hg19_v2_chr9_-_14314066_14314075	0.325609	CAGUCCA	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr1_-_20812690_20812763	0.275782	CAGUCCA	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr4_-_177713788_177713881	0.262076	CAGUCCA	ENST00000280193.2|VEGFC|ENSG00000150630.2|vascular endothelial growth factor C
hg19_v2_chr1_-_17304771_17304825	0.21673	CAGUCCA	ENST00000375534.3|MFAP2|ENSG00000117122.9|microfibrillar-associated protein 2
hg19_v2_chr20_-_23066953_23066977	0.152169	CAGUCCA	ENST00000246006.4|CD93|ENSG00000125810.9|CD93 molecule
hg19_v2_chr19_-_43969796_43969813	0.149473	CAGUCCA	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr6_-_10415470_10415508	0.141346	CAGUCCA	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr20_+_6748311_6748352	0.126962	CAGUCCA	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr8_-_82395461_82395498	0.123058	CAGUCCA	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr19_+_48281842_48281853	0.112108	CAGUCCA	ENST00000509570.2|SEPW1|ENSG00000178980.10|selenoprotein W, 1
hg19_v2_chr6_+_76458909_76458934	0.108155	CAGUCCA	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr18_-_500692_500748	0.0981147	CAGUCCA	ENST00000400256.3|COLEC12|ENSG00000158270.10|collectin sub-family member 12
hg19_v2_chr2_+_85360499_85360598	0.0875423	CAGUCCA	ENST00000282111.3|TCF7L1|ENSG00000152284.4|transcription factor 7-like 1 (T-cell specific, HMG-box)
hg19_v2_chr9_+_103204553_103204560	0.0863613	CAGUCCA	ENST00000502978.1|MSANTD3-TMEFF1|ENSG00000251349.3|MSANTD3-TMEFF1 readthrough 	ENST00000334943.6|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr1_+_155290677_155290753	0.0818181	CAGUCCA	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr4_+_124320665_124320702	0.0814869	CAGUCCA	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr15_+_96873921_96873946	0.078805	CAGUCCA	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr10_-_33246722_33246830	0.0724405	CAGUCCA	ENST00000437302.1|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 	ENST00000396033.2|ITGB1|ENSG00000150093.14|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
hg19_v2_chr3_-_79068594_79068627	0.0638163	CAGUCCA	ENST00000436010.2|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr8_-_93115445_93115462	0.0618902	CAGUCCA	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr14_+_58666824_58666902	0.059577	CAGUCCA	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr2_-_55237484_55237585	0.0582983	CAGUCCA	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr9_+_103235365_103235419	0.0578505	CAGUCCA	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr2_+_219081817_219081933	0.0565899	CAGUCCA	ENST00000315717.5|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000420104.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa 	ENST00000295685.10|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr19_-_14629224_14629262	0.0489408	CAGUCCA	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr11_-_79151695_79151710	0.0487858	CAGUCCA	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chrX_-_134049262_134049297	0.0482027	CAGUCCA	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr14_+_23775971_23776000	0.0460506	CAGUCCA	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr19_+_13049413_13049459	0.0455532	CAGUCCA	ENST00000316448.5|CALR|ENSG00000179218.9|calreticulin 	ENST00000588454.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr14_+_65171099_65171210	0.0451684	CAGUCCA	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr16_-_79634595_79634620	0.0443122	CAGUCCA	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr1_-_150979333_150979384	0.0428107	CAGUCCA	ENST00000312210.5|FAM63A|ENSG00000143409.11|family with sequence similarity 63, member A
hg19_v2_chr5_+_92919043_92919082	0.0422787	CAGUCCA	ENST00000327111.3|NR2F1|ENSG00000175745.7|nuclear receptor subfamily 2, group F, member 1
hg19_v2_chr1_+_201979645_201979721	0.0422641	CAGUCCA	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr5_-_148930960_148931013	0.0381201	CAGUCCA	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr11_-_129062093_129062184	0.0380499	CAGUCCA	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr11_-_118966167_118966182	0.0363805	CAGUCCA	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr15_+_90931450_90931544	0.0358462	CAGUCCA	ENST00000268182.5|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560738.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1 	ENST00000560418.1|IQGAP1|ENSG00000140575.8|IQ motif containing GTPase activating protein 1
hg19_v2_chr19_+_7598890_7599090	0.0338421	CAGUCCA	ENST00000221249.6|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601668.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6 	ENST00000601001.1|PNPLA6|ENSG00000032444.11|patatin-like phospholipase domain containing 6
hg19_v2_chr16_-_31147020_31147083	0.0334785	CAGUCCA	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr13_-_50367057_50367142	0.0321532	CAGUCCA	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr20_+_306221_306239	0.0314127	CAGUCCA	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr1_-_41131326_41131400	0.0313307	CAGUCCA	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr15_-_65809581_65809617	0.031307	CAGUCCA	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr17_+_36508111_36508128	0.0298518	CAGUCCA	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr6_-_90529418_90529528	0.0290076	CAGUCCA	ENST00000439638.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000369393.3|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast) 	ENST00000428876.1|MDN1|ENSG00000112159.7|MDN1, midasin homolog (yeast)
hg19_v2_chr3_-_122233723_122233797	0.0287359	CAGUCCA	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr17_+_38375574_38375615	0.0283049	CAGUCCA	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chrX_+_100474711_100474758	0.0279401	CAGUCCA	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr8_+_22409193_22409215	0.027278	CAGUCCA	ENST00000240123.7|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chrX_+_28605516_28605608	0.0264473	CAGUCCA	ENST00000378993.1|IL1RAPL1|ENSG00000169306.5|interleukin 1 receptor accessory protein-like 1
hg19_v2_chr22_-_39096661_39096681	0.0262878	CAGUCCA	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr9_+_35749203_35749350	0.0250438	CAGUCCA	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr17_-_73851285_73851501	0.0240187	CAGUCCA	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr19_+_45973120_45973171	0.023417	CAGUCCA	ENST00000592811.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000586615.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr3_-_11762202_11762226	0.0230739	CAGUCCA	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr17_+_2240775_2240812	0.0227613	CAGUCCA	ENST00000268989.3|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2 	ENST00000426855.2|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chr17_+_27055798_27055828	0.0220897	CAGUCCA	ENST00000268766.6|NEK8|ENSG00000160602.9|NIMA-related kinase 8
hg19_v2_chr12_+_57984965_57985059	0.0217064	CAGUCCA	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr19_-_46296011_46296061	0.0216904	CAGUCCA	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr1_+_36273743_36273773	0.0210893	CAGUCCA	ENST00000373210.3|AGO4|ENSG00000134698.10|argonaute RISC catalytic component 4
hg19_v2_chr4_-_100871506_100871545	0.020551	CAGUCCA	ENST00000296417.5|H2AFZ|ENSG00000164032.7|H2A histone family, member Z
hg19_v2_chr3_-_178984759_178984790	0.0203166	CAGUCCA	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr4_+_184020398_184020463	0.0200509	CAGUCCA	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr6_-_159421198_159421254	0.0196639	CAGUCCA	ENST00000252655.1|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000297262.3|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas) 	ENST00000367069.2|RSPH3|ENSG00000130363.7|radial spoke 3 homolog (Chlamydomonas)
hg19_v2_chr21_-_36260980_36261011	0.0195087	CAGUCCA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr11_+_64126614_64126665	0.0190003	CAGUCCA	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr7_+_73242069_73242082	0.0185528	CAGUCCA	ENST00000435050.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr19_+_47421933_47421933	0.0167661	CAGUCCA	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr12_-_96794143_96794264	0.0161888	CAGUCCA	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr15_+_62853562_62853614	0.0155663	CAGUCCA	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr2_-_131850951_131851065	0.0149883	CAGUCCA	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr17_-_41977964_41978013	0.0144355	CAGUCCA	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chrX_+_153639856_153639943	0.0139633	CAGUCCA	ENST00000426834.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000369790.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000454722.1|TAZ|ENSG00000102125.11|tafazzin 	ENST00000350743.4|TAZ|ENSG00000102125.11|tafazzin 	ENST00000299328.5|TAZ|ENSG00000102125.11|tafazzin 	ENST00000351413.4|TAZ|ENSG00000102125.11|tafazzin
hg19_v2_chr1_-_35658736_35658754	0.0133512	CAGUCCA	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr15_+_49170083_49170111	0.0128961	CAGUCCA	ENST00000530028.2|EID1|ENSG00000255302.3|EP300 interacting inhibitor of differentiation 1
hg19_v2_chr11_-_118305921_118305921	0.0126824	CAGUCCA	ENST00000532619.1|RP11-770J1.4|ENSG00000255384.1|RP11-770J1.4
hg19_v2_chr1_+_153700518_153700567	0.012484	CAGUCCA	ENST00000318967.2|INTS3|ENSG00000143624.9|integrator complex subunit 3 	ENST00000456435.1|INTS3|ENSG00000143624.9|integrator complex subunit 3 	ENST00000435409.2|INTS3|ENSG00000143624.9|integrator complex subunit 3
hg19_v2_chr11_+_125439298_125439385	0.012241	CAGUCCA	ENST00000278903.6|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000343678.4|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000524723.1|EI24|ENSG00000149547.10|etoposide induced 2.4 	ENST00000527842.2|EI24|ENSG00000149547.10|etoposide induced 2.4
hg19_v2_chrX_+_48554986_48555164	0.0121132	CAGUCCA	ENST00000376687.3|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila) 	ENST00000453214.2|SUV39H1|ENSG00000101945.12|suppressor of variegation 3-9 homolog 1 (Drosophila)
hg19_v2_chrX_+_16804544_16804613	0.0112144	CAGUCCA	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr9_-_104145795_104145806	0.0109411	CAGUCCA	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr8_-_30670384_30670394	0.0109344	CAGUCCA	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr12_+_120933904_120933923	0.0107374	CAGUCCA	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr5_+_179921430_179921461	0.0101972	CAGUCCA	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr22_+_45559722_45559881	0.00995243	CAGUCCA	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr9_+_82186872_82186898	0.00951769	CAGUCCA	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr17_-_46671323_46671323	0.00903257	CAGUCCA	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr6_-_33168391_33168465	0.00887236	CAGUCCA	ENST00000374685.4|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000413614.2|RXRB|ENSG00000204231.6|retinoid X receptor, beta 	ENST00000374680.3|RXRB|ENSG00000204231.6|retinoid X receptor, beta
hg19_v2_chr2_+_27440229_27440280	0.00839729	CAGUCCA	ENST00000264705.4|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENST00000403525.1|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v2_chr2_-_69870835_69870853	0.00812399	CAGUCCA	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr17_-_48943706_48943723	0.0080461	CAGUCCA	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr11_-_118047376_118047388	0.00756773	CAGUCCA	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr8_+_67579807_67579887	0.00720753	CAGUCCA	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chrX_-_48824793_48824793	0.00719801	CAGUCCA	ENST00000376477.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr2_+_61404624_61404666	0.00701086	CAGUCCA	ENST00000394457.3|AHSA2|ENSG00000173209.18|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
hg19_v2_chr1_-_115300592_115300648	0.00641587	CAGUCCA	ENST00000261443.5|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000534699.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000339438.6|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000529046.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000525970.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000369530.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding 	ENST00000530886.1|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
hg19_v2_chr9_+_132565418_132565444	0.00509716	CAGUCCA	ENST00000259339.2|TOR1B|ENSG00000136816.11|torsin family 1, member B (torsin B)
hg19_v2_chr6_-_114292449_114292474	0.00490761	CAGUCCA	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr8_+_145515263_145515299	0.00461338	CAGUCCA	ENST00000528838.1|HSF1|ENSG00000185122.6|heat shock transcription factor 1
hg19_v2_chr9_-_16870704_16870841	0.00456792	CAGUCCA	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr2_-_225450013_225450068	0.00420888	CAGUCCA	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chrX_+_69664706_69664819	0.00420593	CAGUCCA	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr16_-_18937726_18937776	0.00413444	CAGUCCA	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr12_+_130646999_130647019	0.0039236	CAGUCCA	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr19_-_19739007_19739051	0.00380552	CAGUCCA	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr12_+_53848505_53848532	0.00361429	CAGUCCA	ENST00000552819.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000455667.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr13_+_88324870_88324870	0.00280601	CAGUCCA	ENST00000325089.6|SLITRK5|ENSG00000165300.6|SLIT and NTRK-like family, member 5
hg19_v2_chr8_+_26149007_26149061	0.00244142	CAGUCCA	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr3_-_128902729_128902753	0.0021681	CAGUCCA	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr1_-_213189108_213189154	0.00183009	CAGUCCA	ENST00000535388.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chrX_+_133507327_133507386	0.00167889	CAGUCCA	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr17_-_7120525_7120666	0.00122158	CAGUCCA	ENST00000447163.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000399506.2|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila) 	ENST00000302955.6|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
hg19_v2_chr13_-_45915221_45915347	0.00111084	CAGUCCA	ENST00000309246.5|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379060.4|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379055.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000527226.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1 	ENST00000379056.1|TPT1|ENSG00000133112.12|tumor protein, translationally-controlled 1
hg19_v2_chr1_-_146644122_146644176	0.000893938	CAGUCCA	ENST00000254101.3|PRKAB2|ENSG00000131791.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg19_v2_chr14_-_64010046_64010107	0.000706868	CAGUCCA	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
