hg19_v2_chr10_+_97515409_97515442	1.86146	AUGGCUU	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr15_-_61521495_61521518	1.4028	AUGGCUU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr12_+_93771659_93771710	1.28985	AUGGCUU	ENST00000337179.5|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4 	ENST00000415493.2|NUDT4|ENSG00000173598.9|nudix (nucleoside diphosphate linked moiety X)-type motif 4
hg19_v2_chr1_-_154842741_154842772	1.25718	AUGGCUU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr6_-_99797522_99797572	1.25444	AUGGCUU	ENST00000389677.5|FAXC|ENSG00000146267.11|failed axon connections homolog (Drosophila)
hg19_v2_chr1_+_183605200_183605220	1.22818	AUGGCUU	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr19_-_2702681_2702707	1.05696	AUGGCUU	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr5_+_112312416_112312440	1.03067	AUGGCUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr1_-_150208291_150208309	1.01961	AUGGCUU	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr6_-_119670919_119670943	0.976197	AUGGCUU	ENST00000368468.3|MAN1A1|ENSG00000111885.5|mannosidase, alpha, class 1A, member 1
hg19_v2_chr11_+_121322832_121322912	0.953673	AUGGCUU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr8_-_8751068_8751158	0.953508	AUGGCUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr1_+_27153173_27153230	0.934998	AUGGCUU	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr1_+_15943995_15944014	0.923868	AUGGCUU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr20_-_52210368_52210384	0.787751	AUGGCUU	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr13_-_76056250_76056280	0.761155	AUGGCUU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr14_-_90085458_90085557	0.749756	AUGGCUU	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr22_+_21771656_21771693	0.743843	AUGGCUU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr22_+_50247449_50247515	0.688744	AUGGCUU	ENST00000216268.5|ZBED4|ENSG00000100426.6|zinc finger, BED-type containing 4
hg19_v2_chr13_-_41240717_41240735	0.67692	AUGGCUU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr5_+_43121698_43121786	0.66426	AUGGCUU	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr7_-_71801980_71802013	0.661703	AUGGCUU	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr7_-_139876812_139876860	0.646049	AUGGCUU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr3_+_152017181_152017229	0.637528	AUGGCUU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr17_-_66287257_66287276	0.590537	AUGGCUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr11_+_125496124_125496344	0.589717	AUGGCUU	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr1_-_245027833_245027855	0.582342	AUGGCUU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr8_+_98656336_98656535	0.582333	AUGGCUU	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr2_-_172017343_172017391	0.581361	AUGGCUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr9_-_127905736_127905815	0.5754	AUGGCUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr4_+_129730779_129730826	0.575095	AUGGCUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr1_-_212004090_212004168	0.572548	AUGGCUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr3_-_72496035_72496069	0.570252	AUGGCUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chrX_-_48776292_48776309	0.568359	AUGGCUU	ENST00000376509.4|PIM2|ENSG00000102096.9|pim-2 oncogene
hg19_v2_chr18_+_29671812_29671892	0.563785	AUGGCUU	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr4_-_42659102_42659161	0.552118	AUGGCUU	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr15_+_77712993_77713081	0.551957	AUGGCUU	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr15_-_34628951_34629045	0.550156	AUGGCUU	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr6_-_34664612_34664642	0.549949	AUGGCUU	ENST00000374023.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106 	ENST00000374026.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106
hg19_v2_chr18_+_32558208_32558340	0.549079	AUGGCUU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr5_-_98262240_98262240	0.522215	AUGGCUU	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chrX_-_135849484_135849551	0.516349	AUGGCUU	ENST00000370620.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENST00000535227.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr10_-_52383644_52383743	0.514396	AUGGCUU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr5_-_168006591_168006638	0.513976	AUGGCUU	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr15_+_91643442_91643521	0.509983	AUGGCUU	ENST00000394232.1|SV2B|ENSG00000185518.7|synaptic vesicle glycoprotein 2B
hg19_v2_chr3_+_179370517_179370543	0.505682	AUGGCUU	ENST00000263966.3|USP13|ENSG00000058056.4|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg19_v2_chr2_+_7057523_7057613	0.502549	AUGGCUU	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr20_-_60640866_60640901	0.502479	AUGGCUU	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr7_-_105925558_105925638	0.50074	AUGGCUU	ENST00000222553.3|NAMPT|ENSG00000105835.7|nicotinamide phosphoribosyltransferase
hg19_v2_chr16_+_69599861_69599887	0.495719	AUGGCUU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr9_+_2015335_2015374	0.492241	AUGGCUU	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr12_+_27396901_27397108	0.476323	AUGGCUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr11_-_108093329_108093375	0.470465	AUGGCUU	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr11_+_20620946_20620946	0.466828	AUGGCUU	ENST00000525748.1|SLC6A5|ENSG00000165970.7|solute carrier family 6 (neurotransmitter transporter), member 5
hg19_v2_chr17_-_9929581_9929626	0.456136	AUGGCUU	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr12_-_58240470_58240522	0.447472	AUGGCUU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr2_-_64371546_64371588	0.441619	AUGGCUU	ENST00000358912.4|PELI1|ENSG00000197329.7|pellino E3 ubiquitin protein ligase 1
hg19_v2_chrX_+_108780062_108780105	0.440536	AUGGCUU	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr2_-_175499294_175499339	0.4323	AUGGCUU	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr3_-_171178157_171178225	0.426397	AUGGCUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr6_+_87865262_87865339	0.421904	AUGGCUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr16_+_85646763_85646822	0.410075	AUGGCUU	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr2_+_178257372_178257523	0.400842	AUGGCUU	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr17_-_60142609_60142657	0.399997	AUGGCUU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chrX_+_41192595_41192651	0.391798	AUGGCUU	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr4_+_128703295_128703496	0.388114	AUGGCUU	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr12_-_14133053_14133159	0.380392	AUGGCUU	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr2_-_122407097_122407163	0.37614	AUGGCUU	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr18_+_72201829_72201845	0.375603	AUGGCUU	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr3_+_43328004_43328095	0.368653	AUGGCUU	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr6_+_119215308_119215391	0.368177	AUGGCUU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr5_-_160973649_160973713	0.367373	AUGGCUU	ENST00000393959.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2 	ENST00000517547.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg19_v2_chr12_-_498620_498693	0.361077	AUGGCUU	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr3_+_16926441_16926463	0.343717	AUGGCUU	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr3_+_25469724_25469773	0.334814	AUGGCUU	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chrX_-_11445856_11445943	0.326302	AUGGCUU	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr21_+_30671189_30671207	0.323902	AUGGCUU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr6_-_16761678_16761721	0.320189	AUGGCUU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr2_-_40679186_40679297	0.319597	AUGGCUU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr19_+_4007644_4007699	0.313071	AUGGCUU	ENST00000262971.2|PIAS4|ENSG00000105229.2|protein inhibitor of activated STAT, 4
hg19_v2_chr1_+_36348790_36348822	0.309253	AUGGCUU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr1_+_2985760_2985775	0.3074	AUGGCUU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr19_+_589893_589911	0.303383	AUGGCUU	ENST00000251287.2|HCN2|ENSG00000099822.2|hyperpolarization activated cyclic nucleotide-gated potassium channel 2
hg19_v2_chr2_-_11484710_11484812	0.301742	AUGGCUU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr7_+_4721885_4721945	0.301312	AUGGCUU	ENST00000328914.4|FOXK1|ENSG00000164916.9|forkhead box K1
hg19_v2_chr7_+_152456829_152456900	0.298184	AUGGCUU	ENST00000377776.3|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000256001.8|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000397282.2|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr3_-_24536253_24536328	0.294998	AUGGCUU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr5_-_147162078_147162106	0.294914	AUGGCUU	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr17_+_40834580_40834633	0.289782	AUGGCUU	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr6_+_96463840_96463892	0.286054	AUGGCUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr12_-_25102252_25102393	0.28577	AUGGCUU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr20_-_48330377_48330441	0.285236	AUGGCUU	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chr6_+_138483058_138483159	0.285028	AUGGCUU	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr6_+_72596604_72596727	0.283505	AUGGCUU	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_-_39339777_39339777	0.283409	AUGGCUU	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr11_-_1593150_1593150	0.279616	AUGGCUU	ENST00000397374.3|DUSP8|ENSG00000184545.6|dual specificity phosphatase 8
hg19_v2_chr10_+_88516396_88516426	0.277473	AUGGCUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr1_+_162039558_162039587	0.273407	AUGGCUU	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr6_+_10556215_10556240	0.272758	AUGGCUU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr4_+_140374961_140375016	0.272577	AUGGCUU	ENST00000305626.5|RAB33B|ENSG00000172007.5|RAB33B, member RAS oncogene family
hg19_v2_chr4_+_38665810_38665827	0.269761	AUGGCUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr14_+_74111578_74111730	0.269514	AUGGCUU	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr2_+_228029281_228029330	0.265623	AUGGCUU	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr12_+_104850740_104850768	0.263584	AUGGCUU	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr17_-_48785216_48785291	0.260718	AUGGCUU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr11_-_77532050_77532066	0.258598	AUGGCUU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr3_-_135914615_135914701	0.255621	AUGGCUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr1_-_155942086_155942145	0.255529	AUGGCUU	ENST00000368315.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr19_-_38714847_38714890	0.252752	AUGGCUU	ENST00000420980.2|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1 	ENST00000355526.4|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1
hg19_v2_chr20_+_30865429_30865480	0.249257	AUGGCUU	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chrX_+_152953505_152953554	0.248495	AUGGCUU	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chr9_+_4985228_4985245	0.245479	AUGGCUU	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr12_-_111021110_111021142	0.244915	AUGGCUU	ENST00000354300.3|PPTC7|ENSG00000196850.4|PTC7 protein phosphatase homolog (S. cerevisiae)
hg19_v2_chr1_-_72748417_72748510	0.243535	AUGGCUU	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr15_+_31619013_31619095	0.243075	AUGGCUU	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr2_-_174830430_174830563	0.240287	AUGGCUU	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr8_-_71316021_71316068	0.23979	AUGGCUU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr4_-_39033963_39034047	0.238411	AUGGCUU	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr10_-_1779663_1779676	0.233181	AUGGCUU	ENST00000381312.1|ADARB2|ENSG00000185736.11|adenosine deaminase, RNA-specific, B2 (non-functional)
hg19_v2_chr3_+_88188254_88188254	0.228039	AUGGCUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr11_-_22647350_22647396	0.226284	AUGGCUU	ENST00000327470.3|FANCF|ENSG00000183161.3|Fanconi anemia, complementation group F
hg19_v2_chr18_+_13218769_13218792	0.226245	AUGGCUU	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr17_-_44896047_44896126	0.225211	AUGGCUU	ENST00000225512.5|WNT3|ENSG00000108379.5|wingless-type MMTV integration site family, member 3
hg19_v2_chr9_+_2621798_2621834	0.221125	AUGGCUU	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr9_-_93405352_93405386	0.219685	AUGGCUU	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr1_-_205601064_205601090	0.219022	AUGGCUU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr13_+_98086445_98086493	0.218663	AUGGCUU	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr15_-_68498376_68498417	0.216404	AUGGCUU	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr10_+_76871454_76871467	0.213639	AUGGCUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr1_+_28995231_28995250	0.212649	AUGGCUU	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr2_-_201936302_201936416	0.210616	AUGGCUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr12_-_58027138_58027159	0.209902	AUGGCUU	ENST00000341156.4|B4GALNT1|ENSG00000135454.9|beta-1,4-N-acetyl-galactosaminyl transferase 1
hg19_v2_chr1_-_68962782_68962801	0.208638	AUGGCUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr2_+_166095898_166095940	0.208435	AUGGCUU	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr10_+_69644404_69644427	0.208252	AUGGCUU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr10_+_93683519_93683594	0.206317	AUGGCUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr17_-_38804061_38804112	0.202823	AUGGCUU	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr6_-_86352642_86352709	0.20243	AUGGCUU	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr12_+_64845660_64845702	0.202178	AUGGCUU	ENST00000331710.5|TBK1|ENSG00000183735.5|TANK-binding kinase 1
hg19_v2_chr9_-_15510989_15511017	0.199962	AUGGCUU	ENST00000380715.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380716.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380738.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1 	ENST00000380733.4|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chr8_+_110552337_110552423	0.198412	AUGGCUU	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr6_+_134274322_134274342	0.194122	AUGGCUU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr10_+_5454505_5454540	0.192769	AUGGCUU	ENST00000355029.4|NET1|ENSG00000173848.14|neuroepithelial cell transforming 1
hg19_v2_chr14_+_102228123_102228237	0.184308	AUGGCUU	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr17_+_26989109_26989248	0.183968	AUGGCUU	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr14_+_103058948_103059005	0.18295	AUGGCUU	ENST00000262241.6|RCOR1|ENSG00000089902.8|REST corepressor 1
hg19_v2_chr11_+_19138670_19138732	0.180755	AUGGCUU	ENST00000446113.2|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13 	ENST00000399351.3|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13
hg19_v2_chr6_-_11044509_11044582	0.180715	AUGGCUU	ENST00000354666.3|ELOVL2|ENSG00000197977.3|ELOVL fatty acid elongase 2
hg19_v2_chr2_+_48541776_48541874	0.176752	AUGGCUU	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr12_+_53774423_53774658	0.176214	AUGGCUU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr2_+_204192942_204193038	0.175151	AUGGCUU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr8_+_21777159_21777221	0.173192	AUGGCUU	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr20_+_39765581_39765646	0.169996	AUGGCUU	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr17_+_57970469_57970600	0.169766	AUGGCUU	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr3_-_56502375_56502428	0.166984	AUGGCUU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr13_+_42622781_42622889	0.161887	AUGGCUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr17_-_73975444_73975528	0.161523	AUGGCUU	ENST00000293217.5|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl 	ENST00000537812.1|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl
hg19_v2_chr8_-_27115903_27115927	0.161397	AUGGCUU	ENST00000350889.4|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519997.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519614.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000522908.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000265770.7|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr10_+_120967072_120967101	0.160733	AUGGCUU	ENST00000392870.2|GRK5|ENSG00000198873.10|G protein-coupled receptor kinase 5
hg19_v2_chr9_-_35732362_35732392	0.159531	AUGGCUU	ENST00000314888.9|TLN1|ENSG00000137076.14|talin 1 	ENST00000540444.1|TLN1|ENSG00000137076.14|talin 1
hg19_v2_chrX_-_24690771_24690794	0.158656	AUGGCUU	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr15_-_48470558_48470714	0.158486	AUGGCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr20_-_48532019_48532045	0.158442	AUGGCUU	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr5_+_149109825_149109907	0.156642	AUGGCUU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr21_-_40685477_40685496	0.152945	AUGGCUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr10_-_88281494_88281572	0.152664	AUGGCUU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr14_-_75593708_75593783	0.152186	AUGGCUU	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr19_+_1941117_1941200	0.147798	AUGGCUU	ENST00000255641.8|CSNK1G2|ENSG00000133275.11|casein kinase 1, gamma 2
hg19_v2_chr5_-_131132658_131132719	0.147651	AUGGCUU	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr3_-_53381539_53381654	0.147597	AUGGCUU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr1_+_110527308_110527349	0.146431	AUGGCUU	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr2_+_176987088_176987088	0.145449	AUGGCUU	ENST00000249499.6|HOXD9|ENSG00000128709.10|homeobox D9
hg19_v2_chr12_+_56367697_56367893	0.145393	AUGGCUU	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr16_+_577697_577856	0.14283	AUGGCUU	ENST00000562370.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000568988.1|CAPN15|ENSG00000103326.6|calpain 15 	ENST00000219611.2|CAPN15|ENSG00000103326.6|calpain 15
hg19_v2_chr12_+_27485823_27485868	0.142567	AUGGCUU	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr15_+_32907691_32907772	0.142488	AUGGCUU	ENST00000361627.3|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000567348.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000563864.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A 	ENST00000543522.1|ARHGAP11A|ENSG00000198826.6|Rho GTPase activating protein 11A
hg19_v2_chr10_+_105253661_105253736	0.141694	AUGGCUU	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr2_-_2334888_2335053	0.139893	AUGGCUU	ENST00000428368.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like 	ENST00000399161.2|MYT1L|ENSG00000186487.13|myelin transcription factor 1-like
hg19_v2_chr1_+_20208870_20209006	0.136241	AUGGCUU	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr5_+_75378997_75379080	0.135952	AUGGCUU	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr4_+_47033345_47033377	0.135947	AUGGCUU	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr8_+_38758737_38758763	0.133596	AUGGCUU	ENST00000521746.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 	ENST00000420274.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg19_v2_chr1_+_36396677_36396749	0.133044	AUGGCUU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr3_+_169684553_169684616	0.132081	AUGGCUU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr1_-_150849208_150849244	0.130992	AUGGCUU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr16_-_87525651_87525651	0.130633	AUGGCUU	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr17_-_56494713_56494851	0.127525	AUGGCUU	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr1_+_209757051_209757074	0.125014	AUGGCUU	ENST00000009105.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000423146.1|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG 	ENST00000361322.2|CAMK1G|ENSG00000008118.5|calcium/calmodulin-dependent protein kinase IG
hg19_v2_chr10_-_99052382_99052413	0.124232	AUGGCUU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr19_-_44143939_44144010	0.123139	AUGGCUU	ENST00000222374.2|CADM4|ENSG00000105767.2|cell adhesion molecule 4
hg19_v2_chr10_+_64564469_64564535	0.122721	AUGGCUU	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr8_-_89339705_89339721	0.122294	AUGGCUU	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr7_-_26578407_26578451	0.121258	AUGGCUU	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chr9_-_19786926_19786926	0.120326	AUGGCUU	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr1_-_46598284_46598356	0.119299	AUGGCUU	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr6_-_17706618_17706666	0.118263	AUGGCUU	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr22_-_42017021_42017100	0.114609	AUGGCUU	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr17_+_29421900_29421951	0.112897	AUGGCUU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr7_+_5085452_5085553	0.110572	AUGGCUU	ENST00000353796.3|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger 	ENST00000396904.2|RBAK-RBAKDN|ENSG00000272968.1|RBAK-RBAKDN readthrough 	ENST00000396912.1|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger
hg19_v2_chr7_-_35734730_35734777	0.109275	AUGGCUU	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr15_-_68521996_68522085	0.106924	AUGGCUU	ENST00000418702.2|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000565471.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000564752.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000562767.1|RP11-315D16.2|ENSG00000260007.1|Uncharacterized protein  	ENST00000566347.1|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant 	ENST00000249806.5|CLN6|ENSG00000128973.7|ceroid-lipofuscinosis, neuronal 6, late infantile, variant
hg19_v2_chr2_+_24714729_24714927	0.106755	AUGGCUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr8_+_1449532_1449532	0.106489	AUGGCUU	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr1_+_97187318_97187380	0.105781	AUGGCUU	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr10_+_76586348_76586400	0.104313	AUGGCUU	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr19_-_2015699_2015748	0.103818	AUGGCUU	ENST00000255608.4|BTBD2|ENSG00000133243.4|BTB (POZ) domain containing 2
hg19_v2_chr17_+_79373540_79373540	0.102615	AUGGCUU	ENST00000307745.7|RP11-1055B8.7|ENSG00000171282.9|BAH and coiled-coil domain-containing protein 1
hg19_v2_chr12_+_111471828_111471975	0.102455	AUGGCUU	ENST00000261726.6|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr20_+_47538357_47538427	0.101759	AUGGCUU	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr2_-_64881018_64881064	0.101411	AUGGCUU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr7_-_105517021_105517050	0.10038	AUGGCUU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr15_-_64648273_64648442	0.0981706	AUGGCUU	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr8_-_70747205_70747299	0.0972677	AUGGCUU	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr18_-_21166841_21166864	0.0968289	AUGGCUU	ENST00000269228.5|NPC1|ENSG00000141458.8|Niemann-Pick disease, type C1
hg19_v2_chr1_-_10856694_10856715	0.095795	AUGGCUU	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr1_+_159141397_159141549	0.0943691	AUGGCUU	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr18_-_23670546_23670605	0.0915967	AUGGCUU	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr6_-_26659913_26659982	0.0909479	AUGGCUU	ENST00000480036.1|ZNF322|ENSG00000181315.6|zinc finger protein 322 	ENST00000415922.2|ZNF322|ENSG00000181315.6|zinc finger protein 322
hg19_v2_chr3_+_45636219_45636351	0.0900753	AUGGCUU	ENST00000273317.4|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chr8_-_72268889_72268955	0.0885737	AUGGCUU	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr22_+_40390930_40390994	0.0884839	AUGGCUU	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr11_+_68228186_68228281	0.0884266	AUGGCUU	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr19_+_18263928_18264072	0.0859723	AUGGCUU	ENST00000222254.8|PIK3R2|ENSG00000105647.10|phosphoinositide-3-kinase, regulatory subunit 2 (beta)
hg19_v2_chr6_-_7313381_7313458	0.084264	AUGGCUU	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chr2_-_175351744_175351828	0.0822554	AUGGCUU	ENST00000295500.4|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392552.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155 	ENST00000392551.2|GPR155|ENSG00000163328.9|G protein-coupled receptor 155
hg19_v2_chr8_+_28747884_28747938	0.0812593	AUGGCUU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr7_+_99613195_99613206	0.081033	AUGGCUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr1_-_220445757_220445819	0.0783427	AUGGCUU	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr2_+_198365122_198365137	0.076659	AUGGCUU	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr16_+_2076869_2076929	0.0762272	AUGGCUU	ENST00000424542.2|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000432365.2|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr20_+_49126881_49126936	0.0753911	AUGGCUU	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr22_-_39096661_39096681	0.0727803	AUGGCUU	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr7_-_138666053_138666146	0.0719993	AUGGCUU	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr14_+_35591735_35591834	0.0710602	AUGGCUU	ENST00000604948.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000605201.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000250377.7|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000321130.10|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000534898.4|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr19_-_17356697_17356762	0.0687318	AUGGCUU	ENST00000291442.3|NR2F6|ENSG00000160113.5|nuclear receptor subfamily 2, group F, member 6
hg19_v2_chr2_-_129076151_129076151	0.0651355	AUGGCUU	ENST00000259241.6|HS6ST1|ENSG00000136720.6|heparan sulfate 6-O-sulfotransferase 1
hg19_v2_chr5_-_55529115_55529186	0.0651068	AUGGCUU	ENST00000513241.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55 	ENST00000341048.4|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr8_-_133493200_133493352	0.064713	AUGGCUU	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr6_+_41755389_41755441	0.0633326	AUGGCUU	ENST00000398884.3|TOMM6|ENSG00000214736.3|translocase of outer mitochondrial membrane 6 homolog (yeast) 	ENST00000398881.3|TOMM6|ENSG00000214736.3|translocase of outer mitochondrial membrane 6 homolog (yeast)
hg19_v2_chr3_+_49591881_49591940	0.0620122	AUGGCUU	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr6_+_136172820_136172846	0.0613743	AUGGCUU	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr12_-_111180644_111180744	0.061002	AUGGCUU	ENST00000551676.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000550991.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000335007.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000340766.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme
hg19_v2_chr3_-_105587879_105587892	0.0602045	AUGGCUU	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr17_-_8066250_8066301	0.0601783	AUGGCUU	ENST00000488857.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000481878.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000498285.1|RP11-599B13.6|ENSG00000263620.1|Uncharacterized protein  	ENST00000316509.6|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2)
hg19_v2_chr14_-_57735528_57735726	0.0595224	AUGGCUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_+_135468516_135468621	0.0576846	AUGGCUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr7_-_140340576_140340622	0.0571452	AUGGCUU	ENST00000275884.6|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A 	ENST00000475837.1|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A
hg19_v2_chr20_+_42875887_42875921	0.0558307	AUGGCUU	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
hg19_v2_chr16_-_20911641_20911720	0.0554671	AUGGCUU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr17_-_37607497_37607539	0.0536245	AUGGCUU	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr10_+_99185917_99185956	0.0532181	AUGGCUU	ENST00000334828.5|PGAM1|ENSG00000171314.8|phosphoglycerate mutase 1 (brain)
hg19_v2_chr10_-_62149433_62149488	0.0528284	AUGGCUU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr4_+_93225550_93225641	0.0524937	AUGGCUU	ENST00000282020.4|GRID2|ENSG00000152208.7|glutamate receptor, ionotropic, delta 2
hg19_v2_chr19_+_10527449_10527619	0.0520894	AUGGCUU	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr4_+_170541660_170541677	0.0511558	AUGGCUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr6_-_116381918_116381977	0.0506405	AUGGCUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr18_-_51751132_51751158	0.0505502	AUGGCUU	ENST00000256429.3|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr16_+_72042487_72042700	0.0503049	AUGGCUU	ENST00000572887.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000219240.4|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000574309.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone) 	ENST00000576145.1|DHODH|ENSG00000102967.7|dihydroorotate dehydrogenase (quinone)
hg19_v2_chr10_-_75008620_75008620	0.044571	AUGGCUU	ENST00000372950.4|DNAJC9|ENSG00000213551.4|DnaJ (Hsp40) homolog, subfamily C, member 9
hg19_v2_chr18_-_29522989_29523104	0.0444383	AUGGCUU	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr18_-_45456930_45456970	0.0430245	AUGGCUU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr17_-_80606304_80606411	0.0424498	AUGGCUU	ENST00000392325.4|WDR45B|ENSG00000141580.11|WD repeat domain 45B
hg19_v2_chr11_-_101454658_101454671	0.0418691	AUGGCUU	ENST00000344327.3|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr6_+_36562132_36562154	0.0400072	AUGGCUU	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr15_-_33360085_33360256	0.0398629	AUGGCUU	ENST00000334528.9|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr16_+_58497567_58497586	0.0397193	AUGGCUU	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr1_-_93645818_93645918	0.0390362	AUGGCUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr5_-_32313019_32313081	0.0388235	AUGGCUU	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr18_+_32073253_32073339	0.0383789	AUGGCUU	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr5_+_42423872_42424026	0.0369591	AUGGCUU	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chrX_+_152783131_152783151	0.036511	AUGGCUU	ENST00000349466.2|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3 	ENST00000370186.1|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3
hg19_v2_chr1_-_155990580_155990750	0.0360028	AUGGCUU	ENST00000531917.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000480567.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000526212.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000529008.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000496742.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000295702.4|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta)
hg19_v2_chr3_-_48723268_48723360	0.0359958	AUGGCUU	ENST00000439518.1|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000416649.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000341520.4|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain 	ENST00000294129.2|NCKIPSD|ENSG00000213672.3|NCK interacting protein with SH3 domain
hg19_v2_chrX_+_12156582_12156603	0.0358877	AUGGCUU	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr8_-_55014415_55014595	0.0350403	AUGGCUU	ENST00000522007.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000521898.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000518546.1|LYPLA1|ENSG00000120992.13|lysophospholipase I 	ENST00000316963.3|LYPLA1|ENSG00000120992.13|lysophospholipase I
hg19_v2_chr20_-_9819479_9819532	0.0327604	AUGGCUU	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr6_+_163835669_163835693	0.0327186	AUGGCUU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr3_-_11762202_11762226	0.0320252	AUGGCUU	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr17_+_75136980_75137028	0.0291871	AUGGCUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr15_-_101792137_101792159	0.0281416	AUGGCUU	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chr6_-_53409890_53409927	0.0261664	AUGGCUU	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr20_-_61569227_61569287	0.0260536	AUGGCUU	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr10_+_17794251_17794260	0.025642	AUGGCUU	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr11_-_119599794_119599857	0.0255961	AUGGCUU	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr12_+_4382917_4382938	0.0254179	AUGGCUU	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr12_+_112451120_112451203	0.0254026	AUGGCUU	ENST00000261735.3|ERP29|ENSG00000089248.6|endoplasmic reticulum protein 29 	ENST00000455836.1|ERP29|ENSG00000089248.6|endoplasmic reticulum protein 29
hg19_v2_chr1_-_150552006_150552093	0.0253757	AUGGCUU	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chrX_-_18372792_18372847	0.0252755	AUGGCUU	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr14_+_99947715_99947791	0.0244833	AUGGCUU	ENST00000389879.5|CCNK|ENSG00000090061.13|cyclin K 	ENST00000557441.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555049.1|CCNK|ENSG00000090061.13|cyclin K 	ENST00000555842.1|CCNK|ENSG00000090061.13|cyclin K
hg19_v2_chr8_-_104427313_104427413	0.0243106	AUGGCUU	ENST00000297578.4|SLC25A32|ENSG00000164933.7|solute carrier family 25 (mitochondrial folate carrier), member 32
hg19_v2_chr1_+_145438469_145438501	0.0237802	AUGGCUU	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr1_+_171810606_171810649	0.0235273	AUGGCUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr2_-_153574480_153574552	0.023425	AUGGCUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr10_+_101419187_101419313	0.0219746	AUGGCUU	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chr15_+_72766651_72766680	0.0206191	AUGGCUU	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr11_+_9482512_9482534	0.0194417	AUGGCUU	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr1_+_24882560_24882620	0.0192244	AUGGCUU	ENST00000374392.2|NCMAP|ENSG00000184454.6|noncompact myelin associated protein
hg19_v2_chr10_-_114206649_114206688	0.0191826	AUGGCUU	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr10_+_18041218_18041227	0.019096	AUGGCUU	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr9_+_108006880_108006943	0.019004	AUGGCUU	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr1_-_184723942_184724047	0.0185879	AUGGCUU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr1_-_149982624_149982719	0.0182421	AUGGCUU	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr11_+_98891797_98891920	0.0161657	AUGGCUU	ENST00000527185.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000528682.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000524871.1|CNTN5|ENSG00000149972.6|contactin 5
hg19_v2_chr17_-_78450398_78450413	0.0160793	AUGGCUU	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr1_-_37499726_37499850	0.0135763	AUGGCUU	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr6_+_88182643_88182722	0.013575	AUGGCUU	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr8_-_143696833_143696833	0.0132536	AUGGCUU	ENST00000356613.2|ARC|ENSG00000198576.2|activity-regulated cytoskeleton-associated protein
hg19_v2_chr17_+_38474489_38474548	0.0130463	AUGGCUU	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr2_-_47798044_47798132	0.0129798	AUGGCUU	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr19_+_57862622_57862694	0.0113883	AUGGCUU	ENST00000391705.3|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000443917.2|ZNF304|ENSG00000131845.10|zinc finger protein 304 	ENST00000598744.1|ZNF304|ENSG00000131845.10|zinc finger protein 304
hg19_v2_chr8_-_6420930_6420957	0.0108696	AUGGCUU	ENST00000325203.5|ANGPT2|ENSG00000091879.9|angiopoietin 2
hg19_v2_chr16_-_71758602_71758604	0.0102986	AUGGCUU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr2_+_155554797_155554837	0.0102286	AUGGCUU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr5_+_175223313_175223349	0.0100909	AUGGCUU	ENST00000359546.4|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chr8_+_64081118_64081131	0.00934999	AUGGCUU	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr6_+_133562472_133562556	0.00923345	AUGGCUU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr18_-_18691739_18691812	0.00767158	AUGGCUU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr17_+_57297807_57297923	0.00572482	AUGGCUU	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr7_-_27142290_27142430	0.00357998	AUGGCUU	ENST00000222718.5|HOXA2|ENSG00000105996.5|homeobox A2
hg19_v2_chr16_+_69345243_69345312	0.00170918	AUGGCUU	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr6_-_94129244_94129284	0.00170854	AUGGCUU	ENST00000369303.4|EPHA7|ENSG00000135333.9|EPH receptor A7 	ENST00000369297.1|EPHA7|ENSG00000135333.9|EPH receptor A7
hg19_v2_chr10_+_112679301_112679346	0.00148471	AUGGCUU	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr12_+_52345448_52345532	0.000947138	AUGGCUU	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr5_+_76506706_76506787	0.000748409	AUGGCUU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr7_-_112430647_112430776	6.01075e-05	AUGGCUU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
