hg19_v2_chr15_+_81071684_81071719	2.54963	CACAGUG	ENST00000220244.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000394685.3|KIAA1199|ENSG00000103888.11|KIAA1199 	ENST00000356249.5|KIAA1199|ENSG00000103888.11|KIAA1199
hg19_v2_chr2_-_227664474_227664508	2.33996	CACAGUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr1_-_57045228_57045242	2.17533	CACAGUG	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr3_-_32022733_32022809	1.70651	CACAGUG	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr1_-_225840747_225840860	1.58796	CACAGUG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr2_-_169104651_169104651	1.57119	CACAGUG	ENST00000355999.4|STK39|ENSG00000198648.6|serine threonine kinase 39
hg19_v2_chr1_-_86043921_86043937	1.45317	CACAGUG	ENST00000535924.2|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr5_-_57756087_57756087	1.29022	CACAGUG	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr11_+_12695944_12695989	1.27399	CACAGUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr16_-_70719925_70719989	1.22778	CACAGUG	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr5_-_121413974_121413986	1.20414	CACAGUG	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr12_-_106641728_106641805	1.13174	CACAGUG	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr7_-_103629963_103630056	1.12903	CACAGUG	ENST00000428762.1|RELN|ENSG00000189056.9|reelin 	ENST00000343529.5|RELN|ENSG00000189056.9|reelin 	ENST00000424685.2|RELN|ENSG00000189056.9|reelin
hg19_v2_chr21_-_28338732_28338832	1.12902	CACAGUG	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr15_+_33010175_33010211	1.10121	CACAGUG	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr1_-_95392635_95392834	1.10087	CACAGUG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr16_-_65155833_65155976	1.09321	CACAGUG	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr4_-_177713788_177713881	1.03501	CACAGUG	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chrX_+_102631248_102631335	0.981851	CACAGUG	ENST00000361298.4|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372645.3|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1 	ENST00000372635.1|NGFRAP1|ENSG00000166681.9|nerve growth factor receptor (TNFRSF16) associated protein 1
hg19_v2_chr14_-_30396948_30396998	0.949184	CACAGUG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr10_-_81205373_81205429	0.935253	CACAGUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr2_-_20212422_20212455	0.91296	CACAGUG	ENST00000421259.2|MATN3|ENSG00000132031.8|matrilin 3 	ENST00000407540.3|MATN3|ENSG00000132031.8|matrilin 3
hg19_v2_chr4_+_55095264_55095390	0.823228	CACAGUG	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr12_-_124457371_124457387	0.817127	CACAGUG	ENST00000238156.3|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92 	ENST00000545037.1|CCDC92|ENSG00000119242.4|coiled-coil domain containing 92
hg19_v2_chr7_+_94285637_94285689	0.788538	CACAGUG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr21_-_39288743_39288765	0.769992	CACAGUG	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr10_-_90712520_90712536	0.762252	CACAGUG	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr11_-_115375107_115375283	0.757331	CACAGUG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr3_-_114790179_114790222	0.750306	CACAGUG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr8_-_41166953_41167016	0.726471	CACAGUG	ENST00000220772.3|SFRP1|ENSG00000104332.7|secreted frizzled-related protein 1
hg19_v2_chr11_+_73882144_73882276	0.680614	CACAGUG	ENST00000328257.8|PPME1|ENSG00000214517.4|protein phosphatase methylesterase 1
hg19_v2_chr3_+_37903432_37903475	0.668477	CACAGUG	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr14_+_101193164_101193241	0.661368	CACAGUG	ENST00000341267.4|DLK1|ENSG00000185559.9|delta-like 1 homolog (Drosophila)
hg19_v2_chr21_-_44846999_44847017	0.658841	CACAGUG	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr5_-_93447333_93447386	0.622843	CACAGUG	ENST00000395965.3|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000505869.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000509163.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A
hg19_v2_chr9_+_103790991_103791001	0.61946	CACAGUG	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr14_-_61116168_61116180	0.617753	CACAGUG	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr12_-_77272765_77272840	0.616464	CACAGUG	ENST00000547435.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000552330.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000546966.1|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2 	ENST00000311083.5|CSRP2|ENSG00000175183.5|cysteine and glycine-rich protein 2
hg19_v2_chr2_+_5832799_5832799	0.616454	CACAGUG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr5_-_111093406_111093458	0.610653	CACAGUG	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr2_+_189839046_189839105	0.610249	CACAGUG	ENST00000304636.3|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1 	ENST00000317840.5|COL3A1|ENSG00000168542.8|collagen, type III, alpha 1
hg19_v2_chr6_-_139695757_139695795	0.609198	CACAGUG	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr3_-_129407535_129407575	0.600597	CACAGUG	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr10_+_60272814_60272900	0.60036	CACAGUG	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr15_-_56209306_56209344	0.589891	CACAGUG	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr17_+_47572647_47572662	0.581344	CACAGUG	ENST00000172229.3|NGFR|ENSG00000064300.4|nerve growth factor receptor
hg19_v2_chr5_+_109025067_109025146	0.573958	CACAGUG	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr2_+_148602058_148602185	0.570375	CACAGUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr1_+_205473720_205473732	0.562729	CACAGUG	ENST00000429964.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000506784.1|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18 	ENST00000360066.2|CDK18|ENSG00000117266.11|cyclin-dependent kinase 18
hg19_v2_chr7_+_116312411_116312502	0.558471	CACAGUG	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr20_+_34700333_34700348	0.545886	CACAGUG	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr3_-_124774802_124774852	0.539033	CACAGUG	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr4_-_89744457_89744512	0.529082	CACAGUG	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr17_+_28705921_28706000	0.519801	CACAGUG	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr6_-_46293378_46293415	0.518517	CACAGUG	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chr22_-_29075853_29075853	0.512572	CACAGUG	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr2_+_46926048_46926095	0.512041	CACAGUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr19_+_15218180_15218249	0.510362	CACAGUG	ENST00000342784.2|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000597977.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000600440.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg19_v2_chr4_-_7873981_7874044	0.501115	CACAGUG	ENST00000360265.4|AFAP1|ENSG00000196526.6|actin filament associated protein 1
hg19_v2_chr7_-_30066233_30066332	0.477603	CACAGUG	ENST00000222803.5|FKBP14|ENSG00000106080.6|FK506 binding protein 14, 22 kDa
hg19_v2_chr5_-_179780312_179780387	0.476356	CACAGUG	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr13_+_113622810_113622830	0.475827	CACAGUG	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr10_+_89419370_89419643	0.472999	CACAGUG	ENST00000361175.4|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2 	ENST00000456849.1|PAPSS2|ENSG00000198682.8|3'-phosphoadenosine 5'-phosphosulfate synthase 2
hg19_v2_chr20_+_62496596_62496655	0.468917	CACAGUG	ENST00000369927.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000346249.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000348257.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000352482.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000351424.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000217121.5|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2 	ENST00000358548.4|TPD52L2|ENSG00000101150.13|tumor protein D52-like 2
hg19_v2_chr4_-_111119804_111119832	0.465225	CACAGUG	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr1_-_19229248_19229275	0.460859	CACAGUG	ENST00000375341.3|ALDH4A1|ENSG00000159423.12|aldehyde dehydrogenase 4 family, member A1
hg19_v2_chr6_+_142622991_142623004	0.453253	CACAGUG	ENST00000230173.6|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000367608.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr4_-_22517620_22517712	0.448115	CACAGUG	ENST00000502482.1|GPR125|ENSG00000152990.9|G protein-coupled receptor 125 	ENST00000334304.5|GPR125|ENSG00000152990.9|G protein-coupled receptor 125
hg19_v2_chr1_-_68299130_68299160	0.44768	CACAGUG	ENST00000370982.3|GNG12|ENSG00000172380.5|guanine nucleotide binding protein (G protein), gamma 12
hg19_v2_chr5_+_82767284_82767310	0.44409	CACAGUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr14_-_92413727_92413743	0.439248	CACAGUG	ENST00000267620.10|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr5_-_95297678_95297775	0.429522	CACAGUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr17_-_62658186_62658231	0.418515	CACAGUG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr5_+_52285144_52285166	0.413208	CACAGUG	ENST00000296585.5|ITGA2|ENSG00000164171.6|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v2_chr7_-_27183263_27183287	0.409193	CACAGUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr5_+_149887672_149887698	0.387366	CACAGUG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr11_-_117186946_117186981	0.3782	CACAGUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr21_-_43346790_43346823	0.377189	CACAGUG	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr3_+_127771212_127771316	0.374667	CACAGUG	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr2_-_151344172_151344243	0.364761	CACAGUG	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr17_-_40761375_40761409	0.361808	CACAGUG	ENST00000543197.1|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C 	ENST00000309428.5|FAM134C|ENSG00000141699.6|family with sequence similarity 134, member C
hg19_v2_chr22_+_46067678_46067771	0.360155	CACAGUG	ENST00000381061.4|ATXN10|ENSG00000130638.11|ataxin 10 	ENST00000252934.5|ATXN10|ENSG00000130638.11|ataxin 10
hg19_v2_chr17_-_53499310_53499353	0.355138	CACAGUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr20_-_50384864_50384943	0.352734	CACAGUG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr11_+_34642656_34642682	0.352309	CACAGUG	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr5_+_34656331_34656351	0.350507	CACAGUG	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr9_+_103204553_103204560	0.348267	CACAGUG	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr12_+_54422142_54422239	0.345025	CACAGUG	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr7_+_100210133_100210214	0.334308	CACAGUG	ENST00000393950.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3 	ENST00000424091.2|MOSPD3|ENSG00000106330.7|motile sperm domain containing 3
hg19_v2_chr16_+_1756162_1756241	0.328875	CACAGUG	ENST00000250894.4|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3 	ENST00000356010.5|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3
hg19_v2_chr19_+_45251804_45251840	0.323687	CACAGUG	ENST00000164227.5|BCL3|ENSG00000069399.8|B-cell CLL/lymphoma 3
hg19_v2_chr20_-_10654639_10654694	0.309494	CACAGUG	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr12_-_90049828_90049847	0.308029	CACAGUG	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr12_-_110318263_110318320	0.303599	CACAGUG	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr18_+_67956135_67956144	0.303241	CACAGUG	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr19_-_14629224_14629262	0.302988	CACAGUG	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr1_-_149889382_149889434	0.299779	CACAGUG	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr6_-_33267101_33267170	0.297778	CACAGUG	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr3_+_154797428_154797450	0.297514	CACAGUG	ENST00000460393.1|MME|ENSG00000196549.6|membrane metallo-endopeptidase
hg19_v2_chr17_+_42148097_42148119	0.296142	CACAGUG	ENST00000269097.4|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr12_-_65146636_65146651	0.295904	CACAGUG	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr3_-_87040233_87040257	0.295258	CACAGUG	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr2_-_85555385_85555548	0.295239	CACAGUG	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chrX_+_49687216_49687265	0.290282	CACAGUG	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr20_+_5107420_5107432	0.288308	CACAGUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr6_-_90529418_90529528	0.285757	CACAGUG	ENST00000439638.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000369393.3|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000428876.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast)
hg19_v2_chr8_-_67525473_67525518	0.285755	CACAGUG	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr16_+_69599861_69599887	0.285627	CACAGUG	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr9_-_88714421_88714506	0.28559	CACAGUG	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chr16_-_73082274_73082274	0.285367	CACAGUG	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr2_-_166930131_166930149	0.285143	CACAGUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr8_+_132916318_132916401	0.275275	CACAGUG	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr2_-_64881018_64881064	0.274014	CACAGUG	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chrX_+_64708615_64708615	0.272074	CACAGUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr8_+_40010989_40011008	0.270661	CACAGUG	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr11_-_18656028_18656040	0.270549	CACAGUG	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr7_+_98246588_98246609	0.269685	CACAGUG	ENST00000265634.3|NPTX2|ENSG00000106236.3|neuronal pentraxin II
hg19_v2_chr18_-_30050395_30050495	0.26926	CACAGUG	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr7_-_139876812_139876860	0.263608	CACAGUG	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr3_+_107241783_107241850	0.263056	CACAGUG	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr6_+_148663729_148663847	0.262395	CACAGUG	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr19_-_50143452_50143468	0.261619	CACAGUG	ENST00000246792.3|RRAS|ENSG00000126458.3|related RAS viral (r-ras) oncogene homolog
hg19_v2_chr13_-_107187462_107187462	0.259074	CACAGUG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr8_+_1922024_1922069	0.257144	CACAGUG	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr10_-_70287231_70287290	0.253463	CACAGUG	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr15_+_96873921_96873946	0.250039	CACAGUG	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr3_-_178790057_178790072	0.249536	CACAGUG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr20_-_14318248_14318264	0.249281	CACAGUG	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr9_-_107690420_107690518	0.243653	CACAGUG	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr6_-_99873145_99873207	0.239033	CACAGUG	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr3_+_54156664_54156694	0.237853	CACAGUG	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr9_+_103235365_103235419	0.23773	CACAGUG	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr11_+_9406169_9406210	0.231235	CACAGUG	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr1_-_95007193_95007356	0.230481	CACAGUG	ENST00000370207.4|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor) 	ENST00000334047.7|F3|ENSG00000117525.9|coagulation factor III (thromboplastin, tissue factor)
hg19_v2_chrX_-_40594755_40594809	0.22912	CACAGUG	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr3_+_23986748_23986761	0.220985	CACAGUG	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr22_-_39239987_39240041	0.217692	CACAGUG	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chr19_+_7968728_7968781	0.214416	CACAGUG	ENST00000397981.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000545011.1|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397983.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7 	ENST00000397979.3|MAP2K7|ENSG00000076984.13|mitogen-activated protein kinase kinase 7
hg19_v2_chr19_-_47249679_47249737	0.213357	CACAGUG	ENST00000263280.6|STRN4|ENSG00000090372.10|striatin, calmodulin binding protein 4
hg19_v2_chr9_-_110251836_110251927	0.213225	CACAGUG	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr8_+_22437965_22438003	0.212132	CACAGUG	ENST00000409141.1|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique) 	ENST00000265810.4|PDLIM2|ENSG00000120913.19|PDZ and LIM domain 2 (mystique)
hg19_v2_chr1_+_145438469_145438501	0.211978	CACAGUG	ENST00000369317.4|TXNIP|ENSG00000117289.7|thioredoxin interacting protein
hg19_v2_chr6_-_8064567_8064652	0.207949	CACAGUG	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr12_+_132379160_132379201	0.205466	CACAGUG	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr5_-_176981417_176981508	0.203573	CACAGUG	ENST00000514747.1|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000443375.2|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000329540.5|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B
hg19_v2_chr16_+_2587998_2588011	0.203155	CACAGUG	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr3_+_137906109_137906153	0.202167	CACAGUG	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr7_-_81399438_81399514	0.201123	CACAGUG	ENST00000222390.5|HGF|ENSG00000019991.11|hepatocyte growth factor (hepapoietin A; scatter factor)
hg19_v2_chr6_-_166075557_166075588	0.199209	CACAGUG	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr16_-_71758602_71758604	0.197701	CACAGUG	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr2_-_111334678_111334762	0.197031	CACAGUG	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr5_+_152870106_152870188	0.195906	CACAGUG	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr19_+_19496624_19496660	0.195666	CACAGUG	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr3_+_139654018_139654039	0.194984	CACAGUG	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr17_+_38375574_38375615	0.194467	CACAGUG	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr2_-_178128528_178128574	0.190889	CACAGUG	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr17_-_8534067_8534088	0.190715	CACAGUG	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr2_+_30454390_30454409	0.18927	CACAGUG	ENST00000395323.3|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000406087.1|LBH|ENSG00000213626.7|limb bud and heart development 	ENST00000404397.1|LBH|ENSG00000213626.7|limb bud and heart development
hg19_v2_chr10_+_104678032_104678094	0.184811	CACAGUG	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr3_-_79068594_79068627	0.179094	CACAGUG	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr14_+_100259666_100259685	0.176389	CACAGUG	ENST00000262233.6|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1 	ENST00000334192.4|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr2_-_240322643_240322661	0.176138	CACAGUG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr16_-_402639_402707	0.175873	CACAGUG	ENST00000262320.3|AXIN1|ENSG00000103126.10|axin 1
hg19_v2_chr1_+_64239657_64239724	0.174308	CACAGUG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr3_+_132136331_132136378	0.173678	CACAGUG	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr12_-_47219733_47219785	0.172302	CACAGUG	ENST00000547477.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000447411.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000266579.4|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4
hg19_v2_chr3_-_98620500_98620547	0.171424	CACAGUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr17_+_15848231_15848231	0.171136	CACAGUG	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr15_+_73344791_73344900	0.170072	CACAGUG	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr3_+_122785895_122786001	0.170041	CACAGUG	ENST00000316218.7|PDIA5|ENSG00000065485.13|protein disulfide isomerase family A, member 5
hg19_v2_chr21_-_36260980_36261011	0.167368	CACAGUG	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chrX_+_68725084_68725084	0.165278	CACAGUG	ENST00000252338.4|FAM155B|ENSG00000130054.4|family with sequence similarity 155, member B
hg19_v2_chr9_-_23821273_23821313	0.164027	CACAGUG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr10_+_31608054_31608156	0.16372	CACAGUG	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr14_-_90085458_90085557	0.160975	CACAGUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr17_-_78450398_78450413	0.159132	CACAGUG	ENST00000306773.4|NPTX1|ENSG00000171246.5|neuronal pentraxin I
hg19_v2_chr3_-_53381539_53381654	0.158774	CACAGUG	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr12_-_88974236_88974256	0.156742	CACAGUG	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr11_+_120107344_120107351	0.156086	CACAGUG	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr16_+_66914264_66914516	0.154085	CACAGUG	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr17_+_45608430_45608490	0.153748	CACAGUG	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chr20_-_48532019_48532045	0.152624	CACAGUG	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr5_-_157002775_157002790	0.151228	CACAGUG	ENST00000257527.4|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr18_+_19749386_19749404	0.149811	CACAGUG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr17_+_61086917_61086921	0.149301	CACAGUG	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr11_-_102323489_102323576	0.146549	CACAGUG	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr14_+_56585048_56585150	0.144954	CACAGUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr19_+_18794470_18794512	0.143025	CACAGUG	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr2_+_192542850_192542872	0.142127	CACAGUG	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr18_-_61089665_61089733	0.139894	CACAGUG	ENST00000238497.5|VPS4B|ENSG00000119541.5|vacuolar protein sorting 4 homolog B (S. cerevisiae)
hg19_v2_chr17_+_45727204_45727220	0.137761	CACAGUG	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr5_-_38595498_38595514	0.136046	CACAGUG	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr22_-_28197486_28197544	0.135913	CACAGUG	ENST00000302326.4|MN1|ENSG00000169184.5|meningioma (disrupted in balanced translocation) 1
hg19_v2_chr16_-_53737795_53737850	0.134489	CACAGUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr1_-_92351769_92351787	0.134264	CACAGUG	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr11_-_129062093_129062184	0.131984	CACAGUG	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr19_+_45973120_45973171	0.131924	CACAGUG	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr2_+_170440844_170440897	0.130501	CACAGUG	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr13_-_67804445_67804475	0.127409	CACAGUG	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr1_+_229406847_229406935	0.125822	CACAGUG	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr9_-_135819987_135820020	0.125554	CACAGUG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr11_-_27528301_27528336	0.125401	CACAGUG	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr11_+_33278811_33279133	0.122325	CACAGUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr17_+_38474489_38474548	0.121796	CACAGUG	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr3_+_156008809_156008839	0.117876	CACAGUG	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr3_-_170303845_170303869	0.116876	CACAGUG	ENST00000231706.5|SLC7A14|ENSG00000013293.5|solute carrier family 7, member 14
hg19_v2_chr19_+_41222998_41223057	0.114893	CACAGUG	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr2_+_54683419_54683442	0.113266	CACAGUG	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr9_+_132934835_132934857	0.113057	CACAGUG	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr19_+_18942720_18942748	0.112591	CACAGUG	ENST00000262803.5|UPF1|ENSG00000005007.8|UPF1 regulator of nonsense transcripts homolog (yeast)
hg19_v2_chr1_+_110453203_110453255	0.111959	CACAGUG	ENST00000357302.4|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000344188.5|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage) 	ENST00000329608.6|CSF1|ENSG00000184371.9|colony stimulating factor 1 (macrophage)
hg19_v2_chr17_-_2304365_2304412	0.111458	CACAGUG	ENST00000575394.1|MNT|ENSG00000070444.10|MAX network transcriptional repressor 	ENST00000174618.4|MNT|ENSG00000070444.10|MAX network transcriptional repressor
hg19_v2_chr4_-_107957454_107957475	0.108151	CACAGUG	ENST00000285311.3|DKK2|ENSG00000155011.4|dickkopf WNT signaling pathway inhibitor 2
hg19_v2_chr4_+_71587669_71587752	0.106029	CACAGUG	ENST00000381006.3|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3 	ENST00000226328.4|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr17_-_50237343_50237373	0.10481	CACAGUG	ENST00000575181.1|CA10|ENSG00000154975.9|carbonic anhydrase X 	ENST00000570565.1|CA10|ENSG00000154975.9|carbonic anhydrase X
hg19_v2_chr3_-_119813264_119813272	0.0994161	CACAGUG	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr5_-_180242534_180242567	0.0991906	CACAGUG	ENST00000333055.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 	ENST00000513431.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr17_-_58603568_58603610	0.098245	CACAGUG	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr10_+_104474207_104474297	0.0975629	CACAGUG	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr2_-_71454185_71454242	0.0959795	CACAGUG	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr1_+_54519242_54519317	0.0901188	CACAGUG	ENST00000234827.1|TCEANC2|ENSG00000116205.6|transcription elongation factor A (SII) N-terminal and central domain containing 2
hg19_v2_chr22_-_37099555_37099603	0.0893304	CACAGUG	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr2_+_28615669_28615733	0.0890824	CACAGUG	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr1_-_157015162_157015162	0.0876128	CACAGUG	ENST00000368194.3|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr15_+_84904525_84904525	0.0851961	CACAGUG	ENST00000510439.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr9_-_100395756_100395962	0.080573	CACAGUG	ENST00000341170.4|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 	ENST00000354801.2|TSTD2|ENSG00000136925.10|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
hg19_v2_chr1_+_36396677_36396749	0.0804795	CACAGUG	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr4_-_39640700_39640712	0.0774483	CACAGUG	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr9_+_129089088_129089163	0.0767879	CACAGUG	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr2_-_27718052_27718127	0.0765518	CACAGUG	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr3_-_136471204_136471249	0.0755218	CACAGUG	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr20_-_61569227_61569287	0.0750307	CACAGUG	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr1_-_21671968_21672009	0.0720193	CACAGUG	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr10_+_111967345_111967442	0.0714832	CACAGUG	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_+_11866207_11866268	0.0697971	CACAGUG	ENST00000312413.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000346436.6|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr7_-_43965937_43966015	0.0667934	CACAGUG	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr2_-_50574856_50574892	0.0665987	CACAGUG	ENST00000342183.5|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr17_-_3461092_3461126	0.066507	CACAGUG	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr17_-_4167142_4167281	0.066133	CACAGUG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr7_+_97736197_97736211	0.0657598	CACAGUG	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr17_-_7137857_7137869	0.0648162	CACAGUG	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr12_+_79258547_79258607	0.0629623	CACAGUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr4_+_5053162_5053184	0.0626006	CACAGUG	ENST00000282908.5|STK32B|ENSG00000152953.8|serine/threonine kinase 32B
hg19_v2_chr4_+_85504075_85504132	0.0619606	CACAGUG	ENST00000295887.5|CDS1|ENSG00000163624.5|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
hg19_v2_chr15_+_92396920_92396987	0.0617401	CACAGUG	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr17_+_25799008_25799036	0.0598588	CACAGUG	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr17_-_73775839_73775868	0.0596871	CACAGUG	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr11_+_118401706_118401803	0.0595808	CACAGUG	ENST00000411589.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000442938.2|TMEM25|ENSG00000149582.11|transmembrane protein 25 	ENST00000359862.4|TMEM25|ENSG00000149582.11|transmembrane protein 25
hg19_v2_chr6_+_114178512_114178586	0.0594842	CACAGUG	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr1_-_108507631_108507809	0.0562103	CACAGUG	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr19_+_38397839_38397932	0.0544647	CACAGUG	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr4_-_23891693_23891706	0.054187	CACAGUG	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr17_+_72983674_72983768	0.0528061	CACAGUG	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr6_-_80657292_80657301	0.0520562	CACAGUG	ENST00000369816.4|ELOVL4|ENSG00000118402.5|ELOVL fatty acid elongase 4
hg19_v2_chr9_+_133454943_133455020	0.051378	CACAGUG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr4_+_170541660_170541677	0.0512564	CACAGUG	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr12_+_103981044_103981061	0.0502502	CACAGUG	ENST00000388887.2|STAB2|ENSG00000136011.10|stabilin 2
hg19_v2_chr6_+_7107999_7108054	0.0472852	CACAGUG	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr20_+_34359905_34359991	0.0440408	CACAGUG	ENST00000374012.3|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000439301.1|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000339089.6|PHF20|ENSG00000025293.11|PHD finger protein 20 	ENST00000374000.4|PHF20|ENSG00000025293.11|PHD finger protein 20
hg19_v2_chr16_-_68482440_68482591	0.0439277	CACAGUG	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr12_-_120687948_120687971	0.0429884	CACAGUG	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr3_-_116164306_116164380	0.0421374	CACAGUG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr10_+_60094735_60094749	0.0414801	CACAGUG	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr10_-_61666267_61666414	0.0383537	CACAGUG	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr2_+_108443388_108443393	0.0366694	CACAGUG	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chr2_+_24714729_24714927	0.0360429	CACAGUG	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr9_-_130829588_130829636	0.034272	CACAGUG	ENST00000373078.4|NAIF1|ENSG00000171169.8|nuclear apoptosis inducing factor 1
hg19_v2_chr17_-_7518145_7518234	0.0337746	CACAGUG	ENST00000250113.7|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2 	ENST00000571597.1|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2
hg19_v2_chr2_+_119981384_119981446	0.0331133	CACAGUG	ENST00000393108.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000354888.5|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000450943.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393110.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393106.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000409811.1|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393107.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase
hg19_v2_chr2_-_47798044_47798132	0.0318592	CACAGUG	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr10_+_69644404_69644427	0.0317898	CACAGUG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr2_-_11606275_11606289	0.031693	CACAGUG	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr17_-_37607497_37607539	0.0302616	CACAGUG	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr16_-_18937726_18937776	0.0293638	CACAGUG	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr7_-_27213893_27213954	0.0288136	CACAGUG	ENST00000283921.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr1_-_217804377_217804446	0.0286499	CACAGUG	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr15_-_63674218_63674360	0.0279923	CACAGUG	ENST00000178638.3|CA12|ENSG00000074410.9|carbonic anhydrase XII
hg19_v2_chr17_-_42143963_42144103	0.0272477	CACAGUG	ENST00000585388.1|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae) 	ENST00000293406.3|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae)
hg19_v2_chr11_-_74109422_74109518	0.0268461	CACAGUG	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr5_+_137774706_137774806	0.0266068	CACAGUG	ENST00000378339.2|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000254901.5|REEP2|ENSG00000132563.11|receptor accessory protein 2 	ENST00000506158.1|REEP2|ENSG00000132563.11|receptor accessory protein 2
hg19_v2_chr16_-_58663720_58663790	0.0251082	CACAGUG	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr14_-_100070363_100070467	0.0246679	CACAGUG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chrX_+_133507327_133507386	0.0244457	CACAGUG	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr1_+_184356188_184356200	0.0243085	CACAGUG	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr17_+_45973516_45973618	0.0239005	CACAGUG	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr2_-_197791441_197791525	0.0237811	CACAGUG	ENST00000409475.1|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000354764.4|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000374738.3|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1
hg19_v2_chr6_+_133562472_133562556	0.0233973	CACAGUG	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chrX_+_100474711_100474758	0.0232818	CACAGUG	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr19_-_43969796_43969813	0.0229109	CACAGUG	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr17_+_47865917_47866068	0.0226165	CACAGUG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr1_+_162531294_162531332	0.0218307	CACAGUG	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr2_-_54087066_54087297	0.021747	CACAGUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr12_-_117628333_117628339	0.0209779	CACAGUG	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr17_+_25621102_25621157	0.0197718	CACAGUG	ENST00000581440.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000262394.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583742.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000579733.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583193.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000581185.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000427287.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000348811.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1
hg19_v2_chr8_-_74791051_74791145	0.0197555	CACAGUG	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr19_+_33463127_33463195	0.0190052	CACAGUG	ENST00000589646.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000588258.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40 	ENST00000590179.1|C19orf40|ENSG00000131944.5|chromosome 19 open reading frame 40
hg19_v2_chr12_+_70760056_70760085	0.0189453	CACAGUG	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr9_+_131549483_131549606	0.0186461	CACAGUG	ENST00000372648.5|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13 	ENST00000539497.1|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr12_-_42538657_42538720	0.0182086	CACAGUG	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr22_+_41956767_41956852	0.017078	CACAGUG	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr4_+_699537_699600	0.0168097	CACAGUG	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr13_-_111214015_111214080	0.0162524	CACAGUG	ENST00000267328.3|RAB20|ENSG00000139832.3|RAB20, member RAS oncogene family
hg19_v2_chr6_+_163835669_163835693	0.0147625	CACAGUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr2_+_181845298_181845378	0.0147158	CACAGUG	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr10_+_75757863_75757897	0.0145573	CACAGUG	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr4_+_6784401_6784510	0.0123713	CACAGUG	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr14_-_92572894_92572965	0.00986934	CACAGUG	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr2_-_119605253_119605264	0.00924096	CACAGUG	ENST00000295206.6|EN1|ENSG00000163064.6|engrailed homeobox 1
hg19_v2_chr1_+_215256467_215256622	0.00855387	CACAGUG	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr20_+_30795664_30795743	0.0084546	CACAGUG	ENST00000375749.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000375730.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000539210.1|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1
hg19_v2_chr3_+_193310918_193310934	0.00840399	CACAGUG	ENST00000361908.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000392438.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361510.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361715.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361828.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361150.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant)
hg19_v2_chr2_+_135676381_135676435	0.00736053	CACAGUG	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr1_+_206557366_206557368	0.00712982	CACAGUG	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr20_-_48729670_48729694	0.00704222	CACAGUG	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr8_-_8751068_8751158	0.00683608	CACAGUG	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr1_+_97187318_97187380	0.00644162	CACAGUG	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr14_+_73603126_73603255	0.00553904	CACAGUG	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr17_-_56084578_56084707	0.00546169	CACAGUG	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr13_-_103053946_103054124	0.00535279	CACAGUG	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr18_+_32073253_32073339	0.0044143	CACAGUG	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr17_-_43568062_43568110	0.00393816	CACAGUG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr6_+_117002339_117002400	0.00217272	CACAGUG	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr17_+_37026106_37026123	0.00195025	CACAGUG	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr11_-_82611448_82611639	0.00192153	CACAGUG	ENST00000393399.2|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C) 	ENST00000313010.3|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C)
hg19_v2_chr17_+_60536002_60536040	0.00177895	CACAGUG	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr4_+_20255123_20255213	0.000722314	CACAGUG	ENST00000504154.1|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila) 	ENST00000273739.5|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila)
hg19_v2_chr2_-_200322723_200322819	0.000214747	CACAGUG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
