19_v2_chr15_+_57210818_57210930	0.00881298	ACUGCAU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr4_-_42659102_42659161	0.00850594	ACUGCAU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr2_+_99953816_99953894	0.00835899	ACUGCAU	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr10_+_104678032_104678094	0.00780421	ACUGCAU	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr17_+_30264014_30264086	0.00680442	ACUGCAU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chrX_-_131352152_131352204	0.00672911	ACUGCAU	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr17_+_29421900_29421951	0.00657425	ACUGCAU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr3_+_196594727_196594816	0.00648769	ACUGCAU	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr1_+_151584544_151584558	0.00601268	ACUGCAU	ENST00000458013.2|SNX27|ENSG00000143376.8|sorting nexin family member 27 	ENST00000368843.3|SNX27|ENSG00000143376.8|sorting nexin family member 27
hg19_v2_chr5_-_131132658_131132719	0.0060008	ACUGCAU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr4_-_66536057_66536071	0.00587608	ACUGCAU	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr3_-_21792838_21792927	0.00549022	ACUGCAU	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr6_-_79944336_79944440	0.00508546	ACUGCAU	ENST00000344726.5|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3 	ENST00000275036.7|HMGN3|ENSG00000118418.10|high mobility group nucleosomal binding domain 3
hg19_v2_chr3_-_101232019_101232085	0.0050719	ACUGCAU	ENST00000394095.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394091.1|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000394094.2|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000358203.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000348610.3|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7 	ENST00000314261.7|SENP7|ENSG00000138468.11|SUMO1/sentrin specific peptidase 7
hg19_v2_chr1_-_57889687_57889754	0.00407014	ACUGCAU	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr8_-_29940628_29940723	0.00348165	ACUGCAU	ENST00000545648.1|TMEM66|ENSG00000133872.9|transmembrane protein 66 	ENST00000256255.6|TMEM66|ENSG00000133872.9|transmembrane protein 66
hg19_v2_chr2_+_166095898_166095940	0.00340412	ACUGCAU	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr2_-_74570520_74570547	0.00323577	ACUGCAU	ENST00000394019.2|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000346834.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000359484.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000423644.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000377634.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000436454.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5
hg19_v2_chr19_+_41768401_41768437	0.00282303	ACUGCAU	ENST00000352456.3|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000595018.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000597725.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v2_chr12_-_92539614_92539673	0.00281512	ACUGCAU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr9_+_33025209_33025279	0.00256522	ACUGCAU	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr9_+_129677039_129677119	0.0025358	ACUGCAU	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr1_-_24306798_24306828	0.00218636	ACUGCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr8_+_1449532_1449532	0.00191613	ACUGCAU	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr15_+_41709302_41709348	0.00190981	ACUGCAU	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr1_-_233431458_233431489	0.00168435	ACUGCAU	ENST00000258229.9|PCNXL2|ENSG00000135749.14|pecanex-like 2 (Drosophila) 	ENST00000430153.1|PCNXL2|ENSG00000135749.14|pecanex-like 2 (Drosophila)
hg19_v2_chr2_-_69870835_69870853	0.00168165	ACUGCAU	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chrX_+_118108571_118108589	0.00150348	ACUGCAU	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr16_-_53737795_53737850	0.00148754	ACUGCAU	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr2_+_148602058_148602185	0.00132371	ACUGCAU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr4_+_144257915_144258009	0.00107996	ACUGCAU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_+_108881012_108881038	0.0010099	ACUGCAU	ENST00000343882.6|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr1_+_244816237_244816357	0.00100812	ACUGCAU	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr3_-_48342795_48342913	0.000863249	ACUGCAU	ENST00000452211.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000447724.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000415053.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000425930.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000421967.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000426723.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000450160.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000456495.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000435684.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000447314.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000415644.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6 	ENST00000442597.1|NME6|ENSG00000172113.4|NME/NM23 nucleoside diphosphate kinase 6
hg19_v2_chr3_+_11314099_11314122	0.000588555	ACUGCAU	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr3_+_113465866_113465925	0.000145961	ACUGCAU	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
