hg19_v2_chr21_-_15918618_15918671	2.23436	HOXC12_HOXD12	ENST00000400564.1|SAMSN1|ENSG00000155307.13|SAM domain, SH3 domain and nuclear localization signals 1 	ENST00000400566.1|SAMSN1|ENSG00000155307.13|SAM domain, SH3 domain and nuclear localization signals 1
hg19_v2_chr7_+_150065278_150065369	1.54798	HOXC12_HOXD12	ENST00000519397.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000479668.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000540729.1|REPIN1|ENSG00000214022.7|replication initiator 1
hg19_v2_chr6_+_13272904_13272989	1.45749	HOXC12_HOXD12	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr18_-_53253323_53253359	1.45224	HOXC12_HOXD12	ENST00000540999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000563888.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_-_246670519_246670611	1.45142	HOXC12_HOXD12	ENST00000388985.4|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3 	ENST00000490107.1|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr2_-_152146385_152146571	1.42575	HOXC12_HOXD12	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr17_+_45286706_45286766	1.40929	HOXC12_HOXD12	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr18_-_53253112_53253199	1.39621	HOXC12_HOXD12	ENST00000568673.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000562847.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000568147.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chrX_+_49294472_49294472	1.30492	HOXC12_HOXD12	ENST00000361446.5|GAGE12B|ENSG00000236737.1|G antigen 12B
hg19_v2_chr10_-_52383644_52383743	1.29884	HOXC12_HOXD12	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr12_-_15114492_15114565	1.2714	HOXC12_HOXD12	ENST00000541546.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr10_+_31608054_31608156	1.2624	HOXC12_HOXD12	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr12_-_15114603_15114631	1.22952	HOXC12_HOXD12	ENST00000228945.4|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr11_+_111896320_111896332	1.1792	HOXC12_HOXD12	ENST00000531306.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase 	ENST00000537636.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase
hg19_v2_chr7_+_152456904_152456915	1.10926	HOXC12_HOXD12	ENST00000537264.1|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr6_+_26199737_26199754	1.0969	HOXC12_HOXD12	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr1_+_158975744_158975769	1.06241	HOXC12_HOXD12	ENST00000426592.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr11_+_67351019_67351066	1.03968	HOXC12_HOXD12	ENST00000398606.3|GSTP1|ENSG00000084207.11|glutathione S-transferase pi 1
hg19_v2_chr1_+_192544857_192544912	1.0321	HOXC12_HOXD12	ENST00000367459.3|RGS1|ENSG00000090104.7|regulator of G-protein signaling 1 	ENST00000469578.2|RGS1|ENSG00000090104.7|regulator of G-protein signaling 1
hg19_v2_chr22_-_20307532_20307603	1.02093	HOXC12_HOXD12	ENST00000405465.3|DGCR6L|ENSG00000128185.5|DiGeorge syndrome critical region gene 6-like 	ENST00000248879.3|DGCR6L|ENSG00000128185.5|DiGeorge syndrome critical region gene 6-like
hg19_v2_chr19_-_48752812_48752925	0.98693	HOXC12_HOXD12	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr19_-_48753104_48753123	0.981524	HOXC12_HOXD12	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr22_+_23134974_23134990	0.944044	HOXC12_HOXD12	ENST00000390314.2|IGLV2-11|ENSG00000211668.2|immunoglobulin lambda variable 2-11
hg19_v2_chr1_-_220219775_220219859	0.889529	HOXC12_HOXD12	ENST00000609181.1|EPRS|ENSG00000136628.13|glutamyl-prolyl-tRNA synthetase
hg19_v2_chr12_-_10007448_10007448	0.888781	HOXC12_HOXD12	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr1_+_158900568_158900586	0.886225	HOXC12_HOXD12	ENST00000458222.1|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1
hg19_v2_chr8_-_33370607_33370676	0.884185	HOXC12_HOXD12	ENST00000360742.5|TTI2|ENSG00000129696.8|TELO2 interacting protein 2 	ENST00000523305.1|TTI2|ENSG00000129696.8|TELO2 interacting protein 2
hg19_v2_chr22_+_23101182_23101198	0.874962	HOXC12_HOXD12	ENST00000390312.2|IGLV2-14|ENSG00000211666.2|immunoglobulin lambda variable 2-14
hg19_v2_chr19_-_23941680_23941704	0.857304	HOXC12_HOXD12	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr12_+_113354341_113354422	0.851091	HOXC12_HOXD12	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr5_+_169010638_169010799	0.829906	HOXC12_HOXD12	ENST00000265295.4|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000506574.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000515224.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000508247.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000513941.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr19_+_21265028_21265056	0.81343	HOXC12_HOXD12	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr2_+_172778952_172779004	0.811511	HOXC12_HOXD12	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chr8_-_38008783_38008783	0.75029	HOXC12_HOXD12	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr11_+_67351213_67351261	0.736991	HOXC12_HOXD12	ENST00000398603.1|GSTP1|ENSG00000084207.11|glutathione S-transferase pi 1
hg19_v2_chr2_-_136875712_136875735	0.736452	HOXC12_HOXD12	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr3_-_172241250_172241297	0.733698	HOXC12_HOXD12	ENST00000420541.2|TNFSF10|ENSG00000121858.6|tumor necrosis factor (ligand) superfamily, member 10 	ENST00000241261.2|TNFSF10|ENSG00000121858.6|tumor necrosis factor (ligand) superfamily, member 10
hg19_v2_chr7_+_64838712_64838778	0.727608	HOXC12_HOXD12	ENST00000328747.7|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000431504.1|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000357512.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr6_-_26199499_26199528	0.726182	HOXC12_HOXD12	ENST00000377831.5|HIST1H3D|ENSG00000197409.6|histone cluster 1, H3d
hg19_v2_chr15_+_79166065_79166163	0.722301	HOXC12_HOXD12	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr7_+_64838786_64838809	0.702553	HOXC12_HOXD12	ENST00000450302.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr11_+_111896090_111896207	0.70098	HOXC12_HOXD12	ENST00000393051.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase
hg19_v2_chr1_-_173176452_173176477	0.695758	HOXC12_HOXD12	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr7_+_152456829_152456900	0.694912	HOXC12_HOXD12	ENST00000377776.3|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000256001.8|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast) 	ENST00000397282.2|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr1_-_220220000_220220019	0.662667	HOXC12_HOXD12	ENST00000366923.3|EPRS|ENSG00000136628.13|glutamyl-prolyl-tRNA synthetase
hg19_v2_chr9_+_134065506_134065509	0.623877	HOXC12_HOXD12	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr1_-_23886285_23886336	0.603751	HOXC12_HOXD12	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr3_+_4535025_4535040	0.57747	HOXC12_HOXD12	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr9_+_2029019_2029164	0.576892	HOXC12_HOXD12	ENST00000382194.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr14_+_90422239_90422381	0.575157	HOXC12_HOXD12	ENST00000393452.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000554180.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000393454.2|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553617.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000335725.4|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000357382.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000556867.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553527.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1
hg19_v2_chr2_-_136873735_136873813	0.554831	HOXC12_HOXD12	ENST00000409817.1|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chrX_+_99899180_99899215	0.550334	HOXC12_HOXD12	ENST00000373004.3|SRPX2|ENSG00000102359.5|sushi-repeat containing protein, X-linked 2
hg19_v2_chr11_-_107729887_107729927	0.542625	HOXC12_HOXD12	ENST00000525815.1|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr11_-_5255861_5255888	0.541871	HOXC12_HOXD12	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr2_-_225811747_225811796	0.523637	HOXC12_HOXD12	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr12_+_4758264_4758314	0.51113	HOXC12_HOXD12	ENST00000266544.5|NDUFA9|ENSG00000139180.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
hg19_v2_chr6_+_34725263_34725331	0.508875	HOXC12_HOXD12	ENST00000374018.1|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C 	ENST00000374017.3|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C
hg19_v2_chr12_+_6603253_6603303	0.504594	HOXC12_HOXD12	ENST00000382457.4|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2 	ENST00000545962.1|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2
hg19_v2_chr17_+_56769924_56770000	0.502736	HOXC12_HOXD12	ENST00000461271.1|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000583539.1|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000337432.4|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000421782.2|RAD51C|ENSG00000108384.10|RAD51 paralog C
hg19_v2_chr22_-_36925186_36925231	0.495248	HOXC12_HOXD12	ENST00000541106.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000455547.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000432675.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr7_+_90339169_90339182	0.488222	HOXC12_HOXD12	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr5_-_176433693_176433812	0.482749	HOXC12_HOXD12	ENST00000507513.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1 	ENST00000511320.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1
hg19_v2_chr12_+_120105558_120105694	0.479157	HOXC12_HOXD12	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr5_-_176433582_176433620	0.477193	HOXC12_HOXD12	ENST00000506128.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1
hg19_v2_chr2_-_170430366_170430390	0.47636	HOXC12_HOXD12	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr22_-_36924944_36925044	0.47508	HOXC12_HOXD12	ENST00000405442.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000402116.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr15_+_66797627_66797684	0.467147	HOXC12_HOXD12	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr3_+_179322573_179322614	0.462452	HOXC12_HOXD12	ENST00000493866.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000472629.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000482604.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr1_-_169680745_169680839	0.456979	HOXC12_HOXD12	ENST00000236147.4|SELL|ENSG00000188404.4|selectin L
hg19_v2_chr4_-_70626314_70626325	0.45614	HOXC12_HOXD12	ENST00000510821.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr11_-_67275542_67275562	0.452089	HOXC12_HOXD12	ENST00000531506.1|CDK2AP2|ENSG00000167797.3|cyclin-dependent kinase 2 associated protein 2
hg19_v2_chr6_-_26199471_26199494	0.451397	HOXC12_HOXD12	ENST00000341023.1|HIST1H2AD|ENSG00000196866.2|histone cluster 1, H2ad
hg19_v2_chr22_-_32058166_32058229	0.447196	HOXC12_HOXD12	ENST00000435900.1|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase 	ENST00000336566.4|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase
hg19_v2_chr18_-_5544241_5544280	0.44065	HOXC12_HOXD12	ENST00000341928.2|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3 	ENST00000540638.2|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr6_+_34725181_34725195	0.427663	HOXC12_HOXD12	ENST00000244520.5|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C
hg19_v2_chr17_+_29664830_29664844	0.42677	HOXC12_HOXD12	ENST00000444181.2|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000417592.2|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr15_+_66797455_66797483	0.425056	HOXC12_HOXD12	ENST00000446801.2|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr7_-_27219849_27219880	0.424383	HOXC12_HOXD12	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr12_-_10251603_10251619	0.421698	HOXC12_HOXD12	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr17_+_18759612_18759689	0.418175	HOXC12_HOXD12	ENST00000432893.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000414602.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000574522.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000570450.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000419071.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v2_chr11_-_102668879_102668898	0.417958	HOXC12_HOXD12	ENST00000315274.6|MMP1|ENSG00000196611.4|matrix metallopeptidase 1 (interstitial collagenase)
hg19_v2_chr6_-_34855773_34855866	0.40156	HOXC12_HOXD12	ENST00000420584.2|TAF11|ENSG00000064995.12|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 	ENST00000361288.4|TAF11|ENSG00000064995.12|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa
hg19_v2_chr22_+_18893736_18893804	0.39918	HOXC12_HOXD12	ENST00000331444.6|DGCR6|ENSG00000183628.8|DiGeorge syndrome critical region gene 6
hg19_v2_chr4_+_122722466_122722556	0.395049	HOXC12_HOXD12	ENST00000243498.5|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000379663.3|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000509800.1|EXOSC9|ENSG00000123737.8|exosome component 9
hg19_v2_chr1_-_156647189_156647207	0.384694	HOXC12_HOXD12	ENST00000368223.3|NES|ENSG00000132688.10|nestin
hg19_v2_chr8_-_60031762_60031803	0.381652	HOXC12_HOXD12	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chr15_-_55657428_55657474	0.373456	HOXC12_HOXD12	ENST00000568543.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr15_+_78441663_78441733	0.369334	HOXC12_HOXD12	ENST00000299518.2|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000558554.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000557826.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000561279.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000559186.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000560770.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000559881.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000559205.1|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha 	ENST00000441490.2|IDH3A|ENSG00000166411.9|isocitrate dehydrogenase 3 (NAD+) alpha
hg19_v2_chr11_+_7618413_7618427	0.366302	HOXC12_HOXD12	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr17_-_8113542_8113572	0.363339	HOXC12_HOXD12	ENST00000578549.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000535053.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000582368.1|AURKB|ENSG00000178999.8|aurora kinase B
hg19_v2_chr16_+_67906919_67906937	0.359542	HOXC12_HOXD12	ENST00000358933.5|EDC4|ENSG00000038358.10|enhancer of mRNA decapping 4
hg19_v2_chr14_-_22005343_22005364	0.356754	HOXC12_HOXD12	ENST00000327430.3|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr13_+_34392185_34392191	0.350239	HOXC12_HOXD12	ENST00000380071.3|RFC3|ENSG00000133119.8|replication factor C (activator 1) 3, 38kDa
hg19_v2_chr7_+_134331550_134331593	0.346637	HOXC12_HOXD12	ENST00000344924.3|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase 	ENST00000418040.1|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase 	ENST00000393132.2|BPGM|ENSG00000172331.7|2,3-bisphosphoglycerate mutase
hg19_v2_chr13_+_53030107_53030147	0.340625	HOXC12_HOXD12	ENST00000490903.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000480747.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr22_-_29107919_29108032	0.333555	HOXC12_HOXD12	ENST00000434810.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000456369.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr10_+_12238171_12238241	0.32097	HOXC12_HOXD12	ENST00000378900.2|CDC123|ENSG00000151465.9|cell division cycle 123 	ENST00000442050.1|CDC123|ENSG00000151465.9|cell division cycle 123
hg19_v2_chr17_+_46184911_46184951	0.320922	HOXC12_HOXD12	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chr4_+_39460620_39460656	0.316003	HOXC12_HOXD12	ENST00000340169.2|LIAS|ENSG00000121897.9|lipoic acid synthetase 	ENST00000261434.3|LIAS|ENSG00000121897.9|lipoic acid synthetase
hg19_v2_chr1_+_100818009_100818072	0.303684	HOXC12_HOXD12	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr17_+_10600894_10600974	0.300453	HOXC12_HOXD12	ENST00000379774.4|ADPRM|ENSG00000170222.11|ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
hg19_v2_chr11_-_3400442_3400453	0.299101	HOXC12_HOXD12	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr8_+_27950619_27950739	0.296648	HOXC12_HOXD12	ENST00000542181.1|ELP3|ENSG00000134014.12|elongator acetyltransferase complex subunit 3 	ENST00000524103.1|ELP3|ENSG00000134014.12|elongator acetyltransferase complex subunit 3 	ENST00000537665.1|ELP3|ENSG00000134014.12|elongator acetyltransferase complex subunit 3 	ENST00000380353.4|ELP3|ENSG00000134014.12|elongator acetyltransferase complex subunit 3 	ENST00000520288.1|ELP3|ENSG00000134014.12|elongator acetyltransferase complex subunit 3
hg19_v2_chr10_+_12237924_12237982	0.291317	HOXC12_HOXD12	ENST00000429258.2|CDC123|ENSG00000151465.9|cell division cycle 123 	ENST00000281141.4|CDC123|ENSG00000151465.9|cell division cycle 123
hg19_v2_chr12_+_10658201_10658201	0.288019	HOXC12_HOXD12	ENST00000322446.3|EIF2S3L|ENSG00000180574.3|Putative eukaryotic translation initiation factor 2 subunit 3-like protein
hg19_v2_chr4_+_106631966_106632003	0.285091	HOXC12_HOXD12	ENST00000360505.5|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000510865.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000509336.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr12_+_67663056_67663067	0.283918	HOXC12_HOXD12	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr6_-_112080256_112080334	0.278809	HOXC12_HOXD12	ENST00000462856.2|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES 	ENST00000229471.4|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES
hg19_v2_chr4_-_76957214_76957350	0.278582	HOXC12_HOXD12	ENST00000306621.3|CXCL11|ENSG00000169248.8|chemokine (C-X-C motif) ligand 11
hg19_v2_chr19_-_22018966_22019010	0.27534	HOXC12_HOXD12	ENST00000599906.1|ZNF43|ENSG00000198521.7|zinc finger protein 43 	ENST00000354959.4|ZNF43|ENSG00000198521.7|zinc finger protein 43
hg19_v2_chr1_+_199996702_199996732	0.26982	HOXC12_HOXD12	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr8_+_1993152_1993168	0.265043	HOXC12_HOXD12	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr20_-_44540686_44540804	0.264502	HOXC12_HOXD12	ENST00000477313.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000542937.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000372431.3|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000354050.4|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000420868.2|PLTP|ENSG00000100979.10|phospholipid transfer protein
hg19_v2_chr16_+_20818020_20818066	0.264129	HOXC12_HOXD12	ENST00000564274.1|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp  	ENST00000563068.1|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp
hg19_v2_chr17_-_34890732_34890754	0.26348	HOXC12_HOXD12	ENST00000268852.9|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr3_+_179322481_179322494	0.26008	HOXC12_HOXD12	ENST00000259037.3|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr19_+_58281014_58281074	0.259012	HOXC12_HOXD12	ENST00000391702.3|ZNF586|ENSG00000083828.11|zinc finger protein 586 	ENST00000598885.1|ZNF586|ENSG00000083828.11|zinc finger protein 586 	ENST00000598183.1|ZNF586|ENSG00000083828.11|zinc finger protein 586 	ENST00000396154.2|ZNF586|ENSG00000083828.11|zinc finger protein 586 	ENST00000599802.1|ZNF586|ENSG00000083828.11|zinc finger protein 586 	ENST00000396150.4|ZNF586|ENSG00000083828.11|zinc finger protein 586
hg19_v2_chr10_-_98031265_98031306	0.257977	HOXC12_HOXD12	ENST00000224337.5|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000371176.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr13_+_111855414_111855417	0.256254	HOXC12_HOXD12	ENST00000375737.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr19_+_49496705_49496776	0.255452	HOXC12_HOXD12	ENST00000595090.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr11_-_3400330_3400422	0.254381	HOXC12_HOXD12	ENST00000427810.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000005082.9|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000534569.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000438262.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528796.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528410.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000529678.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000354599.6|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000526601.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000525502.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000533036.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000399602.4|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr10_+_51371390_51371436	0.252713	HOXC12_HOXD12	ENST00000478381.1|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000451577.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000374098.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast) 	ENST00000374097.2|TIMM23B|ENSG00000204152.6|translocase of inner mitochondrial membrane 23 homolog B (yeast)
hg19_v2_chr1_+_171750776_171750870	0.250878	HOXC12_HOXD12	ENST00000458517.1|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000362019.3|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000367737.5|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000361735.3|METTL13|ENSG00000010165.15|methyltransferase like 13
hg19_v2_chr19_+_21579908_21579949	0.247792	HOXC12_HOXD12	ENST00000596302.1|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000392288.2|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000594390.1|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000355504.4|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr3_-_56502375_56502428	0.247452	HOXC12_HOXD12	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr18_+_9103957_9104080	0.246667	HOXC12_HOXD12	ENST00000400033.1|NDUFV2|ENSG00000178127.8|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa
hg19_v2_chr12_+_32832134_32832196	0.245704	HOXC12_HOXD12	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr7_+_138145076_138145116	0.24029	HOXC12_HOXD12	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr17_-_34890709_34890730	0.23924	HOXC12_HOXD12	ENST00000544606.1|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr1_-_202896310_202896406	0.236858	HOXC12_HOXD12	ENST00000367261.3|KLHL12|ENSG00000117153.11|kelch-like family member 12
hg19_v2_chr16_-_3450963_3451065	0.236124	HOXC12_HOXD12	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chr8_+_1993173_1993199	0.235105	HOXC12_HOXD12	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr2_-_70475730_70475798	0.234933	HOXC12_HOXD12	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr7_+_2443202_2443260	0.233543	HOXC12_HOXD12	ENST00000258711.6|CHST12|ENSG00000136213.7|carbohydrate (chondroitin 4) sulfotransferase 12
hg19_v2_chr19_+_2785458_2785548	0.229938	HOXC12_HOXD12	ENST00000307741.6|THOP1|ENSG00000172009.10|thimet oligopeptidase 1 	ENST00000585338.1|THOP1|ENSG00000172009.10|thimet oligopeptidase 1
hg19_v2_chr10_-_75226166_75226169	0.229269	HOXC12_HOXD12	ENST00000544628.1|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr5_+_159656437_159656517	0.228894	HOXC12_HOXD12	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr12_-_30848914_30848948	0.225376	HOXC12_HOXD12	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr11_-_32457075_32457095	0.225235	HOXC12_HOXD12	ENST00000448076.3|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr19_+_13885252_13885293	0.224992	HOXC12_HOXD12	ENST00000221576.4|C19orf53|ENSG00000104979.4|chromosome 19 open reading frame 53
hg19_v2_chr12_-_108154925_108154945	0.223544	HOXC12_HOXD12	ENST00000228437.5|PRDM4|ENSG00000110851.7|PR domain containing 4
hg19_v2_chr1_-_158656488_158656511	0.219798	HOXC12_HOXD12	ENST00000368147.4|SPTA1|ENSG00000163554.7|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg19_v2_chr2_-_89521942_89521942	0.219611	HOXC12_HOXD12	ENST00000482769.1|IGKV2-28|ENSG00000244116.1|immunoglobulin kappa variable 2-28
hg19_v2_chr4_-_69536346_69536371	0.219602	HOXC12_HOXD12	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chrX_-_15619076_15619137	0.218049	HOXC12_HOXD12	ENST00000252519.3|ACE2|ENSG00000130234.6|angiotensin I converting enzyme 2
hg19_v2_chr9_-_77502636_77502795	0.217991	HOXC12_HOXD12	ENST00000449912.2|TRPM6|ENSG00000119121.17|transient receptor potential cation channel, subfamily M, member 6
hg19_v2_chr2_+_37571845_37571874	0.216144	HOXC12_HOXD12	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr12_-_71182695_71182762	0.213954	HOXC12_HOXD12	ENST00000342084.4|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr4_-_46911248_46911270	0.213866	HOXC12_HOXD12	ENST00000355591.3|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2 	ENST00000505102.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr2_+_37571717_37571779	0.212818	HOXC12_HOXD12	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr14_-_82089405_82089428	0.210666	HOXC12_HOXD12	ENST00000554211.1|RP11-799P8.1|ENSG00000258977.1|RP11-799P8.1
hg19_v2_chr2_-_88285309_88285309	0.205131	HOXC12_HOXD12	ENST00000420840.2|RGPD2|ENSG00000185304.12|RANBP2-like and GRIP domain containing 2
hg19_v2_chr10_-_98031310_98031338	0.200119	HOXC12_HOXD12	ENST00000427367.2|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000413476.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr2_-_86564776_86564813	0.200053	HOXC12_HOXD12	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr1_-_53686261_53686329	0.19979	HOXC12_HOXD12	ENST00000294360.4|C1orf123|ENSG00000162384.9|chromosome 1 open reading frame 123
hg19_v2_chr10_-_99052382_99052413	0.198422	HOXC12_HOXD12	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr4_-_46911223_46911230	0.195393	HOXC12_HOXD12	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr10_-_51623203_51623338	0.194543	HOXC12_HOXD12	ENST00000444743.1|TIMM23|ENSG00000138297.9|translocase of inner mitochondrial membrane 23 homolog (yeast) 	ENST00000374065.3|TIMM23|ENSG00000138297.9|translocase of inner mitochondrial membrane 23 homolog (yeast) 	ENST00000374064.3|TIMM23|ENSG00000138297.9|translocase of inner mitochondrial membrane 23 homolog (yeast) 	ENST00000260867.4|TIMM23|ENSG00000138297.9|translocase of inner mitochondrial membrane 23 homolog (yeast)
hg19_v2_chr7_+_138818490_138818541	0.19442	HOXC12_HOXD12	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr19_+_49496782_49496873	0.193702	HOXC12_HOXD12	ENST00000601968.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2 	ENST00000596837.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr19_+_49497121_49497166	0.192876	HOXC12_HOXD12	ENST00000413176.2|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr7_-_32529973_32530030	0.191087	HOXC12_HOXD12	ENST00000410044.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409987.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409782.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000450169.2|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr5_-_156569754_156569786	0.189268	HOXC12_HOXD12	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr13_-_79233314_79233331	0.184809	HOXC12_HOXD12	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr20_-_17539456_17539605	0.184695	HOXC12_HOXD12	ENST00000544874.1|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin 	ENST00000377868.2|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin
hg19_v2_chrX_-_133792480_133792522	0.184106	HOXC12_HOXD12	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chrX_-_138724677_138724887	0.182406	HOXC12_HOXD12	ENST00000370573.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000338585.6|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000370576.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence
hg19_v2_chr10_-_27443294_27443321	0.178674	HOXC12_HOXD12	ENST00000396296.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000375972.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000376016.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000491542.2|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr6_+_57182400_57182440	0.17758	HOXC12_HOXD12	ENST00000607273.1|PRIM2|ENSG00000146143.13|primase, DNA, polypeptide 2 (58kDa)
hg19_v2_chr8_+_107738240_107738340	0.177237	HOXC12_HOXD12	ENST00000449762.2|OXR1|ENSG00000164830.13|oxidation resistance 1 	ENST00000297447.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr3_-_186288097_186288113	0.176879	HOXC12_HOXD12	ENST00000446782.1|TBCCD1|ENSG00000113838.8|TBCC domain containing 1
hg19_v2_chr18_+_72167096_72167133	0.17663	HOXC12_HOXD12	ENST00000324301.8|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr5_-_146781153_146781188	0.174905	HOXC12_HOXD12	ENST00000520473.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr14_+_88471468_88471500	0.174043	HOXC12_HOXD12	ENST00000267549.3|GPR65|ENSG00000140030.4|G protein-coupled receptor 65
hg19_v2_chr1_+_12977513_12977513	0.173753	HOXC12_HOXD12	ENST00000330881.5|PRAMEF7|ENSG00000204510.1|PRAME family member 7
hg19_v2_chr4_-_120243545_120243562	0.172455	HOXC12_HOXD12	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr5_-_175815565_175815763	0.172422	HOXC12_HOXD12	ENST00000509257.1|NOP16|ENSG00000048162.15|NOP16 nucleolar protein 	ENST00000507413.1|NOP16|ENSG00000048162.15|NOP16 nucleolar protein 	ENST00000510123.1|NOP16|ENSG00000048162.15|NOP16 nucleolar protein
hg19_v2_chr4_-_69434245_69434245	0.172104	HOXC12_HOXD12	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v2_chr1_-_35450897_35450954	0.169603	HOXC12_HOXD12	ENST00000373337.3|ZMYM6NB|ENSG00000243749.1|ZMYM6 neighbor
hg19_v2_chr3_-_17783990_17784155	0.169597	HOXC12_HOXD12	ENST00000429383.4|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000446863.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000414349.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000428355.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000425944.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000445294.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000444471.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000415814.2|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5
hg19_v2_chr6_+_19837592_19837621	0.169521	HOXC12_HOXD12	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr6_-_27782548_27782607	0.16915	HOXC12_HOXD12	ENST00000333151.3|HIST1H2AJ|ENSG00000182611.3|histone cluster 1, H2aj
hg19_v2_chr7_+_138145145_138145209	0.168439	HOXC12_HOXD12	ENST00000415680.2|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr17_+_71228740_71228776	0.166336	HOXC12_HOXD12	ENST00000268942.8|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000359042.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr8_-_93029865_93029904	0.166215	HOXC12_HOXD12	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr1_-_101491319_101491355	0.164869	HOXC12_HOXD12	ENST00000342173.7|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000488176.1|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000370109.3|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5
hg19_v2_chr2_-_225362533_225362546	0.161071	HOXC12_HOXD12	ENST00000451538.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr19_-_45996465_45996525	0.160339	HOXC12_HOXD12	ENST00000430715.2|RTN2|ENSG00000125744.7|reticulon 2
hg19_v2_chrY_+_26997726_26997726	0.160264	HOXC12_HOXD12	ENST00000382296.2|DAZ4|ENSG00000205916.6|deleted in azoospermia 4
hg19_v2_chr8_-_80942061_80942086	0.159389	HOXC12_HOXD12	ENST00000519386.1|MRPS28|ENSG00000147586.5|mitochondrial ribosomal protein S28
hg19_v2_chr1_+_200993071_200993094	0.158024	HOXC12_HOXD12	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr2_+_169926047_169926086	0.156921	HOXC12_HOXD12	ENST00000428522.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000450153.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9 	ENST00000421653.1|DHRS9|ENSG00000073737.12|dehydrogenase/reductase (SDR family) member 9
hg19_v2_chr8_-_63998590_63998634	0.15391	HOXC12_HOXD12	ENST00000260116.4|TTPA|ENSG00000137561.4|tocopherol (alpha) transfer protein
hg19_v2_chr20_+_36932521_36932532	0.153713	HOXC12_HOXD12	ENST00000262865.4|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr9_+_133569108_133569193	0.14684	HOXC12_HOXD12	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
hg19_v2_chr2_+_170335924_170336039	0.143305	HOXC12_HOXD12	ENST00000554017.1|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5 	ENST00000513963.1|RP11-724O16.1|ENSG00000251569.1|Bardet-Biedl syndrome 5 protein; Uncharacterized protein  	ENST00000392663.2|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5
hg19_v2_chr3_+_137906154_137906192	0.14198	HOXC12_HOXD12	ENST00000466749.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000358441.2|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000489213.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr19_-_49955050_49955095	0.141237	HOXC12_HOXD12	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr7_+_28452130_28452154	0.139087	HOXC12_HOXD12	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr10_+_124913930_124913946	0.13891	HOXC12_HOXD12	ENST00000368858.5|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr19_-_23869999_23870022	0.138572	HOXC12_HOXD12	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr2_-_70475701_70475717	0.13756	HOXC12_HOXD12	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr17_-_39526052_39526052	0.13405	HOXC12_HOXD12	ENST00000251646.3|KRT33B|ENSG00000131738.5|keratin 33B
hg19_v2_chr12_+_32832203_32832270	0.133768	HOXC12_HOXD12	ENST00000553257.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000549701.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000358214.5|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000266481.6|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000551476.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000550154.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000547312.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000414834.2|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000381000.4|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000548750.1|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr18_+_12703002_12703066	0.133271	HOXC12_HOXD12	ENST00000590217.1|PSMG2|ENSG00000128789.16|proteasome (prosome, macropain) assembly chaperone 2
hg19_v2_chr4_+_110354928_110355030	0.131155	HOXC12_HOXD12	ENST00000504968.2|SEC24B|ENSG00000138802.7|SEC24 family member B 	ENST00000399100.2|SEC24B|ENSG00000138802.7|SEC24 family member B 	ENST00000265175.5|SEC24B|ENSG00000138802.7|SEC24 family member B
hg19_v2_chr1_-_67266939_67266939	0.130535	HOXC12_HOXD12	ENST00000304526.2|INSL5|ENSG00000172410.4|insulin-like 5
hg19_v2_chr17_-_73127353_73127633	0.12845	HOXC12_HOXD12	ENST00000580423.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000578337.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000582160.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr1_+_28099683_28099694	0.122933	HOXC12_HOXD12	ENST00000373943.4|STX12|ENSG00000117758.9|syntaxin 12
hg19_v2_chr5_-_180670370_180670382	0.120225	HOXC12_HOXD12	ENST00000502844.1|GNB2L1|ENSG00000204628.7|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
hg19_v2_chr7_+_100551239_100551256	0.118775	HOXC12_HOXD12	ENST00000319509.7|MUC3A|ENSG00000169894.13|mucin 3A, cell surface associated
hg19_v2_chr17_-_73127826_73127890	0.118299	HOXC12_HOXD12	ENST00000582170.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000245552.2|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr1_+_149230680_149230716	0.114992	HOXC12_HOXD12	ENST00000443018.1|RP11-403I13.5|ENSG00000232721.1|RP11-403I13.5
hg19_v2_chr11_-_19223523_19223589	0.114806	HOXC12_HOXD12	ENST00000265968.3|CSRP3|ENSG00000129170.4|cysteine and glycine-rich protein 3 (cardiac LIM protein)
hg19_v2_chr4_+_6202448_6202488	0.106352	HOXC12_HOXD12	ENST00000508601.1|RP11-586D19.1|ENSG00000249896.1|RP11-586D19.1
hg19_v2_chr10_+_124913793_124913927	0.102303	HOXC12_HOXD12	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr17_-_34890759_34890815	0.101693	HOXC12_HOXD12	ENST00000431794.3|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr8_-_101718991_101719023	0.101686	HOXC12_HOXD12	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr3_-_196911002_196911116	0.0994513	HOXC12_HOXD12	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr5_+_140227357_140227357	0.0984236	HOXC12_HOXD12	ENST00000378122.3|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr1_+_171107241_171107241	0.0979968	HOXC12_HOXD12	ENST00000236166.3|FMO6P|ENSG00000117507.4|flavin containing monooxygenase 6 pseudogene
hg19_v2_chr2_+_217277137_217277266	0.0961996	HOXC12_HOXD12	ENST00000430374.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000357276.4|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000444508.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
hg19_v2_chr17_+_71228793_71228838	0.0949379	HOXC12_HOXD12	ENST00000426147.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr6_+_26204825_26204858	0.0944991	HOXC12_HOXD12	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr2_-_211179883_211179914	0.0935786	HOXC12_HOXD12	ENST00000352451.3|MYL1|ENSG00000168530.11|myosin, light chain 1, alkali; skeletal, fast
hg19_v2_chr16_-_18908196_18908278	0.0931517	HOXC12_HOXD12	ENST00000565324.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000561947.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr6_+_32812568_32812631	0.0919853	HOXC12_HOXD12	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr9_-_98269481_98269691	0.0907731	HOXC12_HOXD12	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr4_-_95264008_95264035	0.0889781	HOXC12_HOXD12	ENST00000295256.5|HPGDS|ENSG00000163106.6|hematopoietic prostaglandin D synthase
hg19_v2_chr19_+_18668672_18668708	0.0860037	HOXC12_HOXD12	ENST00000601630.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000599000.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000595073.1|KXD1|ENSG00000105700.6|KxDL motif containing 1 	ENST00000596785.1|KXD1|ENSG00000105700.6|KxDL motif containing 1
hg19_v2_chr17_+_21730180_21730256	0.085676	HOXC12_HOXD12	ENST00000584398.1|UBBP4|ENSG00000263563.1|ubiquitin B pseudogene 4
hg19_v2_chr12_-_122751002_122751068	0.084277	HOXC12_HOXD12	ENST00000267199.4|VPS33A|ENSG00000139719.5|vacuolar protein sorting 33 homolog A (S. cerevisiae)
hg19_v2_chr15_+_101459420_101459585	0.0833638	HOXC12_HOXD12	ENST00000388948.3|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000284395.5|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000534045.1|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1 	ENST00000532029.2|LRRK1|ENSG00000154237.8|leucine-rich repeat kinase 1
hg19_v2_chr2_+_89986318_89986323	0.0833517	HOXC12_HOXD12	ENST00000491977.1|IGKV2D-29|ENSG00000243264.1|immunoglobulin kappa variable 2D-29
hg19_v2_chr19_+_21579958_21579975	0.0830616	HOXC12_HOXD12	ENST00000339914.6|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000599461.1|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr17_+_11501816_11501834	0.0829561	HOXC12_HOXD12	ENST00000454412.2|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr16_-_20364122_20364200	0.0805896	HOXC12_HOXD12	ENST00000396138.4|UMOD|ENSG00000169344.11|uromodulin 	ENST00000577168.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr13_-_24895566_24895566	0.0802441	HOXC12_HOXD12	ENST00000422229.2|AL359736.1|ENSG00000205850.6|protein PCOTH isoform 1
hg19_v2_chr8_-_21669826_21669869	0.0792546	HOXC12_HOXD12	ENST00000517328.1|GFRA2|ENSG00000168546.6|GDNF family receptor alpha 2
hg19_v2_chr19_-_51340469_51340469	0.0771263	HOXC12_HOXD12	ENST00000326856.4|KLK15|ENSG00000174562.9|kallikrein-related peptidase 15
hg19_v2_chr8_-_87755878_87755933	0.075994	HOXC12_HOXD12	ENST00000320005.5|CNGB3|ENSG00000170289.8|cyclic nucleotide gated channel beta 3
hg19_v2_chr8_-_105479270_105479289	0.0757972	HOXC12_HOXD12	ENST00000521573.2|DPYS|ENSG00000147647.8|dihydropyrimidinase 	ENST00000351513.2|DPYS|ENSG00000147647.8|dihydropyrimidinase
hg19_v2_chr14_+_21359558_21359580	0.0754479	HOXC12_HOXD12	ENST00000304639.3|RNASE3|ENSG00000169397.3|ribonuclease, RNase A family, 3
hg19_v2_chr19_-_39523165_39523236	0.0752567	HOXC12_HOXD12	ENST00000509137.2|FBXO27|ENSG00000161243.4|F-box protein 27 	ENST00000292853.4|FBXO27|ENSG00000161243.4|F-box protein 27
hg19_v2_chr14_-_50319758_50319921	0.0712507	HOXC12_HOXD12	ENST00000298310.5|NEMF|ENSG00000165525.13|nuclear export mediator factor
hg19_v2_chr1_+_117297007_117297099	0.0700913	HOXC12_HOXD12	ENST00000369478.3|CD2|ENSG00000116824.4|CD2 molecule 	ENST00000369477.1|CD2|ENSG00000116824.4|CD2 molecule
hg19_v2_chr16_-_88878305_88878362	0.0697599	HOXC12_HOXD12	ENST00000569616.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000563655.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000567713.1|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000426324.2|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase 	ENST00000378364.3|APRT|ENSG00000198931.6|adenine phosphoribosyltransferase
hg19_v2_chr4_-_74088800_74088844	0.067713	HOXC12_HOXD12	ENST00000509867.2|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr11_+_71900572_71900602	0.0673796	HOXC12_HOXD12	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr4_-_123843597_123843766	0.066755	HOXC12_HOXD12	ENST00000510735.1|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENST00000304430.5|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg19_v2_chr1_+_59775752_59775763	0.0661955	HOXC12_HOXD12	ENST00000371212.1|FGGY|ENSG00000172456.12|FGGY carbohydrate kinase domain containing
hg19_v2_chr2_-_27435125_27435182	0.0658316	HOXC12_HOXD12	ENST00000414408.1|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 	ENST00000310574.3|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
hg19_v2_chr20_-_48782639_48782743	0.0640623	HOXC12_HOXD12	ENST00000435301.2|RP11-112L6.3|ENSG00000237595.2|RP11-112L6.3
hg19_v2_chr19_-_14945933_14945972	0.0637629	HOXC12_HOXD12	ENST00000322301.3|OR7A5|ENSG00000188269.4|olfactory receptor, family 7, subfamily A, member 5
hg19_v2_chr19_-_54876414_54876472	0.0609917	HOXC12_HOXD12	ENST00000474878.1|LAIR1|ENSG00000167613.11|leukocyte-associated immunoglobulin-like receptor 1 	ENST00000348231.4|LAIR1|ENSG00000167613.11|leukocyte-associated immunoglobulin-like receptor 1
hg19_v2_chr1_+_15736359_15736463	0.0586321	HOXC12_HOXD12	ENST00000375980.4|EFHD2|ENSG00000142634.8|EF-hand domain family, member D2
hg19_v2_chr1_+_213224572_213224686	0.0574742	HOXC12_HOXD12	ENST00000543470.1|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000366960.3|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000366959.3|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000543354.1|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1
hg19_v2_chr17_-_34890665_34890705	0.0568882	HOXC12_HOXD12	ENST00000586007.1|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr3_-_195310802_195310818	0.0566319	HOXC12_HOXD12	ENST00000421243.1|APOD|ENSG00000189058.4|apolipoprotein D 	ENST00000453131.1|APOD|ENSG00000189058.4|apolipoprotein D
hg19_v2_chr19_-_11456935_11457003	0.0551156	HOXC12_HOXD12	ENST00000590788.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586590.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000589655.1|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family 	ENST00000589555.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586956.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000593256.2|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000447337.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000591677.1|TMEM205|ENSG00000105518.9|transmembrane protein 205 	ENST00000586701.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chr1_-_78444776_78444800	0.0530088	HOXC12_HOXD12	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr19_+_15838834_15838834	0.0524477	HOXC12_HOXD12	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr11_+_30252549_30252565	0.0478093	HOXC12_HOXD12	ENST00000254122.3|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide 	ENST00000417547.1|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide
hg19_v2_chr13_+_53029564_53029650	0.047399	HOXC12_HOXD12	ENST00000468284.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378034.3|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000258607.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378037.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr18_+_63417864_63417889	0.0463577	HOXC12_HOXD12	ENST00000536984.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr3_-_131221790_131221835	0.0449592	HOXC12_HOXD12	ENST00000512877.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000264995.3|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000511168.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000425847.2|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3
hg19_v2_chr2_+_234545148_234545161	0.044115	HOXC12_HOXD12	ENST00000373445.1|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr9_-_98269699_98269723	0.0439652	HOXC12_HOXD12	ENST00000429896.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr17_+_11501748_11501806	0.0432972	HOXC12_HOXD12	ENST00000262442.4|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9 	ENST00000579828.1|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr16_+_2273558_2273637	0.0402717	HOXC12_HOXD12	ENST00000301727.4|E4F1|ENSG00000167967.11|E4F transcription factor 1 	ENST00000565090.1|E4F1|ENSG00000167967.11|E4F transcription factor 1 	ENST00000564139.1|E4F1|ENSG00000167967.11|E4F transcription factor 1
hg19_v2_chr22_+_22676808_22676828	0.0402464	HOXC12_HOXD12	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr13_-_47471155_47471214	0.0372434	HOXC12_HOXD12	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr14_+_57046500_57046529	0.0369442	HOXC12_HOXD12	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr1_-_216978709_216978728	0.034477	HOXC12_HOXD12	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr2_-_228497888_228498036	0.0337305	HOXC12_HOXD12	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chr4_-_103790026_103790072	0.0334107	HOXC12_HOXD12	ENST00000338145.3|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000357194.6|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr9_-_95166884_95166908	0.0333848	HOXC12_HOXD12	ENST00000375561.5|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr12_-_13248562_13248596	0.0332277	HOXC12_HOXD12	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr11_-_5173599_5173599	0.0332043	HOXC12_HOXD12	ENST00000328942.1|OR52A1|ENSG00000182070.4|olfactory receptor, family 52, subfamily A, member 1
hg19_v2_chr18_-_19994830_19994830	0.0319422	HOXC12_HOXD12	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr5_-_39274617_39274636	0.0293099	HOXC12_HOXD12	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr1_+_202830876_202830891	0.0293045	HOXC12_HOXD12	ENST00000456105.2|RP11-480I12.7|ENSG00000234996.3|RP11-480I12.7
hg19_v2_chr12_-_13248598_13248630	0.027698	HOXC12_HOXD12	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr2_-_136594740_136594760	0.0276751	HOXC12_HOXD12	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr14_-_50319482_50319564	0.0252574	HOXC12_HOXD12	ENST00000546046.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000555970.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000554626.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000545773.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000556672.1|NEMF|ENSG00000165525.13|nuclear export mediator factor
hg19_v2_chr22_-_32766972_32766996	0.0247034	HOXC12_HOXD12	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr14_+_66975213_66975239	0.0242872	HOXC12_HOXD12	ENST00000543237.1|GPHN|ENSG00000171723.11|gephyrin 	ENST00000305960.9|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr6_-_36515177_36515270	0.0214503	HOXC12_HOXD12	ENST00000229812.7|STK38|ENSG00000112079.8|serine/threonine kinase 38
hg19_v2_chr2_-_177502254_177502360	0.0212967	HOXC12_HOXD12	ENST00000339037.3|AC017048.3|ENSG00000163364.5|long intergenic non-protein coding RNA 1116
hg19_v2_chr7_+_49813255_49813269	0.0195766	HOXC12_HOXD12	ENST00000340652.4|VWC2|ENSG00000188730.4|von Willebrand factor C domain containing 2
hg19_v2_chr6_+_30539153_30539255	0.0192696	HOXC12_HOXD12	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr1_+_36396677_36396749	0.0190361	HOXC12_HOXD12	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr19_+_13858593_13858680	0.0185264	HOXC12_HOXD12	ENST00000221554.8|CCDC130|ENSG00000104957.9|coiled-coil domain containing 130
hg19_v2_chrX_+_118425471_118425492	0.0154953	HOXC12_HOXD12	ENST00000428222.1|RP5-1139I1.1|ENSG00000230392.1|RP5-1139I1.1
hg19_v2_chr13_+_49551020_49551097	0.0148657	HOXC12_HOXD12	ENST00000541916.1|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr1_+_24117693_24117717	0.0140612	HOXC12_HOXD12	ENST00000374503.3|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374502.3|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr8_-_144699668_144699737	0.0126151	HOXC12_HOXD12	ENST00000425753.2|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B
hg19_v2_chr9_-_26892765_26892822	0.0115818	HOXC12_HOXD12	ENST00000520187.1|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1 	ENST00000333916.5|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1
hg19_v2_chr15_-_90222642_90222658	0.0115301	HOXC12_HOXD12	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr8_-_144699628_144699656	0.0114564	HOXC12_HOXD12	ENST00000529048.1|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B 	ENST00000529064.1|TSTA3|ENSG00000104522.11|tissue specific transplantation antigen P35B
hg19_v2_chr9_-_88896977_88897023	0.00912537	HOXC12_HOXD12	ENST00000311534.6|ISCA1|ENSG00000135070.9|iron-sulfur cluster assembly 1
hg19_v2_chr17_+_7517264_7517382	0.00492097	HOXC12_HOXD12	ENST00000593717.1|AC007421.1|ENSG00000268503.1|AC007421.1	ENST00000572182.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000574539.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000576728.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000575314.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000570547.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000572262.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000576478.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr1_+_151735431_151735446	0.0034584	HOXC12_HOXD12	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr11_+_46366918_46366992	0.00322504	HOXC12_HOXD12	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr14_-_71001708_71001746	0.00101492	HOXC12_HOXD12	ENST00000256389.3|ADAM20|ENSG00000134007.3|ADAM metallopeptidase domain 20
hg19_v2_chr2_+_67624430_67624479	0.000908318	HOXC12_HOXD12	ENST00000272342.5|ETAA1|ENSG00000143971.7|Ewing tumor-associated antigen 1
hg19_v2_chr17_-_39637392_39637404	0.000491495	HOXC12_HOXD12	ENST00000246639.2|KRT35|ENSG00000197079.4|keratin 35 	ENST00000393989.1|KRT35|ENSG00000197079.4|keratin 35
hg19_v2_chr19_+_42212526_42212576	0.000337812	HOXC12_HOXD12	ENST00000598976.1|CEA|ENSG00000267881.1|Uncharacterized protein  	ENST00000221992.6|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000405816.1|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000435837.2|CEA|ENSG00000267881.1|Uncharacterized protein
