hg19_v2_chr4_+_38869410_38869437	5.60701	GUAGUGU	ENST00000358869.2|FAM114A1|ENSG00000197712.7|family with sequence similarity 114, member A1
hg19_v2_chr3_-_123603137_123603203	4.33712	GUAGUGU	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr2_-_161350305_161350391	4.15069	GUAGUGU	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr12_+_66217911_66218018	3.50901	GUAGUGU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr22_-_36236265_36236481	3.18048	GUAGUGU	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr2_+_187454749_187454808	3.00997	GUAGUGU	ENST00000261023.3|ITGAV|ENSG00000138448.7|integrin, alpha V 	ENST00000374907.3|ITGAV|ENSG00000138448.7|integrin, alpha V
hg19_v2_chr6_-_134639180_134639220	2.4008	GUAGUGU	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr12_-_44200052_44200136	2.21661	GUAGUGU	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr6_+_53659746_53659817	2.20549	GUAGUGU	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr16_-_4166186_4166186	2.05758	GUAGUGU	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr3_+_187930719_187930729	1.93096	GUAGUGU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_+_7831323_7831414	1.88165	GUAGUGU	ENST00000054666.6|VAMP3|ENSG00000049245.8|vesicle-associated membrane protein 3
hg19_v2_chr2_-_86790593_86790614	1.84486	GUAGUGU	ENST00000263856.4|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000409225.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3
hg19_v2_chr2_+_9346892_9346948	1.82913	GUAGUGU	ENST00000281419.3|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENST00000315273.4|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
hg19_v2_chr11_+_12695944_12695989	1.81086	GUAGUGU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chrX_+_134166333_134166371	1.78623	GUAGUGU	ENST00000257013.7|FAM127A|ENSG00000134590.9|family with sequence similarity 127, member A
hg19_v2_chr9_-_80646374_80646374	1.50235	GUAGUGU	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr1_+_93913713_93913839	1.42683	GUAGUGU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr9_-_16870704_16870841	1.38824	GUAGUGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chrX_+_37208521_37208539	1.37859	GUAGUGU	ENST00000378628.4|PRRG1|ENSG00000130962.13|proline rich Gla (G-carboxyglutamic acid) 1
hg19_v2_chr10_+_63661053_63661079	1.34476	GUAGUGU	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr2_+_5832799_5832799	1.34077	GUAGUGU	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr6_-_33267101_33267170	1.33197	GUAGUGU	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr17_-_8534067_8534088	1.30606	GUAGUGU	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr16_-_66785699_66785759	1.29201	GUAGUGU	ENST00000258198.2|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr10_-_81205373_81205429	1.22791	GUAGUGU	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr11_+_9406169_9406210	1.18021	GUAGUGU	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr4_-_129208940_129208976	1.12423	GUAGUGU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr2_+_198380289_198380305	1.12181	GUAGUGU	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr7_-_6523755_6523873	1.10436	GUAGUGU	ENST00000436575.1|DAGLB|ENSG00000164535.10|diacylglycerol lipase, beta 	ENST00000258739.4|KDELR2|ENSG00000136240.5|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
hg19_v2_chr11_+_34642656_34642682	1.0303	GUAGUGU	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr3_-_114790179_114790222	1.02413	GUAGUGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_-_102268628_102268693	1.01291	GUAGUGU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr9_-_14314066_14314075	0.998241	GUAGUGU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr19_+_16187085_16187119	0.975677	GUAGUGU	ENST00000300933.4|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr10_+_5726764_5726911	0.97292	GUAGUGU	ENST00000328090.5|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B 	ENST00000496681.1|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B
hg19_v2_chr7_-_123389104_123389161	0.941324	GUAGUGU	ENST00000223023.4|WASL|ENSG00000106299.7|Wiskott-Aldrich syndrome-like
hg19_v2_chr16_+_28875126_28875195	0.936407	GUAGUGU	ENST00000359285.5|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1 	ENST00000538342.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr16_-_87525651_87525651	0.908278	GUAGUGU	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr20_+_8112824_8112925	0.839386	GUAGUGU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr2_-_39664405_39664453	0.829043	GUAGUGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr11_+_70244510_70244696	0.809442	GUAGUGU	ENST00000346329.3|CTTN|ENSG00000085733.11|cortactin 	ENST00000301843.8|CTTN|ENSG00000085733.11|cortactin 	ENST00000376561.3|CTTN|ENSG00000085733.11|cortactin
hg19_v2_chr2_+_148602058_148602185	0.803885	GUAGUGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr11_+_57520715_57520776	0.796904	GUAGUGU	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr22_-_36784035_36784063	0.796042	GUAGUGU	ENST00000216181.5|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr11_-_76381781_76381798	0.793521	GUAGUGU	ENST00000260061.5|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32 	ENST00000404995.1|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32
hg19_v2_chr7_+_6414128_6414185	0.786065	GUAGUGU	ENST00000348035.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 	ENST00000356142.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg19_v2_chr19_-_15560730_15560772	0.780459	GUAGUGU	ENST00000389282.4|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs 	ENST00000263381.7|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr10_+_134351319_134351353	0.749423	GUAGUGU	ENST00000368594.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa 	ENST00000368593.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa
hg19_v2_chr19_+_54694119_54694214	0.748132	GUAGUGU	ENST00000456872.1|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000302937.4|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000429671.2|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit
hg19_v2_chr3_+_128968437_128968505	0.730506	GUAGUGU	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chrX_-_134186144_134186228	0.712262	GUAGUGU	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr7_-_151217001_151217019	0.694878	GUAGUGU	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr14_-_81687197_81687280	0.68018	GUAGUGU	ENST00000553612.1|GTF2A1|ENSG00000165417.7|general transcription factor IIA, 1, 19/37kDa
hg19_v2_chr21_-_44846999_44847017	0.651311	GUAGUGU	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr1_+_25071848_25071944	0.634174	GUAGUGU	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr3_-_50396978_50397041	0.628393	GUAGUGU	ENST00000266025.3|TMEM115|ENSG00000126062.3|transmembrane protein 115
hg19_v2_chr3_+_100428268_100428287	0.62346	GUAGUGU	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr2_-_11484710_11484812	0.612912	GUAGUGU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr4_-_139163491_139163510	0.608147	GUAGUGU	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr6_-_30712313_30712332	0.589517	GUAGUGU	ENST00000376377.2|IER3|ENSG00000137331.11|immediate early response 3 	ENST00000259874.5|IER3|ENSG00000137331.11|immediate early response 3
hg19_v2_chr6_+_34857019_34857117	0.575475	GUAGUGU	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr10_-_32345305_32345376	0.569527	GUAGUGU	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr7_-_41742697_41742714	0.559148	GUAGUGU	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr21_-_39288743_39288765	0.545241	GUAGUGU	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr11_-_85780086_85780161	0.540472	GUAGUGU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr12_+_122516626_122516645	0.497326	GUAGUGU	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr14_-_23504087_23504118	0.488859	GUAGUGU	ENST00000493471.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5 	ENST00000460922.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr17_-_4167142_4167281	0.450716	GUAGUGU	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr21_-_39870339_39870443	0.443999	GUAGUGU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chrX_-_153285395_153285431	0.440585	GUAGUGU	ENST00000369980.3|IRAK1|ENSG00000184216.7|interleukin-1 receptor-associated kinase 1
hg19_v2_chr20_-_61569227_61569287	0.422478	GUAGUGU	ENST00000266070.4|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000395335.2|DIDO1|ENSG00000101191.12|death inducer-obliterator 1 	ENST00000266071.5|DIDO1|ENSG00000101191.12|death inducer-obliterator 1
hg19_v2_chr5_+_35856951_35857002	0.41825	GUAGUGU	ENST00000303115.3|IL7R|ENSG00000168685.10|interleukin 7 receptor 	ENST00000343305.4|IL7R|ENSG00000168685.10|interleukin 7 receptor 	ENST00000506850.1|IL7R|ENSG00000168685.10|interleukin 7 receptor 	ENST00000511982.1|IL7R|ENSG00000168685.10|interleukin 7 receptor
hg19_v2_chr10_+_17686124_17686192	0.407041	GUAGUGU	ENST00000377524.3|STAM|ENSG00000136738.10|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
hg19_v2_chr11_+_120207787_120207962	0.395799	GUAGUGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr9_+_36190853_36190904	0.395072	GUAGUGU	ENST00000433436.2|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000538225.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000540080.1|CLTA|ENSG00000122705.12|clathrin, light chain A
hg19_v2_chr18_+_67956135_67956144	0.392598	GUAGUGU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr13_+_49550015_49550070	0.391572	GUAGUGU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chrX_-_102942961_102943011	0.39024	GUAGUGU	ENST00000434230.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000418819.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000360458.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr11_-_796197_796361	0.381198	GUAGUGU	ENST00000530360.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000528606.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000320230.5|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chrX_-_41782249_41782287	0.367557	GUAGUGU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr17_+_2699697_2699776	0.364499	GUAGUGU	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr17_-_27278304_27278408	0.362521	GUAGUGU	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr1_+_87170247_87170276	0.358452	GUAGUGU	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chrX_+_49687216_49687265	0.355653	GUAGUGU	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr8_+_9413410_9413451	0.342764	GUAGUGU	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr10_-_61666267_61666414	0.328432	GUAGUGU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr15_-_78369994_78370069	0.319724	GUAGUGU	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chr12_-_117628333_117628339	0.307133	GUAGUGU	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr6_+_114178512_114178586	0.292939	GUAGUGU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr1_+_28099683_28099694	0.290439	GUAGUGU	ENST00000373943.4|STX12|ENSG00000117758.9|syntaxin 12
hg19_v2_chr17_-_48474828_48474914	0.278723	GUAGUGU	ENST00000576448.1|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59 	ENST00000225972.7|LRRC59|ENSG00000108829.9|leucine rich repeat containing 59
hg19_v2_chr1_+_218519577_218519594	0.277942	GUAGUGU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr1_+_224544552_224544570	0.243319	GUAGUGU	ENST00000465271.1|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4 	ENST00000366858.3|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4
hg19_v2_chr9_-_127703333_127703398	0.236854	GUAGUGU	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr10_+_31608054_31608156	0.234407	GUAGUGU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr11_+_13299186_13299432	0.231351	GUAGUGU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr10_-_119806085_119806114	0.226949	GUAGUGU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr14_+_103851712_103851878	0.225791	GUAGUGU	ENST00000440884.3|MARK3|ENSG00000075413.13|MAP/microtubule affinity-regulating kinase 3 	ENST00000416682.2|MARK3|ENSG00000075413.13|MAP/microtubule affinity-regulating kinase 3 	ENST00000429436.2|MARK3|ENSG00000075413.13|MAP/microtubule affinity-regulating kinase 3 	ENST00000303622.9|MARK3|ENSG00000075413.13|MAP/microtubule affinity-regulating kinase 3
hg19_v2_chr3_+_23986748_23986761	0.223566	GUAGUGU	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr16_+_10971037_10971076	0.221592	GUAGUGU	ENST00000324288.8|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator 	ENST00000381835.5|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator
hg19_v2_chr5_-_133512683_133512729	0.217341	GUAGUGU	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr1_-_205719295_205719404	0.206014	GUAGUGU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr6_-_74363803_74363878	0.204951	GUAGUGU	ENST00000355773.5|SLC17A5|ENSG00000119899.11|solute carrier family 17 (acidic sugar transporter), member 5
hg19_v2_chr6_-_132834184_132834337	0.204007	GUAGUGU	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr17_+_47865917_47866068	0.196088	GUAGUGU	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr11_+_111473108_111473226	0.181168	GUAGUGU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr4_+_699537_699600	0.174844	GUAGUGU	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr5_+_140625147_140625147	0.17049	GUAGUGU	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr5_-_101632153_101632253	0.168918	GUAGUGU	ENST00000310954.6|SLCO4C1|ENSG00000173930.8|solute carrier organic anion transporter family, member 4C1
hg19_v2_chr2_-_43453734_43453751	0.167473	GUAGUGU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr5_+_95066823_95066879	0.160195	GUAGUGU	ENST00000506817.1|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3 	ENST00000379982.3|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3
hg19_v2_chr1_-_78148324_78148365	0.14951	GUAGUGU	ENST00000370801.3|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3 	ENST00000433749.1|ZZZ3|ENSG00000036549.8|zinc finger, ZZ-type containing 3
hg19_v2_chr6_-_36953833_36954074	0.133326	GUAGUGU	ENST00000538808.1|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000460219.1|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000373616.5|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000373627.5|MTCH1|ENSG00000137409.14|mitochondrial carrier 1
hg19_v2_chr16_-_18937726_18937776	0.133107	GUAGUGU	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr1_+_32645269_32645292	0.131907	GUAGUGU	ENST00000373610.3|TXLNA|ENSG00000084652.11|taxilin alpha
hg19_v2_chr2_-_65357225_65357267	0.126697	GUAGUGU	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr3_+_10857885_10857920	0.124246	GUAGUGU	ENST00000254488.2|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11 	ENST00000454147.1|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11
hg19_v2_chr20_-_30310336_30310400	0.112867	GUAGUGU	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr5_-_114961858_114961876	0.0977453	GUAGUGU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr8_+_61429416_61429502	0.0973322	GUAGUGU	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr19_+_45596218_45596260	0.0917893	GUAGUGU	ENST00000421905.1|PPP1R37|ENSG00000104866.6|protein phosphatase 1, regulatory subunit 37 	ENST00000221462.4|PPP1R37|ENSG00000104866.6|protein phosphatase 1, regulatory subunit 37
hg19_v2_chr11_+_117014983_117015017	0.084699	GUAGUGU	ENST00000527958.1|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000419197.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000304808.6|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 	ENST00000529887.2|PAFAH1B2|ENSG00000168092.9|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
hg19_v2_chr17_+_44668035_44668100	0.0833565	GUAGUGU	ENST00000398238.4|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor 	ENST00000225282.8|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr17_-_62340581_62340671	0.0822557	GUAGUGU	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr10_+_97803151_97803348	0.0793429	GUAGUGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr2_+_135676381_135676435	0.0750971	GUAGUGU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr2_+_198365122_198365137	0.0740358	GUAGUGU	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr18_-_33647487_33647547	0.0735271	GUAGUGU	ENST00000590898.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000357384.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000319040.6|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000588737.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000399022.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A
hg19_v2_chr20_-_3996036_3996153	0.0664998	GUAGUGU	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr5_+_112043186_112043225	0.061725	GUAGUGU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr4_-_16077741_16077760	0.060886	GUAGUGU	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr1_+_66797687_66797884	0.0587773	GUAGUGU	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr5_-_35230771_35230794	0.0454095	GUAGUGU	ENST00000342362.5|PRLR|ENSG00000113494.12|prolactin receptor
hg19_v2_chr12_-_54582655_54582780	0.0349528	GUAGUGU	ENST00000504338.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514685.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000504797.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000513838.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000505128.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000337581.3|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000503306.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000243112.5|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514196.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000506169.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000507904.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000508394.2|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v2_chr6_+_163835669_163835693	0.0343146	GUAGUGU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr2_+_210444142_210444194	0.0229296	GUAGUGU	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr11_-_65381643_65381767	0.020087	GUAGUGU	ENST00000309100.3|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000529839.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000526293.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr1_+_214161272_214161322	0.0155472	GUAGUGU	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr3_+_93781728_93781760	0.00984945	GUAGUGU	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr1_+_94883931_94883980	0.00909801	GUAGUGU	ENST00000394233.2|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3 	ENST00000454898.2|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3 	ENST00000536817.1|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3
