hg19_v2_chr22_+_23247030_23247061	3.20605	GLI2	ENST00000390324.2|IGLJ3|ENSG00000211678.2|immunoglobulin lambda joining 3
hg19_v2_chr13_-_46756351_46756459	2.66821	GLI2	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr22_+_23248512_23248512	2.55991	GLI2	ENST00000390325.2|IGLC3|ENSG00000211679.2|immunoglobulin lambda constant 3 (Kern-Oz+ marker)
hg19_v2_chr22_+_23243156_23243156	1.84294	GLI2	ENST00000390323.2|IGLC2|ENSG00000211677.2|immunoglobulin lambda constant 2 (Kern-Oz- marker)
hg19_v2_chr19_+_45417812_45417869	1.72884	GLI2	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr14_-_106209368_106209408	1.61003	GLI2	ENST00000390548.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker) 	ENST00000390549.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker) 	ENST00000390542.2|IGHG1|ENSG00000211896.2|immunoglobulin heavy constant gamma 1 (G1m marker)
hg19_v2_chr14_-_71107921_71108085	1.59911	GLI2	ENST00000553982.1|CTD-2540L5.5|ENSG00000259115.1|CTD-2540L5.5	ENST00000500016.1|CTD-2540L5.6|ENSG00000245466.1|CTD-2540L5.6
hg19_v2_chr21_-_46330545_46330741	1.50397	GLI2	ENST00000320216.6|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000397852.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr19_+_45418067_45418126	1.48706	GLI2	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr19_+_45417504_45417589	1.42216	GLI2	ENST00000588750.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000588802.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr6_+_24495067_24495096	1.40338	GLI2	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr22_+_23241661_23241804	1.33025	GLI2	ENST00000390322.2|IGLJ2|ENSG00000211676.2|immunoglobulin lambda joining 2
hg19_v2_chr19_+_18208603_18208614	1.31261	GLI2	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr12_+_7055767_7055804	1.30499	GLI2	ENST00000447931.2|PTPN6|ENSG00000111679.12|protein tyrosine phosphatase, non-receptor type 6
hg19_v2_chr1_-_47697387_47697457	1.29894	GLI2	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr1_-_21948906_21949075	1.23286	GLI2	ENST00000374761.2|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000599760.1|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chrX_-_52683950_52683950	1.22309	GLI2	ENST00000298181.5|SSX7|ENSG00000187754.8|synovial sarcoma, X breakpoint 7
hg19_v2_chr7_-_92465868_92465922	1.17877	GLI2	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr14_-_55369525_55369570	1.15994	GLI2	ENST00000543643.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000536224.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000395514.1|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000491895.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1
hg19_v2_chr7_+_64363625_64363667	1.12124	GLI2	ENST00000476120.1|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000319636.5|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000545510.1|ZNF273|ENSG00000198039.7|zinc finger protein 273
hg19_v2_chrX_+_12809463_12809607	1.11709	GLI2	ENST00000380663.3|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000380668.5|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000398491.2|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000489404.1|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2
hg19_v2_chr19_-_44285401_44285446	1.11205	GLI2	ENST00000262888.3|KCNN4|ENSG00000104783.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
hg19_v2_chr19_-_10450328_10450499	1.11113	GLI2	ENST00000160262.5|ICAM3|ENSG00000076662.5|intercellular adhesion molecule 3
hg19_v2_chr6_-_32784687_32784839	1.08398	GLI2	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr1_+_6105974_6105985	1.08325	GLI2	ENST00000378083.3|KCNAB2|ENSG00000069424.10|potassium voltage-gated channel, shaker-related subfamily, beta member 2
hg19_v2_chr11_+_68451943_68451986	1.07783	GLI2	ENST00000265643.3|GAL|ENSG00000069482.6|galanin/GMAP prepropeptide
hg19_v2_chr14_+_71108460_71108508	1.07603	GLI2	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr7_-_994302_994333	1.05703	GLI2	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr19_+_45417921_45417970	1.038	GLI2	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chrX_-_52546033_52546033	1.03572	GLI2	ENST00000375567.3|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr18_-_60987220_60987386	1.01273	GLI2	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr3_-_119278376_119278403	0.997744	GLI2	ENST00000478182.1|CD80|ENSG00000121594.7|CD80 molecule
hg19_v2_chr8_+_96145974_96146041	0.964244	GLI2	ENST00000315367.3|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr2_-_169746878_169746970	0.956875	GLI2	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr11_-_34937858_34937944	0.949424	GLI2	ENST00000278359.5|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr8_-_145642267_145642279	0.924932	GLI2	ENST00000301305.3|SLC39A4|ENSG00000147804.5|solute carrier family 39 (zinc transporter), member 4
hg19_v2_chrX_-_52736211_52736239	0.923247	GLI2	ENST00000336777.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2 	ENST00000337502.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2
hg19_v2_chr1_+_70876891_70876917	0.921765	GLI2	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr12_+_65174519_65174589	0.916969	GLI2	ENST00000229088.6|TBC1D30|ENSG00000111490.8|TBC1 domain family, member 30
hg19_v2_chr6_-_133084580_133084605	0.916573	GLI2	ENST00000525270.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000530536.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000524919.1|VNN2|ENSG00000112303.9|vanin 2
hg19_v2_chr3_+_133118839_133118925	0.913956	GLI2	ENST00000302334.2|BFSP2|ENSG00000170819.4|beaded filament structural protein 2, phakinin
hg19_v2_chr1_-_21978312_21978363	0.899825	GLI2	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr15_+_81589254_81589272	0.892971	GLI2	ENST00000394652.2|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr14_-_106845789_106845851	0.882706	GLI2	ENST00000390617.2|IGHV3-35|ENSG00000211957.2|immunoglobulin heavy variable 3-35 (non-functional)
hg19_v2_chr7_-_73668692_73668774	0.866503	GLI2	ENST00000352131.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa 	ENST00000055077.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa
hg19_v2_chr21_-_40555393_40555419	0.854028	GLI2	ENST00000380900.2|PSMG1|ENSG00000183527.7|proteasome (prosome, macropain) assembly chaperone 1
hg19_v2_chr10_-_52383644_52383743	0.850938	GLI2	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr1_-_9132311_9132325	0.850571	GLI2	ENST00000474145.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chrX_-_78622805_78622877	0.843161	GLI2	ENST00000373298.2|ITM2A|ENSG00000078596.6|integral membrane protein 2A
hg19_v2_chr11_-_34938039_34938050	0.842261	GLI2	ENST00000395787.3|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr9_-_130742792_130742821	0.842232	GLI2	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr1_-_32403370_32403387	0.83532	GLI2	ENST00000534796.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr20_+_30639991_30640001	0.834262	GLI2	ENST00000534862.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000538448.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375862.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr20_+_30640004_30640091	0.830896	GLI2	ENST00000520553.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000518730.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375852.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr16_+_31885079_31885165	0.828468	GLI2	ENST00000300870.10|ZNF267|ENSG00000185947.10|zinc finger protein 267 	ENST00000394846.3|ZNF267|ENSG00000185947.10|zinc finger protein 267
hg19_v2_chr6_+_26240561_26240628	0.823641	GLI2	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr2_-_197041193_197041227	0.82181	GLI2	ENST00000409228.1|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr17_+_76164639_76164699	0.821134	GLI2	ENST00000225777.3|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000585591.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000589711.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000588282.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000589168.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2
hg19_v2_chr15_+_81591757_81591780	0.814083	GLI2	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr19_-_6481776_6481819	0.810169	GLI2	ENST00000543576.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000590173.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000381480.2|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C
hg19_v2_chrX_-_48271344_48271344	0.80473	GLI2	ENST00000376884.2|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B 	ENST00000396928.1|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B
hg19_v2_chr9_+_108456800_108456849	0.803316	GLI2	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr1_-_9131776_9131791	0.79494	GLI2	ENST00000484798.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr5_+_126112794_126112928	0.767803	GLI2	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr19_-_2050852_2050895	0.765267	GLI2	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr1_-_182573514_182573543	0.765078	GLI2	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr19_-_2702681_2702707	0.759795	GLI2	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr7_-_91875109_91875260	0.759502	GLI2	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr17_-_79995553_79995608	0.757272	GLI2	ENST00000581584.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000577712.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000582900.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000579155.1|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase 	ENST00000306869.2|DCXR|ENSG00000169738.3|dicarbonyl/L-xylulose reductase
hg19_v2_chr17_+_27071002_27071103	0.754108	GLI2	ENST00000262395.5|TRAF4|ENSG00000076604.10|TNF receptor-associated factor 4 	ENST00000422344.1|TRAF4|ENSG00000076604.10|TNF receptor-associated factor 4 	ENST00000444415.3|TRAF4|ENSG00000076604.10|TNF receptor-associated factor 4 	ENST00000262396.6|TRAF4|ENSG00000076604.10|TNF receptor-associated factor 4
hg19_v2_chr19_+_23299777_23299844	0.743117	GLI2	ENST00000597761.2|ZNF730|ENSG00000183850.9|zinc finger protein 730
hg19_v2_chr5_+_89770696_89770727	0.738216	GLI2	ENST00000504930.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000514483.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr9_+_90112767_90112808	0.726029	GLI2	ENST00000408954.3|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr3_-_72496035_72496069	0.714704	GLI2	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr6_+_44215603_44215666	0.713071	GLI2	ENST00000371554.1|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr12_-_125348448_125348472	0.70901	GLI2	ENST00000339570.5|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1
hg19_v2_chr8_-_145331153_145331153	0.705365	GLI2	ENST00000377412.4|KM-PA-2|ENSG00000204775.4|KM-PA-2 protein; Uncharacterized protein
hg19_v2_chr12_-_48099754_48099769	0.704845	GLI2	ENST00000380650.4|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chr20_+_42295745_42295797	0.700599	GLI2	ENST00000396863.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2 	ENST00000217026.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2
hg19_v2_chr6_-_16761678_16761721	0.69551	GLI2	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr1_+_70876926_70877066	0.691606	GLI2	ENST00000370938.3|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase) 	ENST00000346806.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chrX_+_48242863_48242939	0.688948	GLI2	ENST00000376886.2|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4 	ENST00000375517.3|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4
hg19_v2_chr18_+_13218769_13218792	0.688261	GLI2	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr5_+_89770664_89770688	0.68767	GLI2	ENST00000503973.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000399107.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr5_-_89705537_89705610	0.68426	GLI2	ENST00000522864.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522083.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522565.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522842.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000283122.3|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3
hg19_v2_chr3_+_127317066_127317066	0.683886	GLI2	ENST00000265056.7|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr9_+_131218336_131218366	0.679634	GLI2	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr3_-_25824872_25824913	0.677296	GLI2	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr16_+_88872176_88872176	0.676964	GLI2	ENST00000569140.1|CDT1|ENSG00000167513.4|chromatin licensing and DNA replication factor 1
hg19_v2_chr11_+_59824127_59824161	0.672896	GLI2	ENST00000278865.3|MS4A3|ENSG00000149516.9|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v2_chr19_-_23941680_23941704	0.66989	GLI2	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr18_+_12948000_12948057	0.667871	GLI2	ENST00000585730.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000399892.2|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000589446.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000587761.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae)
hg19_v2_chr22_-_29137771_29137837	0.664976	GLI2	ENST00000439200.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000405598.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000398017.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000425190.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000348295.3|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382578.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382565.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382566.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382580.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000328354.6|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chrX_-_141293047_141293082	0.664483	GLI2	ENST00000247452.3|MAGEC2|ENSG00000046774.9|melanoma antigen family C, 2
hg19_v2_chr9_+_90112741_90112761	0.66287	GLI2	ENST00000469640.2|DAPK1|ENSG00000196730.8|death-associated protein kinase 1
hg19_v2_chr16_+_67063262_67063364	0.66147	GLI2	ENST00000565389.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr20_+_44746885_44746914	0.656492	GLI2	ENST00000372285.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr11_-_57103327_57103372	0.656465	GLI2	ENST00000529002.1|SSRP1|ENSG00000149136.3|structure specific recognition protein 1 	ENST00000278412.2|SSRP1|ENSG00000149136.3|structure specific recognition protein 1
hg19_v2_chr22_+_39378346_39378366	0.654683	GLI2	ENST00000407298.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr6_+_44214824_44214841	0.645191	GLI2	ENST00000371646.5|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1 	ENST00000353801.3|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr20_+_44746939_44746962	0.643845	GLI2	ENST00000372276.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr1_+_200993071_200993094	0.635047	GLI2	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr16_-_3767551_3767598	0.633834	GLI2	ENST00000246957.5|TRAP1|ENSG00000126602.6|TNF receptor-associated protein 1
hg19_v2_chr5_+_172332220_172332371	0.626046	GLI2	ENST00000518247.1|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 	ENST00000326654.2|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chrX_-_48216101_48216142	0.625303	GLI2	ENST00000298396.2|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3 	ENST00000376893.3|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3
hg19_v2_chr22_+_39378375_39378428	0.624019	GLI2	ENST00000402182.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B 	ENST00000333467.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr17_+_58677539_58677610	0.623931	GLI2	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr5_+_154238149_154238267	0.619873	GLI2	ENST00000519430.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520671.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521583.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518028.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519404.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519394.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518775.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr1_+_156123359_156123398	0.619158	GLI2	ENST00000368284.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000368286.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000438830.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr1_+_156123318_156123358	0.617036	GLI2	ENST00000368285.3|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chrX_-_134305322_134305322	0.611992	GLI2	ENST00000276241.6|CXorf48|ENSG00000169551.8|cancer/testis antigen 55 	ENST00000344129.2|CXorf48|ENSG00000169551.8|cancer/testis antigen 55
hg19_v2_chr9_+_93589734_93589770	0.611188	GLI2	ENST00000375746.1|SYK|ENSG00000165025.10|spleen tyrosine kinase
hg19_v2_chr2_+_65215604_65215625	0.60736	GLI2	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr9_+_131218408_131218487	0.605406	GLI2	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr16_+_29802036_29802086	0.602559	GLI2	ENST00000561482.1|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000160827.4|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000569636.2|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000400750.2|KIF22|ENSG00000079616.8|kinesin family member 22
hg19_v2_chr12_+_113354341_113354422	0.600139	GLI2	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr16_+_71660079_71660102	0.592813	GLI2	ENST00000565261.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000268485.3|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000299952.4|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr12_-_48099773_48099844	0.592277	GLI2	ENST00000432584.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3 	ENST00000005386.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chr3_+_16926441_16926463	0.589923	GLI2	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr6_+_26273144_26273175	0.589836	GLI2	ENST00000377733.2|HIST1H2BI|ENSG00000168242.3|histone cluster 1, H2bi
hg19_v2_chr1_+_26869597_26869637	0.58592	GLI2	ENST00000530003.1|RPS6KA1|ENSG00000117676.9|ribosomal protein S6 kinase, 90kDa, polypeptide 1
hg19_v2_chrX_-_52546189_52546197	0.583064	GLI2	ENST00000375570.1|XAGE1E|ENSG00000204375.5|X antigen family, member 1E 	ENST00000429372.2|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr16_+_67063036_67063088	0.581973	GLI2	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr19_+_35820064_35820115	0.581366	GLI2	ENST00000341773.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600131.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000270311.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000595780.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000597916.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000593867.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600424.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000599811.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000536635.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000085219.5|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000544992.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000419549.2|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr5_-_88119580_88119605	0.580268	GLI2	ENST00000539796.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr9_+_131218698_131218750	0.578376	GLI2	ENST00000434106.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000546203.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000446274.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000421776.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000432065.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr3_-_25824925_25825042	0.570916	GLI2	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr19_-_33793430_33793470	0.570446	GLI2	ENST00000498907.2|CEBPA|ENSG00000245848.2|CCAAT/enhancer binding protein (C/EBP), alpha
hg19_v2_chr12_-_122712038_122712081	0.568981	GLI2	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr3_-_13009168_13009236	0.56624	GLI2	ENST00000273221.4|IQSEC1|ENSG00000144711.9|IQ motif and Sec7 domain 1
hg19_v2_chr16_+_67063142_67063153	0.560997	GLI2	ENST00000412916.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr12_-_125348329_125348419	0.560927	GLI2	ENST00000546215.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000415380.2|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000261693.6|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000376788.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000545493.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1
hg19_v2_chr2_-_172290482_172290596	0.552908	GLI2	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr21_-_33651324_33651380	0.548421	GLI2	ENST00000290130.3|MIS18A|ENSG00000159055.3|MIS18 kinetochore protein A
hg19_v2_chr9_-_98279241_98279339	0.547401	GLI2	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr14_-_91976488_91976661	0.527131	GLI2	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr9_-_33264557_33264668	0.526757	GLI2	ENST00000473781.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000488499.1|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr22_+_39410088_39410088	0.526323	GLI2	ENST00000361441.4|APOBEC3C|ENSG00000244509.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v2_chr16_+_2521500_2521514	0.521388	GLI2	ENST00000293973.1|NTN3|ENSG00000162068.1|netrin 3
hg19_v2_chr15_-_69113218_69113250	0.517676	GLI2	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr17_-_3867585_3867748	0.516438	GLI2	ENST00000359983.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000352011.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397043.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397041.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397035.3|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000397039.1|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous 	ENST00000309890.7|ATP2A3|ENSG00000074370.13|ATPase, Ca++ transporting, ubiquitous
hg19_v2_chr17_+_36861735_36861795	0.509279	GLI2	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr22_-_29138386_29138410	0.508725	GLI2	ENST00000544772.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr19_-_10464570_10464754	0.508505	GLI2	ENST00000529739.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr1_-_38273840_38273888	0.504181	GLI2	ENST00000373044.2|YRDC|ENSG00000196449.3|yrdC N(6)-threonylcarbamoyltransferase domain containing
hg19_v2_chr11_-_414948_415017	0.504067	GLI2	ENST00000530494.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528209.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000431843.2|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 	ENST00000528058.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr1_+_47799446_47799493	0.502211	GLI2	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr19_-_49314269_49314293	0.501781	GLI2	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chrX_+_52511761_52511769	0.500872	GLI2	ENST00000399795.3|XAGE1C|ENSG00000183461.12|X antigen family, member 1C 	ENST00000375589.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr2_+_220379052_220379131	0.500665	GLI2	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chr5_+_102455968_102456013	0.497826	GLI2	ENST00000358359.3|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr6_+_33172407_33172419	0.495134	GLI2	ENST00000374662.3|HSD17B8|ENSG00000204228.3|hydroxysteroid (17-beta) dehydrogenase 8
hg19_v2_chrX_-_52260355_52260363	0.487539	GLI2	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chrX_-_48056199_48056233	0.486862	GLI2	ENST00000311798.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5 	ENST00000347757.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5
hg19_v2_chr8_+_42010464_42010662	0.485054	GLI2	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr22_-_19419205_19419280	0.484076	GLI2	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr2_+_48010312_48010328	0.481101	GLI2	ENST00000540021.1|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr1_-_54411255_54411290	0.479678	GLI2	ENST00000371377.3|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr16_+_67062996_67063019	0.475264	GLI2	ENST00000561924.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr5_+_102455853_102455961	0.473061	GLI2	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr16_+_68119324_68119364	0.471323	GLI2	ENST00000349223.5|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr6_+_37400974_37401011	0.46943	GLI2	ENST00000455891.1|CMTR1|ENSG00000137200.8|cap methyltransferase 1 	ENST00000373451.4|CMTR1|ENSG00000137200.8|cap methyltransferase 1
hg19_v2_chr1_+_154966058_154966066	0.468131	GLI2	ENST00000392487.1|LENEP|ENSG00000163352.5|lens epithelial protein
hg19_v2_chr16_+_28996114_28996166	0.466754	GLI2	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr7_+_99971129_99971167	0.465446	GLI2	ENST00000394000.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000350573.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr8_-_90996837_90996944	0.459223	GLI2	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr6_-_53213587_53213772	0.458857	GLI2	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr1_-_38397384_38397429	0.458043	GLI2	ENST00000373027.1|INPP5B|ENSG00000204084.8|inositol polyphosphate-5-phosphatase, 75kDa
hg19_v2_chr19_+_47105309_47105329	0.452295	GLI2	ENST00000599839.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000596362.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr17_+_41158742_41158822	0.450596	GLI2	ENST00000415816.2|IFI35|ENSG00000068079.3|interferon-induced protein 35 	ENST00000438323.2|IFI35|ENSG00000068079.3|interferon-induced protein 35
hg19_v2_chr8_-_61880248_61880334	0.449829	GLI2	ENST00000525556.1|AC022182.3|ENSG00000254802.1|AC022182.3
hg19_v2_chr3_+_134514093_134514169	0.446129	GLI2	ENST00000398015.3|EPHB1|ENSG00000154928.12|EPH receptor B1
hg19_v2_chr11_+_64009072_64009220	0.445365	GLI2	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr2_+_128180842_128180878	0.442303	GLI2	ENST00000402125.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr19_-_913160_913240	0.44193	GLI2	ENST00000361574.5|R3HDM4|ENSG00000198858.5|R3H domain containing 4 	ENST00000587975.1|R3HDM4|ENSG00000198858.5|R3H domain containing 4
hg19_v2_chr19_-_49314169_49314194	0.436546	GLI2	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr19_+_56159362_56159405	0.435423	GLI2	ENST00000593069.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000308964.3|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106
hg19_v2_chr17_+_46184911_46184951	0.432791	GLI2	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr17_-_9929581_9929626	0.432378	GLI2	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chrX_+_48542168_48542241	0.431228	GLI2	ENST00000376701.4|WAS|ENSG00000015285.6|Wiskott-Aldrich syndrome
hg19_v2_chr12_+_112563335_112563371	0.427841	GLI2	ENST00000549358.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000257604.5|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000548092.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000552896.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1
hg19_v2_chr21_-_40720974_40720994	0.423869	GLI2	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr3_+_184081137_184081155	0.422394	GLI2	ENST00000443489.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr16_+_33204156_33204156	0.422115	GLI2	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr1_-_40042416_40042470	0.418178	GLI2	ENST00000372857.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000372856.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000531243.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000451091.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v2_chr21_+_45079409_45079452	0.413505	GLI2	ENST00000340648.4|RRP1B|ENSG00000160208.11|ribosomal RNA processing 1B
hg19_v2_chr19_+_41117770_41117817	0.409971	GLI2	ENST00000601032.1|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr19_+_7069690_7069726	0.406768	GLI2	ENST00000439035.2|ZNF557|ENSG00000130544.7|zinc finger protein 557
hg19_v2_chr3_-_197476560_197476577	0.405059	GLI2	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr8_+_74888417_74888485	0.402895	GLI2	ENST00000517439.1|TMEM70|ENSG00000175606.6|transmembrane protein 70 	ENST00000312184.5|TMEM70|ENSG00000175606.6|transmembrane protein 70
hg19_v2_chr9_-_33264676_33264761	0.40223	GLI2	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr12_+_6881678_6881707	0.402223	GLI2	ENST00000441671.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3 	ENST00000203629.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3
hg19_v2_chr3_+_160939050_160939116	0.400944	GLI2	ENST00000493066.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000351193.2|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000472947.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000463518.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor
hg19_v2_chr3_+_184081213_184081224	0.39477	GLI2	ENST00000429568.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr3_+_184081175_184081208	0.391458	GLI2	ENST00000452961.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H 	ENST00000296223.3|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chrX_+_24072833_24072907	0.390939	GLI2	ENST00000253039.4|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chrX_-_148669116_148669116	0.388713	GLI2	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chr14_+_100531615_100531705	0.387472	GLI2	ENST00000392920.3|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr1_+_150521876_150521901	0.385025	GLI2	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr17_+_26698677_26698732	0.38416	GLI2	ENST00000457710.3|SARM1|ENSG00000004139.9|sterile alpha and TIR motif containing 1
hg19_v2_chr4_+_108911036_108911065	0.382889	GLI2	ENST00000505878.1|HADH|ENSG00000138796.11|hydroxyacyl-CoA dehydrogenase
hg19_v2_chr2_+_48010221_48010307	0.382865	GLI2	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr20_-_62710832_62710879	0.382138	GLI2	ENST00000395042.1|RGS19|ENSG00000171700.9|regulator of G-protein signaling 19
hg19_v2_chr2_-_203776864_203776949	0.381846	GLI2	ENST00000261015.4|WDR12|ENSG00000138442.5|WD repeat domain 12
hg19_v2_chr19_+_56159509_56159643	0.374945	GLI2	ENST00000586790.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000591578.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106 	ENST00000588740.1|CCDC106|ENSG00000173581.3|coiled-coil domain containing 106
hg19_v2_chr9_+_140149625_140149674	0.374228	GLI2	ENST00000343053.4|NELFB|ENSG00000188986.4|negative elongation factor complex member B
hg19_v2_chr5_+_118407053_118407239	0.3718	GLI2	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr6_+_24495185_24495209	0.371466	GLI2	ENST00000348925.2|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr1_-_172413195_172413225	0.370326	GLI2	ENST00000344529.4|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr15_+_75315896_75315956	0.365101	GLI2	ENST00000342932.3|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000564923.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000569562.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000568649.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase
hg19_v2_chr4_+_107236692_107236709	0.364385	GLI2	ENST00000510207.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr15_-_49447835_49447858	0.361634	GLI2	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr19_-_23941639_23941672	0.36151	GLI2	ENST00000395385.3|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000531570.1|ZNF681|ENSG00000196172.8|zinc finger protein 681 	ENST00000528059.1|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr3_+_184080387_184080403	0.359411	GLI2	ENST00000455712.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr1_-_172413226_172413248	0.358016	GLI2	ENST00000367728.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C 	ENST00000258324.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chrX_+_70503433_70503517	0.357127	GLI2	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr15_+_40731920_40731964	0.356686	GLI2	ENST00000561234.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr18_-_268019_268064	0.35571	GLI2	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr22_+_22764088_22764105	0.355187	GLI2	ENST00000390299.2|IGLV1-40|ENSG00000211653.2|immunoglobulin lambda variable 1-40
hg19_v2_chr5_-_131826457_131826514	0.354457	GLI2	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr1_-_160549235_160549306	0.353976	GLI2	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr17_-_73149921_73149971	0.352495	GLI2	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr11_+_111957497_111957623	0.351239	GLI2	ENST00000375549.3|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528182.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528048.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528021.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000526592.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000525291.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein
hg19_v2_chr1_+_165796753_165796776	0.348611	GLI2	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr11_+_95523823_95523845	0.347784	GLI2	ENST00000538658.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr19_+_10381769_10381803	0.346684	GLI2	ENST00000423829.2|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1 	ENST00000588645.1|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1
hg19_v2_chr6_+_72596406_72596454	0.344736	GLI2	ENST00000491071.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr6_-_53213780_53213947	0.344057	GLI2	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr11_+_20409070_20409164	0.342753	GLI2	ENST00000331079.6|PRMT3|ENSG00000185238.8|protein arginine methyltransferase 3
hg19_v2_chr4_+_62067860_62067900	0.341311	GLI2	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr2_-_39348137_39348212	0.340184	GLI2	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr8_-_41655107_41655159	0.338612	GLI2	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr5_-_218251_218330	0.337703	GLI2	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr9_+_131219179_131219198	0.337404	GLI2	ENST00000372791.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr19_-_55791058_55791244	0.336694	GLI2	ENST00000587959.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585927.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587922.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585698.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chrX_+_148863584_148863612	0.333939	GLI2	ENST00000439010.2|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000298974.5|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000522429.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000519822.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9
hg19_v2_chr16_-_69368774_69368774	0.333147	GLI2	ENST00000562949.1|RP11-343C2.12|ENSG00000272617.1|Conserved oligomeric Golgi complex subunit 8
hg19_v2_chr19_-_42806444_42806500	0.332714	GLI2	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr19_+_36157715_36157715	0.33091	GLI2	ENST00000379013.2|UPK1A|ENSG00000105668.3|uroplakin 1A 	ENST00000222275.2|UPK1A|ENSG00000105668.3|uroplakin 1A
hg19_v2_chr19_-_55791431_55791508	0.329834	GLI2	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr5_+_161275320_161275450	0.329023	GLI2	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr12_+_112563303_112563317	0.327694	GLI2	ENST00000412615.2|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1
hg19_v2_chr17_-_73761222_73761317	0.326655	GLI2	ENST00000437911.1|GALK1|ENSG00000108479.7|galactokinase 1 	ENST00000225614.2|GALK1|ENSG00000108479.7|galactokinase 1
hg19_v2_chr10_+_14880157_14880176	0.326512	GLI2	ENST00000378372.3|HSPA14|ENSG00000187522.9|heat shock 70kDa protein 14
hg19_v2_chr19_-_55668093_55668174	0.32633	GLI2	ENST00000588882.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac) 	ENST00000586858.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac)
hg19_v2_chr2_-_96874553_96874572	0.326102	GLI2	ENST00000337288.5|STARD7|ENSG00000084090.9|StAR-related lipid transfer (START) domain containing 7 	ENST00000443962.1|STARD7|ENSG00000084090.9|StAR-related lipid transfer (START) domain containing 7
hg19_v2_chr17_-_79881408_79881423	0.325411	GLI2	ENST00000392366.3|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr16_-_3285144_3285191	0.324783	GLI2	ENST00000431561.3|ZNF200|ENSG00000010539.7|zinc finger protein 200 	ENST00000396870.4|ZNF200|ENSG00000010539.7|zinc finger protein 200
hg19_v2_chr12_-_2944184_2944209	0.324383	GLI2	ENST00000337508.4|NRIP2|ENSG00000053702.10|nuclear receptor interacting protein 2
hg19_v2_chr12_+_72148614_72148699	0.324139	GLI2	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr15_+_52311398_52311461	0.323612	GLI2	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr8_+_29953163_29953190	0.322027	GLI2	ENST00000518192.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr15_-_59225758_59225837	0.32119	GLI2	ENST00000558486.1|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator 	ENST00000560682.1|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator 	ENST00000249736.7|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator 	ENST00000559880.1|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator 	ENST00000536328.1|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr6_-_26027480_26027522	0.320563	GLI2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr5_+_154238042_154238091	0.319723	GLI2	ENST00000519211.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000522458.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519903.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521450.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000403027.2|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr3_-_56717246_56717324	0.318978	GLI2	ENST00000355628.5|FAM208A|ENSG00000163946.9|family with sequence similarity 208, member A
hg19_v2_chr7_-_91875358_91875480	0.318743	GLI2	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr3_-_49066811_49066851	0.317739	GLI2	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr11_+_95523621_95523710	0.316918	GLI2	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr22_-_21482352_21482352	0.313372	GLI2	ENST00000329949.3|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr15_-_78526855_78526916	0.313216	GLI2	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr6_+_26204825_26204858	0.310538	GLI2	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr10_+_127512106_127512130	0.309399	GLI2	ENST00000278100.6|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000299130.3|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000368759.5|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000429863.2|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein
hg19_v2_chr5_+_169931009_169931065	0.30745	GLI2	ENST00000328939.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1 	ENST00000390656.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr7_+_23145884_23145917	0.306846	GLI2	ENST00000409689.1|KLHL7|ENSG00000122550.13|kelch-like family member 7 	ENST00000410047.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr7_+_142985308_142985453	0.306385	GLI2	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr10_+_112327425_112327516	0.305781	GLI2	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr19_-_55791540_55791549	0.305137	GLI2	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr11_-_407103_407195	0.303505	GLI2	ENST00000526395.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr19_-_2051223_2051252	0.302404	GLI2	ENST00000309340.7|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589534.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000250896.3|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589509.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr14_+_72064945_72064952	0.299697	GLI2	ENST00000537413.1|SIPA1L1|ENSG00000197555.5|signal-induced proliferation-associated 1 like 1
hg19_v2_chr10_-_43904235_43904330	0.298626	GLI2	ENST00000356053.3|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr11_+_34938119_34938204	0.298606	GLI2	ENST00000227868.4|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000430469.2|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000533262.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr16_+_22308717_22308764	0.296833	GLI2	ENST00000299853.5|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564209.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000565358.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000418581.2|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564883.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000359210.4|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000563024.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD)
hg19_v2_chr22_-_26961328_26961339	0.296676	GLI2	ENST00000398110.2|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2
hg19_v2_chr13_+_20532807_20532841	0.296228	GLI2	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr10_-_101989315_101989376	0.293463	GLI2	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr14_-_74417096_74417117	0.293176	GLI2	ENST00000286544.3|FAM161B|ENSG00000156050.4|family with sequence similarity 161, member B
hg19_v2_chr16_-_74700737_74700804	0.29262	GLI2	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr11_-_65430251_65430399	0.291544	GLI2	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr9_-_98269481_98269691	0.291526	GLI2	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr10_-_94333784_94333860	0.291236	GLI2	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr16_+_1730338_1730369	0.291072	GLI2	ENST00000566691.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382710.4|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr22_+_39410287_39410368	0.29029	GLI2	ENST00000381568.4|APOBEC3D|ENSG00000243811.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
hg19_v2_chr1_-_155947951_155947974	0.286761	GLI2	ENST00000313695.7|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2 	ENST00000497907.1|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr22_+_39760130_39760175	0.285194	GLI2	ENST00000381535.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr14_-_24615523_24615569	0.285138	GLI2	ENST00000559056.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr4_+_6784401_6784510	0.283472	GLI2	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr14_-_91976794_91976871	0.282339	GLI2	ENST00000555462.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr19_-_51875894_51875975	0.281605	GLI2	ENST00000600427.1|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence 	ENST00000595217.1|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence 	ENST00000221978.5|NKG7|ENSG00000105374.5|natural killer cell group 7 sequence
hg19_v2_chr2_+_172290707_172290764	0.28064	GLI2	ENST00000375255.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17 	ENST00000539783.1|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr19_+_34663397_34663473	0.278555	GLI2	ENST00000540746.2|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000544216.3|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae) 	ENST00000433627.5|LSM14A|ENSG00000257103.4|LSM14A, SCD6 homolog A (S. cerevisiae)
hg19_v2_chrX_+_19373700_19373845	0.278111	GLI2	ENST00000379804.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr9_+_4490394_4490446	0.277485	GLI2	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr18_+_268148_268188	0.277146	GLI2	ENST00000581677.1|RP11-705O1.8|ENSG00000263884.1|RP11-705O1.8
hg19_v2_chr16_+_30075783_30075818	0.276947	GLI2	ENST00000412304.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr9_+_70971815_70971841	0.276688	GLI2	ENST00000396392.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5 	ENST00000396396.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5
hg19_v2_chr17_-_61920280_61920425	0.275404	GLI2	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg19_v2_chr11_-_128392085_128392232	0.274461	GLI2	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr5_-_150284532_150284549	0.273327	GLI2	ENST00000394226.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000446148.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000274599.5|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000418587.2|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr17_+_26989109_26989248	0.271362	GLI2	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr17_+_7155819_7155942	0.270058	GLI2	ENST00000570322.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000576496.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000574841.2|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5
hg19_v2_chr19_-_42806919_42806958	0.268984	GLI2	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr11_+_18230727_18230755	0.268745	GLI2	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr6_+_72596604_72596727	0.268552	GLI2	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr10_-_99258135_99258195	0.268144	GLI2	ENST00000327238.10|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000327277.7|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000355839.6|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000437002.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000422685.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae)
hg19_v2_chr10_-_75410771_75410813	0.268068	GLI2	ENST00000372873.4|SYNPO2L|ENSG00000166317.7|synaptopodin 2-like
hg19_v2_chr20_-_50808290_50808328	0.267873	GLI2	ENST00000346617.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein 	ENST00000371515.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein 	ENST00000371518.2|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chrX_+_129040122_129040174	0.267623	GLI2	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr10_+_94451574_94451612	0.267399	GLI2	ENST00000492654.2|HHEX|ENSG00000152804.6|hematopoietically expressed homeobox
hg19_v2_chr8_+_27183033_27183088	0.266679	GLI2	ENST00000420218.2|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr15_-_34875771_34875894	0.266105	GLI2	ENST00000267731.7|GOLGA8B|ENSG00000215252.7|golgin A8 family, member B
hg19_v2_chr1_+_207494853_207495136	0.266072	GLI2	ENST00000367064.3|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000367063.2|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000391921.4|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000367067.4|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000314754.8|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000367065.5|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000391920.4|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000367062.4|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group) 	ENST00000343420.6|CD55|ENSG00000196352.9|CD55 molecule, decay accelerating factor for complement (Cromer blood group)
hg19_v2_chr3_-_107809816_107809885	0.265876	GLI2	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr7_-_135433460_135433499	0.264211	GLI2	ENST00000415751.1|FAM180A|ENSG00000189320.4|family with sequence similarity 180, member A
hg19_v2_chr12_-_53715328_53715415	0.263968	GLI2	ENST00000547757.1|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000394384.3|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000209873.4|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia
hg19_v2_chr4_+_158142750_158142836	0.263516	GLI2	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr8_-_124408652_124408712	0.260968	GLI2	ENST00000287394.5|ATAD2|ENSG00000156802.8|ATPase family, AAA domain containing 2
hg19_v2_chr1_+_244998602_244998646	0.259038	GLI2	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr7_+_99971068_99971128	0.255932	GLI2	ENST00000198536.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000453419.1|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr14_-_24615805_24615834	0.255453	GLI2	ENST00000560410.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr8_+_146052849_146053003	0.254969	GLI2	ENST00000532777.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325241.6|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000446747.2|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000525266.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000544249.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325217.5|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000533314.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000527218.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000529819.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000528372.1|ZNF7|ENSG00000147789.11|zinc finger protein 7
hg19_v2_chr1_-_38471156_38471194	0.252609	GLI2	ENST00000373016.3|FHL3|ENSG00000183386.5|four and a half LIM domains 3
hg19_v2_chr1_+_202431859_202431871	0.250922	GLI2	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr5_-_150284351_150284443	0.249372	GLI2	ENST00000427179.1|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr1_-_157108266_157108347	0.248871	GLI2	ENST00000326786.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr14_-_68066975_68067027	0.24877	GLI2	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr1_-_26232951_26232959	0.247675	GLI2	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr12_-_122985067_122985268	0.246743	GLI2	ENST00000540586.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8 	ENST00000543897.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr12_-_82152444_82152475	0.246528	GLI2	ENST00000549325.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000550584.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr22_+_41956767_41956852	0.245041	GLI2	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr4_-_7069760_7069924	0.243438	GLI2	ENST00000264954.4|GRPEL1|ENSG00000109519.8|GrpE-like 1, mitochondrial (E. coli)
hg19_v2_chr19_+_859425_859481	0.241684	GLI2	ENST00000327726.6|CFD|ENSG00000197766.3|complement factor D (adipsin)
hg19_v2_chr19_+_17858547_17858582	0.239813	GLI2	ENST00000600676.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000600209.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596309.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598539.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000597474.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593385.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598067.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593833.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr9_+_117092149_117092152	0.239606	GLI2	ENST00000431067.2|ORM2|ENSG00000228278.2|orosomucoid 2 	ENST00000412657.1|ORM2|ENSG00000228278.2|orosomucoid 2
hg19_v2_chr14_+_74353320_74353469	0.23815	GLI2	ENST00000540593.1|ZNF410|ENSG00000119725.13|zinc finger protein 410 	ENST00000555730.1|ZNF410|ENSG00000119725.13|zinc finger protein 410
hg19_v2_chr7_+_87257701_87257770	0.238124	GLI2	ENST00000338056.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B 	ENST00000493037.1|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr21_-_38445011_38445200	0.238121	GLI2	ENST00000464265.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399102.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr19_-_48673552_48673578	0.237365	GLI2	ENST00000536218.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent 	ENST00000596549.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent
hg19_v2_chr16_+_15744078_15744133	0.236064	GLI2	ENST00000396354.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1 	ENST00000570727.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1
hg19_v2_chr19_-_6424783_6424805	0.235533	GLI2	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr4_-_77069533_77069563	0.234209	GLI2	ENST00000514987.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000458189.2|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000514901.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000342467.6|NUP54|ENSG00000138750.10|nucleoporin 54kDa
hg19_v2_chr19_+_782755_782833	0.234187	GLI2	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr1_-_16344500_16344568	0.228358	GLI2	ENST00000406363.2|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000411503.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000545268.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000487046.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular)
hg19_v2_chr12_+_101673872_101673912	0.226956	GLI2	ENST00000261637.4|UTP20|ENSG00000120800.4|UTP20, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr11_-_3400442_3400453	0.226627	GLI2	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr19_-_42806723_42806795	0.226571	GLI2	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr17_-_26684473_26684571	0.224299	GLI2	ENST00000540200.1|POLDIP2|ENSG00000004142.7|polymerase (DNA-directed), delta interacting protein 2
hg19_v2_chr4_+_76649797_76650004	0.224206	GLI2	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr5_+_154238096_154238119	0.223801	GLI2	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr2_-_183387283_183387304	0.223494	GLI2	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr16_-_11681023_11681145	0.222835	GLI2	ENST00000570904.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000574701.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr8_+_28351707_28351781	0.222608	GLI2	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr19_-_19754354_19754370	0.22243	GLI2	ENST00000587238.1|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr10_+_105156364_105156448	0.221828	GLI2	ENST00000369797.3|PDCD11|ENSG00000148843.9|programmed cell death 11
hg19_v2_chr17_-_42298201_42298284	0.221004	GLI2	ENST00000527034.1|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr2_-_241759622_241759725	0.217065	GLI2	ENST00000320389.7|KIF1A|ENSG00000130294.10|kinesin family member 1A 	ENST00000498729.2|KIF1A|ENSG00000130294.10|kinesin family member 1A
hg19_v2_chr14_+_29236269_29236287	0.215333	GLI2	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr16_+_28565230_28565257	0.215062	GLI2	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr17_+_31255165_31255228	0.21448	GLI2	ENST00000578289.1|TMEM98|ENSG00000006042.7|transmembrane protein 98 	ENST00000439138.1|TMEM98|ENSG00000006042.7|transmembrane protein 98
hg19_v2_chr5_+_149877334_149877354	0.212994	GLI2	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr3_-_197300194_197300219	0.212538	GLI2	ENST00000358186.2|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000431056.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1
hg19_v2_chr18_+_59992514_59992525	0.211105	GLI2	ENST00000269485.7|TNFRSF11A|ENSG00000141655.11|tumor necrosis factor receptor superfamily, member 11a, NFKB activator
hg19_v2_chr17_-_7018128_7018150	0.210568	GLI2	ENST00000380952.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2 	ENST00000254850.7|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr20_-_50722183_50722217	0.210518	GLI2	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr7_-_44180673_44180687	0.20917	GLI2	ENST00000457314.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000447951.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000431007.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr4_-_71705027_71705051	0.208622	GLI2	ENST00000545193.1|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr21_-_40720995_40721126	0.208466	GLI2	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr11_+_107879459_107879702	0.208249	GLI2	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr19_+_4969116_4969143	0.207832	GLI2	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr2_-_70475701_70475717	0.20697	GLI2	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr2_-_225434538_225434545	0.206497	GLI2	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr3_-_3221358_3221394	0.204329	GLI2	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr3_+_179280668_179280769	0.203811	GLI2	ENST00000429709.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000450518.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000392662.1|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000490364.1|ACTL6A|ENSG00000136518.12|actin-like 6A
hg19_v2_chr12_-_57400227_57400245	0.203717	GLI2	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr11_+_34460447_34460561	0.198946	GLI2	ENST00000241052.4|CAT|ENSG00000121691.4|catalase
hg19_v2_chr4_+_72053017_72053044	0.198885	GLI2	ENST00000351898.6|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr17_-_7017968_7018021	0.198717	GLI2	ENST00000355035.5|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr6_-_27841289_27841318	0.19653	GLI2	ENST00000355981.2|HIST1H4L|ENSG00000198558.2|histone cluster 1, H4l
hg19_v2_chr12_-_82152420_82152441	0.196393	GLI2	ENST00000552948.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000548586.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr4_+_81951957_81952119	0.196193	GLI2	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr6_-_168479839_168479904	0.195803	GLI2	ENST00000283309.6|FRMD1|ENSG00000153303.12|FERM domain containing 1
hg19_v2_chr14_+_24584508_24584583	0.195643	GLI2	ENST00000559354.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000560459.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000559593.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396941.4|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11 	ENST00000396936.1|DCAF11|ENSG00000100897.13|DDB1 and CUL4 associated factor 11
hg19_v2_chr5_+_7869217_7869352	0.195482	GLI2	ENST00000264668.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000514220.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000341013.6|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000440940.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000502550.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000506877.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase
hg19_v2_chr11_-_113345995_113346016	0.193364	GLI2	ENST00000355319.2|DRD2|ENSG00000149295.9|dopamine receptor D2 	ENST00000542616.1|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chrX_-_2418936_2419024	0.192197	GLI2	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr2_-_201936302_201936416	0.190865	GLI2	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr5_+_70196492_70196601	0.190451	GLI2	ENST00000317633.9|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000511162.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000354833.3|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000513436.2|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000504458.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric)
hg19_v2_chr19_+_58962971_58963014	0.189995	GLI2	ENST00000336614.4|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000545523.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599194.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000598244.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599193.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000594214.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000391696.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B
hg19_v2_chr9_+_117085336_117085377	0.189342	GLI2	ENST00000259396.8|ORM1|ENSG00000229314.4|orosomucoid 1 	ENST00000538816.1|ORM1|ENSG00000229314.4|orosomucoid 1
hg19_v2_chr11_-_64646086_64646191	0.188669	GLI2	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr9_+_87285257_87285311	0.188462	GLI2	ENST00000323115.4|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr12_-_82153087_82153138	0.18634	GLI2	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chrX_+_49091920_49091942	0.184905	GLI2	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr9_+_132427883_132427951	0.18483	GLI2	ENST00000372469.4|PRRX2|ENSG00000167157.9|paired related homeobox 2
hg19_v2_chr17_-_41116454_41116515	0.184197	GLI2	ENST00000427569.2|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1 	ENST00000430739.1|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1
hg19_v2_chr19_-_19754404_19754478	0.182645	GLI2	ENST00000587205.1|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000445806.2|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000203556.4|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr11_-_77122928_77123045	0.181874	GLI2	ENST00000528203.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000528592.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000528633.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000529248.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v2_chr18_+_72201829_72201845	0.180281	GLI2	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr10_-_102989551_102989551	0.180229	GLI2	ENST00000370193.2|LBX1|ENSG00000138136.5|ladybird homeobox 1
hg19_v2_chr1_+_26737292_26737322	0.180158	GLI2	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr12_+_53689309_53689366	0.17962	GLI2	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr18_+_59992527_59992555	0.179325	GLI2	ENST00000586569.1|TNFRSF11A|ENSG00000141655.11|tumor necrosis factor receptor superfamily, member 11a, NFKB activator
hg19_v2_chr11_+_18230685_18230720	0.179015	GLI2	ENST00000340135.3|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141  	ENST00000534640.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr4_+_57843876_57843937	0.178049	GLI2	ENST00000450656.1|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000381227.1|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chr19_-_10491234_10491352	0.177981	GLI2	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr19_-_55791563_55791749	0.177135	GLI2	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_+_10479906_10479925	0.176581	GLI2	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr2_-_74710078_74710142	0.176574	GLI2	ENST00000290418.4|CCDC142|ENSG00000135637.9|coiled-coil domain containing 142
hg19_v2_chr3_-_195538728_195538754	0.175793	GLI2	ENST00000349607.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated 	ENST00000346145.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr20_+_33814457_33814506	0.174988	GLI2	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr14_+_79746249_79746291	0.174884	GLI2	ENST00000428277.2|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr2_+_241564655_241564668	0.174742	GLI2	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr1_+_220267429_220267510	0.174642	GLI2	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr1_-_45805607_45805655	0.174336	GLI2	ENST00000372104.1|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000448481.1|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000483127.1|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000528013.2|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000456914.2|MUTYH|ENSG00000132781.13|mutY homolog
hg19_v2_chr12_-_56101647_56101699	0.174267	GLI2	ENST00000347027.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257879.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257880.7|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394230.2|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394229.2|ITGA7|ENSG00000135424.11|integrin, alpha 7
hg19_v2_chr2_+_32502952_32503025	0.173029	GLI2	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr18_-_60986962_60987019	0.170724	GLI2	ENST00000333681.4|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr20_-_18447667_18447829	0.17005	GLI2	ENST00000262547.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000329494.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000357236.4|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1
hg19_v2_chr12_-_109125285_109125372	0.16993	GLI2	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr2_+_219283815_219283853	0.169733	GLI2	ENST00000248444.5|VIL1|ENSG00000127831.6|villin 1 	ENST00000454069.1|VIL1|ENSG00000127831.6|villin 1 	ENST00000392114.2|VIL1|ENSG00000127831.6|villin 1
hg19_v2_chr19_+_50180409_50180501	0.16959	GLI2	ENST00000391851.4|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr22_-_30867973_30868036	0.167875	GLI2	ENST00000402286.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000401751.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000539629.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000403066.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000215812.4|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr4_-_168155417_168155483	0.165551	GLI2	ENST00000511269.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000506697.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512042.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr20_+_3190006_3190178	0.164766	GLI2	ENST00000380113.3|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 	ENST00000455664.2|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase) 	ENST00000399838.3|ITPA|ENSG00000125877.8|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
hg19_v2_chr1_-_40105617_40105617	0.162959	GLI2	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr11_+_16760161_16760231	0.162538	GLI2	ENST00000524439.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000422258.2|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000528634.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000525684.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58
hg19_v2_chr11_-_74109422_74109518	0.161512	GLI2	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr1_-_85040090_85040168	0.161169	GLI2	ENST00000370630.5|CTBS|ENSG00000117151.8|chitobiase, di-N-acetyl-
hg19_v2_chr5_+_76506706_76506787	0.1607	GLI2	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr8_+_29952914_29953016	0.160419	GLI2	ENST00000321250.8|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000518001.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000520682.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000442880.2|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000523116.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr19_+_13056663_13056706	0.16017	GLI2	ENST00000541222.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000316856.3|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000586534.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae) 	ENST00000592268.1|RAD23A|ENSG00000179262.5|RAD23 homolog A (S. cerevisiae)
hg19_v2_chr15_-_75165651_75165714	0.159521	GLI2	ENST00000562363.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000564529.1|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2 	ENST00000268099.9|SCAMP2|ENSG00000140497.12|secretory carrier membrane protein 2
hg19_v2_chr2_+_241544834_241544862	0.159042	GLI2	ENST00000319838.5|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000403859.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000438013.2|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr19_+_17858509_17858529	0.158654	GLI2	ENST00000594202.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000252771.7|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000389133.4|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr21_-_38445297_38445313	0.158406	GLI2	ENST00000430792.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399103.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr9_+_131709966_131710000	0.158193	GLI2	ENST00000372577.2|NUP188|ENSG00000095319.10|nucleoporin 188kDa
hg19_v2_chr2_-_70475730_70475798	0.158147	GLI2	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr4_+_107236722_107236767	0.156763	GLI2	ENST00000442366.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr4_+_107236847_107236876	0.156733	GLI2	ENST00000358008.3|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr2_-_85895295_85895331	0.156724	GLI2	ENST00000428225.1|SFTPB|ENSG00000168878.12|surfactant protein B 	ENST00000519937.2|SFTPB|ENSG00000168878.12|surfactant protein B
hg19_v2_chr11_+_65819802_65819871	0.156585	GLI2	ENST00000528302.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000322535.6|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000524627.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000533595.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000530322.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa
hg19_v2_chr15_-_49447771_49447822	0.156515	GLI2	ENST00000558843.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000542928.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000561248.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr8_-_29120580_29120596	0.155127	GLI2	ENST00000524189.1|KIF13B|ENSG00000197892.8|kinesin family member 13B
hg19_v2_chr17_-_7017559_7017630	0.154585	GLI2	ENST00000446679.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr17_-_26876350_26876417	0.153368	GLI2	ENST00000470125.1|UNC119|ENSG00000109103.7|unc-119 homolog (C. elegans)
hg19_v2_chr21_-_33984865_33984883	0.152909	GLI2	ENST00000458138.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr16_+_55690002_55690023	0.151525	GLI2	ENST00000414754.3|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr16_+_2083265_2083303	0.151438	GLI2	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr12_-_13248598_13248630	0.15095	GLI2	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr5_+_82373379_82373444	0.150183	GLI2	ENST00000396027.4|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000511817.1|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr19_+_58125580_58125639	0.149889	GLI2	ENST00000600344.1|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000396161.5|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000600883.1|ZNF134|ENSG00000213762.6|zinc finger protein 134
hg19_v2_chr5_-_58571935_58571951	0.149776	GLI2	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr3_-_38178527_38178632	0.149723	GLI2	ENST00000544624.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000444607.2|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000450296.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1
hg19_v2_chr16_+_30075595_30075636	0.149325	GLI2	ENST00000563060.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr14_+_23776167_23776189	0.148973	GLI2	ENST00000554635.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557008.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough
hg19_v2_chr1_+_28696111_28696130	0.148862	GLI2	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chr9_+_88556036_88556101	0.148402	GLI2	ENST00000361671.5|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENST00000416045.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr1_+_26737253_26737269	0.14828	GLI2	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr17_-_27224621_27224759	0.147471	GLI2	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr11_+_73003824_73003859	0.14658	GLI2	ENST00000538328.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr19_-_7939319_7939358	0.146118	GLI2	ENST00000539422.1|CTD-3193O13.9|ENSG00000183248.7|Protein FLJ22184
hg19_v2_chr4_+_1795508_1795623	0.14576	GLI2	ENST00000260795.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000352904.1|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3
hg19_v2_chr1_-_21606013_21606059	0.144869	GLI2	ENST00000357071.4|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr17_+_7184986_7185076	0.143864	GLI2	ENST00000317370.8|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4 	ENST00000571308.1|SLC2A4|ENSG00000181856.10|solute carrier family 2 (facilitated glucose transporter), member 4
hg19_v2_chr14_-_106068065_106068065	0.143574	GLI2	ENST00000390541.2|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr21_-_33984456_33984726	0.143229	GLI2	ENST00000431216.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000553001.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000440966.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr11_+_14665373_14665380	0.142737	GLI2	ENST00000455098.2|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr6_+_35227449_35227551	0.142475	GLI2	ENST00000373953.3|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000440666.2|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000339411.5|ZNF76|ENSG00000065029.10|zinc finger protein 76
hg19_v2_chr22_-_51016433_51016451	0.142461	GLI2	ENST00000405237.3|CPT1B|ENSG00000205560.8|carnitine palmitoyltransferase 1B (muscle)
hg19_v2_chr12_+_69202975_69203013	0.1423	GLI2	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr13_+_113760098_113760121	0.142036	GLI2	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr17_+_18996287_18996287	0.141634	GLI2	ENST00000399091.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000443876.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000428928.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042
hg19_v2_chr17_+_80009741_80009834	0.141098	GLI2	ENST00000578552.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000320548.4|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581578.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583885.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583641.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581418.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000355130.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000306823.6|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000392358.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr16_-_23724518_23724568	0.13875	GLI2	ENST00000457008.2|ERN2|ENSG00000134398.8|endoplasmic reticulum to nucleus signaling 2
hg19_v2_chr3_+_23958632_23958651	0.137894	GLI2	ENST00000412097.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000415719.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000435882.1|RPL15|ENSG00000174748.14|ribosomal protein L15
hg19_v2_chr7_-_55606346_55606366	0.137609	GLI2	ENST00000545390.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr3_-_195538760_195538775	0.137175	GLI2	ENST00000475231.1|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr2_+_48541776_48541874	0.136196	GLI2	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr7_+_87257854_87257931	0.135463	GLI2	ENST00000394654.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr11_+_31531291_31531345	0.135356	GLI2	ENST00000350638.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000379163.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000395934.2|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4
hg19_v2_chr20_+_35202909_35203075	0.134942	GLI2	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr22_-_46373004_46373016	0.134896	GLI2	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr17_-_3461092_3461126	0.132842	GLI2	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr2_+_73144604_73144654	0.132662	GLI2	ENST00000258106.6|EMX1|ENSG00000135638.9|empty spiracles homeobox 1
hg19_v2_chr11_-_19262486_19262512	0.132059	GLI2	ENST00000250024.4|E2F8|ENSG00000129173.8|E2F transcription factor 8
hg19_v2_chr22_-_46450024_46450110	0.131836	GLI2	ENST00000396008.2|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26 	ENST00000333761.1|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26
hg19_v2_chr5_+_140019004_140019068	0.131329	GLI2	ENST00000394671.3|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000511410.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6 	ENST00000537378.1|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6
hg19_v2_chr11_-_113346111_113346125	0.130632	GLI2	ENST00000362072.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr21_-_38445470_38445491	0.130537	GLI2	ENST00000399098.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr7_+_6617039_6617136	0.129711	GLI2	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chr17_+_5389605_5389719	0.129493	GLI2	ENST00000576988.1|MIS12|ENSG00000167842.11|MIS12 kinetochore complex component 	ENST00000576570.1|MIS12|ENSG00000167842.11|MIS12 kinetochore complex component 	ENST00000573759.1|MIS12|ENSG00000167842.11|MIS12 kinetochore complex component
hg19_v2_chr19_+_708910_708975	0.129325	GLI2	ENST00000264560.7|PALM|ENSG00000099864.13|paralemmin
hg19_v2_chr5_+_82373317_82373375	0.12904	GLI2	ENST00000282268.3|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000338635.6|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr6_+_147091575_147091715	0.127523	GLI2	ENST00000326916.8|ADGB|ENSG00000118492.12|androglobin 	ENST00000470716.2|ADGB|ENSG00000118492.12|androglobin 	ENST00000367488.1|ADGB|ENSG00000118492.12|androglobin
hg19_v2_chr19_+_10131437_10131437	0.127048	GLI2	ENST00000587782.1|RDH8|ENSG00000080511.2|retinol dehydrogenase 8 (all-trans)
hg19_v2_chr7_-_6098770_6098861	0.126944	GLI2	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr10_-_35379241_35379294	0.126744	GLI2	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr16_-_89883015_89883088	0.126049	GLI2	ENST00000563673.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389301.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000568369.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000534992.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389302.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000543736.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A
hg19_v2_chr6_+_158402860_158403070	0.125997	GLI2	ENST00000367122.2|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367121.3|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000355585.4|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367113.4|SYNJ2|ENSG00000078269.9|synaptojanin 2
hg19_v2_chr15_+_31658349_31658358	0.125807	GLI2	ENST00000558844.1|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr2_-_172750733_172750762	0.123825	GLI2	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr16_+_1306093_1306134	0.123105	GLI2	ENST00000211076.3|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr1_-_19811132_19811158	0.122481	GLI2	ENST00000433834.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr5_+_154237778_154237822	0.121941	GLI2	ENST00000523698.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000517876.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520472.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr5_-_179050066_179050170	0.12194	GLI2	ENST00000329433.6|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510411.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr2_-_183387064_183387129	0.121834	GLI2	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr8_-_133493200_133493352	0.121651	GLI2	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr19_+_58790314_58790358	0.121398	GLI2	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr11_+_76777979_76778027	0.120849	GLI2	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr12_-_13248732_13248744	0.12018	GLI2	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr2_+_128175997_128176020	0.120173	GLI2	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr1_+_203097407_203097476	0.119761	GLI2	ENST00000367235.1|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr11_+_113258495_113258513	0.119582	GLI2	ENST00000303941.3|ANKK1|ENSG00000170209.4|ankyrin repeat and kinase domain containing 1
hg19_v2_chr1_+_1950763_1950815	0.118562	GLI2	ENST00000378585.4|GABRD|ENSG00000187730.6|gamma-aminobutyric acid (GABA) A receptor, delta
hg19_v2_chr1_-_112531777_112531801	0.118361	GLI2	ENST00000315987.2|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3 	ENST00000302127.4|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3
hg19_v2_chr17_+_7487146_7487211	0.118278	GLI2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr19_+_50180507_50180551	0.11821	GLI2	ENST00000454376.2|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1 	ENST00000524771.1|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr1_+_153600869_153600940	0.118145	GLI2	ENST00000292169.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000368696.3|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000436839.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1
hg19_v2_chr1_-_200379129_200379174	0.116787	GLI2	ENST00000367353.1|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr13_+_20532900_20532923	0.116469	GLI2	ENST00000382871.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr16_-_18801582_18801630	0.115418	GLI2	ENST00000565420.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr21_-_33984888_33984903	0.115367	GLI2	ENST00000382549.4|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59 	ENST00000540881.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr1_-_10856694_10856715	0.115019	GLI2	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr19_+_17186577_17186637	0.114804	GLI2	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr3_-_38071122_38071253	0.114712	GLI2	ENST00000334661.4|PLCD1|ENSG00000187091.9|phospholipase C, delta 1
hg19_v2_chr12_-_13248705_13248710	0.11386	GLI2	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr14_+_64932210_64932226	0.111939	GLI2	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr5_-_102455801_102455855	0.111368	GLI2	ENST00000508629.1|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1 	ENST00000399004.2|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1
hg19_v2_chr14_+_105886150_105886229	0.111041	GLI2	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr19_-_10613421_10613572	0.110096	GLI2	ENST00000393623.2|KEAP1|ENSG00000079999.9|kelch-like ECH-associated protein 1
hg19_v2_chr19_-_49520338_49520367	0.108351	GLI2	ENST00000221421.2|LHB|ENSG00000104826.7|luteinizing hormone beta polypeptide
hg19_v2_chr12_-_13248562_13248596	0.108201	GLI2	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr17_-_7137582_7137637	0.105386	GLI2	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr2_+_74710194_74710217	0.105219	GLI2	ENST00000410003.1|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31 	ENST00000442235.2|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31 	ENST00000233623.5|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31
hg19_v2_chr14_-_94759595_94759613	0.105084	GLI2	ENST00000261994.4|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chrX_+_153448107_153448107	0.10495	GLI2	ENST00000369935.5|OPN1MW|ENSG00000147380.6|opsin 1 (cone pigments), medium-wave-sensitive
hg19_v2_chr19_-_48823332_48823332	0.104911	GLI2	ENST00000315396.7|CCDC114|ENSG00000105479.11|coiled-coil domain containing 114
hg19_v2_chr14_+_24605389_24605446	0.104822	GLI2	ENST00000382708.3|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000561435.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr19_+_45445524_45445537	0.104813	GLI2	ENST00000591600.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV
hg19_v2_chr19_+_10982189_10982272	0.104677	GLI2	ENST00000327064.4|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1 	ENST00000588947.1|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1
hg19_v2_chr15_+_27112948_27113033	0.104519	GLI2	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr8_+_7705398_7705621	0.103366	GLI2	ENST00000400125.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000434307.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000326558.5|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000351436.4|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000528033.1|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A
hg19_v2_chr4_-_5894777_5894799	0.10313	GLI2	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr12_+_51633061_51633095	0.103032	GLI2	ENST00000551313.1|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr1_-_200379104_200379128	0.102958	GLI2	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr1_+_41174988_41175047	0.102335	GLI2	ENST00000372652.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr17_+_42219383_42219424	0.102184	GLI2	ENST00000245382.6|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr1_+_156756667_156756721	0.102128	GLI2	ENST00000526188.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated) 	ENST00000454659.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated)
hg19_v2_chr15_-_75918109_75918156	0.101648	GLI2	ENST00000567134.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000308588.5|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr15_-_75918023_75918090	0.101455	GLI2	ENST00000564644.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000371091.5|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000564675.1|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr17_+_29158962_29159046	0.100955	GLI2	ENST00000321990.4|ATAD5|ENSG00000176208.4|ATPase family, AAA domain containing 5
hg19_v2_chr17_+_79935418_79935431	0.100297	GLI2	ENST00000306729.7|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1 	ENST00000306739.4|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr17_-_79827808_79827882	0.0984509	GLI2	ENST00000580685.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr17_+_42219267_42219329	0.0983629	GLI2	ENST00000319977.4|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53 	ENST00000585683.1|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr4_+_83351791_83351802	0.0972743	GLI2	ENST00000509635.1|ENOPH1|ENSG00000145293.10|enolase-phosphatase 1
hg19_v2_chr5_-_156569754_156569786	0.0970176	GLI2	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr1_-_152386732_152386745	0.0959629	GLI2	ENST00000271835.3|CRNN|ENSG00000143536.7|cornulin
hg19_v2_chr4_+_107237660_107237685	0.0956128	GLI2	ENST00000394701.4|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr14_+_75761099_75761114	0.0948105	GLI2	ENST00000561000.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5	ENST00000558575.1|RP11-293M10.5|ENSG00000259687.1|RP11-293M10.5
hg19_v2_chr5_+_161494770_161494787	0.0946779	GLI2	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr12_+_57853918_57853934	0.0946285	GLI2	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr16_+_89686991_89687015	0.093679	GLI2	ENST00000393092.3|DPEP1|ENSG00000015413.5|dipeptidase 1 (renal)
hg19_v2_chr16_-_71843047_71843104	0.0932835	GLI2	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr17_+_30677136_30677205	0.0926858	GLI2	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr13_+_20532848_20532890	0.0926781	GLI2	ENST00000382874.2|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr1_+_35225339_35225343	0.0925338	GLI2	ENST00000339480.1|GJB4|ENSG00000189433.5|gap junction protein, beta 4, 30.3kDa
hg19_v2_chr14_+_24605361_24605381	0.0914896	GLI2	ENST00000206451.6|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000559123.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr16_+_30064444_30064528	0.091197	GLI2	ENST00000395248.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000566897.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000568435.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr6_-_160210715_160210781	0.0900544	GLI2	ENST00000392168.2|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000321394.7|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chr16_+_1306060_1306088	0.0891854	GLI2	ENST00000397534.2|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr2_+_201936458_201936467	0.0880204	GLI2	ENST00000237889.4|NDUFB3|ENSG00000119013.4|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
hg19_v2_chr5_+_140019079_140019105	0.0880034	GLI2	ENST00000252100.6|TMCO6|ENSG00000113119.8|transmembrane and coiled-coil domains 6
hg19_v2_chr11_+_76778033_76778047	0.0871287	GLI2	ENST00000456580.2|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr20_+_49348081_49348096	0.0868128	GLI2	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chrX_-_152989531_152989568	0.0860834	GLI2	ENST00000458587.2|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000416815.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr13_-_30169807_30169839	0.085582	GLI2	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr6_+_27925019_27925019	0.0852648	GLI2	ENST00000244623.1|OR2B6|ENSG00000124657.1|olfactory receptor, family 2, subfamily B, member 6
hg19_v2_chrX_+_115567767_115567790	0.0850416	GLI2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr11_-_77123065_77123109	0.0844075	GLI2	ENST00000530617.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v2_chr11_-_67407031_67407031	0.0833562	GLI2	ENST00000335385.3|TBX10|ENSG00000167800.9|T-box 10
hg19_v2_chr9_+_33265011_33265059	0.0821408	GLI2	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr11_-_111383064_111383092	0.0819442	GLI2	ENST00000525791.1|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000456861.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000356018.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4
hg19_v2_chr10_+_105314881_105314989	0.0817961	GLI2	ENST00000437579.1|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chrX_-_7066159_7066231	0.0817026	GLI2	ENST00000486446.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000412827.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000424830.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000381077.5|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000540122.1|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1
hg19_v2_chr17_-_40897043_40897087	0.0806897	GLI2	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr10_-_120938303_120938345	0.0795975	GLI2	ENST00000356951.3|PRDX3|ENSG00000165672.5|peroxiredoxin 3 	ENST00000298510.2|PRDX3|ENSG00000165672.5|peroxiredoxin 3
hg19_v2_chrX_-_54384425_54384495	0.0792474	GLI2	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr1_+_12977513_12977513	0.0785102	GLI2	ENST00000330881.5|PRAMEF7|ENSG00000204510.1|PRAME family member 7
hg19_v2_chr20_+_55043647_55043751	0.0779706	GLI2	ENST00000023939.4|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000395881.3|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000357348.5|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000449062.1|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1 	ENST00000435342.2|RTFDC1|ENSG00000022277.8|replication termination factor 2 domain containing 1
hg19_v2_chr1_-_11115877_11115914	0.0761463	GLI2	ENST00000490101.1|SRM|ENSG00000116649.5|spermidine synthase
hg19_v2_chr18_-_60986613_60986662	0.0752179	GLI2	ENST00000444484.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_-_74233480_74233520	0.0747725	GLI2	ENST00000455918.1|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr19_+_49617609_49617681	0.0744293	GLI2	ENST00000221459.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans) 	ENST00000486217.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr9_-_35096545_35096637	0.0741212	GLI2	ENST00000378617.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000341666.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000361778.2|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O
hg19_v2_chr10_-_48416849_48416859	0.0735761	GLI2	ENST00000249598.1|GDF2|ENSG00000128802.3|growth differentiation factor 2
hg19_v2_chr9_-_35958151_35958151	0.0731818	GLI2	ENST00000341959.2|OR2S2|ENSG00000122718.4|olfactory receptor, family 2, subfamily S, member 2
hg19_v2_chr4_+_56815102_56815147	0.0729173	GLI2	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr6_+_29427548_29427548	0.0724645	GLI2	ENST00000377132.1|OR2H1|ENSG00000204688.5|olfactory receptor, family 2, subfamily H, member 1
hg19_v2_chr18_+_9913977_9914088	0.0719641	GLI2	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr11_-_113345842_113345994	0.0705182	GLI2	ENST00000346454.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr12_+_120740119_120740124	0.0702644	GLI2	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr8_-_7320974_7321196	0.0702244	GLI2	ENST00000528943.1|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000359758.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000361111.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000398462.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000297498.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000317900.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B
hg19_v2_chr11_+_1463728_1463760	0.0694704	GLI2	ENST00000544817.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr10_+_104474207_104474297	0.0691987	GLI2	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr5_+_64920543_64920592	0.0689865	GLI2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr10_-_112064665_112064737	0.0688919	GLI2	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr4_-_187476721_187476721	0.0681515	GLI2	ENST00000307161.5|MTNR1A|ENSG00000168412.6|melatonin receptor 1A
hg19_v2_chr10_+_105315102_105315137	0.0678221	GLI2	ENST00000369777.2|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr2_-_136875712_136875735	0.0676842	GLI2	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chrX_-_152989798_152990152	0.0666003	GLI2	ENST00000441714.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000442093.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000429550.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000345046.6|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr20_-_25062767_25062779	0.0661532	GLI2	ENST00000429762.3|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000444511.2|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000376707.3|VSX1|ENSG00000100987.10|visual system homeobox 1
hg19_v2_chr20_-_896960_896978	0.0654515	GLI2	ENST00000381922.3|ANGPT4|ENSG00000101280.6|angiopoietin 4 	ENST00000546022.1|ANGPT4|ENSG00000101280.6|angiopoietin 4
hg19_v2_chr1_-_86861936_86862023	0.0650392	GLI2	ENST00000394733.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000359242.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000294678.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000479890.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000317336.7|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370567.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000394731.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000478286.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370566.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr19_+_49617581_49617607	0.0646329	GLI2	ENST00000391864.3|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr19_-_39466396_39466550	0.0645755	GLI2	ENST00000292852.4|FBXO17|ENSG00000269190.1|F-box protein 17
hg19_v2_chr1_-_42801540_42801562	0.0645725	GLI2	ENST00000372573.1|FOXJ3|ENSG00000198815.4|forkhead box J3
hg19_v2_chr7_+_150498610_150498659	0.0645154	GLI2	ENST00000461345.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr5_-_131347583_131347870	0.0642756	GLI2	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr1_+_203096831_203096864	0.0640604	GLI2	ENST00000337894.4|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr19_-_46142637_46142678	0.0640506	GLI2	ENST00000590043.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000589876.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr20_+_48599506_48599536	0.0639927	GLI2	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr5_+_113769205_113769227	0.0631682	GLI2	ENST00000503706.1|KCNN2|ENSG00000080709.10|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
hg19_v2_chr14_-_36990354_36990397	0.0630027	GLI2	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr15_-_78526942_78527049	0.06211	GLI2	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr19_-_53757941_53758088	0.0616372	GLI2	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr5_-_132113559_132113579	0.0616036	GLI2	ENST00000448933.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr17_+_6899366_6899384	0.0613201	GLI2	ENST00000251535.6|ALOX12|ENSG00000108839.7|arachidonate 12-lipoxygenase
hg19_v2_chr14_-_94759361_94759403	0.0612751	GLI2	ENST00000393096.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr3_-_169899504_169899542	0.0600593	GLI2	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr17_+_56270084_56270098	0.0597949	GLI2	ENST00000225371.5|EPX|ENSG00000121053.5|eosinophil peroxidase
hg19_v2_chr11_-_73309228_73309257	0.0591145	GLI2	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr17_-_76274572_76274581	0.0581449	GLI2	ENST00000374945.1|RP11-219G17.4|ENSG00000204277.1|RP11-219G17.4
hg19_v2_chr6_-_121655552_121655592	0.0574568	GLI2	ENST00000275159.6|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr10_+_76970509_76970606	0.0574462	GLI2	ENST00000332211.6|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000535553.1|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000313132.4|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2
hg19_v2_chr19_+_4247070_4247118	0.0553684	GLI2	ENST00000262962.7|CCDC94|ENSG00000105248.11|coiled-coil domain containing 94
hg19_v2_chr11_+_18416103_18416118	0.0543726	GLI2	ENST00000543445.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000430553.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000396222.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000535451.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr3_-_63849571_63849582	0.0540325	GLI2	ENST00000295899.5|THOC7|ENSG00000163634.7|THO complex 7 homolog (Drosophila)
hg19_v2_chr3_-_47622282_47622282	0.0521339	GLI2	ENST00000383738.2|CSPG5|ENSG00000114646.5|chondroitin sulfate proteoglycan 5 (neuroglycan C) 	ENST00000264723.4|CSPG5|ENSG00000114646.5|chondroitin sulfate proteoglycan 5 (neuroglycan C)
hg19_v2_chr7_+_5919458_5919458	0.0519569	GLI2	ENST00000416608.1|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr16_+_84209539_84209585	0.0515988	GLI2	ENST00000569735.1|DNAAF1|ENSG00000154099.13|dynein, axonemal, assembly factor 1
hg19_v2_chr12_+_50355647_50355661	0.0507233	GLI2	ENST00000293599.6|AQP5|ENSG00000161798.6|aquaporin 5
hg19_v2_chr10_-_105212141_105212183	0.0502946	GLI2	ENST00000369788.3|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr2_+_26467762_26467817	0.0481533	GLI2	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr12_+_123465218_123465295	0.0475928	GLI2	ENST00000412505.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000439686.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr1_-_204654481_204654512	0.0473034	GLI2	ENST00000367176.3|LRRN2|ENSG00000170382.7|leucine rich repeat neuronal 2
hg19_v2_chr19_+_45582453_45582551	0.0470159	GLI2	ENST00000591607.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000591747.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000270257.4|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000391951.2|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000587566.1|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr4_-_57687847_57687911	0.0464699	GLI2	ENST00000504762.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000248701.4|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000506738.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)
hg19_v2_chr16_-_18801643_18801705	0.046274	GLI2	ENST00000322989.4|RPS15A|ENSG00000134419.11|ribosomal protein S15a 	ENST00000563390.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr12_-_7079805_7079988	0.0461029	GLI2	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr22_-_50708781_50708852	0.0459053	GLI2	ENST00000449719.2|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11 	ENST00000330651.6|MAPK11|ENSG00000185386.10|mitogen-activated protein kinase 11
hg19_v2_chr1_-_55266865_55266876	0.0459012	GLI2	ENST00000371274.4|TTC22|ENSG00000006555.6|tetratricopeptide repeat domain 22
hg19_v2_chr17_-_3496171_3496171	0.0455817	GLI2	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr5_-_64920115_64920174	0.0453173	GLI2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr14_-_94759408_94759434	0.0447005	GLI2	ENST00000554723.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr19_+_45445491_45445513	0.0446111	GLI2	ENST00000592954.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000419266.2|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000589057.1|APOC4-APOC2|ENSG00000224916.4|APOC4-APOC2 readthrough (NMD candidate)
hg19_v2_chr19_+_3708376_3708501	0.0444446	GLI2	ENST00000539908.2|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr17_-_7137857_7137869	0.0430669	GLI2	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr9_+_841690_841702	0.0427746	GLI2	ENST00000382276.3|DMRT1|ENSG00000137090.7|doublesex and mab-3 related transcription factor 1
hg19_v2_chr12_-_90024360_90024531	0.0425623	GLI2	ENST00000393164.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr16_+_72088376_72088537	0.0411882	GLI2	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr8_+_94752349_94752349	0.0410404	GLI2	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr17_-_54991395_54991453	0.0410084	GLI2	ENST00000316881.4|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chrX_+_70364667_70364721	0.0409949	GLI2	ENST00000536169.1|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000395855.2|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000374051.3|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000358741.3|NLGN3|ENSG00000196338.8|neuroligin 3
hg19_v2_chr17_-_19062424_19062424	0.0409501	GLI2	ENST00000399083.1|AC007952.6|ENSG00000197665.5|Uncharacterized protein
hg19_v2_chr20_+_57466461_57466482	0.0405876	GLI2	ENST00000306090.10|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr16_+_1290725_1290737	0.040586	GLI2	ENST00000461509.2|TPSAB1|ENSG00000172236.12|tryptase alpha/beta 1
hg19_v2_chr5_-_176923846_176923888	0.0398692	GLI2	ENST00000506537.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr18_+_77794446_77794505	0.0397593	GLI2	ENST00000262197.7|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr1_+_14026722_14026735	0.0392605	GLI2	ENST00000376048.5|PRDM2|ENSG00000116731.18|PR domain containing 2, with ZNF domain
hg19_v2_chr12_+_5541267_5541285	0.0386628	GLI2	ENST00000423158.3|NTF3|ENSG00000185652.7|neurotrophin 3
hg19_v2_chr15_-_53082178_53082209	0.0385091	GLI2	ENST00000305901.5|ONECUT1|ENSG00000169856.7|one cut homeobox 1
hg19_v2_chr2_+_26467825_26467847	0.0378414	GLI2	ENST00000545822.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000425035.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr17_+_7483761_7483825	0.0376761	GLI2	ENST00000584180.1|CD68|ENSG00000129226.9|CD68 molecule
hg19_v2_chr5_+_140044261_140044464	0.0371395	GLI2	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr17_-_54991369_54991388	0.0369656	GLI2	ENST00000537230.1|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr19_-_15343191_15343270	0.0367015	GLI2	ENST00000221730.3|EPHX3|ENSG00000105131.3|epoxide hydrolase 3
hg19_v2_chr4_+_72052964_72053013	0.0366954	GLI2	ENST00000264485.5|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000425175.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr5_-_176923803_176923832	0.0363055	GLI2	ENST00000506161.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr22_-_31688381_31688418	0.0351797	GLI2	ENST00000487265.2|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr16_-_11680791_11680813	0.0341552	GLI2	ENST00000571976.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000413364.2|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr7_+_150498783_150498890	0.0338542	GLI2	ENST00000475536.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A 	ENST00000468689.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr16_-_11945370_11945442	0.0336332	GLI2	ENST00000573251.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000355674.5|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000542106.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000571133.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1
hg19_v2_chr12_-_132628847_132628890	0.0330634	GLI2	ENST00000397333.3|DDX51|ENSG00000185163.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
hg19_v2_chr17_-_202579_202633	0.0330624	GLI2	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr12_+_65563329_65563373	0.0329736	GLI2	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr16_+_30064411_30064428	0.0328796	GLI2	ENST00000338110.5|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr8_+_48920960_48921011	0.0326922	GLI2	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr2_+_220492373_220492391	0.0325673	GLI2	ENST00000317151.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr17_-_7155802_7155821	0.0324104	GLI2	ENST00000572043.1|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1
hg19_v2_chr20_+_44637526_44637554	0.0322362	GLI2	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chr12_-_56709786_56709846	0.0304396	GLI2	ENST00000547423.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein  	ENST00000551475.1|CNPY2|ENSG00000257727.1|canopy FGF signaling regulator 2 	ENST00000548360.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein
hg19_v2_chr4_-_46391367_46391436	0.0303989	GLI2	ENST00000503806.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000356504.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000514090.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000506961.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2
hg19_v2_chr17_-_39580775_39580775	0.0291737	GLI2	ENST00000225550.3|KRT37|ENSG00000108417.3|keratin 37
hg19_v2_chr22_-_50964849_50964903	0.0290776	GLI2	ENST00000543927.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein 	ENST00000423348.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein
hg19_v2_chr3_+_111260856_111260948	0.0284767	GLI2	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr16_-_71842941_71843016	0.0280773	GLI2	ENST00000423132.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000433195.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569748.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000570017.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chrX_+_114423963_114423963	0.0280214	GLI2	ENST00000424776.3|RBMXL3|ENSG00000175718.8|RNA binding motif protein, X-linked-like 3
hg19_v2_chr9_+_139871948_139871968	0.0277949	GLI2	ENST00000224167.2|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000457950.1|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371625.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371623.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain)
hg19_v2_chr19_-_58220517_58220583	0.0276922	GLI2	ENST00000512439.2|ZNF154|ENSG00000179909.11|zinc finger protein 154 	ENST00000426889.1|ZNF154|ENSG00000179909.11|zinc finger protein 154
hg19_v2_chr19_-_10628117_10628130	0.0273773	GLI2	ENST00000333430.4|S1PR5|ENSG00000180739.12|sphingosine-1-phosphate receptor 5
hg19_v2_chr1_-_161207986_161208000	0.0273346	GLI2	ENST00000506209.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367980.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr15_-_27018884_27018935	0.0261648	GLI2	ENST00000299267.4|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr9_+_80850952_80851267	0.0252044	GLI2	ENST00000424347.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000415759.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376597.4|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000277082.5|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376598.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa
hg19_v2_chr3_+_23958470_23958630	0.0245848	GLI2	ENST00000434031.2|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000413699.1|RPL15|ENSG00000174748.14|ribosomal protein L15 	ENST00000456530.2|RPL15|ENSG00000174748.14|ribosomal protein L15
hg19_v2_chr17_-_3819751_3819794	0.024133	GLI2	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chr10_+_98064085_98064163	0.024105	GLI2	ENST00000419175.1|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase 	ENST00000371174.2|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase
hg19_v2_chr1_-_36185073_36185073	0.0240418	GLI2	ENST00000270815.4|C1orf216|ENSG00000142686.7|chromosome 1 open reading frame 216
hg19_v2_chr5_+_161495038_161495056	0.0237396	GLI2	ENST00000393933.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr12_-_13529642_13529664	0.0236968	GLI2	ENST00000318426.2|C12orf36|ENSG00000180861.5|chromosome 12 open reading frame 36
hg19_v2_chr17_-_15522826_15522826	0.0232872	GLI2	ENST00000395906.3|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chr3_+_49591881_49591940	0.0232484	GLI2	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr22_+_46731596_46731658	0.023226	GLI2	ENST00000381019.3|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chr16_-_4897266_4897343	0.0229155	GLI2	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v2_chr1_-_55266926_55266958	0.0224836	GLI2	ENST00000371276.4|TTC22|ENSG00000006555.6|tetratricopeptide repeat domain 22
hg19_v2_chr12_+_112204691_112204781	0.0217471	GLI2	ENST00000416293.3|ALDH2|ENSG00000111275.8|aldehyde dehydrogenase 2 family (mitochondrial) 	ENST00000261733.2|ALDH2|ENSG00000111275.8|aldehyde dehydrogenase 2 family (mitochondrial)
hg19_v2_chrX_-_107334750_107334780	0.0210115	GLI2	ENST00000340200.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372296.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372295.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000361815.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr1_+_150954493_150954528	0.0199949	GLI2	ENST00000368947.4|ANXA9|ENSG00000143412.5|annexin A9
hg19_v2_chr12_+_51632638_51632665	0.018727	GLI2	ENST00000549732.2|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr16_-_30022293_30022401	0.0186499	GLI2	ENST00000565273.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000567332.2|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000350119.4|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chr16_+_84209738_84209748	0.0185514	GLI2	ENST00000564928.1|DNAAF1|ENSG00000154099.13|dynein, axonemal, assembly factor 1
hg19_v2_chr11_+_111473108_111473226	0.0179749	GLI2	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr3_-_128902759_128902770	0.0177791	GLI2	ENST00000422453.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000504813.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000512338.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr22_-_24384240_24384255	0.01771	GLI2	ENST00000439996.2|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1 	ENST00000417870.1|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1
hg19_v2_chr19_-_12834739_12834825	0.0175369	GLI2	ENST00000589337.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000425528.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000441499.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000588216.1|TNPO2|ENSG00000105576.11|transportin 2
hg19_v2_chr8_+_11561660_11561751	0.0167547	GLI2	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr11_-_111957451_111957522	0.016446	GLI2	ENST00000504148.2|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast) 	ENST00000541231.1|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast)
hg19_v2_chr1_-_40157345_40157375	0.0155091	GLI2	ENST00000372844.3|HPCAL4|ENSG00000116983.8|hippocalcin like 4
hg19_v2_chr13_+_97928395_97928458	0.015027	GLI2	ENST00000445661.2|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr6_-_28367510_28367537	0.014899	GLI2	ENST00000361028.1|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr15_+_91478493_91478551	0.0140678	GLI2	ENST00000418476.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr1_-_161208013_161208092	0.0137463	GLI2	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr18_+_77794358_77794418	0.0133864	GLI2	ENST00000306735.5|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr19_-_45873642_45873876	0.0126082	GLI2	ENST00000485403.2|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586856.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586131.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391940.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000221481.6|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391944.3|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391945.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2
hg19_v2_chr19_-_59070239_59070359	0.0120654	GLI2	ENST00000595957.1|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M 	ENST00000253023.3|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M
hg19_v2_chr2_+_131369054_131369054	0.0118874	GLI2	ENST00000409602.1|POTEJ|ENSG00000222038.3|POTE ankyrin domain family, member J
hg19_v2_chr4_-_71705590_71705662	0.0114101	GLI2	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr11_+_18416133_18416251	0.0109152	GLI2	ENST00000227157.4|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000478970.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000495052.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr8_+_1922024_1922069	0.00979337	GLI2	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr12_-_2986107_2986258	0.00877481	GLI2	ENST00000359843.3|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000342628.2|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000361953.3|FOXM1|ENSG00000111206.8|forkhead box M1
hg19_v2_chr1_-_23810664_23810735	0.00818392	GLI2	ENST00000336689.3|ASAP3|ENSG00000088280.14|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 	ENST00000437606.2|ASAP3|ENSG00000088280.14|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
hg19_v2_chr11_+_89764274_89764274	0.00801071	GLI2	ENST00000448984.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C 	ENST00000432771.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C
hg19_v2_chr11_+_46366918_46366992	0.00755401	GLI2	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr9_-_122131696_122131745	0.00746297	GLI2	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr2_+_233390863_233390878	0.00619938	GLI2	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chrX_-_53254358_53254406	0.00616099	GLI2	ENST00000404049.3|KDM5C|ENSG00000126012.7|lysine (K)-specific demethylase 5C
hg19_v2_chr12_-_56709674_56709729	0.00607915	GLI2	ENST00000551286.1|CNPY2|ENSG00000257727.1|canopy FGF signaling regulator 2 	ENST00000549318.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein
hg19_v2_chr5_-_132113036_132113061	0.00497191	GLI2	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr20_+_32782375_32782385	0.00254537	GLI2	ENST00000568305.1|ASIP|ENSG00000101440.5|agouti signaling protein
hg19_v2_chr20_-_32891151_32891168	0.00178459	GLI2	ENST00000217426.2|AHCY|ENSG00000101444.8|adenosylhomocysteinase
hg19_v2_chr3_-_138312971_138313132	0.00143935	GLI2	ENST00000485115.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000484888.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000468900.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000542237.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa 	ENST00000481834.1|CEP70|ENSG00000114107.4|centrosomal protein 70kDa
hg19_v2_chr6_+_116892641_116892726	0.00143726	GLI2	ENST00000487832.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000518117.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr21_-_46964306_46964332	0.00127629	GLI2	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
