hg19_v2_chr2_-_161350305_161350391	2.16074	GGAAGAC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr12_-_106641728_106641805	1.77478	GGAAGAC	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr2_-_227664474_227664508	1.62	GGAAGAC	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr11_-_115375107_115375283	1.36369	GGAAGAC	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr8_+_26435359_26435426	1.36063	GGAAGAC	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr3_-_149688896_149688970	1.30396	GGAAGAC	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr16_-_4166186_4166186	1.26426	GGAAGAC	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr6_+_53659746_53659817	1.06611	GGAAGAC	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr1_-_95392635_95392834	0.932491	GGAAGAC	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr16_-_4987065_4987156	0.89286	GGAAGAC	ENST00000590782.2|PPL|ENSG00000118898.11|periplakin 	ENST00000345988.2|PPL|ENSG00000118898.11|periplakin
hg19_v2_chr3_+_30648066_30648167	0.831094	GGAAGAC	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr11_-_70507901_70507958	0.734215	GGAAGAC	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr5_-_111093406_111093458	0.704747	GGAAGAC	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr12_-_46766577_46766650	0.676756	GGAAGAC	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr2_-_73340146_73340185	0.627695	GGAAGAC	ENST00000258098.6|RAB11FIP5|ENSG00000135631.11|RAB11 family interacting protein 5 (class I)
hg19_v2_chr14_-_70883708_70883819	0.542577	GGAAGAC	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr14_+_85996471_85996497	0.50218	GGAAGAC	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr17_-_34308524_34308548	0.492336	GGAAGAC	ENST00000293275.3|CCL16|ENSG00000161573.6|chemokine (C-C motif) ligand 16
hg19_v2_chr12_-_48398104_48398269	0.481473	GGAAGAC	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr10_-_99447024_99447080	0.45029	GGAAGAC	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr20_-_48532019_48532045	0.424967	GGAAGAC	ENST00000289431.5|SPATA2|ENSG00000158480.6|spermatogenesis associated 2
hg19_v2_chr11_-_73309228_73309257	0.401198	GGAAGAC	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr3_-_121468602_121468617	0.383476	GGAAGAC	ENST00000340645.5|GOLGB1|ENSG00000173230.11|golgin B1
hg19_v2_chr3_-_133969437_133969670	0.382801	GGAAGAC	ENST00000460933.1|RYK|ENSG00000163785.8|receptor-like tyrosine kinase 	ENST00000296084.4|RYK|ENSG00000163785.8|receptor-like tyrosine kinase
hg19_v2_chr2_-_27718052_27718127	0.35769	GGAAGAC	ENST00000264703.3|FNDC4|ENSG00000115226.5|fibronectin type III domain containing 4
hg19_v2_chr10_+_92980517_92980550	0.344602	GGAAGAC	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr9_-_110251836_110251927	0.319728	GGAAGAC	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr14_-_90085458_90085557	0.317725	GGAAGAC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr17_+_38375574_38375615	0.316763	GGAAGAC	ENST00000323571.4|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000585043.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000394103.3|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2 	ENST00000536600.1|WIPF2|ENSG00000171475.9|WAS/WASL interacting protein family, member 2
hg19_v2_chr3_-_48130707_48130789	0.314618	GGAAGAC	ENST00000360240.6|MAP4|ENSG00000047849.17|microtubule-associated protein 4 	ENST00000383737.4|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr16_+_15068955_15068991	0.300654	GGAAGAC	ENST00000396410.4|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000569715.1|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000450288.2|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1
hg19_v2_chr1_+_229440129_229440129	0.29666	GGAAGAC	ENST00000366688.3|SPHAR|ENSG00000213029.2|S-phase response (cyclin related)
hg19_v2_chr2_+_220042933_220042985	0.291189	GGAAGAC	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr3_-_57583130_57583152	0.27342	GGAAGAC	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr11_-_18656028_18656040	0.269172	GGAAGAC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr13_-_110438914_110438937	0.266208	GGAAGAC	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr20_+_8112824_8112925	0.251107	GGAAGAC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr7_-_35734730_35734777	0.249964	GGAAGAC	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr14_+_23340822_23341004	0.244032	GGAAGAC	ENST00000359591.4|LRP10|ENSG00000197324.4|low density lipoprotein receptor-related protein 10
hg19_v2_chr13_+_27131887_27131899	0.236045	GGAAGAC	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr16_-_74640986_74641022	0.23043	GGAAGAC	ENST00000422840.2|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000565260.1|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000447066.2|GLG1|ENSG00000090863.7|golgi glycoprotein 1 	ENST00000205061.5|GLG1|ENSG00000090863.7|golgi glycoprotein 1
hg19_v2_chr2_-_242212227_242212301	0.217186	GGAAGAC	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr1_+_28696111_28696130	0.205902	GGAAGAC	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr6_-_134639180_134639220	0.196967	GGAAGAC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr2_-_131850951_131851065	0.194149	GGAAGAC	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr5_+_176513868_176513893	0.189695	GGAAGAC	ENST00000292408.4|FGFR4|ENSG00000160867.10|fibroblast growth factor receptor 4
hg19_v2_chr2_+_118846008_118846100	0.182646	GGAAGAC	ENST00000245787.4|INSIG2|ENSG00000125629.10|insulin induced gene 2
hg19_v2_chr19_+_19431490_19431795	0.172831	GGAAGAC	ENST00000392313.6|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000262815.8|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000609122.1|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor
hg19_v2_chr12_+_60083118_60083157	0.164426	GGAAGAC	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr5_+_177019159_177019213	0.162344	GGAAGAC	ENST00000332598.6|TMED9|ENSG00000184840.7|transmembrane emp24 protein transport domain containing 9
hg19_v2_chr17_-_42908155_42908204	0.160965	GGAAGAC	ENST00000426548.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000590758.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000591424.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa
hg19_v2_chr3_+_126707437_126707437	0.160882	GGAAGAC	ENST00000393409.2|PLXNA1|ENSG00000114554.7|plexin A1 	ENST00000251772.4|PLXNA1|ENSG00000114554.7|plexin A1
hg19_v2_chr10_-_52645416_52645444	0.158364	GGAAGAC	ENST00000374001.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373997.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373995.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000282641.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000395495.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000414883.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor
hg19_v2_chr17_+_36508111_36508128	0.156873	GGAAGAC	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr19_+_41222998_41223057	0.154324	GGAAGAC	ENST00000263370.2|ITPKC|ENSG00000086544.2|inositol-trisphosphate 3-kinase C
hg19_v2_chr16_+_28962128_28962335	0.145355	GGAAGAC	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr19_-_36523709_36523796	0.14453	GGAAGAC	ENST00000592017.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3 	ENST00000360535.4|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chr21_+_38378863_38379025	0.134691	GGAAGAC	ENST00000329553.2|RIPPLY3|ENSG00000183145.4|ripply transcriptional repressor 3
hg19_v2_chr17_-_4167142_4167281	0.134422	GGAAGAC	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr11_+_9406169_9406210	0.131387	GGAAGAC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr8_-_145013711_145013786	0.129707	GGAAGAC	ENST00000345136.3|PLEC|ENSG00000178209.10|plectin
hg19_v2_chr7_+_55086794_55086811	0.128725	GGAAGAC	ENST00000275493.2|EGFR|ENSG00000146648.11|epidermal growth factor receptor 	ENST00000442591.1|EGFR|ENSG00000146648.11|epidermal growth factor receptor
hg19_v2_chr2_-_166651191_166651213	0.118166	GGAAGAC	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr17_+_68165657_68165688	0.114358	GGAAGAC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr20_+_30946106_30946168	0.10883	GGAAGAC	ENST00000375687.4|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila) 	ENST00000542461.1|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila)
hg19_v2_chr20_+_3451650_3451729	0.108683	GGAAGAC	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chrX_-_107975917_107975917	0.108498	GGAAGAC	ENST00000563887.1|RP6-24A23.6|ENSG00000260548.1|Uncharacterized protein
hg19_v2_chr7_-_139876812_139876860	0.108018	GGAAGAC	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr12_+_122150646_122150719	0.104885	GGAAGAC	ENST00000449592.2|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr7_-_32931387_32931509	0.1045	GGAAGAC	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr19_+_10527449_10527619	0.0984353	GGAAGAC	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr9_-_123476719_123476810	0.0982564	GGAAGAC	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr4_+_72204755_72204778	0.094873	GGAAGAC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr7_+_128379346_128379447	0.0947968	GGAAGAC	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr15_-_65809581_65809617	0.0933857	GGAAGAC	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr17_-_16118835_16118867	0.0896065	GGAAGAC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr1_-_109584608_109584712	0.0862988	GGAAGAC	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr7_-_44924939_44924993	0.0841845	GGAAGAC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr14_-_31495569_31495636	0.0833993	GGAAGAC	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr8_+_87354945_87355012	0.0815381	GGAAGAC	ENST00000517970.1|WWP1|ENSG00000123124.9|WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr18_+_19749386_19749404	0.0806402	GGAAGAC	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr20_+_32951041_32951067	0.0805621	GGAAGAC	ENST00000374864.4|ITCH|ENSG00000078747.8|itchy E3 ubiquitin protein ligase
hg19_v2_chr19_-_344786_344826	0.0775351	GGAAGAC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr16_+_69599861_69599887	0.0708173	GGAAGAC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr3_-_69435224_69435280	0.0692609	GGAAGAC	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr16_-_18812746_18813000	0.0686034	GGAAGAC	ENST00000546206.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000567078.2|RP11-1035H13.3|ENSG00000260342.2|Uncharacterized protein  	ENST00000562819.1|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000562234.2|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1 	ENST00000304414.7|ARL6IP1|ENSG00000170540.10|ADP-ribosylation factor-like 6 interacting protein 1
hg19_v2_chr10_+_80828774_80828792	0.0683331	GGAAGAC	ENST00000334512.5|ZMIZ1|ENSG00000108175.12|zinc finger, MIZ-type containing 1
hg19_v2_chr16_-_18937726_18937776	0.0666707	GGAAGAC	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr10_-_112064665_112064737	0.0653957	GGAAGAC	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr7_-_42276612_42276782	0.0629168	GGAAGAC	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr20_+_61427797_61427863	0.0603301	GGAAGAC	ENST00000370487.3|MRGBP|ENSG00000101189.5|MRG/MORF4L binding protein
hg19_v2_chr2_+_204192942_204193038	0.0554008	GGAAGAC	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr14_-_45431091_45431175	0.0551933	GGAAGAC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr7_+_77325738_77325789	0.0508389	GGAAGAC	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr12_-_56727487_56727533	0.0504306	GGAAGAC	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr9_-_123555655_123555712	0.050157	GGAAGAC	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr10_-_70287231_70287290	0.0498487	GGAAGAC	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr16_+_16043406_16043434	0.0463987	GGAAGAC	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chrX_+_70586082_70586114	0.0439627	GGAAGAC	ENST00000373790.4|TAF1|ENSG00000147133.11|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 	ENST00000449580.1|TAF1|ENSG00000147133.11|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 	ENST00000423759.1|TAF1|ENSG00000147133.11|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
hg19_v2_chr7_-_71801980_71802013	0.043684	GGAAGAC	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr6_+_37137939_37138004	0.0399698	GGAAGAC	ENST00000373509.5|PIM1|ENSG00000137193.9|pim-1 oncogene
hg19_v2_chr1_+_229406847_229406935	0.039689	GGAAGAC	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr17_+_29718642_29718656	0.0388839	GGAAGAC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr5_+_71403061_71403169	0.0385507	GGAAGAC	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr5_-_59189545_59189625	0.0378904	GGAAGAC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr3_-_114790179_114790222	0.0374383	GGAAGAC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr20_-_16554078_16554113	0.0372511	GGAAGAC	ENST00000354981.2|KIF16B|ENSG00000089177.13|kinesin family member 16B 	ENST00000355755.3|KIF16B|ENSG00000089177.13|kinesin family member 16B 	ENST00000378003.2|KIF16B|ENSG00000089177.13|kinesin family member 16B 	ENST00000408042.1|KIF16B|ENSG00000089177.13|kinesin family member 16B
hg19_v2_chr20_+_35234137_35234222	0.0362149	GGAAGAC	ENST00000344795.3|C20orf24|ENSG00000101084.12|chromosome 20 open reading frame 24 	ENST00000373852.5|C20orf24|ENSG00000101084.12|chromosome 20 open reading frame 24
hg19_v2_chr1_-_40157345_40157375	0.0357295	GGAAGAC	ENST00000372844.3|HPCAL4|ENSG00000116983.8|hippocalcin like 4
hg19_v2_chr1_+_43855560_43855640	0.0322003	GGAAGAC	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr3_-_178790057_178790072	0.0306797	GGAAGAC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr17_-_48474828_48474914	0.029053	GGAAGAC	ENST00000576448.1|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59 	ENST00000225972.7|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59
hg19_v2_chr7_+_106809406_106809460	0.027803	GGAAGAC	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr12_+_58166431_58166461	0.0276655	GGAAGAC	ENST00000333012.5|METTL21B|ENSG00000123427.11|methyltransferase like 21B
hg19_v2_chr10_+_82168240_82168322	0.0265237	GGAAGAC	ENST00000372187.5|FAM213A|ENSG00000122378.9|family with sequence similarity 213, member A 	ENST00000372185.1|FAM213A|ENSG00000122378.9|family with sequence similarity 213, member A
hg19_v2_chr1_-_205719295_205719404	0.0248575	GGAAGAC	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr5_+_15500280_15500312	0.0233514	GGAAGAC	ENST00000504595.1|FBXL7|ENSG00000183580.8|F-box and leucine-rich repeat protein 7
hg19_v2_chr7_+_94023873_94023873	0.0227618	GGAAGAC	ENST00000297268.6|COL1A2|ENSG00000164692.13|collagen, type I, alpha 2
hg19_v2_chr21_+_48055527_48055608	0.0225403	GGAAGAC	ENST00000397638.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000458387.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000451211.2|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000291705.6|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397637.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000334494.4|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000397628.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2 	ENST00000440086.1|PRMT2|ENSG00000160310.12|protein arginine methyltransferase 2
hg19_v2_chr1_+_24742264_24742312	0.022241	GGAAGAC	ENST00000374399.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000003912.3|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000358028.4|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3 	ENST00000339255.2|NIPAL3|ENSG00000001461.12|NIPA-like domain containing 3
hg19_v2_chr1_+_87170247_87170276	0.0219989	GGAAGAC	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chr9_+_128509624_128509658	0.0219424	GGAAGAC	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr2_+_73441350_73441399	0.02176	GGAAGAC	ENST00000389501.4|SMYD5|ENSG00000135632.7|SMYD family member 5
hg19_v2_chr1_+_206557366_206557368	0.0204284	GGAAGAC	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr12_+_122064398_122064484	0.0199139	GGAAGAC	ENST00000330079.7|ORAI1|ENSG00000182500.7|ORAI calcium release-activated calcium modulator 1
hg19_v2_chr9_-_14314066_14314075	0.017439	GGAAGAC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr1_+_113010056_113010056	0.015528	GGAAGAC	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr14_+_23790655_23790680	0.0145825	GGAAGAC	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr5_+_149887672_149887698	0.0139184	GGAAGAC	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr14_-_92506371_92506418	0.0133916	GGAAGAC	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr1_-_47069955_47069969	0.0133823	GGAAGAC	ENST00000341183.5|MKNK1|ENSG00000079277.15|MAP kinase interacting serine/threonine kinase 1 	ENST00000496619.1|MKNK1|ENSG00000079277.15|MAP kinase interacting serine/threonine kinase 1
hg19_v2_chr17_-_19771216_19771230	0.0115531	GGAAGAC	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr5_+_145826867_145826903	0.0108819	GGAAGAC	ENST00000296702.5|TCERG1|ENSG00000113649.7|transcription elongation regulator 1 	ENST00000394421.2|TCERG1|ENSG00000113649.7|transcription elongation regulator 1
hg19_v2_chr17_-_49198216_49198236	0.0104852	GGAAGAC	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr10_-_115904361_115904375	0.00953662	GGAAGAC	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr4_-_90758227_90758379	0.0093034	GGAAGAC	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr17_-_56406117_56406165	0.00876407	GGAAGAC	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr17_-_2206801_2206845	0.00832022	GGAAGAC	ENST00000544865.1|SMG6|ENSG00000070366.9|SMG6 nonsense mediated mRNA decay factor
hg19_v2_chr4_-_87281224_87281375	0.00727857	GGAAGAC	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr20_-_48099182_48099214	0.00703125	GGAAGAC	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr4_-_103748880_103749047	0.00676842	GGAAGAC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr3_-_12705600_12705725	0.00577868	GGAAGAC	ENST00000542177.1|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000442415.2|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000251849.4|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1
hg19_v2_chr17_-_39890893_39890898	0.00556894	GGAAGAC	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr2_+_135676381_135676435	0.00439538	GGAAGAC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr3_+_37493610_37493651	0.00428768	GGAAGAC	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr14_+_75469606_75469690	0.00301228	GGAAGAC	ENST00000266126.5|EIF2B2|ENSG00000119718.6|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
hg19_v2_chr20_-_30310336_30310400	0.00293114	GGAAGAC	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr16_-_12009735_12009793	0.00260532	GGAAGAC	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr16_+_69345243_69345312	0.00259066	GGAAGAC	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr2_+_234263120_234263174	0.00143845	GGAAGAC	ENST00000264057.2|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa 	ENST00000427930.1|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa
hg19_v2_chr3_-_88108192_88108203	0.00116696	GGAAGAC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
