hg19_v2_chr1_-_92351769_92351787	2.04654	GCAGCAU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr8_+_106330920_106330979	1.2056	GCAGCAU	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr3_+_43328004_43328095	1.05991	GCAGCAU	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr6_+_135502466_135502489	1.05565	GCAGCAU	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr15_-_41624685_41624819	1.00497	GCAGCAU	ENST00000560640.1|OIP5|ENSG00000104147.4|Opa interacting protein 5 	ENST00000220514.3|OIP5|ENSG00000104147.4|Opa interacting protein 5
hg19_v2_chr17_-_28618948_28619023	0.990074	GCAGCAU	ENST00000261714.6|BLMH|ENSG00000108578.10|bleomycin hydrolase
hg19_v2_chr8_+_81397876_81397902	0.894494	GCAGCAU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr11_-_86666427_86666450	0.879884	GCAGCAU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr22_+_21771656_21771693	0.842562	GCAGCAU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr13_+_58206655_58206655	0.840492	GCAGCAU	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr3_+_152017181_152017229	0.811248	GCAGCAU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr18_+_60190226_60190314	0.739967	GCAGCAU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr3_-_15374033_15374136	0.701602	GCAGCAU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr19_+_30302805_30302916	0.697566	GCAGCAU	ENST00000262643.3|CCNE1|ENSG00000105173.9|cyclin E1 	ENST00000575243.1|CCNE1|ENSG00000105173.9|cyclin E1 	ENST00000357943.5|CCNE1|ENSG00000105173.9|cyclin E1
hg19_v2_chr20_+_35201857_35201891	0.689353	GCAGCAU	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr5_-_98262240_98262240	0.677829	GCAGCAU	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr20_+_8112824_8112925	0.673916	GCAGCAU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr13_-_76056250_76056280	0.667756	GCAGCAU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr7_-_11871815_11871831	0.656847	GCAGCAU	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chrX_-_20284958_20285039	0.637586	GCAGCAU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr8_-_57123815_57123867	0.624921	GCAGCAU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr14_+_103243813_103243955	0.617191	GCAGCAU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr9_-_36400213_36400296	0.596119	GCAGCAU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr6_-_90062543_90062567	0.593489	GCAGCAU	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr5_+_102455853_102455961	0.582687	GCAGCAU	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr2_-_200322723_200322819	0.566522	GCAGCAU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr17_-_56595196_56595266	0.543772	GCAGCAU	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr15_-_61521495_61521518	0.538628	GCAGCAU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr12_-_31479045_31479074	0.532423	GCAGCAU	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr10_-_11653753_11653806	0.526716	GCAGCAU	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr17_+_53342311_53342400	0.508512	GCAGCAU	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr5_-_126366500_126366547	0.498344	GCAGCAU	ENST00000308660.5|MARCH3|ENSG00000173926.5|membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
hg19_v2_chr17_+_30264014_30264086	0.489687	GCAGCAU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr7_-_139876812_139876860	0.486723	GCAGCAU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr8_-_93115445_93115462	0.476473	GCAGCAU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr3_-_53381539_53381654	0.458065	GCAGCAU	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr11_+_14665263_14665274	0.444995	GCAGCAU	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr3_+_38495333_38495422	0.416873	GCAGCAU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr14_+_29234870_29235050	0.408051	GCAGCAU	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr1_+_36348790_36348822	0.401202	GCAGCAU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr2_+_120517174_120517207	0.397656	GCAGCAU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr8_+_38614807_38614851	0.383979	GCAGCAU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr2_-_24149977_24150007	0.377935	GCAGCAU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr17_-_65241281_65241326	0.374487	GCAGCAU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr12_+_57943781_57943869	0.359296	GCAGCAU	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr9_-_127905736_127905815	0.355803	GCAGCAU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr14_+_33408449_33408525	0.348052	GCAGCAU	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr1_+_10271674_10271674	0.347644	GCAGCAU	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr1_-_156786530_156786626	0.345529	GCAGCAU	ENST00000368198.3|SH2D2A|ENSG00000027869.7|SH2 domain containing 2A
hg19_v2_chr22_+_40573921_40573946	0.342583	GCAGCAU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr10_-_94003003_94003013	0.342478	GCAGCAU	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr15_+_75287861_75287961	0.3424	GCAGCAU	ENST00000425597.3|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562327.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000568018.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562212.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000567920.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000566872.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000361900.6|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000545456.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5
hg19_v2_chr10_+_88718397_88718424	0.336063	GCAGCAU	ENST00000372017.3|SNCG|ENSG00000173267.9|synuclein, gamma (breast cancer-specific protein 1)
hg19_v2_chr2_+_45878790_45878913	0.319684	GCAGCAU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr5_+_65440032_65440099	0.315989	GCAGCAU	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr1_+_26798955_26799010	0.313908	GCAGCAU	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr7_-_55640176_55640228	0.312635	GCAGCAU	ENST00000285279.5|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chrX_+_118108571_118108589	0.310648	GCAGCAU	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr7_+_32535060_32535322	0.30919	GCAGCAU	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr1_-_154842741_154842772	0.299905	GCAGCAU	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr22_+_41697520_41697613	0.294519	GCAGCAU	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr15_-_28567298_28567298	0.291452	GCAGCAU	ENST00000261609.7|HERC2|ENSG00000128731.11|HECT and RLD domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr8_+_23430157_23430157	0.289682	GCAGCAU	ENST00000399967.3|FP15737|ENSG00000215298.3|FP15737
hg19_v2_chr12_-_9913489_9913506	0.289148	GCAGCAU	ENST00000228434.3|CD69|ENSG00000110848.4|CD69 molecule 	ENST00000536709.1|CD69|ENSG00000110848.4|CD69 molecule
hg19_v2_chr15_+_41952591_41952672	0.287839	GCAGCAU	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr3_+_14989076_14989113	0.287217	GCAGCAU	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr2_-_172017343_172017391	0.285454	GCAGCAU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr17_-_45266542_45266683	0.285134	GCAGCAU	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr16_-_88851618_88851635	0.276645	GCAGCAU	ENST00000301015.9|PIEZO1|ENSG00000103335.15|piezo-type mechanosensitive ion channel component 1
hg19_v2_chr2_-_166930131_166930149	0.269408	GCAGCAU	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr16_-_74700737_74700804	0.266921	GCAGCAU	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr12_-_8088871_8088932	0.259667	GCAGCAU	ENST00000075120.7|SLC2A3|ENSG00000059804.11|solute carrier family 2 (facilitated glucose transporter), member 3
hg19_v2_chr6_+_34204642_34204664	0.259618	GCAGCAU	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr3_-_196159268_196159345	0.258608	GCAGCAU	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chr15_-_49447835_49447858	0.254907	GCAGCAU	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr1_-_78444776_78444800	0.253876	GCAGCAU	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr4_+_126237554_126237554	0.250515	GCAGCAU	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr14_+_70078303_70078321	0.249294	GCAGCAU	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr3_-_171178157_171178225	0.236595	GCAGCAU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr19_-_46476791_46476819	0.23558	GCAGCAU	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr4_-_25864581_25864621	0.235079	GCAGCAU	ENST00000399878.3|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
hg19_v2_chr11_+_59522532_59522595	0.232842	GCAGCAU	ENST00000337979.4|STX3|ENSG00000166900.10|syntaxin 3 	ENST00000535361.1|STX3|ENSG00000166900.10|syntaxin 3
hg19_v2_chr17_-_35969409_35969544	0.231164	GCAGCAU	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr12_+_53399942_53400071	0.228972	GCAGCAU	ENST00000262056.9|EIF4B|ENSG00000063046.13|eukaryotic translation initiation factor 4B
hg19_v2_chr16_+_69599861_69599887	0.227713	GCAGCAU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr12_-_8025442_8025459	0.224617	GCAGCAU	ENST00000340749.5|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000535295.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000539234.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v2_chr17_-_27224621_27224759	0.21831	GCAGCAU	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr12_+_104359576_104359601	0.217015	GCAGCAU	ENST00000392872.3|TDG|ENSG00000139372.10|thymine-DNA glycosylase 	ENST00000436021.2|TDG|ENSG00000139372.10|thymine-DNA glycosylase
hg19_v2_chr10_+_72164135_72164135	0.214778	GCAGCAU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr12_+_51985001_51985037	0.213723	GCAGCAU	ENST00000354534.6|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr6_+_134274322_134274342	0.210934	GCAGCAU	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr1_+_11072696_11072735	0.209173	GCAGCAU	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr22_-_39096661_39096681	0.208766	GCAGCAU	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr1_+_12040238_12040429	0.207543	GCAGCAU	ENST00000444836.1|MFN2|ENSG00000116688.12|mitofusin 2 	ENST00000235329.5|MFN2|ENSG00000116688.12|mitofusin 2
hg19_v2_chrX_-_131352152_131352204	0.207273	GCAGCAU	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr15_+_91411810_91411828	0.206695	GCAGCAU	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr3_-_72496035_72496069	0.204875	GCAGCAU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr6_-_43596899_43596915	0.204215	GCAGCAU	ENST00000307126.5|GTPBP2|ENSG00000172432.14|GTP binding protein 2 	ENST00000452781.1|GTPBP2|ENSG00000172432.14|GTP binding protein 2
hg19_v2_chr12_+_122242597_122242638	0.203079	GCAGCAU	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr1_-_205601064_205601090	0.199338	GCAGCAU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr17_-_74236382_74236454	0.199281	GCAGCAU	ENST00000592271.1|RNF157|ENSG00000141576.10|ring finger protein 157 	ENST00000319945.6|RNF157|ENSG00000141576.10|ring finger protein 157 	ENST00000269391.6|RNF157|ENSG00000141576.10|ring finger protein 157
hg19_v2_chr5_-_111093406_111093458	0.199122	GCAGCAU	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr20_+_30865429_30865480	0.197884	GCAGCAU	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr17_+_67410832_67410871	0.19604	GCAGCAU	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr8_+_23386305_23386318	0.195531	GCAGCAU	ENST00000519973.1|SLC25A37|ENSG00000147454.9|solute carrier family 25 (mitochondrial iron transporter), member 37
hg19_v2_chr2_-_68479614_68479685	0.190748	GCAGCAU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chrX_-_107975917_107975917	0.189656	GCAGCAU	ENST00000563887.1|RP6-24A23.6|ENSG00000260548.1|Uncharacterized protein
hg19_v2_chr15_+_69706585_69706641	0.187649	GCAGCAU	ENST00000559279.1|KIF23|ENSG00000137807.9|kinesin family member 23 	ENST00000395392.2|KIF23|ENSG00000137807.9|kinesin family member 23
hg19_v2_chr8_-_82024290_82024310	0.186689	GCAGCAU	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr2_-_201936302_201936416	0.185715	GCAGCAU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr6_-_11232891_11232915	0.184137	GCAGCAU	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr10_-_15210666_15210707	0.182553	GCAGCAU	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr2_-_40679186_40679297	0.181671	GCAGCAU	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr1_-_11120057_11120135	0.180721	GCAGCAU	ENST00000376957.2|SRM|ENSG00000116649.5|spermidine synthase
hg19_v2_chr22_-_41252962_41253026	0.18005	GCAGCAU	ENST00000216218.3|ST13|ENSG00000100380.8|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
hg19_v2_chr12_+_2162447_2162464	0.179223	GCAGCAU	ENST00000335762.5|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENST00000399655.1|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit
hg19_v2_chr4_+_47033345_47033377	0.177868	GCAGCAU	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr17_-_38804061_38804112	0.177313	GCAGCAU	ENST00000474246.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000377808.4|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000578044.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580419.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000400122.3|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000580654.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000577721.1|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000478349.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 	ENST00000431889.2|SMARCE1|ENSG00000073584.14|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
hg19_v2_chr17_+_29421900_29421951	0.175684	GCAGCAU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr1_+_113615794_113615884	0.17544	GCAGCAU	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr4_+_57774042_57774114	0.175075	GCAGCAU	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr4_-_90229142_90229217	0.175041	GCAGCAU	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr12_-_57400227_57400245	0.174763	GCAGCAU	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr16_+_87636474_87636533	0.17254	GCAGCAU	ENST00000284262.2|JPH3|ENSG00000154118.8|junctophilin 3
hg19_v2_chr8_-_66546439_66546451	0.171216	GCAGCAU	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr5_-_115910630_115910657	0.170319	GCAGCAU	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr12_+_104850740_104850768	0.170075	GCAGCAU	ENST00000547956.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000549260.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11 	ENST00000303694.5|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr10_+_89622870_89622870	0.169891	GCAGCAU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr8_+_21777159_21777221	0.169429	GCAGCAU	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr9_-_116163400_116163613	0.168156	GCAGCAU	ENST00000277315.5|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000448137.1|ALAD|ENSG00000148218.11|aminolevulinate dehydratase 	ENST00000409155.3|ALAD|ENSG00000148218.11|aminolevulinate dehydratase
hg19_v2_chr1_-_151300160_151300196	0.167853	GCAGCAU	ENST00000368874.4|PI4KB|ENSG00000143393.12|phosphatidylinositol 4-kinase, catalytic, beta
hg19_v2_chr16_+_56225248_56225307	0.165278	GCAGCAU	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr18_+_2655692_2655737	0.163187	GCAGCAU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr5_-_147162078_147162106	0.16303	GCAGCAU	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr20_-_13765526_13765578	0.162743	GCAGCAU	ENST00000202816.1|ESF1|ENSG00000089048.10|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
hg19_v2_chr19_-_47975417_47975441	0.161638	GCAGCAU	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr17_+_61699766_61699826	0.161054	GCAGCAU	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr5_+_75378997_75379080	0.160264	GCAGCAU	ENST00000502798.2|SV2C|ENSG00000122012.9|synaptic vesicle glycoprotein 2C
hg19_v2_chr1_-_70671216_70671303	0.15944	GCAGCAU	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr1_-_179198702_179198741	0.158028	GCAGCAU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chrX_-_118827333_118827365	0.154275	GCAGCAU	ENST00000360156.7|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354228.4|SEPT6|ENSG00000125354.18|septin 6 	ENST00000489216.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354416.3|SEPT6|ENSG00000125354.18|septin 6 	ENST00000394610.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000343984.5|SEPT6|ENSG00000125354.18|septin 6
hg19_v2_chr3_-_176914238_176914277	0.152908	GCAGCAU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr4_-_76598296_76598318	0.152045	GCAGCAU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr12_+_8185288_8185339	0.149345	GCAGCAU	ENST00000162391.3|FOXJ2|ENSG00000065970.4|forkhead box J2
hg19_v2_chr4_+_140222609_140222742	0.147887	GCAGCAU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr22_+_45559722_45559881	0.146839	GCAGCAU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr19_+_1941117_1941200	0.145637	GCAGCAU	ENST00000255641.8|CSNK1G2|ENSG00000133275.11|casein kinase 1, gamma 2
hg19_v2_chr10_-_62149433_62149488	0.144086	GCAGCAU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr14_-_53258314_53258418	0.143876	GCAGCAU	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
hg19_v2_chr5_-_100238956_100238994	0.14204	GCAGCAU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr3_-_88108192_88108203	0.14065	GCAGCAU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr12_+_104458235_104458344	0.140224	GCAGCAU	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr16_-_70472946_70473024	0.139854	GCAGCAU	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr9_-_91793675_91793698	0.138578	GCAGCAU	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chrX_+_14547632_14547682	0.138357	GCAGCAU	ENST00000218075.4|GLRA2|ENSG00000101958.9|glycine receptor, alpha 2
hg19_v2_chr5_-_132948216_132948255	0.136397	GCAGCAU	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr6_-_91006461_91006517	0.136186	GCAGCAU	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr3_-_24536253_24536328	0.13169	GCAGCAU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr12_-_81331697_81331733	0.130924	GCAGCAU	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr10_+_97803151_97803348	0.129638	GCAGCAU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr22_+_32340481_32340510	0.129301	GCAGCAU	ENST00000397492.1|YWHAH|ENSG00000128245.10|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
hg19_v2_chr6_+_69345166_69345259	0.12895	GCAGCAU	ENST00000370598.1|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr6_+_152011628_152011642	0.128625	GCAGCAU	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr4_+_106629929_106629982	0.125402	GCAGCAU	ENST00000512828.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000394730.3|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000507281.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000515279.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr21_+_35445827_35445886	0.125165	GCAGCAU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr12_-_102513843_102513908	0.122437	GCAGCAU	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr12_-_120884175_120884218	0.120046	GCAGCAU	ENST00000546954.1|TRIAP1|ENSG00000170855.3|TP53 regulated inhibitor of apoptosis 1
hg19_v2_chr1_-_150849208_150849244	0.118565	GCAGCAU	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr11_-_82782861_82782949	0.11766	GCAGCAU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr3_+_9439400_9439414	0.117224	GCAGCAU	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr17_-_26684473_26684571	0.116365	GCAGCAU	ENST00000540200.1|POLDIP2|ENSG00000004142.7|polymerase (DNA-directed), delta interacting protein 2
hg19_v2_chr7_-_105517021_105517050	0.116078	GCAGCAU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr11_+_113930291_113930339	0.113461	GCAGCAU	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr12_+_105501487_105501562	0.112591	GCAGCAU	ENST00000332180.5|KIAA1033|ENSG00000136051.9|KIAA1033
hg19_v2_chr14_-_57735528_57735726	0.111461	GCAGCAU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr3_+_196594727_196594816	0.109465	GCAGCAU	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr22_-_42017021_42017100	0.108201	GCAGCAU	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr16_+_69345243_69345312	0.107172	GCAGCAU	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chrX_+_70752917_70752933	0.107149	GCAGCAU	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chrX_-_19988382_19988416	0.10619	GCAGCAU	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr12_-_117799446_117799582	0.105257	GCAGCAU	ENST00000317775.6|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal) 	ENST00000344089.3|NOS1|ENSG00000089250.14|nitric oxide synthase 1 (neuronal)
hg19_v2_chr2_+_16080659_16080686	0.104792	GCAGCAU	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr16_-_25026641_25026698	0.101709	GCAGCAU	ENST00000289968.6|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000303665.5|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000455311.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000441763.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr1_+_36396677_36396749	0.101062	GCAGCAU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr2_-_160472952_160473080	0.0999396	GCAGCAU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr5_+_5422778_5422841	0.0957264	GCAGCAU	ENST00000296564.7|KIAA0947|ENSG00000164151.7|KIAA0947
hg19_v2_chr10_-_75634260_75634321	0.0952473	GCAGCAU	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr17_-_73975444_73975528	0.0943834	GCAGCAU	ENST00000293217.5|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl 	ENST00000537812.1|ACOX1|ENSG00000161533.7|acyl-CoA oxidase 1, palmitoyl
hg19_v2_chr1_+_26737253_26737269	0.0942106	GCAGCAU	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr7_-_26240357_26240377	0.0937983	GCAGCAU	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr12_-_65146636_65146651	0.093447	GCAGCAU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr1_+_110091189_110091268	0.0931627	GCAGCAU	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr9_-_127952032_127952098	0.0918134	GCAGCAU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr11_+_111473108_111473226	0.0911216	GCAGCAU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr12_-_22697343_22697500	0.0891696	GCAGCAU	ENST00000446597.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000536386.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000396028.2|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000545552.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000544930.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000333957.4|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5
hg19_v2_chr2_+_166095898_166095940	0.0885143	GCAGCAU	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr3_+_47324424_47324447	0.0884782	GCAGCAU	ENST00000437353.1|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000232766.5|KLHL18|ENSG00000114648.7|kelch-like family member 18 	ENST00000455924.2|KLHL18|ENSG00000114648.7|kelch-like family member 18
hg19_v2_chr17_+_29718642_29718656	0.0835414	GCAGCAU	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr16_+_81348528_81348578	0.0829014	GCAGCAU	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr1_-_22469459_22469541	0.0818417	GCAGCAU	ENST00000290167.6|WNT4|ENSG00000162552.10|wingless-type MMTV integration site family, member 4
hg19_v2_chr19_-_11591848_11591865	0.0814682	GCAGCAU	ENST00000359227.3|ELAVL3|ENSG00000196361.5|ELAV like neuron-specific RNA binding protein 3
hg19_v2_chr10_+_101419187_101419313	0.0813272	GCAGCAU	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chrX_-_122866874_122866911	0.0802631	GCAGCAU	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chrX_+_151806637_151806637	0.0802334	GCAGCAU	ENST00000370306.2|GABRQ|ENSG00000147402.7|gamma-aminobutyric acid (GABA) A receptor, theta
hg19_v2_chr2_-_165697920_165697963	0.0791911	GCAGCAU	ENST00000342193.4|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1 	ENST00000375458.2|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1
hg19_v2_chr1_+_93913713_93913839	0.0787396	GCAGCAU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr11_-_13517565_13517728	0.078461	GCAGCAU	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr19_-_49314269_49314293	0.0772495	GCAGCAU	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr17_-_73257667_73257716	0.0769088	GCAGCAU	ENST00000538886.1|GGA3|ENSG00000125447.12|golgi-associated, gamma adaptin ear containing, ARF binding protein 3 	ENST00000580799.1|GGA3|ENSG00000125447.12|golgi-associated, gamma adaptin ear containing, ARF binding protein 3 	ENST00000351904.7|GGA3|ENSG00000125447.12|golgi-associated, gamma adaptin ear containing, ARF binding protein 3 	ENST00000537686.1|GGA3|ENSG00000125447.12|golgi-associated, gamma adaptin ear containing, ARF binding protein 3
hg19_v2_chr4_+_6784401_6784510	0.0767185	GCAGCAU	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr2_-_131850951_131851065	0.0763561	GCAGCAU	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr3_-_164913777_164913790	0.0758229	GCAGCAU	ENST00000475390.1|SLITRK3|ENSG00000121871.3|SLIT and NTRK-like family, member 3
hg19_v2_chr9_+_115249100_115249358	0.0744383	GCAGCAU	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr5_+_172483347_172483407	0.0743401	GCAGCAU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr1_-_33502441_33502500	0.0735617	GCAGCAU	ENST00000548033.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000487289.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000373449.2|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000480134.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000467905.1|AK2|ENSG00000004455.12|adenylate kinase 2
hg19_v2_chr2_+_85198216_85198305	0.0734329	GCAGCAU	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr8_+_96145974_96146041	0.071722	GCAGCAU	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr19_-_43032532_43032661	0.0690236	GCAGCAU	ENST00000403461.1|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000352591.5|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000358394.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000403444.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000308072.4|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000599389.1|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000351134.3|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 	ENST00000161559.6|CEACAM1|ENSG00000079385.17|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)
hg19_v2_chr11_+_118230287_118230361	0.0681117	GCAGCAU	ENST00000252108.3|UBE4A|ENSG00000110344.5|ubiquitination factor E4A 	ENST00000431736.2|UBE4A|ENSG00000110344.5|ubiquitination factor E4A
hg19_v2_chr3_-_194090460_194090479	0.0667141	GCAGCAU	ENST00000428839.1|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15 	ENST00000347624.3|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15
hg19_v2_chr6_-_116381918_116381977	0.0666477	GCAGCAU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr14_+_102228123_102228237	0.0660644	GCAGCAU	ENST00000422945.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000554442.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556260.2|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000328724.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557268.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr7_+_116502527_116502558	0.0638795	GCAGCAU	ENST00000361183.3|CAPZA2|ENSG00000198898.8|capping protein (actin filament) muscle Z-line, alpha 2
hg19_v2_chr14_+_39644387_39644417	0.0629335	GCAGCAU	ENST00000553331.1|PNN|ENSG00000100941.4|pinin, desmosome associated protein 	ENST00000216832.4|PNN|ENSG00000100941.4|pinin, desmosome associated protein
hg19_v2_chr8_-_81083731_81083813	0.0628783	GCAGCAU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr4_+_124320665_124320702	0.0618651	GCAGCAU	ENST00000394339.2|SPRY1|ENSG00000164056.6|sprouty homolog 1, antagonist of FGF signaling (Drosophila)
hg19_v2_chr13_+_42622781_42622889	0.0608854	GCAGCAU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr6_-_24721054_24721074	0.0592648	GCAGCAU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr20_+_1099233_1099315	0.0585378	GCAGCAU	ENST00000246015.4|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000335877.6|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 	ENST00000438768.2|PSMF1|ENSG00000125818.13|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
hg19_v2_chrX_-_102757802_102757810	0.0575841	GCAGCAU	ENST00000372633.1|RAB40A|ENSG00000172476.3|RAB40A, member RAS oncogene family
hg19_v2_chr2_-_16847084_16847110	0.057289	GCAGCAU	ENST00000406434.1|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A 	ENST00000381323.3|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A
hg19_v2_chr12_+_22778009_22778112	0.0566992	GCAGCAU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr7_+_99613195_99613206	0.0566344	GCAGCAU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr8_-_41655107_41655159	0.055205	GCAGCAU	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr10_-_99052382_99052413	0.0549671	GCAGCAU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr7_+_95401851_95401876	0.0549067	GCAGCAU	ENST00000447467.2|DYNC1I1|ENSG00000158560.10|dynein, cytoplasmic 1, intermediate chain 1
hg19_v2_chr16_-_20364030_20364038	0.0541174	GCAGCAU	ENST00000396134.2|UMOD|ENSG00000169344.11|uromodulin 	ENST00000573567.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000570757.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000424589.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000302509.4|UMOD|ENSG00000169344.11|uromodulin 	ENST00000571174.1|UMOD|ENSG00000169344.11|uromodulin 	ENST00000576688.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr19_+_10982189_10982272	0.0497632	GCAGCAU	ENST00000327064.4|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1 	ENST00000588947.1|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1
hg19_v2_chr2_+_170440844_170440897	0.0464789	GCAGCAU	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr4_-_39979576_39979588	0.0452191	GCAGCAU	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr13_+_20532807_20532841	0.0433814	GCAGCAU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr1_+_203274639_203274664	0.0423244	GCAGCAU	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr14_-_27066636_27066701	0.0409486	GCAGCAU	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chrX_+_30671476_30671655	0.0406407	GCAGCAU	ENST00000378946.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378943.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378945.3|GK|ENSG00000198814.8|glycerol kinase 	ENST00000427190.1|GK|ENSG00000198814.8|glycerol kinase 	ENST00000378941.3|GK|ENSG00000198814.8|glycerol kinase
hg19_v2_chr17_+_40834580_40834633	0.0406258	GCAGCAU	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr7_-_92463210_92463231	0.040279	GCAGCAU	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr17_-_1465924_1466129	0.0375339	GCAGCAU	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr16_-_20911641_20911720	0.0371051	GCAGCAU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr9_+_37800758_37800822	0.0361069	GCAGCAU	ENST00000242323.7|DCAF10|ENSG00000122741.11|DDB1 and CUL4 associated factor 10
hg19_v2_chr3_+_119187785_119187863	0.034966	GCAGCAU	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr17_-_42580738_42580798	0.0336031	GCAGCAU	ENST00000585614.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000591680.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000434000.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000588554.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000592154.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8
hg19_v2_chr1_+_33005020_33005077	0.0325543	GCAGCAU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr6_+_30539153_30539255	0.0313985	GCAGCAU	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr12_+_20522179_20522203	0.0303026	GCAGCAU	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr2_+_204192942_204193038	0.0291184	GCAGCAU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr3_+_9975497_9975553	0.0284833	GCAGCAU	ENST00000397170.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000383811.3|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000452070.1|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1 	ENST00000326434.5|CRELD1|ENSG00000163703.13|cysteine-rich with EGF-like domains 1
hg19_v2_chr7_-_994302_994333	0.0275063	GCAGCAU	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr3_-_49907323_49907374	0.0257946	GCAGCAU	ENST00000296471.7|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000488336.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000467248.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000466940.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000463537.1|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated 	ENST00000480398.2|CAMKV|ENSG00000164076.12|CaM kinase-like vesicle-associated
hg19_v2_chr7_-_44924939_44924993	0.0253506	GCAGCAU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr1_-_171711387_171711420	0.0243441	GCAGCAU	ENST00000236192.7|VAMP4|ENSG00000117533.10|vesicle-associated membrane protein 4
hg19_v2_chr12_+_50451331_50451429	0.0226508	GCAGCAU	ENST00000228468.4|ASIC1|ENSG00000110881.7|acid-sensing (proton-gated) ion channel 1
hg19_v2_chr1_+_100435315_100435345	0.0224045	GCAGCAU	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr22_-_32146106_32146141	0.0206769	GCAGCAU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chr12_-_49351148_49351222	0.0201217	GCAGCAU	ENST00000398092.4|RP11-302B13.5|ENSG00000272822.1|ADP-ribosylation factor 3  	ENST00000539611.1|ARF3|ENSG00000134287.5|ADP-ribosylation factor 3
hg19_v2_chr3_-_58419537_58419584	0.0200422	GCAGCAU	ENST00000474765.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000485460.1|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000302746.6|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta 	ENST00000383714.4|PDHB|ENSG00000168291.8|pyruvate dehydrogenase (lipoamide) beta
hg19_v2_chr1_+_110754094_110754122	0.0183426	GCAGCAU	ENST00000369787.3|KCNC4|ENSG00000116396.9|potassium voltage-gated channel, Shaw-related subfamily, member 4 	ENST00000413138.3|KCNC4|ENSG00000116396.9|potassium voltage-gated channel, Shaw-related subfamily, member 4 	ENST00000438661.2|KCNC4|ENSG00000116396.9|potassium voltage-gated channel, Shaw-related subfamily, member 4
hg19_v2_chr2_+_149632783_149632820	0.0180068	GCAGCAU	ENST00000435030.1|KIF5C|ENSG00000168280.12|kinesin family member 5C
hg19_v2_chr20_+_33814457_33814506	0.0171548	GCAGCAU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr6_+_155054459_155054561	0.0169902	GCAGCAU	ENST00000367178.3|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000417268.1|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8 	ENST00000367186.4|SCAF8|ENSG00000213079.5|SR-related CTD-associated factor 8
hg19_v2_chr10_-_100995540_100995559	0.0168602	GCAGCAU	ENST00000370546.1|HPSE2|ENSG00000172987.8|heparanase 2 	ENST00000404542.1|HPSE2|ENSG00000172987.8|heparanase 2
hg19_v2_chrX_+_102192200_102192200	0.016799	GCAGCAU	ENST00000218249.5|RAB40AL|ENSG00000102128.6|RAB40A, member RAS oncogene family-like
hg19_v2_chr7_-_95225768_95225967	0.0166839	GCAGCAU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chrX_+_95939711_95939786	0.0160589	GCAGCAU	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr1_+_78245303_78245351	0.0136806	GCAGCAU	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr12_+_862089_862343	0.00927004	GCAGCAU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr1_-_155224751_155224779	0.00902014	GCAGCAU	ENST00000350210.2|FAM189B|ENSG00000160767.16|family with sequence similarity 189, member B 	ENST00000368368.3|FAM189B|ENSG00000160767.16|family with sequence similarity 189, member B
hg19_v2_chr3_-_12200851_12200885	0.00900715	GCAGCAU	ENST00000287814.4|TIMP4|ENSG00000157150.4|TIMP metallopeptidase inhibitor 4
hg19_v2_chr6_+_138188551_138188719	0.00875971	GCAGCAU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr9_-_111696340_111696421	0.00849269	GCAGCAU	ENST00000374647.5|IKBKAP|ENSG00000070061.10|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
hg19_v2_chr22_+_39745930_39746012	0.00703122	GCAGCAU	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr17_-_4167142_4167281	0.00680057	GCAGCAU	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr1_+_14925173_14925213	0.00477483	GCAGCAU	ENST00000376030.2|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein 	ENST00000503743.1|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein 	ENST00000422387.2|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein
hg19_v2_chr1_-_24306798_24306828	0.00428878	GCAGCAU	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr5_+_179159813_179159851	0.00361994	GCAGCAU	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr8_+_37654424_37654436	0.00348229	GCAGCAU	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr2_+_176981307_176981307	0.0022826	GCAGCAU	ENST00000249501.4|HOXD10|ENSG00000128710.5|homeobox D10
hg19_v2_chr3_-_160283348_160283376	0.00221297	GCAGCAU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr8_-_71316021_71316068	0.00151713	GCAGCAU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr18_+_905104_905118	0.00121614	GCAGCAU	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr5_-_146833485_146833522	0.000358122	GCAGCAU	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
