hg19_v2_chr20_+_37434329_37434371	0.957563	GGCAGUG	ENST00000299824.1|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B 	ENST00000373331.2|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B
hg19_v2_chr16_-_89007491_89007608	0.897736	GGCAGUG	ENST00000327483.5|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000564416.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr6_-_90121938_90122025	0.890839	GGCAGUG	ENST00000369415.4|RRAGD|ENSG00000025039.10|Ras-related GTP binding D
hg19_v2_chr3_+_113251143_113251263	0.807133	GGCAGUG	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr8_-_81083731_81083813	0.692255	GGCAGUG	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr8_+_28174649_28174794	0.627729	GGCAGUG	ENST00000301908.3|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr5_-_94620239_94620279	0.611638	GGCAGUG	ENST00000515393.1|MCTP1|ENSG00000175471.15|multiple C2 domains, transmembrane 1
hg19_v2_chr15_-_61521495_61521518	0.567096	GGCAGUG	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr6_+_21593972_21594071	0.563277	GGCAGUG	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr18_-_60987220_60987386	0.55993	GGCAGUG	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr5_+_110559784_110559803	0.535909	GGCAGUG	ENST00000282356.4|CAMK4|ENSG00000152495.6|calcium/calmodulin-dependent protein kinase IV
hg19_v2_chr10_-_62149433_62149488	0.4919	GGCAGUG	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_+_169312350_169312372	0.469284	GGCAGUG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr14_-_99737565_99737617	0.451316	GGCAGUG	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr17_-_61777459_61777502	0.448623	GGCAGUG	ENST00000578993.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000583211.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000259006.3|LIMD2|ENSG00000136490.4|LIM domain containing 2
hg19_v2_chr5_+_49961727_49961740	0.428206	GGCAGUG	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr5_-_175964366_175964429	0.426325	GGCAGUG	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chrX_-_110655391_110655449	0.425431	GGCAGUG	ENST00000356915.2|DCX|ENSG00000077279.12|doublecortin 	ENST00000356220.3|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr1_+_16174280_16174365	0.410132	GGCAGUG	ENST00000375759.3|SPEN|ENSG00000065526.6|spen family transcriptional repressor
hg19_v2_chr9_-_139440314_139440314	0.406355	GGCAGUG	ENST00000277541.6|NOTCH1|ENSG00000148400.9|notch 1
hg19_v2_chr22_+_40297079_40297104	0.40482	GGCAGUG	ENST00000344138.4|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000543252.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr12_+_27396901_27397108	0.404026	GGCAGUG	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr2_+_120517174_120517207	0.395236	GGCAGUG	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chrX_+_109246285_109246352	0.394725	GGCAGUG	ENST00000372073.1|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000372068.2|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000288381.4|TMEM164|ENSG00000157600.7|transmembrane protein 164
hg19_v2_chr8_-_57123815_57123867	0.368057	GGCAGUG	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr11_+_92085262_92085262	0.360635	GGCAGUG	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr18_+_55102917_55102985	0.36038	GGCAGUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr22_+_40573921_40573946	0.352141	GGCAGUG	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr1_-_154842741_154842772	0.326277	GGCAGUG	ENST00000271915.4|KCNN3|ENSG00000143603.14|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
hg19_v2_chr9_+_100745615_100745648	0.324697	GGCAGUG	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chrX_+_23352133_23352229	0.317684	GGCAGUG	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr11_+_46354455_46354485	0.315637	GGCAGUG	ENST00000343674.6|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr10_+_105127704_105127749	0.305086	GGCAGUG	ENST00000369839.3|TAF5|ENSG00000148835.9|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 	ENST00000351396.4|TAF5|ENSG00000148835.9|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
hg19_v2_chr12_-_95611149_95611249	0.304533	GGCAGUG	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr9_+_126773880_126773895	0.288053	GGCAGUG	ENST00000373615.4|LHX2|ENSG00000106689.6|LIM homeobox 2
hg19_v2_chr11_-_119599794_119599857	0.287988	GGCAGUG	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr5_+_133861790_133861829	0.272305	GGCAGUG	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr16_+_87636474_87636533	0.271492	GGCAGUG	ENST00000284262.2|JPH3|ENSG00000154118.8|junctophilin 3
hg19_v2_chr14_+_60715928_60716007	0.270479	GGCAGUG	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr11_+_65405556_65405623	0.267903	GGCAGUG	ENST00000534313.1|SIPA1|ENSG00000213445.4|signal-induced proliferation-associated 1 	ENST00000533361.1|SIPA1|ENSG00000213445.4|signal-induced proliferation-associated 1 	ENST00000526137.1|SIPA1|ENSG00000213445.4|signal-induced proliferation-associated 1
hg19_v2_chr8_+_42752053_42752154	0.258389	GGCAGUG	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chrX_+_24483338_24483573	0.254523	GGCAGUG	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
hg19_v2_chr17_+_26646121_26646133	0.253068	GGCAGUG	ENST00000226230.6|TMEM97|ENSG00000109084.9|transmembrane protein 97
hg19_v2_chr7_-_139876812_139876860	0.251724	GGCAGUG	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr15_+_66679155_66679258	0.24923	GGCAGUG	ENST00000307102.5|MAP2K1|ENSG00000169032.5|mitogen-activated protein kinase kinase 1
hg19_v2_chr16_+_56225248_56225307	0.247172	GGCAGUG	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr6_+_96463840_96463892	0.243684	GGCAGUG	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr8_+_102504651_102504683	0.242488	GGCAGUG	ENST00000251808.3|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila) 	ENST00000521085.1|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila)
hg19_v2_chr3_+_25469724_25469773	0.240128	GGCAGUG	ENST00000437042.2|RARB|ENSG00000077092.14|retinoic acid receptor, beta
hg19_v2_chr7_+_107110488_107110515	0.239808	GGCAGUG	ENST00000304402.4|GPR22|ENSG00000172209.4|G protein-coupled receptor 22
hg19_v2_chr3_-_48229846_48229918	0.2385	GGCAGUG	ENST00000302506.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000351231.3|CDC25A|ENSG00000164045.7|cell division cycle 25A 	ENST00000437972.1|CDC25A|ENSG00000164045.7|cell division cycle 25A
hg19_v2_chr2_+_26915584_26915634	0.235982	GGCAGUG	ENST00000302909.3|KCNK3|ENSG00000171303.5|potassium channel, subfamily K, member 3
hg19_v2_chr9_-_101471479_101471522	0.235365	GGCAGUG	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr18_+_55711575_55711628	0.235255	GGCAGUG	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr21_+_35445827_35445886	0.233843	GGCAGUG	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chrX_-_151619746_151619830	0.233209	GGCAGUG	ENST00000370314.4|GABRA3|ENSG00000011677.8|gamma-aminobutyric acid (GABA) A receptor, alpha 3
hg19_v2_chr7_-_71801980_71802013	0.233149	GGCAGUG	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr3_-_141868357_141868393	0.23091	GGCAGUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr1_+_162039558_162039587	0.220355	GGCAGUG	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr7_+_20370746_20370778	0.220072	GGCAGUG	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr4_+_75480629_75480629	0.219216	GGCAGUG	ENST00000380846.3|AREGB|ENSG00000205595.3|amphiregulin B
hg19_v2_chr4_+_144257915_144258009	0.219107	GGCAGUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr10_+_112631547_112631596	0.217979	GGCAGUG	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr5_-_98262240_98262240	0.216722	GGCAGUG	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr12_-_14133053_14133159	0.216213	GGCAGUG	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr1_-_55680762_55680786	0.213543	GGCAGUG	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr7_-_44924939_44924993	0.209471	GGCAGUG	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr20_-_10654639_10654694	0.209358	GGCAGUG	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr2_+_191273052_191273121	0.20701	GGCAGUG	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr1_+_207627575_207627683	0.204254	GGCAGUG	ENST00000367058.3|CR2|ENSG00000117322.12|complement component (3d/Epstein Barr virus) receptor 2 	ENST00000367057.3|CR2|ENSG00000117322.12|complement component (3d/Epstein Barr virus) receptor 2 	ENST00000367059.3|CR2|ENSG00000117322.12|complement component (3d/Epstein Barr virus) receptor 2
hg19_v2_chr5_+_127419449_127419540	0.203597	GGCAGUG	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr4_+_99916765_99916776	0.203209	GGCAGUG	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr15_-_52861394_52861436	0.20278	GGCAGUG	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr17_-_1083078_1083294	0.19989	GGCAGUG	ENST00000574266.1|ABR|ENSG00000159842.10|active BCR-related 	ENST00000302538.5|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr12_+_20522179_20522203	0.199144	GGCAGUG	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr8_+_76452097_76452126	0.199133	GGCAGUG	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr7_-_128695147_128695203	0.198919	GGCAGUG	ENST00000482320.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000393245.1|TNPO3|ENSG00000064419.9|transportin 3 	ENST00000471234.1|TNPO3|ENSG00000064419.9|transportin 3
hg19_v2_chr2_-_68479614_68479685	0.198193	GGCAGUG	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr17_-_4269768_4269835	0.194381	GGCAGUG	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr6_-_6007200_6007226	0.194092	GGCAGUG	ENST00000244766.2|NRN1|ENSG00000124785.4|neuritin 1
hg19_v2_chr3_-_113465065_113465147	0.192243	GGCAGUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr2_-_40679186_40679297	0.18907	GGCAGUG	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr1_-_150669500_150669602	0.187036	GGCAGUG	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr2_-_201936302_201936416	0.183997	GGCAGUG	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr7_+_138916231_138916231	0.182826	GGCAGUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr10_+_82213904_82213922	0.182655	GGCAGUG	ENST00000429989.3|TSPAN14|ENSG00000108219.10|tetraspanin 14
hg19_v2_chr11_+_65837907_65837925	0.181321	GGCAGUG	ENST00000320580.4|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr5_-_150948414_150948505	0.181292	GGCAGUG	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr1_+_32757668_32757713	0.180539	GGCAGUG	ENST00000373548.3|HDAC1|ENSG00000116478.7|histone deacetylase 1
hg19_v2_chr9_-_20622478_20622542	0.179651	GGCAGUG	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr17_-_62207485_62207511	0.17918	GGCAGUG	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chr11_+_107461948_107462009	0.176768	GGCAGUG	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr1_+_66797687_66797884	0.175055	GGCAGUG	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr3_-_135914615_135914701	0.174944	GGCAGUG	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr7_-_82073109_82073150	0.173956	GGCAGUG	ENST00000356860.3|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr3_-_176914238_176914277	0.172844	GGCAGUG	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr12_-_57030115_57030177	0.17248	GGCAGUG	ENST00000379441.3|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000179765.5|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A 	ENST00000551812.1|BAZ2A|ENSG00000076108.7|bromodomain adjacent to zinc finger domain, 2A
hg19_v2_chr3_-_50540854_50540887	0.171883	GGCAGUG	ENST00000423994.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000424201.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000479441.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000429770.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg19_v2_chr4_-_109089573_109089585	0.170887	GGCAGUG	ENST00000265165.1|LEF1|ENSG00000138795.5|lymphoid enhancer-binding factor 1
hg19_v2_chr22_-_38902325_38902347	0.170583	GGCAGUG	ENST00000396821.3|DDX17|ENSG00000100201.14|DEAD (Asp-Glu-Ala-Asp) box helicase 17 	ENST00000381633.3|DDX17|ENSG00000100201.14|DEAD (Asp-Glu-Ala-Asp) box helicase 17
hg19_v2_chr19_+_54371114_54371180	0.16684	GGCAGUG	ENST00000448420.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000439000.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391770.4|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker 	ENST00000391771.1|MYADM|ENSG00000179820.11|myeloid-associated differentiation marker
hg19_v2_chr2_-_100721178_100721307	0.165039	GGCAGUG	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr1_+_165796753_165796776	0.164899	GGCAGUG	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr5_-_132299313_132299334	0.164626	GGCAGUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr16_+_68298405_68298463	0.162041	GGCAGUG	ENST00000219343.6|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566834.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 	ENST00000566454.1|SLC7A6|ENSG00000103064.9|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
hg19_v2_chr14_+_100705322_100705360	0.159308	GGCAGUG	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr6_+_136172820_136172846	0.159239	GGCAGUG	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr12_+_72148614_72148699	0.158954	GGCAGUG	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr19_-_6279932_6280000	0.158307	GGCAGUG	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr13_-_31038370_31038509	0.157917	GGCAGUG	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr8_-_82024290_82024310	0.156827	GGCAGUG	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr11_+_3819049_3819202	0.156556	GGCAGUG	ENST00000396986.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000300730.6|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000532535.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000396993.4|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000396991.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000532523.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000459679.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464261.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464906.2|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2 	ENST00000464441.1|PGAP2|ENSG00000148985.15|post-GPI attachment to proteins 2
hg19_v2_chr19_-_47616992_47617011	0.156483	GGCAGUG	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr11_+_64126614_64126665	0.153322	GGCAGUG	ENST00000528057.1|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000334205.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4 	ENST00000294261.4|RPS6KA4|ENSG00000162302.8|ribosomal protein S6 kinase, 90kDa, polypeptide 4
hg19_v2_chr2_-_208030647_208030689	0.15229	GGCAGUG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr9_-_3525968_3526016	0.150827	GGCAGUG	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr1_+_214161272_214161322	0.150676	GGCAGUG	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr7_+_2443202_2443260	0.149338	GGCAGUG	ENST00000258711.6|CHST12|ENSG00000136213.7|carbohydrate (chondroitin 4) sulfotransferase 12
hg19_v2_chr11_-_67236691_67236748	0.149129	GGCAGUG	ENST00000544903.1|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000308022.2|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000393877.3|TMEM134|ENSG00000172663.4|transmembrane protein 134 	ENST00000452789.2|TMEM134|ENSG00000172663.4|transmembrane protein 134
hg19_v2_chr22_-_29784519_29784576	0.147245	GGCAGUG	ENST00000357586.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000356015.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000432560.2|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit 	ENST00000317368.7|AP1B1|ENSG00000100280.12|adaptor-related protein complex 1, beta 1 subunit
hg19_v2_chr7_+_145813453_145813557	0.146761	GGCAGUG	ENST00000361727.3|CNTNAP2|ENSG00000174469.13|contactin associated protein-like 2
hg19_v2_chr2_-_166930131_166930149	0.146321	GGCAGUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr9_-_135996537_135996563	0.14573	GGCAGUG	ENST00000372050.3|RALGDS|ENSG00000160271.10|ral guanine nucleotide dissociation stimulator 	ENST00000372047.3|RALGDS|ENSG00000160271.10|ral guanine nucleotide dissociation stimulator
hg19_v2_chr14_-_55369525_55369570	0.142447	GGCAGUG	ENST00000543643.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000536224.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000395514.1|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000491895.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1
hg19_v2_chr9_+_102668915_102669024	0.139567	GGCAGUG	ENST00000259400.6|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000531035.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000525640.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000534052.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000526607.1|STX17|ENSG00000136874.6|syntaxin 17
hg19_v2_chr4_+_47033345_47033377	0.134212	GGCAGUG	ENST00000295454.3|GABRB1|ENSG00000163288.9|gamma-aminobutyric acid (GABA) A receptor, beta 1
hg19_v2_chr17_+_29718642_29718656	0.133855	GGCAGUG	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr2_-_122042770_122042785	0.133597	GGCAGUG	ENST00000263707.5|TFCP2L1|ENSG00000115112.7|transcription factor CP2-like 1
hg19_v2_chr2_+_105471969_105471969	0.131604	GGCAGUG	ENST00000361360.2|POU3F3|ENSG00000198914.2|POU class 3 homeobox 3
hg19_v2_chr7_-_93204033_93204043	0.13007	GGCAGUG	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr14_+_29234870_29235050	0.128963	GGCAGUG	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr10_+_95517566_95517610	0.128481	GGCAGUG	ENST00000542308.1|LGI1|ENSG00000108231.7|leucine-rich, glioma inactivated 1
hg19_v2_chr13_+_42622781_42622889	0.124917	GGCAGUG	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr3_+_38495333_38495422	0.120148	GGCAGUG	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chrX_+_118108571_118108589	0.119433	GGCAGUG	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr3_+_73045936_73046128	0.119312	GGCAGUG	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr17_+_12692774_12692863	0.118794	GGCAGUG	ENST00000379672.5|ARHGAP44|ENSG00000006740.12|Rho GTPase activating protein 44 	ENST00000340825.3|ARHGAP44|ENSG00000006740.12|Rho GTPase activating protein 44
hg19_v2_chr2_+_203499901_203499911	0.116935	GGCAGUG	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr18_-_65184217_65184217	0.116085	GGCAGUG	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr1_+_167190066_167190156	0.115741	GGCAGUG	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr3_+_39851094_39851151	0.113592	GGCAGUG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr8_-_133493200_133493352	0.110865	GGCAGUG	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr1_-_151688528_151688667	0.11013	GGCAGUG	ENST00000290585.4|CELF3|ENSG00000159409.10|CUGBP, Elav-like family member 3
hg19_v2_chrX_+_64708615_64708615	0.109013	GGCAGUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr4_-_185747188_185747273	0.107861	GGCAGUG	ENST00000507295.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000504900.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000281455.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000454703.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr8_-_95908902_95908927	0.107293	GGCAGUG	ENST00000520509.1|CCNE2|ENSG00000175305.12|cyclin E2
hg19_v2_chr14_-_64194745_64194799	0.106249	GGCAGUG	ENST00000247225.6|SGPP1|ENSG00000126821.7|sphingosine-1-phosphate phosphatase 1
hg19_v2_chr16_+_30077055_30077093	0.105018	GGCAGUG	ENST00000564595.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000569798.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr5_+_142149955_142150000	0.103407	GGCAGUG	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr13_-_27334879_27334930	0.103202	GGCAGUG	ENST00000405846.3|GPR12|ENSG00000132975.6|G protein-coupled receptor 12
hg19_v2_chr10_-_46030841_46030846	0.101774	GGCAGUG	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr20_+_32581452_32581520	0.101744	GGCAGUG	ENST00000375114.3|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein 	ENST00000448364.1|RALY|ENSG00000125970.7|RALY heterogeneous nuclear ribonucleoprotein
hg19_v2_chr17_-_27224621_27224759	0.10041	GGCAGUG	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr2_+_45168875_45168916	0.0995402	GGCAGUG	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chr1_+_87380299_87380475	0.0992238	GGCAGUG	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr7_+_142985308_142985453	0.0989776	GGCAGUG	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr14_-_90085458_90085557	0.0988775	GGCAGUG	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr19_-_46296011_46296061	0.0983197	GGCAGUG	ENST00000377735.3|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000270223.6|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing
hg19_v2_chr5_+_172483347_172483407	0.0976193	GGCAGUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr15_+_41709302_41709348	0.0966089	GGCAGUG	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr1_-_154474589_154474589	0.0950064	GGCAGUG	ENST00000304760.2|SHE|ENSG00000169291.5|Src homology 2 domain containing E
hg19_v2_chrX_-_110513703_110513751	0.0948541	GGCAGUG	ENST00000324068.1|CAPN6|ENSG00000077274.7|calpain 6
hg19_v2_chr14_-_68162464_68162531	0.0936345	GGCAGUG	ENST00000553384.1|RDH11|ENSG00000072042.8|retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 	ENST00000557726.1|RDH11|ENSG00000072042.8|retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 	ENST00000381346.4|RDH11|ENSG00000072042.8|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
hg19_v2_chr17_+_61627814_61627871	0.093201	GGCAGUG	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr19_-_44143939_44144010	0.0923312	GGCAGUG	ENST00000222374.2|CADM4|ENSG00000105767.2|cell adhesion molecule 4
hg19_v2_chr7_+_50344289_50344378	0.0919167	GGCAGUG	ENST00000413698.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000359197.5|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000331340.3|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000357364.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000343574.5|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000349824.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000346667.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000440768.2|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr12_+_104458235_104458344	0.091395	GGCAGUG	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr7_+_28452130_28452154	0.0904608	GGCAGUG	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr14_-_31495569_31495636	0.0875765	GGCAGUG	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr2_+_16080659_16080686	0.0861214	GGCAGUG	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr7_+_87563458_87563489	0.0842339	GGCAGUG	ENST00000398204.4|ADAM22|ENSG00000008277.10|ADAM metallopeptidase domain 22
hg19_v2_chr3_-_53381539_53381654	0.0838079	GGCAGUG	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr6_-_30585009_30585028	0.0813283	GGCAGUG	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr17_-_41977964_41978013	0.0810464	GGCAGUG	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr12_+_1800179_1800250	0.0801646	GGCAGUG	ENST00000357103.4|ADIPOR2|ENSG00000006831.9|adiponectin receptor 2
hg19_v2_chr1_-_41131326_41131400	0.0799247	GGCAGUG	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr12_+_121837844_121837892	0.0797868	GGCAGUG	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr11_-_134281812_134281828	0.0797857	GGCAGUG	ENST00000392580.1|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) 	ENST00000312527.4|B3GAT1|ENSG00000109956.8|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
hg19_v2_chr19_+_8274204_8274265	0.0791844	GGCAGUG	ENST00000561053.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000251363.5|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559450.1|CERS4|ENSG00000090661.7|ceramide synthase 4 	ENST00000559336.1|CERS4|ENSG00000090661.7|ceramide synthase 4
hg19_v2_chr15_-_42264702_42264812	0.0745503	GGCAGUG	ENST00000220325.4|EHD4|ENSG00000103966.5|EH-domain containing 4
hg19_v2_chr1_+_28052456_28052515	0.0742622	GGCAGUG	ENST00000373954.6|FAM76A|ENSG00000009780.11|family with sequence similarity 76, member A 	ENST00000419687.2|FAM76A|ENSG00000009780.11|family with sequence similarity 76, member A
hg19_v2_chr7_-_92463210_92463231	0.0728894	GGCAGUG	ENST00000265734.4|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr11_-_22851367_22851411	0.0717702	GGCAGUG	ENST00000354193.4|SVIP|ENSG00000198168.4|small VCP/p97-interacting protein
hg19_v2_chr19_-_14316980_14316999	0.0714528	GGCAGUG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr2_+_232651124_232651176	0.0678262	GGCAGUG	ENST00000350033.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000412591.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000410017.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000373608.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B
hg19_v2_chr17_-_71640227_71640228	0.0675815	GGCAGUG	ENST00000388726.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2 	ENST00000392650.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2
hg19_v2_chr5_+_149109825_149109907	0.0672944	GGCAGUG	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr6_+_116892530_116892592	0.0672179	GGCAGUG	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr8_+_90914757_90914856	0.0669813	GGCAGUG	ENST00000451899.2|OSGIN2|ENSG00000164823.5|oxidative stress induced growth inhibitor family member 2
hg19_v2_chr3_-_107809816_107809885	0.0664204	GGCAGUG	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr9_-_102861267_102861322	0.0656974	GGCAGUG	ENST00000262455.6|ERP44|ENSG00000023318.7|endoplasmic reticulum protein 44
hg19_v2_chr16_+_66878814_66878843	0.0655276	GGCAGUG	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr16_+_29817841_29817917	0.0652801	GGCAGUG	ENST00000322945.6|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor) 	ENST00000562337.1|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor) 	ENST00000566906.2|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor) 	ENST00000563402.1|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor) 	ENST00000219782.6|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor)
hg19_v2_chr9_+_34958254_34958321	0.0648755	GGCAGUG	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr10_+_75936444_75936537	0.0615578	GGCAGUG	ENST00000372734.3|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000541550.1|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr8_+_77593448_77593471	0.0608095	GGCAGUG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr15_+_79724858_79724858	0.0604886	GGCAGUG	ENST00000305428.3|KIAA1024|ENSG00000169330.4|KIAA1024
hg19_v2_chr2_-_70995307_70995344	0.0601099	GGCAGUG	ENST00000264436.4|ADD2|ENSG00000075340.18|adducin 2 (beta) 	ENST00000355733.3|ADD2|ENSG00000075340.18|adducin 2 (beta) 	ENST00000447731.2|ADD2|ENSG00000075340.18|adducin 2 (beta) 	ENST00000430656.1|ADD2|ENSG00000075340.18|adducin 2 (beta) 	ENST00000413157.2|ADD2|ENSG00000075340.18|adducin 2 (beta)
hg19_v2_chr9_+_129677039_129677119	0.0599203	GGCAGUG	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr15_+_91473403_91473422	0.0597989	GGCAGUG	ENST00000394275.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr5_+_54455946_54456019	0.059612	GGCAGUG	ENST00000503787.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000296734.6|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative) 	ENST00000515370.1|GPX8|ENSG00000164294.9|glutathione peroxidase 8 (putative)
hg19_v2_chr20_+_42875887_42875921	0.0589996	GGCAGUG	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
hg19_v2_chr10_+_71078595_71078677	0.0588437	GGCAGUG	ENST00000359426.6|HK1|ENSG00000156515.17|hexokinase 1
hg19_v2_chr21_+_45138941_45139084	0.0582494	GGCAGUG	ENST00000398081.1|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase 	ENST00000468090.1|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase 	ENST00000291565.4|PDXK|ENSG00000160209.14|pyridoxal (pyridoxine, vitamin B6) kinase
hg19_v2_chr17_+_42836329_42836399	0.0577053	GGCAGUG	ENST00000200557.6|ADAM11|ENSG00000073670.9|ADAM metallopeptidase domain 11
hg19_v2_chrX_-_19140677_19140760	0.057563	GGCAGUG	ENST00000357544.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379869.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000360279.4|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379873.2|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379878.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000354791.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379876.1|GPR64|ENSG00000173698.13|G protein-coupled receptor 64
hg19_v2_chr5_-_11904152_11904166	0.0571379	GGCAGUG	ENST00000304623.8|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000458100.2|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr6_-_116381918_116381977	0.05685	GGCAGUG	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr14_+_93651358_93651412	0.0544638	GGCAGUG	ENST00000415050.2|TMEM251|ENSG00000153485.5|transmembrane protein 251
hg19_v2_chr11_+_74660278_74660334	0.0531458	GGCAGUG	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr11_+_70116779_70116858	0.0516347	GGCAGUG	ENST00000253925.7|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 	ENST00000389547.3|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
hg19_v2_chr1_+_26737253_26737269	0.0513391	GGCAGUG	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr19_-_19739007_19739051	0.0507455	GGCAGUG	ENST00000586703.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000591042.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2 	ENST00000407877.3|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr7_-_105517021_105517050	0.050639	GGCAGUG	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr20_+_39765581_39765646	0.0501863	GGCAGUG	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr7_+_128864848_128864913	0.0500732	GGCAGUG	ENST00000325006.3|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2 	ENST00000446544.2|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr10_+_43572475_43572527	0.0499297	GGCAGUG	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr4_+_174089904_174089921	0.0494865	GGCAGUG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr3_+_11034403_11034492	0.0479	GGCAGUG	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr2_+_48541776_48541874	0.0476978	GGCAGUG	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr1_+_20208870_20209006	0.0471797	GGCAGUG	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr4_-_69215699_69215815	0.046888	GGCAGUG	ENST00000510746.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000344157.4|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000355665.3|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr20_+_49348081_49348096	0.044331	GGCAGUG	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr12_+_121124599_121124672	0.0426598	GGCAGUG	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr8_-_60031762_60031803	0.0416046	GGCAGUG	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chrX_-_119445263_119445298	0.0412362	GGCAGUG	ENST00000309720.5|TMEM255A|ENSG00000125355.11|transmembrane protein 255A
hg19_v2_chr10_+_64564469_64564535	0.0392572	GGCAGUG	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr11_+_64794875_64794983	0.0386076	GGCAGUG	ENST00000377244.3|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000534637.1|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000524831.1|SNX15|ENSG00000110025.8|sorting nexin 15
hg19_v2_chr8_+_17354587_17354610	0.0385241	GGCAGUG	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr10_+_105036909_105036920	0.0371817	GGCAGUG	ENST00000369849.4|INA|ENSG00000148798.5|internexin neuronal intermediate filament protein, alpha
hg19_v2_chr15_-_64648273_64648442	0.036972	GGCAGUG	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr17_+_26989109_26989248	0.0362062	GGCAGUG	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr15_+_52043758_52043809	0.0352448	GGCAGUG	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr3_-_33481835_33481905	0.0344601	GGCAGUG	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr1_+_26496362_26496457	0.0336077	GGCAGUG	ENST00000374266.5|ZNF593|ENSG00000142684.7|zinc finger protein 593 	ENST00000270812.5|ZNF593|ENSG00000142684.7|zinc finger protein 593
hg19_v2_chr14_-_75593708_75593783	0.0319804	GGCAGUG	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr1_+_205012293_205012326	0.0317954	GGCAGUG	ENST00000331830.4|CNTN2|ENSG00000184144.5|contactin 2 (axonal)
hg19_v2_chr5_+_179921430_179921461	0.0299218	GGCAGUG	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr7_-_143059845_143059866	0.0295451	GGCAGUG	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr20_+_10199468_10199516	0.0276891	GGCAGUG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr3_+_38206975_38207101	0.0272406	GGCAGUG	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr16_+_67063036_67063088	0.027038	GGCAGUG	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr1_-_21978312_21978363	0.0259638	GGCAGUG	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr5_-_138210977_138210999	0.0255315	GGCAGUG	ENST00000274711.6|LRRTM2|ENSG00000146006.7|leucine rich repeat transmembrane neuronal 2 	ENST00000521094.2|LRRTM2|ENSG00000146006.7|leucine rich repeat transmembrane neuronal 2
hg19_v2_chr17_+_30677136_30677205	0.0248442	GGCAGUG	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr17_-_37382105_37382125	0.0248341	GGCAGUG	ENST00000333461.5|STAC2|ENSG00000141750.6|SH3 and cysteine rich domain 2
hg19_v2_chr20_+_5107420_5107432	0.0245341	GGCAGUG	ENST00000460006.1|CDS2|ENSG00000101290.9|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
hg19_v2_chr11_+_64073699_64073918	0.024362	GGCAGUG	ENST00000405666.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000468670.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha
hg19_v2_chr20_+_30795664_30795743	0.0242567	GGCAGUG	ENST00000375749.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000375730.3|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1 	ENST00000539210.1|POFUT1|ENSG00000101346.7|protein O-fucosyltransferase 1
hg19_v2_chr5_-_141257954_141258006	0.0242318	GGCAGUG	ENST00000456271.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000394536.3|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000503492.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000287008.3|PCDH1|ENSG00000156453.9|protocadherin 1
hg19_v2_chr7_-_73133959_73134022	0.0241464	GGCAGUG	ENST00000395155.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395154.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000222812.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395156.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain)
hg19_v2_chr7_-_112727774_112727833	0.0238677	GGCAGUG	ENST00000297146.3|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000501255.2|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr12_+_52306113_52306194	0.0228621	GGCAGUG	ENST00000547400.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000550683.1|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1 	ENST00000419526.2|ACVRL1|ENSG00000139567.8|activin A receptor type II-like 1
hg19_v2_chr8_-_96281419_96281444	0.0218089	GGCAGUG	ENST00000286688.5|C8orf37|ENSG00000156172.5|chromosome 8 open reading frame 37
hg19_v2_chr1_+_3607228_3607250	0.0216467	GGCAGUG	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr2_+_73144604_73144654	0.0208684	GGCAGUG	ENST00000258106.6|EMX1|ENSG00000135638.9|empty spiracles homeobox 1
hg19_v2_chr1_-_235491462_235491534	0.0202593	GGCAGUG	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr16_-_17564738_17564834	0.0201523	GGCAGUG	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chrX_-_18372792_18372847	0.0200786	GGCAGUG	ENST00000251900.4|SCML2|ENSG00000102098.13|sex comb on midleg-like 2 (Drosophila)
hg19_v2_chr1_+_16693578_16693760	0.0198321	GGCAGUG	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr12_+_112563335_112563371	0.0191252	GGCAGUG	ENST00000549358.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000257604.5|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000548092.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000552896.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1
hg19_v2_chr5_+_176560742_176560926	0.0187199	GGCAGUG	ENST00000439151.2|NSD1|ENSG00000165671.14|nuclear receptor binding SET domain protein 1
hg19_v2_chr12_-_49504655_49504686	0.0181174	GGCAGUG	ENST00000551782.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like 	ENST00000267102.8|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr20_+_43029911_43029941	0.0176673	GGCAGUG	ENST00000443598.2|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000316099.4|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha 	ENST00000415691.2|HNF4A|ENSG00000101076.12|hepatocyte nuclear factor 4, alpha
hg19_v2_chr4_+_113970772_113970885	0.0176209	GGCAGUG	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr9_-_86571628_86571639	0.0172546	GGCAGUG	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr14_-_75389975_75390099	0.0164514	GGCAGUG	ENST00000555647.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1 	ENST00000557413.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr5_-_75919253_75919269	0.0161426	GGCAGUG	ENST00000296641.4|F2RL2|ENSG00000164220.6|coagulation factor II (thrombin) receptor-like 2
hg19_v2_chr2_-_74570520_74570547	0.0155054	GGCAGUG	ENST00000394019.2|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000346834.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000359484.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000423644.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000377634.4|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5 	ENST00000436454.1|SLC4A5|ENSG00000188687.11|solute carrier family 4 (sodium bicarbonate cotransporter), member 5
hg19_v2_chr16_+_69345243_69345312	0.013099	GGCAGUG	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr11_+_66025167_66025190	0.0129395	GGCAGUG	ENST00000394067.2|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000316924.5|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000421552.1|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000394078.1|KLC2|ENSG00000174996.7|kinesin light chain 2
hg19_v2_chr11_-_6462210_6462294	0.0122069	GGCAGUG	ENST00000265983.3|HPX|ENSG00000110169.6|hemopexin
hg19_v2_chr11_+_31391381_31391426	0.0113917	GGCAGUG	ENST00000465995.1|DNAJC24|ENSG00000170946.10|DnaJ (Hsp40) homolog, subfamily C, member 24 	ENST00000536040.1|DNAJC24|ENSG00000170946.10|DnaJ (Hsp40) homolog, subfamily C, member 24
hg19_v2_chr5_+_151151471_151151496	0.0113287	GGCAGUG	ENST00000394123.3|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1 	ENST00000543466.1|G3BP1|ENSG00000145907.10|GTPase activating protein (SH3 domain) binding protein 1
hg19_v2_chr9_-_73736511_73736546	0.0109662	GGCAGUG	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr19_-_2456922_2456994	0.0108035	GGCAGUG	ENST00000582871.1|LMNB2|ENSG00000176619.6|lamin B2 	ENST00000325327.3|LMNB2|ENSG00000176619.6|lamin B2
hg19_v2_chr11_+_117049445_117049466	0.0105765	GGCAGUG	ENST00000324225.4|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2 	ENST00000532960.1|SIDT2|ENSG00000149577.11|SID1 transmembrane family, member 2
hg19_v2_chr1_+_229406847_229406935	0.0105645	GGCAGUG	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr10_+_112679301_112679346	0.010156	GGCAGUG	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr15_-_67546963_67547074	0.00998684	GGCAGUG	ENST00000561452.1|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein 	ENST00000261880.5|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein
hg19_v2_chr2_+_122513109_122513293	0.00921201	GGCAGUG	ENST00000389682.3|TSN|ENSG00000211460.7|translin 	ENST00000536142.1|TSN|ENSG00000211460.7|translin
hg19_v2_chr8_-_42698433_42698486	0.00911432	GGCAGUG	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr2_-_200322723_200322819	0.00895302	GGCAGUG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr21_-_34100244_34100277	0.00819608	GGCAGUG	ENST00000382491.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000357345.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000429236.1|SYNJ1|ENSG00000159082.13|synaptojanin 1
hg19_v2_chr9_-_122131696_122131745	0.00762754	GGCAGUG	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr14_+_71374122_71374193	0.00649968	GGCAGUG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr12_-_27167233_27167367	0.0057465	GGCAGUG	ENST00000535819.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543803.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000535423.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000539741.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000343028.4|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000545600.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543088.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3
hg19_v2_chr1_-_70671216_70671303	0.00560276	GGCAGUG	ENST00000370952.3|LRRC40|ENSG00000066557.5|leucine rich repeat containing 40
hg19_v2_chr19_-_10514184_10514231	0.00507855	GGCAGUG	ENST00000589629.1|CDC37|ENSG00000105401.2|cell division cycle 37 	ENST00000222005.2|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr11_+_18416133_18416251	0.00471589	GGCAGUG	ENST00000227157.4|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000478970.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000495052.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr4_+_81951957_81952119	0.00448154	GGCAGUG	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr9_-_131534160_131534184	0.00268	GGCAGUG	ENST00000291900.2|ZER1|ENSG00000160445.6|zyg-11 related, cell cycle regulator
hg19_v2_chr1_+_109234907_109234996	0.0015678	GGCAGUG	ENST00000370025.4|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370022.5|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B 	ENST00000370021.1|PRPF38B|ENSG00000134186.7|pre-mRNA processing factor 38B
hg19_v2_chr15_+_71389281_71389306	0.00133224	GGCAGUG	ENST00000355327.3|THSD4|ENSG00000187720.10|thrombospondin, type I, domain containing 4
hg19_v2_chr3_+_50712672_50712703	0.00127531	GGCAGUG	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr12_+_49372251_49372398	0.0011172	GGCAGUG	ENST00000293549.3|WNT1|ENSG00000125084.7|wingless-type MMTV integration site family, member 1
hg19_v2_chr11_-_117699413_117699434	0.000842972	GGCAGUG	ENST00000528014.1|FXYD2|ENSG00000137731.9|FXYD domain containing ion transport regulator 2
hg19_v2_chr12_-_13248732_13248744	0.000819696	GGCAGUG	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr16_-_67840442_67840555	0.000393026	GGCAGUG	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
