hg19_v2_chr11_+_35201826_35201855	4.09471	FOXJ2	ENST00000531873.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr7_-_80548667_80548688	3.59517	FOXJ2	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr12_-_8815215_8815298	2.37203	FOXJ2	ENST00000544889.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000543369.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr12_-_8815299_8815331	2.35648	FOXJ2	ENST00000535336.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr13_-_38172863_38172981	2.29153	FOXJ2	ENST00000541481.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379743.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379742.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379749.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000541179.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379747.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor
hg19_v2_chr18_-_21852143_21852205	2.22006	FOXJ2	ENST00000399443.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr15_+_32933866_32933963	1.63036	FOXJ2	ENST00000300175.4|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000413748.2|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000494364.1|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000497208.1|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein)
hg19_v2_chr12_-_8815404_8815438	1.5443	FOXJ2	ENST00000359478.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000396549.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr4_+_89299885_89299897	1.36668	FOXJ2	ENST00000380265.5|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 	ENST00000273960.3|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
hg19_v2_chr4_+_89299994_89300015	1.24179	FOXJ2	ENST00000264346.7|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
hg19_v2_chr6_-_56507586_56507794	1.19925	FOXJ2	ENST00000439203.1|DST|ENSG00000151914.13|dystonin 	ENST00000518935.1|DST|ENSG00000151914.13|dystonin 	ENST00000446842.2|DST|ENSG00000151914.13|dystonin 	ENST00000370765.6|DST|ENSG00000151914.13|dystonin 	ENST00000244364.6|DST|ENSG00000151914.13|dystonin
hg19_v2_chr4_-_90757364_90757396	1.15547	FOXJ2	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr12_-_91574142_91574289	0.98756	FOXJ2	ENST00000547937.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr12_-_53074182_53074197	0.956233	FOXJ2	ENST00000252244.3|KRT1|ENSG00000167768.4|keratin 1
hg19_v2_chr2_-_85641162_85641197	0.948829	FOXJ2	ENST00000447219.2|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like 	ENST00000409670.1|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like 	ENST00000409724.1|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like
hg19_v2_chr1_-_94079648_94079671	0.924003	FOXJ2	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr1_+_223889285_223889306	0.895976	FOXJ2	ENST00000433674.2|CAPN2|ENSG00000162909.13|calpain 2, (m/II) large subunit
hg19_v2_chr15_+_67430339_67430366	0.875136	FOXJ2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr17_-_46115122_46115173	0.840736	FOXJ2	ENST00000006101.4|COPZ2|ENSG00000005243.5|coatomer protein complex, subunit zeta 2
hg19_v2_chr3_+_128444994_128445044	0.839006	FOXJ2	ENST00000482525.1|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr12_+_79258444_79258455	0.826486	FOXJ2	ENST00000261205.4|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr4_-_90756769_90756846	0.751849	FOXJ2	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr8_-_95274536_95274578	0.694744	FOXJ2	ENST00000297596.2|GEM|ENSG00000164949.3|GTP binding protein overexpressed in skeletal muscle 	ENST00000396194.2|GEM|ENSG00000164949.3|GTP binding protein overexpressed in skeletal muscle
hg19_v2_chr12_-_8815477_8815490	0.6831	FOXJ2	ENST00000433590.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr8_-_80993010_80993073	0.661802	FOXJ2	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr16_+_3068393_3068446	0.62489	FOXJ2	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr3_+_128444965_128444985	0.620096	FOXJ2	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr8_+_101170257_101170296	0.599739	FOXJ2	ENST00000251809.3|SPAG1|ENSG00000104450.8|sperm associated antigen 1
hg19_v2_chr14_+_90863364_90863400	0.523022	FOXJ2	ENST00000447653.3|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta) 	ENST00000553542.1|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr7_+_77469439_77469497	0.502924	FOXJ2	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr12_+_6833237_6833248	0.499959	FOXJ2	ENST00000229251.3|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000539735.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000538410.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A
hg19_v2_chr6_-_99842041_99842087	0.481477	FOXJ2	ENST00000254759.3|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase 	ENST00000369242.1|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase
hg19_v2_chr1_-_217804377_217804446	0.477624	FOXJ2	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr4_-_164534657_164534701	0.472268	FOXJ2	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr8_-_54755789_54755876	0.461983	FOXJ2	ENST00000359530.2|ATP6V1H|ENSG00000047249.12|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
hg19_v2_chrX_-_107682702_107682722	0.45898	FOXJ2	ENST00000372216.4|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr1_+_43855560_43855640	0.449591	FOXJ2	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr21_-_27423339_27423352	0.416737	FOXJ2	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr14_+_90863327_90863356	0.384964	FOXJ2	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr7_-_102283238_102283238	0.377306	FOXJ2	ENST00000340457.8|UPK3BL|ENSG00000267368.1|uroplakin 3B-like
hg19_v2_chr2_+_210517895_210518021	0.373962	FOXJ2	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chrX_+_55744166_55744222	0.339828	FOXJ2	ENST00000374941.4|RRAGB|ENSG00000083750.8|Ras-related GTP binding B 	ENST00000414239.1|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr16_-_30440530_30440614	0.336814	FOXJ2	ENST00000568434.1|DCTPP1|ENSG00000179958.4|dCTP pyrophosphatase 1
hg19_v2_chr3_+_157154578_157154645	0.331143	FOXJ2	ENST00000295927.3|PTX3|ENSG00000163661.3|pentraxin 3, long
hg19_v2_chr1_-_240775447_240775462	0.326761	FOXJ2	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr3_-_64009102_64009236	0.326537	FOXJ2	ENST00000478185.1|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 	ENST00000482510.1|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 	ENST00000497323.1|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 	ENST00000492933.1|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 	ENST00000295901.4|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr1_+_28879588_28879624	0.305141	FOXJ2	ENST00000373830.3|TRNAU1AP|ENSG00000180098.5|tRNA selenocysteine 1 associated protein 1
hg19_v2_chr6_+_31462658_31462717	0.304246	FOXJ2	ENST00000538442.1|MICB|ENSG00000204516.5|MHC class I polypeptide-related sequence B
hg19_v2_chrX_+_55744228_55744318	0.300017	FOXJ2	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr1_+_146373546_146373600	0.289932	FOXJ2	ENST00000446760.2|NBPF12|ENSG00000186275.7|neuroblastoma breakpoint family, member 12
hg19_v2_chr12_-_96429423_96429439	0.280059	FOXJ2	ENST00000228740.2|LTA4H|ENSG00000111144.5|leukotriene A4 hydrolase
hg19_v2_chr3_-_64009658_64009687	0.279512	FOXJ2	ENST00000394431.2|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr22_-_39268308_39268319	0.255841	FOXJ2	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr8_+_30244580_30244749	0.243207	FOXJ2	ENST00000523115.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000519647.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr13_-_37573432_37573504	0.227544	FOXJ2	ENST00000413537.2|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000443765.1|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000239891.3|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase
hg19_v2_chr10_-_36813162_36813162	0.215717	FOXJ2	ENST00000440465.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr19_+_13134772_13134846	0.201619	FOXJ2	ENST00000587760.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000585575.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr1_-_38019878_38019905	0.200405	FOXJ2	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr12_-_57941004_57941114	0.192418	FOXJ2	ENST00000550750.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000548249.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50)
hg19_v2_chr1_+_162602244_162602289	0.191941	FOXJ2	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr4_+_57845024_57845037	0.172631	FOXJ2	ENST00000431623.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000441246.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chr15_-_56757329_56757342	0.167747	FOXJ2	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr4_+_68424434_68424453	0.166073	FOXJ2	ENST00000265404.2|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1 	ENST00000396225.1|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1
hg19_v2_chr8_+_85095769_85095793	0.163733	FOXJ2	ENST00000518566.1|RALYL|ENSG00000184672.7|RALY RNA binding protein-like
hg19_v2_chr1_-_43855479_43855486	0.15951	FOXJ2	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr12_+_21679220_21679252	0.159197	FOXJ2	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr12_-_68553512_68553528	0.157032	FOXJ2	ENST00000229135.3|IFNG|ENSG00000111537.4|interferon, gamma
hg19_v2_chr3_-_49131788_49131812	0.155547	FOXJ2	ENST00000395443.2|QRICH1|ENSG00000198218.6|glutamine-rich 1 	ENST00000411682.1|QRICH1|ENSG00000198218.6|glutamine-rich 1
hg19_v2_chr14_+_52456193_52456320	0.148091	FOXJ2	ENST00000261700.3|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr2_-_55237484_55237585	0.147632	FOXJ2	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr9_-_134615443_134615521	0.132603	FOXJ2	ENST00000372195.1|RAPGEF1|ENSG00000107263.14|Rap guanine nucleotide exchange factor (GEF) 1
hg19_v2_chr6_+_30539153_30539255	0.131027	FOXJ2	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr1_+_160765884_160765903	0.130073	FOXJ2	ENST00000392203.4|LY9|ENSG00000122224.13|lymphocyte antigen 9
hg19_v2_chrX_+_107683096_107683121	0.128618	FOXJ2	ENST00000328300.6|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5 	ENST00000361603.2|COL4A5|ENSG00000188153.8|collagen, type IV, alpha 5
hg19_v2_chr1_+_160765919_160765928	0.12391	FOXJ2	ENST00000341032.4|LY9|ENSG00000122224.13|lymphocyte antigen 9 	ENST00000368041.2|LY9|ENSG00000122224.13|lymphocyte antigen 9 	ENST00000368040.1|LY9|ENSG00000122224.13|lymphocyte antigen 9
hg19_v2_chr15_+_42697065_42697078	0.122767	FOXJ2	ENST00000565559.1|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr6_-_27858570_27858611	0.122093	FOXJ2	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr19_+_11658655_11658690	0.121518	FOXJ2	ENST00000588935.1|CNN1|ENSG00000130176.3|calponin 1, basic, smooth muscle
hg19_v2_chr2_-_74619152_74619219	0.114594	FOXJ2	ENST00000440727.1|DCTN1|ENSG00000204843.8|dynactin 1 	ENST00000409240.1|DCTN1|ENSG00000204843.8|dynactin 1
hg19_v2_chr1_-_45452240_45452287	0.1143	FOXJ2	ENST00000372183.3|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000372182.4|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000360403.2|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
hg19_v2_chr20_+_32782375_32782385	0.111117	FOXJ2	ENST00000568305.1|ASIP|ENSG00000101440.5|agouti signaling protein
hg19_v2_chr1_+_160765947_160765977	0.102151	FOXJ2	ENST00000263285.6|LY9|ENSG00000122224.13|lymphocyte antigen 9 	ENST00000368039.2|LY9|ENSG00000122224.13|lymphocyte antigen 9
hg19_v2_chr3_+_132036207_132036218	0.101713	FOXJ2	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr1_+_160765860_160765870	0.100381	FOXJ2	ENST00000368037.5|LY9|ENSG00000122224.13|lymphocyte antigen 9
hg19_v2_chr3_+_52017454_52017572	0.0999388	FOXJ2	ENST00000476854.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000476351.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000494103.1|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000404366.2|ACY1|ENSG00000243989.3|aminoacylase 1 	ENST00000469863.1|ACY1|ENSG00000243989.3|aminoacylase 1
hg19_v2_chr18_+_3447572_3447607	0.097535	FOXJ2	ENST00000548489.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr14_+_52456327_52456344	0.0902703	FOXJ2	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr2_+_231921574_231921639	0.0901923	FOXJ2	ENST00000308696.6|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000373635.4|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000440838.1|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000409643.1|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v2_chr15_+_66797627_66797684	0.0888331	FOXJ2	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chrX_-_118699325_118699397	0.0880437	FOXJ2	ENST00000320339.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000371594.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000536133.1|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56
hg19_v2_chr19_+_49866331_49866346	0.0857247	FOXJ2	ENST00000597873.1|DKKL1|ENSG00000104901.2|dickkopf-like 1
hg19_v2_chr1_-_19811132_19811158	0.0835365	FOXJ2	ENST00000433834.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr10_+_95848824_95848852	0.0832978	FOXJ2	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr10_-_105992059_105992138	0.0830026	FOXJ2	ENST00000369720.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000369719.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000357060.3|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000428666.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000278064.2|WDR96|ENSG00000197748.8|WD repeat domain 96
hg19_v2_chr2_+_101591314_101591333	0.0818857	FOXJ2	ENST00000450763.1|NPAS2|ENSG00000170485.12|neuronal PAS domain protein 2
hg19_v2_chr1_+_197237352_197237543	0.07456	FOXJ2	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr11_-_125550764_125550773	0.0741693	FOXJ2	ENST00000527795.1|ACRV1|ENSG00000134940.9|acrosomal vesicle protein 1
hg19_v2_chr8_+_128426535_128426535	0.0741453	FOXJ2	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr6_-_31560729_31560768	0.0707669	FOXJ2	ENST00000340027.5|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376073.4|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376072.3|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3
hg19_v2_chr1_+_145883868_145883868	0.066987	FOXJ2	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr4_-_68749745_68749756	0.0627626	FOXJ2	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr9_-_99417562_99417609	0.061317	FOXJ2	ENST00000375234.3|AAED1|ENSG00000158122.7|AhpC/TSA antioxidant enzyme domain containing 1 	ENST00000446045.1|AAED1|ENSG00000158122.7|AhpC/TSA antioxidant enzyme domain containing 1
hg19_v2_chr19_+_47538560_47538606	0.0598772	FOXJ2	ENST00000439365.2|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1 	ENST00000594670.1|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1
hg19_v2_chr17_+_27046988_27047097	0.0597577	FOXJ2	ENST00000496182.1|RPL23A|ENSG00000198242.9|ribosomal protein L23a
hg19_v2_chr12_-_102874330_102874350	0.0595196	FOXJ2	ENST00000307046.8|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr11_+_63137251_63137280	0.0585105	FOXJ2	ENST00000310969.4|SLC22A9|ENSG00000149742.5|solute carrier family 22 (organic anion transporter), member 9 	ENST00000279178.3|SLC22A9|ENSG00000149742.5|solute carrier family 22 (organic anion transporter), member 9
hg19_v2_chr10_+_105005644_105005644	0.057586	FOXJ2	ENST00000441178.2|RP11-332O19.5|ENSG00000235376.5|ribulose-5-phosphate-3-epimerase-like 1
hg19_v2_chr3_-_109056419_109056438	0.0559256	FOXJ2	ENST00000335658.6|DPPA4|ENSG00000121570.8|developmental pluripotency associated 4
hg19_v2_chr12_-_102874102_102874255	0.0544976	FOXJ2	ENST00000392905.2|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr12_-_102874416_102874425	0.0532815	FOXJ2	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr1_-_27701307_27701322	0.0532545	FOXJ2	ENST00000270879.4|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3 	ENST00000354982.2|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3
hg19_v2_chr12_+_54891495_54891526	0.0499214	FOXJ2	ENST00000293373.6|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr3_-_57233966_57234014	0.0487684	FOXJ2	ENST00000473921.1|HESX1|ENSG00000163666.4|HESX homeobox 1 	ENST00000295934.3|HESX1|ENSG00000163666.4|HESX homeobox 1
hg19_v2_chr15_+_42697018_42697035	0.0476797	FOXJ2	ENST00000397204.4|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr2_+_157330081_157330104	0.0419492	FOXJ2	ENST00000409674.1|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr20_+_55926583_55926623	0.0417136	FOXJ2	ENST00000395840.2|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr15_-_55881135_55881192	0.0412185	FOXJ2	ENST00000302000.6|PYGO1|ENSG00000171016.7|pygopus family PHD finger 1
hg19_v2_chr1_-_230513367_230513391	0.040555	FOXJ2	ENST00000321327.2|PGBD5|ENSG00000177614.5|piggyBac transposable element derived 5 	ENST00000525115.1|PGBD5|ENSG00000177614.5|piggyBac transposable element derived 5
hg19_v2_chr4_-_38806404_38806537	0.0402206	FOXJ2	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr2_+_90121477_90121477	0.03978	FOXJ2	ENST00000483379.1|IGKV1D-17|ENSG00000242766.1|immunoglobulin kappa variable 1D-17
hg19_v2_chr4_-_68749699_68749725	0.0375321	FOXJ2	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr15_+_66797455_66797483	0.0360703	FOXJ2	ENST00000446801.2|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr4_+_110749143_110749155	0.0354949	FOXJ2	ENST00000317735.4|RRH|ENSG00000180245.4|retinal pigment epithelium-derived rhodopsin homolog
hg19_v2_chr12_+_123949053_123949053	0.0306647	FOXJ2	ENST00000350887.5|SNRNP35|ENSG00000184209.14|small nuclear ribonucleoprotein 35kDa (U11/U12)
hg19_v2_chr14_+_37126765_37126799	0.0298602	FOXJ2	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr2_+_216176540_216176702	0.0274147	FOXJ2	ENST00000236959.9|ATIC|ENSG00000138363.10|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
hg19_v2_chr18_+_32455201_32455314	0.0250328	FOXJ2	ENST00000590831.2|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr4_-_47983519_47983583	0.0229236	FOXJ2	ENST00000358519.4|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000544810.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000402813.3|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chrX_+_11311533_11311533	0.0226857	FOXJ2	ENST00000380714.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000380712.3|AMELX|ENSG00000125363.10|amelogenin, X-linked 	ENST00000348912.4|AMELX|ENSG00000125363.10|amelogenin, X-linked
hg19_v2_chr16_-_90096309_90096309	0.0212723	FOXJ2	ENST00000408886.2|C16orf3|ENSG00000221819.2|chromosome 16 open reading frame 3
hg19_v2_chr8_+_58890917_58890964	0.0191618	FOXJ2	ENST00000522992.1|RP11-1112C15.1|ENSG00000205293.3|RP11-1112C15.1
hg19_v2_chr19_-_54619006_54619055	0.0181176	FOXJ2	ENST00000391759.1|TFPT|ENSG00000105619.9|TCF3 (E2A) fusion partner (in childhood Leukemia)
hg19_v2_chr12_-_102874378_102874394	0.0144491	FOXJ2	ENST00000456098.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr9_+_5510558_5510570	0.013957	FOXJ2	ENST00000397747.3|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
hg19_v2_chr15_+_42696992_42697017	0.012206	FOXJ2	ENST00000561817.1|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr1_-_220263096_220263192	0.0112376	FOXJ2	ENST00000463953.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000354807.3|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000414869.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498237.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498791.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000544404.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000480959.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000322067.7|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1
hg19_v2_chr6_+_10748019_10748072	0.0106006	FOXJ2	ENST00000543878.1|SYCP2L|ENSG00000153157.8|synaptonemal complex protein 2-like 	ENST00000461342.1|TMEM14B|ENSG00000137210.9|transmembrane protein 14B 	ENST00000475942.1|TMEM14B|ENSG00000137210.9|transmembrane protein 14B 	ENST00000379530.3|TMEM14B|ENSG00000137210.9|transmembrane protein 14B 	ENST00000473276.1|TMEM14B|ENSG00000137210.9|transmembrane protein 14B 	ENST00000481240.1|TMEM14B|ENSG00000137210.9|transmembrane protein 14B 	ENST00000467317.1|TMEM14B|ENSG00000137210.9|transmembrane protein 14B
hg19_v2_chr1_-_60392452_60392499	0.00913051	FOXJ2	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
hg19_v2_chr6_+_152130240_152130274	0.00756491	FOXJ2	ENST00000427531.2|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr17_+_27047244_27047317	0.00518632	FOXJ2	ENST00000394938.4|RPL23A|ENSG00000198242.9|ribosomal protein L23a 	ENST00000394935.3|RPL23A|ENSG00000198242.9|ribosomal protein L23a 	ENST00000355731.4|RPL23A|ENSG00000198242.9|ribosomal protein L23a
hg19_v2_chr6_+_10747986_10747997	0.00245903	FOXJ2	ENST00000379542.5|TMEM14B|ENSG00000137210.9|transmembrane protein 14B
hg19_v2_chr7_+_80275621_80275648	0.00140948	FOXJ2	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr9_+_133569108_133569193	0.000611444	FOXJ2	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
