hg19_v2_chr7_+_94023873_94023873	4.00529	AGGUAGU	ENST00000297268.6|COL1A2|ENSG00000164692.13|collagen, type I, alpha 2
hg19_v2_chr2_+_189839046_189839105	3.296	AGGUAGU	ENST00000304636.3|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1 	ENST00000317840.5|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1
hg19_v2_chr17_-_46682321_46682362	2.00708	AGGUAGU	ENST00000225648.3|HOXB6|ENSG00000108511.8|homeobox B6 	ENST00000484302.2|HOXB6|ENSG00000108511.8|homeobox B6
hg19_v2_chr17_-_48278983_48278999	1.85668	AGGUAGU	ENST00000225964.5|COL1A1|ENSG00000108821.9|collagen, type I, alpha 1
hg19_v2_chr1_+_164528866_164528877	1.71242	AGGUAGU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr9_-_16870704_16870841	1.66935	AGGUAGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr17_-_46688334_46688385	1.54867	AGGUAGU	ENST00000239165.7|HOXB7|ENSG00000260027.3|homeobox B7
hg19_v2_chr17_+_68165657_68165688	1.49644	AGGUAGU	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr3_+_159557637_159557650	1.44863	AGGUAGU	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr3_+_158991025_158991083	1.32503	AGGUAGU	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr12_-_25102252_25102393	1.31884	AGGUAGU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chrX_+_134166333_134166371	1.09623	AGGUAGU	ENST00000257013.7|FAM127A|ENSG00000134590.9|family with sequence similarity 127, member A
hg19_v2_chr12_-_69326940_69326993	0.946755	AGGUAGU	ENST00000549781.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000548262.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000551568.1|CPM|ENSG00000135678.7|carboxypeptidase M 	ENST00000548954.1|CPM|ENSG00000135678.7|carboxypeptidase M
hg19_v2_chr3_+_110790590_110790603	0.908211	AGGUAGU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr3_+_61547585_61547585	0.863739	AGGUAGU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr14_-_88459503_88459615	0.853548	AGGUAGU	ENST00000393568.4|GALC|ENSG00000054983.12|galactosylceramidase 	ENST00000261304.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr9_+_132934835_132934857	0.804016	AGGUAGU	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chrX_-_134186144_134186228	0.793456	AGGUAGU	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr7_-_27196267_27196311	0.750545	AGGUAGU	ENST00000242159.3|HOXA7|ENSG00000122592.6|homeobox A7
hg19_v2_chr1_-_92351769_92351787	0.636957	AGGUAGU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr17_+_28705921_28706000	0.56773	AGGUAGU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr7_-_27183263_27183287	0.564333	AGGUAGU	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr2_+_5832799_5832799	0.563362	AGGUAGU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr10_+_180987_181009	0.560872	AGGUAGU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr16_+_69221028_69221092	0.559558	AGGUAGU	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr18_+_19749386_19749404	0.539469	AGGUAGU	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr2_-_39664405_39664453	0.501998	AGGUAGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr14_-_20020272_20020272	0.498725	AGGUAGU	ENST00000551509.1|POTEM|ENSG00000187537.9|POTE ankyrin domain family, member M
hg19_v2_chr14_+_19553365_19553365	0.459608	AGGUAGU	ENST00000409832.3|POTEG|ENSG00000222036.3|POTE ankyrin domain family, member G
hg19_v2_chr4_+_55095264_55095390	0.457853	AGGUAGU	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr10_+_1095416_1095482	0.443199	AGGUAGU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr7_-_75368248_75368265	0.434694	AGGUAGU	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr14_+_90863327_90863356	0.407145	AGGUAGU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr8_+_59465728_59465826	0.400508	AGGUAGU	ENST00000260130.4|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000422546.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000447182.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000413219.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000424270.2|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000523483.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin) 	ENST00000520168.1|SDCBP|ENSG00000137575.7|syndecan binding protein (syntenin)
hg19_v2_chr7_-_83824169_83824217	0.385278	AGGUAGU	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr21_-_39870339_39870443	0.372244	AGGUAGU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr14_+_58666824_58666902	0.371541	AGGUAGU	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr17_+_8213590_8213603	0.360707	AGGUAGU	ENST00000361926.3|ARHGEF15|ENSG00000198844.6|Rho guanine nucleotide exchange factor (GEF) 15
hg19_v2_chr10_+_11206925_11206993	0.358861	AGGUAGU	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr12_-_58240470_58240522	0.346366	AGGUAGU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chrX_+_95939711_95939786	0.343063	AGGUAGU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr9_-_79520989_79521003	0.312557	AGGUAGU	ENST00000376713.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000376718.3|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila) 	ENST00000428286.1|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila)
hg19_v2_chr5_+_178286925_178287007	0.263071	AGGUAGU	ENST00000322434.3|ZNF354B|ENSG00000178338.6|zinc finger protein 354B
hg19_v2_chr3_-_28390581_28390618	0.255552	AGGUAGU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr15_+_66994561_66994597	0.246753	AGGUAGU	ENST00000288840.5|SMAD6|ENSG00000137834.10|SMAD family member 6
hg19_v2_chr11_-_796197_796361	0.233598	AGGUAGU	ENST00000530360.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000528606.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000320230.5|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr1_+_193091080_193091222	0.230758	AGGUAGU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr21_+_42539701_42539728	0.225223	AGGUAGU	ENST00000330333.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000328735.6|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2 	ENST00000347667.5|BACE2|ENSG00000182240.11|beta-site APP-cleaving enzyme 2
hg19_v2_chr12_-_93323013_93323112	0.224526	AGGUAGU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr7_-_120498357_120498456	0.222466	AGGUAGU	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr9_+_133710453_133710453	0.219478	AGGUAGU	ENST00000318560.5|ABL1|ENSG00000097007.13|c-abl oncogene 1, non-receptor tyrosine kinase
hg19_v2_chr12_-_110318263_110318320	0.202924	AGGUAGU	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr16_+_447209_447225	0.187247	AGGUAGU	ENST00000382940.4|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4 	ENST00000219479.2|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4
hg19_v2_chr8_-_82754427_82754539	0.187015	AGGUAGU	ENST00000353788.4|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000520618.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000518183.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000396330.2|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000519119.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000345957.4|SNX16|ENSG00000104497.9|sorting nexin 16
hg19_v2_chr7_-_27205136_27205164	0.176532	AGGUAGU	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr14_-_57735528_57735726	0.176124	AGGUAGU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr12_-_29534074_29534127	0.174754	AGGUAGU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chrX_-_77150985_77151090	0.174697	AGGUAGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr9_+_99212403_99212536	0.163126	AGGUAGU	ENST00000375251.3|HABP4|ENSG00000130956.9|hyaluronan binding protein 4 	ENST00000375249.4|HABP4|ENSG00000130956.9|hyaluronan binding protein 4
hg19_v2_chr19_+_47104493_47104549	0.161528	AGGUAGU	ENST00000291295.9|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000597743.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr22_+_50781723_50781784	0.16133	AGGUAGU	ENST00000359139.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395741.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2 	ENST00000395744.3|PPP6R2|ENSG00000100239.11|protein phosphatase 6, regulatory subunit 2
hg19_v2_chr8_+_58907104_58907131	0.161082	AGGUAGU	ENST00000361488.3|FAM110B|ENSG00000169122.7|family with sequence similarity 110, member B
hg19_v2_chr5_-_74326724_74326724	0.155742	AGGUAGU	ENST00000322348.4|GCNT4|ENSG00000176928.4|glucosaminyl (N-acetyl) transferase 4, core 2
hg19_v2_chr5_+_38846101_38846174	0.148986	AGGUAGU	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chr18_+_21032781_21032795	0.141209	AGGUAGU	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr22_-_22221900_22221970	0.137703	AGGUAGU	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr12_-_76478686_76478813	0.136788	AGGUAGU	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr8_-_23315190_23315235	0.132455	AGGUAGU	ENST00000356206.6|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000358689.4|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4 	ENST00000417069.2|ENTPD4|ENSG00000197217.8|ectonucleoside triphosphate diphosphohydrolase 4
hg19_v2_chr8_+_37594130_37594169	0.128298	AGGUAGU	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr20_+_49348081_49348096	0.115112	AGGUAGU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr12_+_62654119_62654142	0.114111	AGGUAGU	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr18_+_6834472_6834495	0.112529	AGGUAGU	ENST00000581099.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000419673.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000531294.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr4_+_71587669_71587752	0.109515	AGGUAGU	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr4_+_106473768_106473804	0.109494	AGGUAGU	ENST00000265154.2|ARHGEF38|ENSG00000236699.4|Rho guanine nucleotide exchange factor (GEF) 38 	ENST00000420470.2|ARHGEF38|ENSG00000236699.4|Rho guanine nucleotide exchange factor (GEF) 38
hg19_v2_chr16_+_29789561_29789606	0.104836	AGGUAGU	ENST00000400752.4|ZG16|ENSG00000174992.6|zymogen granule protein 16
hg19_v2_chrX_+_135067576_135067634	0.0988631	AGGUAGU	ENST00000370701.1|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370698.3|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370695.4|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
hg19_v2_chr9_+_110045537_110045572	0.0954413	AGGUAGU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr8_-_68255912_68255952	0.0919432	AGGUAGU	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr12_+_12764773_12764852	0.0918381	AGGUAGU	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr3_+_50712672_50712703	0.0900023	AGGUAGU	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr3_+_101504200_101504244	0.0898493	AGGUAGU	ENST00000422132.1|NXPE3|ENSG00000144815.10|neurexophilin and PC-esterase domain family, member 3
hg19_v2_chr16_-_4166186_4166186	0.0837377	AGGUAGU	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr9_-_135819987_135820020	0.0823423	AGGUAGU	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr8_+_121137333_121137352	0.073169	AGGUAGU	ENST00000309791.4|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000297848.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1 	ENST00000247781.3|COL14A1|ENSG00000187955.7|collagen, type XIV, alpha 1
hg19_v2_chr15_-_50411412_50411437	0.072531	AGGUAGU	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr9_+_128509624_128509658	0.0710748	AGGUAGU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chrX_+_2746850_2746863	0.0695587	AGGUAGU	ENST00000381163.3|GYG2|ENSG00000056998.14|glycogenin 2 	ENST00000338623.5|GYG2|ENSG00000056998.14|glycogenin 2 	ENST00000542787.1|GYG2|ENSG00000056998.14|glycogenin 2
hg19_v2_chr6_+_34204642_34204664	0.0686209	AGGUAGU	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr1_-_115259337_115259515	0.0641725	AGGUAGU	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr12_-_112123726_112123809	0.062962	AGGUAGU	ENST00000419234.4|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr1_-_200379180_200379191	0.0556269	AGGUAGU	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr9_+_115983808_115983880	0.0542382	AGGUAGU	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr7_+_35840542_35840671	0.0534409	AGGUAGU	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr21_-_30365136_30365270	0.0443096	AGGUAGU	ENST00000361371.5|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1 	ENST00000389194.2|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1 	ENST00000389195.2|LTN1|ENSG00000198862.9|listerin E3 ubiquitin protein ligase 1
hg19_v2_chr6_-_33267101_33267170	0.0394063	AGGUAGU	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr11_-_110167352_110167447	0.0368322	AGGUAGU	ENST00000533991.1|RDX|ENSG00000137710.10|radixin 	ENST00000528498.1|RDX|ENSG00000137710.10|radixin 	ENST00000405097.1|RDX|ENSG00000137710.10|radixin 	ENST00000528900.1|RDX|ENSG00000137710.10|radixin 	ENST00000530301.1|RDX|ENSG00000137710.10|radixin 	ENST00000343115.4|RDX|ENSG00000137710.10|radixin
hg19_v2_chr9_-_111929560_111929571	0.0353828	AGGUAGU	ENST00000561981.2|FRRS1L|ENSG00000260230.2|ferric-chelate reductase 1-like
hg19_v2_chr1_-_179198702_179198741	0.0332198	AGGUAGU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr8_+_81397876_81397902	0.0304126	AGGUAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr14_+_51706886_51707006	0.0267427	AGGUAGU	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr18_+_9475668_9475698	0.0254181	AGGUAGU	ENST00000383432.3|RALBP1|ENSG00000017797.7|ralA binding protein 1
hg19_v2_chr16_+_70332956_70333130	0.0252366	AGGUAGU	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr16_+_70380732_70380819	0.024894	AGGUAGU	ENST00000302243.7|DDX19A|ENSG00000168872.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
hg19_v2_chr6_-_35464727_35464738	0.0214693	AGGUAGU	ENST00000402886.3|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr2_-_50574856_50574892	0.0201895	AGGUAGU	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr14_+_72399833_72399952	0.0196741	AGGUAGU	ENST00000553530.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6 	ENST00000556437.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6
hg19_v2_chr12_-_123450986_123451056	0.0168947	AGGUAGU	ENST00000344275.7|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000442833.2|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000280560.8|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000540285.1|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9 	ENST00000346530.5|ABCB9|ENSG00000150967.13|ATP-binding cassette, sub-family B (MDR/TAP), member 9
hg19_v2_chrX_+_49687216_49687265	0.013262	AGGUAGU	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr12_+_123868320_123868320	0.011387	AGGUAGU	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chr2_+_160568978_160569064	0.00732734	AGGUAGU	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr2_+_113239710_113239753	0.00623059	AGGUAGU	ENST00000233336.6|TTL|ENSG00000114999.7|tubulin tyrosine ligase
hg19_v2_chr6_+_133562472_133562556	0.00126334	AGGUAGU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr1_+_153232160_153232176	0.000693005	AGGUAGU	ENST00000368742.3|LOR|ENSG00000203782.5|loricrin
