hg19_v2_chr10_-_99094458_99094500	0.725916	AGCUGCC	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr16_+_66400533_66400545	0.717941	AGCUGCC	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr10_+_5454505_5454540	0.715853	AGCUGCC	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr12_+_93771659_93771710	0.677906	AGCUGCC	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr11_-_75062730_75062775	0.641341	AGCUGCC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr14_+_103058948_103059005	0.568303	AGCUGCC	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr7_-_11871815_11871831	0.53601	AGCUGCC	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chrX_+_131157290_131157309	0.516068	AGCUGCC	ENST00000394334.2|MST4|ENSG00000134602.11|Serine/threonine-protein kinase MST4
hg19_v2_chr8_+_61591337_61591393	0.501597	AGCUGCC	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr1_-_63988846_63988908	0.499737	AGCUGCC	ENST00000283568.8|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000371092.3|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin) 	ENST00000271002.10|ITGB3BP|ENSG00000142856.12|integrin beta 3 binding protein (beta3-endonexin)
hg19_v2_chr7_-_16505440_16505474	0.499599	AGCUGCC	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr22_-_22221900_22221970	0.49184	AGCUGCC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr1_+_12227035_12227060	0.488569	AGCUGCC	ENST00000376259.3|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B 	ENST00000536782.1|TNFRSF1B|ENSG00000028137.12|tumor necrosis factor receptor superfamily, member 1B
hg19_v2_chr3_-_50649192_50649262	0.469599	AGCUGCC	ENST00000443053.2|CISH|ENSG00000114737.11|cytokine inducible SH2-containing protein 	ENST00000348721.3|CISH|ENSG00000114737.11|cytokine inducible SH2-containing protein
hg19_v2_chrX_+_109246285_109246352	0.455387	AGCUGCC	ENST00000372073.1|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000372068.2|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000288381.4|TMEM164|ENSG00000157600.7|transmembrane protein 164
hg19_v2_chr1_-_39339777_39339777	0.441426	AGCUGCC	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr8_-_130951940_130952118	0.438658	AGCUGCC	ENST00000522250.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522941.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522746.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520204.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519070.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520254.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519824.2|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519540.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B
hg19_v2_chr17_-_47841485_47841529	0.436258	AGCUGCC	ENST00000506156.1|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A 	ENST00000240364.2|FAM117A|ENSG00000121104.3|family with sequence similarity 117, member A
hg19_v2_chr1_+_2985760_2985775	0.436157	AGCUGCC	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr15_-_37390482_37390572	0.415189	AGCUGCC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr1_+_93544791_93544807	0.394759	AGCUGCC	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr8_+_98656336_98656535	0.383925	AGCUGCC	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr2_-_200322723_200322819	0.379233	AGCUGCC	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr15_-_74988281_74988392	0.367435	AGCUGCC	ENST00000566828.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000563009.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000568176.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566243.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566219.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000426797.3|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566119.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000315127.4|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3
hg19_v2_chr2_+_208394616_208394655	0.358468	AGCUGCC	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr1_-_114355083_114355123	0.354216	AGCUGCC	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr14_+_33408449_33408525	0.345156	AGCUGCC	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr6_+_35995488_35995528	0.344834	AGCUGCC	ENST00000229795.3|MAPK14|ENSG00000112062.6|mitogen-activated protein kinase 14
hg19_v2_chr9_-_101471479_101471522	0.339772	AGCUGCC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chrX_+_123095155_123095179	0.337519	AGCUGCC	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr12_-_31945172_31945178	0.33437	AGCUGCC	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr3_+_43328004_43328095	0.333815	AGCUGCC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr6_+_96463840_96463892	0.329442	AGCUGCC	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr10_+_26986582_26986640	0.326318	AGCUGCC	ENST00000376215.5|PDSS1|ENSG00000148459.11|prenyl (decaprenyl) diphosphate synthase, subunit 1 	ENST00000376203.5|PDSS1|ENSG00000148459.11|prenyl (decaprenyl) diphosphate synthase, subunit 1
hg19_v2_chr12_+_85673868_85673885	0.317983	AGCUGCC	ENST00000316824.3|ALX1|ENSG00000180318.3|ALX homeobox 1
hg19_v2_chr19_+_19303008_19303083	0.307617	AGCUGCC	ENST00000353145.1|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000421262.3|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000303088.4|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000456252.3|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000593273.1|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein
hg19_v2_chr12_+_93965451_93965494	0.301476	AGCUGCC	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr6_+_15246501_15246527	0.300375	AGCUGCC	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr5_-_78809950_78810040	0.288191	AGCUGCC	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr5_+_177540444_177540506	0.282057	AGCUGCC	ENST00000274605.5|N4BP3|ENSG00000145911.5|NEDD4 binding protein 3
hg19_v2_chr17_+_38333263_38333368	0.281771	AGCUGCC	ENST00000456989.2|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000543876.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000544503.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000264644.6|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1 	ENST00000538884.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1
hg19_v2_chr6_+_24495067_24495096	0.269592	AGCUGCC	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr15_+_41851211_41851232	0.268092	AGCUGCC	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr2_-_25475120_25475180	0.267442	AGCUGCC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr3_-_57199397_57199432	0.25666	AGCUGCC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr11_-_88796803_88796827	0.253852	AGCUGCC	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr6_+_152011628_152011642	0.25162	AGCUGCC	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr12_+_52306113_52306194	0.250119	AGCUGCC	ENST00000547400.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000550683.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000419526.2|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1
hg19_v2_chr19_-_46234119_46234189	0.247376	AGCUGCC	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chr3_-_194393206_194393206	0.244971	AGCUGCC	ENST00000265245.5|LSG1|ENSG00000041802.6|large 60S subunit nuclear export GTPase 1
hg19_v2_chr1_-_15911510_15911605	0.243525	AGCUGCC	ENST00000375826.3|AGMAT|ENSG00000116771.5|agmatine ureohydrolase (agmatinase)
hg19_v2_chr22_+_40573921_40573946	0.23978	AGCUGCC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr7_-_14029515_14029642	0.234584	AGCUGCC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr14_-_57735528_57735726	0.226967	AGCUGCC	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr20_-_48330377_48330441	0.221862	AGCUGCC	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chr16_-_87525651_87525651	0.219961	AGCUGCC	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr22_+_26879817_26879896	0.217818	AGCUGCC	ENST00000215917.7|SRRD|ENSG00000100104.8|SRR1 domain containing
hg19_v2_chr5_-_177580777_177580830	0.216927	AGCUGCC	ENST00000314397.4|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr1_+_36348790_36348822	0.206748	AGCUGCC	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr8_-_101965146_101965236	0.205753	AGCUGCC	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr5_+_139781445_139781506	0.204812	AGCUGCC	ENST00000532219.1|ANKHD1-EIF4EBP3|ENSG00000254996.1|ANKHD1-EIF4EBP3 readthrough 	ENST00000394722.3|ANKHD1|ENSG00000131503.16|ankyrin repeat and KH domain containing 1
hg19_v2_chr12_-_57400227_57400245	0.204294	AGCUGCC	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr15_-_83316254_83316368	0.204173	AGCUGCC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr17_-_74449252_74449294	0.201821	AGCUGCC	ENST00000319380.7|UBE2O|ENSG00000175931.8|ubiquitin-conjugating enzyme E2O
hg19_v2_chr22_+_31031639_31031804	0.201359	AGCUGCC	ENST00000343605.4|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4 	ENST00000300385.8|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4
hg19_v2_chr12_+_48166978_48167047	0.198377	AGCUGCC	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr6_+_117996621_117996665	0.197805	AGCUGCC	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr21_-_34852304_34852318	0.195777	AGCUGCC	ENST00000542230.2|TMEM50B|ENSG00000142188.12|transmembrane protein 50B
hg19_v2_chr1_+_114472222_114472377	0.194732	AGCUGCC	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr1_-_115259337_115259515	0.191575	AGCUGCC	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr1_-_11863171_11863302	0.190954	AGCUGCC	ENST00000376592.1|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr9_-_14314066_14314075	0.1898	AGCUGCC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr2_-_43453734_43453751	0.188372	AGCUGCC	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr12_+_53774423_53774658	0.187851	AGCUGCC	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr9_-_117568365_117568406	0.185001	AGCUGCC	ENST00000374045.4|TNFSF15|ENSG00000181634.7|tumor necrosis factor (ligand) superfamily, member 15
hg19_v2_chrX_-_108868390_108868407	0.183669	AGCUGCC	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr11_+_119076745_119076792	0.178776	AGCUGCC	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr15_+_52121822_52121833	0.175863	AGCUGCC	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr1_-_222885770_222885866	0.172336	AGCUGCC	ENST00000355727.2|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated 	ENST00000340020.6|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated
hg19_v2_chr14_+_70078303_70078321	0.171232	AGCUGCC	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr5_+_176784837_176784936	0.170395	AGCUGCC	ENST00000408923.3|RGS14|ENSG00000169220.13|regulator of G-protein signaling 14
hg19_v2_chr1_-_8938736_8938756	0.167464	AGCUGCC	ENST00000234590.4|ENO1|ENSG00000074800.9|enolase 1, (alpha)
hg19_v2_chr1_-_175161890_175161929	0.165911	AGCUGCC	ENST00000545251.2|KIAA0040|ENSG00000235750.5|KIAA0040 	ENST00000423313.1|KIAA0040|ENSG00000235750.5|KIAA0040
hg19_v2_chr19_+_34745442_34745502	0.164326	AGCUGCC	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr3_+_11034403_11034492	0.163798	AGCUGCC	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr5_-_175964366_175964429	0.160709	AGCUGCC	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr1_-_35325400_35325431	0.157104	AGCUGCC	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr4_+_17616253_17616275	0.157023	AGCUGCC	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr10_-_13390270_13390316	0.152793	AGCUGCC	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr7_+_39989611_39989716	0.152564	AGCUGCC	ENST00000181839.4|CDK13|ENSG00000065883.10|cyclin-dependent kinase 13
hg19_v2_chr1_+_24882560_24882620	0.152097	AGCUGCC	ENST00000374392.2|NCMAP|ENSG00000184454.6|noncompact myelin associated protein
hg19_v2_chr12_-_93835665_93835750	0.151402	AGCUGCC	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr10_+_89622870_89622870	0.151077	AGCUGCC	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr1_+_63788730_63788730	0.150478	AGCUGCC	ENST00000371116.2|FOXD3|ENSG00000187140.4|forkhead box D3
hg19_v2_chr11_+_64948665_64948748	0.145777	AGCUGCC	ENST00000533820.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr3_-_135914615_135914701	0.145562	AGCUGCC	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr1_-_70671216_70671303	0.141733	AGCUGCC	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr11_+_113930291_113930339	0.140672	AGCUGCC	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr7_+_20370746_20370778	0.13972	AGCUGCC	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr4_-_39979576_39979588	0.138509	AGCUGCC	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr20_-_30795511_30795594	0.134707	AGCUGCC	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr4_-_53525406_53525502	0.131946	AGCUGCC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr14_+_55738021_55738176	0.129312	AGCUGCC	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr1_-_169863016_169863109	0.125081	AGCUGCC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr4_+_41937131_41937211	0.12488	AGCUGCC	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr6_-_24721054_24721074	0.124408	AGCUGCC	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr1_+_35734562_35734573	0.124255	AGCUGCC	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr22_-_47134077_47134216	0.123807	AGCUGCC	ENST00000541677.1|CERK|ENSG00000100422.9|ceramide kinase 	ENST00000216264.8|CERK|ENSG00000100422.9|ceramide kinase
hg19_v2_chr8_+_17354587_17354610	0.123605	AGCUGCC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr7_-_44924939_44924993	0.12202	AGCUGCC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr14_+_77228532_77228672	0.121699	AGCUGCC	ENST00000167106.4|VASH1|ENSG00000071246.6|vasohibin 1 	ENST00000554237.1|VASH1|ENSG00000071246.6|vasohibin 1
hg19_v2_chr20_+_33814457_33814506	0.120892	AGCUGCC	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr1_-_39347255_39347303	0.120872	AGCUGCC	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chrX_-_153363188_153363212	0.119947	AGCUGCC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr3_-_197476560_197476577	0.11905	AGCUGCC	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr2_-_225450013_225450068	0.117748	AGCUGCC	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr11_+_65479462_65479517	0.115163	AGCUGCC	ENST00000377046.3|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000352980.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000341318.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5
hg19_v2_chr2_+_226265364_226265364	0.110782	AGCUGCC	ENST00000272907.6|NYAP2|ENSG00000144460.10|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
hg19_v2_chr1_-_86174065_86174134	0.11053	AGCUGCC	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr1_+_28696111_28696130	0.110173	AGCUGCC	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr22_-_39268308_39268319	0.105369	AGCUGCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr3_-_52312636_52312673	0.104723	AGCUGCC	ENST00000296490.3|WDR82|ENSG00000164091.7|WD repeat domain 82
hg19_v2_chr11_-_31839488_31839515	0.104242	AGCUGCC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr3_+_101292939_101293063	0.102813	AGCUGCC	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr10_+_69644404_69644427	0.102347	AGCUGCC	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr7_-_93204033_93204043	0.102253	AGCUGCC	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr12_-_86230315_86230348	0.101594	AGCUGCC	ENST00000361228.3|RASSF9|ENSG00000198774.3|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
hg19_v2_chr3_+_152879985_152880038	0.101547	AGCUGCC	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr11_+_118307179_118307228	0.10055	AGCUGCC	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr12_+_103351444_103351464	0.0992846	AGCUGCC	ENST00000266744.3|ASCL1|ENSG00000139352.3|achaete-scute family bHLH transcription factor 1
hg19_v2_chr6_+_41040678_41040722	0.0992086	AGCUGCC	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr8_+_1449532_1449532	0.0979637	AGCUGCC	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr1_+_2160134_2160134	0.0968303	AGCUGCC	ENST00000378536.4|SKI|ENSG00000157933.9|v-ski avian sarcoma viral oncogene homolog
hg19_v2_chr17_-_40075219_40075275	0.0965167	AGCUGCC	ENST00000537919.1|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000352035.2|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000353196.1|ACLY|ENSG00000131473.12|ATP citrate lyase 	ENST00000393896.2|ACLY|ENSG00000131473.12|ATP citrate lyase
hg19_v2_chr20_+_48599506_48599536	0.0938007	AGCUGCC	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr4_+_40058411_40058557	0.0930829	AGCUGCC	ENST00000261435.6|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2 	ENST00000515550.1|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2
hg19_v2_chr1_-_89357179_89357301	0.0926603	AGCUGCC	ENST00000448623.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000418217.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000370500.5|GTF2B|ENSG00000137947.7|general transcription factor IIB
hg19_v2_chr1_+_45965725_45965880	0.0915932	AGCUGCC	ENST00000401061.4|MMACHC|ENSG00000132763.10|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
hg19_v2_chr20_+_49126881_49126936	0.0909249	AGCUGCC	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr2_+_12857015_12857041	0.090639	AGCUGCC	ENST00000155926.4|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chrX_+_108780062_108780105	0.0900913	AGCUGCC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr2_+_74425689_74425749	0.0899671	AGCUGCC	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr5_-_100238956_100238994	0.0894431	AGCUGCC	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr12_+_56401268_56401443	0.0884245	AGCUGCC	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr1_+_226736446_226736513	0.0878945	AGCUGCC	ENST00000366788.3|C1orf95|ENSG00000203685.5|chromosome 1 open reading frame 95 	ENST00000366789.4|C1orf95|ENSG00000203685.5|chromosome 1 open reading frame 95
hg19_v2_chr1_-_113249948_113250056	0.0871273	AGCUGCC	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr1_-_33502441_33502500	0.0856594	AGCUGCC	ENST00000548033.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000487289.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000373449.2|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000480134.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000467905.1|AK2|ENSG00000004455.12|adenylate kinase 2
hg19_v2_chr12_-_92539614_92539673	0.0853595	AGCUGCC	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr15_-_75871589_75871676	0.0850998	AGCUGCC	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr2_+_166326157_166326216	0.0831099	AGCUGCC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr11_-_72145669_72145692	0.0818567	AGCUGCC	ENST00000543042.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli) 	ENST00000294053.3|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr10_-_75634260_75634321	0.0801321	AGCUGCC	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr22_-_30662828_30662847	0.0795033	AGCUGCC	ENST00000403463.1|OSM|ENSG00000099985.3|oncostatin M 	ENST00000215781.2|OSM|ENSG00000099985.3|oncostatin M
hg19_v2_chr17_+_47653178_47653241	0.0784227	AGCUGCC	ENST00000328741.5|NXPH3|ENSG00000182575.7|neurexophilin 3
hg19_v2_chr1_+_214161272_214161322	0.0773113	AGCUGCC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr1_+_147013182_147013329	0.0768692	AGCUGCC	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr12_+_49372251_49372398	0.0768292	AGCUGCC	ENST00000293549.3|WNT1|ENSG00000125084.7|wingless-type MMTV integration site family, member 1
hg19_v2_chr15_-_73661605_73661605	0.0765454	AGCUGCC	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr19_+_49468558_49468567	0.0761704	AGCUGCC	ENST00000331825.6|FTL|ENSG00000087086.9|ferritin, light polypeptide
hg19_v2_chr3_-_49823941_49823990	0.0756235	AGCUGCC	ENST00000321599.4|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000395238.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000468463.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000460540.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1
hg19_v2_chr4_+_184020398_184020463	0.0732855	AGCUGCC	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr8_-_41909496_41909512	0.0721023	AGCUGCC	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr3_+_38495333_38495422	0.0717514	AGCUGCC	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr8_-_102217796_102217960	0.0698168	AGCUGCC	ENST00000519744.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000311212.4|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000521272.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000519882.1|ZNF706|ENSG00000120963.7|zinc finger protein 706
hg19_v2_chr10_+_72164135_72164135	0.0690926	AGCUGCC	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr2_+_232651124_232651176	0.0675049	AGCUGCC	ENST00000350033.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000412591.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000410017.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000373608.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B
hg19_v2_chr2_+_135676381_135676435	0.0668726	AGCUGCC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr1_+_159141397_159141549	0.0667584	AGCUGCC	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr4_-_42659102_42659161	0.0648638	AGCUGCC	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr5_-_159739532_159739607	0.0645415	AGCUGCC	ENST00000520748.1|CCNJL|ENSG00000135083.10|cyclin J-like 	ENST00000393977.3|CCNJL|ENSG00000135083.10|cyclin J-like 	ENST00000257536.7|CCNJL|ENSG00000135083.10|cyclin J-like
hg19_v2_chr1_+_16693578_16693760	0.063788	AGCUGCC	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr16_+_10971037_10971076	0.0621944	AGCUGCC	ENST00000324288.8|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator 	ENST00000381835.5|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator
hg19_v2_chr12_+_56367697_56367893	0.0614289	AGCUGCC	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr4_-_87281224_87281375	0.0609145	AGCUGCC	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr9_+_125133315_125133359	0.0603011	AGCUGCC	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr1_+_209757051_209757074	0.0596882	AGCUGCC	ENST00000009105.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000423146.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000361322.2|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG
hg19_v2_chr11_-_82611448_82611639	0.0583724	AGCUGCC	ENST00000393399.2|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C) 	ENST00000313010.3|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C)
hg19_v2_chr4_-_89205879_89205921	0.0570646	AGCUGCC	ENST00000608933.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000315194.4|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000514204.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K
hg19_v2_chr17_-_61850894_61851135	0.0567095	AGCUGCC	ENST00000403162.3|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000582252.1|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000225726.5|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47
hg19_v2_chr11_+_65101225_65101359	0.0566583	AGCUGCC	ENST00000528416.1|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000415073.2|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000252268.4|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2
hg19_v2_chr5_+_149109825_149109907	0.0556403	AGCUGCC	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr17_+_35766965_35767030	0.0553917	AGCUGCC	ENST00000394395.2|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000589153.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000586023.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A
hg19_v2_chr7_+_128577972_128578047	0.0547894	AGCUGCC	ENST00000357234.5|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000477535.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000479582.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000464557.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000402030.2|IRF5|ENSG00000128604.14|interferon regulatory factor 5
hg19_v2_chr17_-_3749515_3749551	0.0538461	AGCUGCC	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr5_-_149492904_149492935	0.0519998	AGCUGCC	ENST00000286301.3|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor 	ENST00000511344.1|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor
hg19_v2_chr12_-_57443886_57443927	0.0513447	AGCUGCC	ENST00000300119.3|MYO1A|ENSG00000166866.8|myosin IA
hg19_v2_chr2_-_99552620_99552722	0.0497295	AGCUGCC	ENST00000428096.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000397899.2|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000420294.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like
hg19_v2_chr1_-_119683251_119683298	0.0489736	AGCUGCC	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr16_-_4292071_4292088	0.0487049	AGCUGCC	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr2_-_213403565_213403584	0.0478277	AGCUGCC	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr17_+_47865917_47866068	0.0449517	AGCUGCC	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr4_-_111119804_111119832	0.044207	AGCUGCC	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr20_-_3767324_3767443	0.043111	AGCUGCC	ENST00000379751.4|CENPB|ENSG00000125817.7|centromere protein B, 80kDa
hg19_v2_chr1_+_202091980_202091991	0.0408587	AGCUGCC	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chr15_+_68570062_68570147	0.0386021	AGCUGCC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr9_+_87284622_87284653	0.0381957	AGCUGCC	ENST00000395882.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr2_-_166651191_166651213	0.0380054	AGCUGCC	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr11_+_65339820_65340051	0.0379736	AGCUGCC	ENST00000316409.2|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B 	ENST00000449319.2|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B 	ENST00000530349.1|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B
hg19_v2_chr2_+_178077477_178077525	0.0352956	AGCUGCC	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr1_+_27561007_27561061	0.0343675	AGCUGCC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr19_+_46010674_46010772	0.0342097	AGCUGCC	ENST00000245932.6|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein 	ENST00000592139.1|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein 	ENST00000590603.1|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein
hg19_v2_chr17_-_73775839_73775868	0.034169	AGCUGCC	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr5_-_141257954_141258006	0.0340672	AGCUGCC	ENST00000456271.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000394536.3|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000503492.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000287008.3|PCDH1|ENSG00000156453.9|protocadherin 1
hg19_v2_chr4_-_85887503_85887544	0.0339426	AGCUGCC	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr16_+_24266874_24266917	0.0334707	AGCUGCC	ENST00000005284.3|CACNG3|ENSG00000006116.3|calcium channel, voltage-dependent, gamma subunit 3
hg19_v2_chr11_+_9406169_9406210	0.0303216	AGCUGCC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr17_+_38219063_38219154	0.0276111	AGCUGCC	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chrX_+_24483338_24483573	0.0268176	AGCUGCC	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
hg19_v2_chr1_+_171810606_171810649	0.026471	AGCUGCC	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr16_+_66878814_66878843	0.0253822	AGCUGCC	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr17_+_42836329_42836399	0.025236	AGCUGCC	ENST00000200557.6|ADAM11|ENSG00000073670.9|ADAM metallopeptidase domain 11
hg19_v2_chr12_+_52345448_52345532	0.0245358	AGCUGCC	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr14_-_78083112_78083140	0.0232458	AGCUGCC	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr17_+_60536002_60536040	0.0232044	AGCUGCC	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr11_-_47788847_47788919	0.0229048	AGCUGCC	ENST00000263773.5|FNBP4|ENSG00000109920.8|formin binding protein 4
hg19_v2_chr1_-_24306798_24306828	0.0219889	AGCUGCC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr1_-_36022979_36023014	0.0216177	AGCUGCC	ENST00000469892.1|KIAA0319L|ENSG00000142687.13|KIAA0319-like 	ENST00000325722.3|KIAA0319L|ENSG00000142687.13|KIAA0319-like
hg19_v2_chr19_-_344786_344826	0.0212116	AGCUGCC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr9_-_19786926_19786926	0.0197617	AGCUGCC	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr21_+_33245548_33245628	0.0188514	AGCUGCC	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr7_+_100797678_100797708	0.0184204	AGCUGCC	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr16_+_12995468_12995497	0.0175291	AGCUGCC	ENST00000424107.3|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558583.1|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558318.1|SHISA9|ENSG00000237515.6|shisa family member 9
hg19_v2_chr12_-_53893399_53893478	0.0173321	AGCUGCC	ENST00000267079.2|MAP3K12|ENSG00000139625.8|mitogen-activated protein kinase kinase kinase 12
hg19_v2_chr10_-_120514720_120514758	0.0171885	AGCUGCC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr10_-_88281494_88281572	0.0155571	AGCUGCC	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr16_+_30710462_30710498	0.01501	AGCUGCC	ENST00000262518.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000395059.2|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000344771.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein
hg19_v2_chr14_-_23288930_23289020	0.0149172	AGCUGCC	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr16_-_58663720_58663790	0.0148827	AGCUGCC	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr3_-_48885228_48885327	0.0142401	AGCUGCC	ENST00000454963.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000296446.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000419216.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000265563.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha
hg19_v2_chr1_-_183604794_183604908	0.0140001	AGCUGCC	ENST00000367534.1|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000359856.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000294742.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa
hg19_v2_chr11_+_117014983_117015017	0.0125239	AGCUGCC	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr4_-_104640973_104640973	0.0121105	AGCUGCC	ENST00000304883.2|TACR3|ENSG00000169836.4|tachykinin receptor 3
hg19_v2_chr12_+_8234807_8234855	0.00985917	AGCUGCC	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr6_+_71377473_71377520	0.0097638	AGCUGCC	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr7_+_31003621_31003641	0.00973242	AGCUGCC	ENST00000326139.2|GHRHR|ENSG00000106128.14|growth hormone releasing hormone receptor
hg19_v2_chr17_-_202579_202633	0.00872532	AGCUGCC	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr12_+_56211703_56211858	0.00864605	AGCUGCC	ENST00000243045.5|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000552672.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000550836.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae)
hg19_v2_chr1_+_183441600_183441616	0.00742583	AGCUGCC	ENST00000367537.3|SMG7|ENSG00000116698.16|SMG7 nonsense mediated mRNA decay factor
hg19_v2_chr17_+_54911444_54911564	0.00691532	AGCUGCC	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr2_-_71062938_71062952	0.00645261	AGCUGCC	ENST00000410009.3|CD207|ENSG00000116031.7|CD207 molecule, langerin
hg19_v2_chr10_-_105615164_105615323	0.00528098	AGCUGCC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr11_+_75110530_75110587	0.00246725	AGCUGCC	ENST00000531188.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000530164.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000422465.2|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000278572.6|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000534440.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000527446.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000526608.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000527273.1|RPS3|ENSG00000149273.10|ribosomal protein S3 	ENST00000524851.1|RPS3|ENSG00000149273.10|ribosomal protein S3
hg19_v2_chr13_-_28545276_28545276	0.000950237	AGCUGCC	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr2_-_175113301_175113426	0.000216688	AGCUGCC	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
