hg19_v2_chr1_-_173176452_173176477	2.24199	HOXC9	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr6_-_52859046_52859201	1.96237	HOXC9	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr7_+_130126165_130126202	1.24304	HOXC9	ENST00000427521.1|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000416162.2|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000378576.4|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr12_-_91546926_91546972	1.17908	HOXC9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr7_+_130126012_130126069	1.13763	HOXC9	ENST00000341441.5|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr8_-_17555164_17555204	0.935623	HOXC9	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr5_-_111093167_111093252	0.912829	HOXC9	ENST00000446294.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000419114.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr4_-_70626314_70626325	0.897778	HOXC9	ENST00000510821.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr12_+_75874580_75874661	0.805032	HOXC9	ENST00000456650.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr1_+_220863187_220863187	0.723507	HOXC9	ENST00000294889.5|C1orf115|ENSG00000162817.6|chromosome 1 open reading frame 115
hg19_v2_chr8_-_17579726_17579759	0.715152	HOXC9	ENST00000381861.3|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr4_-_70626430_70626434	0.714353	HOXC9	ENST00000310613.3|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chrX_+_15525426_15525441	0.706238	HOXC9	ENST00000342014.6|BMX|ENSG00000102010.10|BMX non-receptor tyrosine kinase
hg19_v2_chr18_+_32558208_32558340	0.689237	HOXC9	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr3_+_138066539_138066580	0.638132	HOXC9	ENST00000289104.4|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr1_+_163039143_163039159	0.629928	HOXC9	ENST00000531057.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000527809.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000367908.4|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4
hg19_v2_chr11_+_19798964_19799013	0.627871	HOXC9	ENST00000527559.2|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr5_-_16738451_16738523	0.602109	HOXC9	ENST00000274203.9|MYO10|ENSG00000145555.10|myosin X 	ENST00000515803.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr6_+_83903061_83903113	0.570752	HOXC9	ENST00000369724.4|RWDD2A|ENSG00000013392.6|RWD domain containing 2A 	ENST00000539997.1|RWDD2A|ENSG00000013392.6|RWD domain containing 2A
hg19_v2_chr16_-_12897642_12897874	0.561102	HOXC9	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr13_-_24007815_24007872	0.512394	HOXC9	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr12_-_25055177_25055258	0.504709	HOXC9	ENST00000538118.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr5_-_16916624_16916641	0.494187	HOXC9	ENST00000513882.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr19_-_48752812_48752925	0.462579	HOXC9	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr8_-_93029865_93029904	0.461181	HOXC9	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr19_-_48753104_48753123	0.454913	HOXC9	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr6_-_52859968_52860149	0.451903	HOXC9	ENST00000370959.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr16_-_66764119_66764138	0.445108	HOXC9	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr1_+_221051699_221051699	0.433601	HOXC9	ENST00000366903.6|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr13_-_33760216_33760234	0.423479	HOXC9	ENST00000255486.4|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr2_+_109204909_109204928	0.386563	HOXC9	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_81771806_81771876	0.38635	HOXC9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr3_+_122785895_122786001	0.368716	HOXC9	ENST00000316218.7|PDIA5|ENSG00000065485.13|protein disulfide isomerase family A, member 5
hg19_v2_chr21_-_27423339_27423352	0.364054	HOXC9	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr10_-_13344341_13344412	0.341984	HOXC9	ENST00000396920.3|PHYH|ENSG00000107537.9|phytanoyl-CoA 2-hydroxylase
hg19_v2_chr11_+_114310102_114310118	0.319675	HOXC9	ENST00000265881.5|REXO2|ENSG00000076043.5|RNA exonuclease 2
hg19_v2_chr12_-_30887948_30887997	0.318256	HOXC9	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr2_+_37571845_37571874	0.309292	HOXC9	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr2_+_109237717_109237729	0.30926	HOXC9	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr2_+_37571717_37571779	0.306223	HOXC9	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr5_-_10761206_10761421	0.301304	HOXC9	ENST00000432074.2|DAP|ENSG00000112977.11|death-associated protein 	ENST00000230895.6|DAP|ENSG00000112977.11|death-associated protein
hg19_v2_chr7_+_80275621_80275648	0.296509	HOXC9	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr5_-_42811986_42812001	0.293416	HOXC9	ENST00000511224.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000507920.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000510965.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr2_+_162016916_162016954	0.293129	HOXC9	ENST00000405852.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr11_+_114310164_114310236	0.285396	HOXC9	ENST00000544196.1|REXO2|ENSG00000076043.5|RNA exonuclease 2 	ENST00000539754.1|REXO2|ENSG00000076043.5|RNA exonuclease 2 	ENST00000539275.1|REXO2|ENSG00000076043.5|RNA exonuclease 2
hg19_v2_chr11_+_5710919_5710932	0.269117	HOXC9	ENST00000379965.3|TRIM22|ENSG00000132274.11|tripartite motif containing 22 	ENST00000425490.1|TRIM22|ENSG00000132274.11|tripartite motif containing 22
hg19_v2_chr7_+_80275752_80275779	0.269079	HOXC9	ENST00000419819.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr16_+_22501658_22501658	0.263397	HOXC9	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr5_-_42812143_42812181	0.258574	HOXC9	ENST00000514985.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr11_+_71900572_71900602	0.2576	HOXC9	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr20_+_57414743_57414785	0.253689	HOXC9	ENST00000313949.7|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr20_-_33732952_33732959	0.252273	HOXC9	ENST00000541621.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr9_+_131549610_131549629	0.249772	HOXC9	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr2_+_109204743_109204855	0.246756	HOXC9	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr6_-_111804905_111804921	0.244735	HOXC9	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chrX_+_153775821_153775864	0.241627	HOXC9	ENST00000263518.6|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000470142.1|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000393549.2|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000455588.2|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 	ENST00000369602.3|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
hg19_v2_chrX_-_9734004_9734027	0.241194	HOXC9	ENST00000467482.1|GPR143|ENSG00000101850.8|G protein-coupled receptor 143 	ENST00000380929.2|GPR143|ENSG00000101850.8|G protein-coupled receptor 143
hg19_v2_chr2_+_162016804_162016814	0.236342	HOXC9	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_-_86850949_86851023	0.236279	HOXC9	ENST00000237455.4|RNF103|ENSG00000239305.2|ring finger protein 103
hg19_v2_chr1_+_158979792_158979814	0.230379	HOXC9	ENST00000359709.3|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16 	ENST00000430894.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr3_+_149191723_149191761	0.22405	HOXC9	ENST00000305354.4|TM4SF4|ENSG00000169903.6|transmembrane 4 L six family member 4
hg19_v2_chr11_+_71900703_71900725	0.22361	HOXC9	ENST00000393681.2|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr12_-_90049878_90049890	0.222182	HOXC9	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr2_+_202047596_202047621	0.218375	HOXC9	ENST00000286186.6|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000360132.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr12_-_90049828_90049847	0.216771	HOXC9	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr4_+_71600144_71600159	0.216354	HOXC9	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr2_+_109271481_109271509	0.215375	HOXC9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr7_-_22539771_22539824	0.214389	HOXC9	ENST00000406890.2|STEAP1B|ENSG00000105889.10|STEAP family member 1B 	ENST00000424363.1|STEAP1B|ENSG00000105889.10|STEAP family member 1B
hg19_v2_chr2_-_70475701_70475717	0.211629	HOXC9	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr10_+_45495898_45495923	0.208418	HOXC9	ENST00000298299.3|ZNF22|ENSG00000165512.4|zinc finger protein 22
hg19_v2_chr7_+_80275953_80275969	0.20674	HOXC9	ENST00000538969.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000544133.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000433696.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr2_+_161993412_161993453	0.202333	HOXC9	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr10_+_115614370_115614436	0.201768	HOXC9	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr2_+_162016827_162016876	0.195105	HOXC9	ENST00000429217.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000406287.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000402568.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr22_-_32651326_32651340	0.192153	HOXC9	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr11_-_13517565_13517728	0.189817	HOXC9	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr22_+_21133469_21133469	0.186687	HOXC9	ENST00000406799.1|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr2_-_70475730_70475798	0.183316	HOXC9	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr13_-_30424821_30424847	0.181731	HOXC9	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr4_+_69681710_69681716	0.177925	HOXC9	ENST00000265403.7|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10 	ENST00000458688.2|UGT2B10|ENSG00000109181.7|UDP glucuronosyltransferase 2 family, polypeptide B10
hg19_v2_chr17_+_42264556_42264649	0.176908	HOXC9	ENST00000319511.6|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589785.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000592825.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589184.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr15_-_90222610_90222634	0.176076	HOXC9	ENST00000300055.5|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr6_+_158733692_158733692	0.172824	HOXC9	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr2_-_231989808_231989832	0.171194	HOXC9	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr9_+_137979506_137979585	0.16892	HOXC9	ENST00000539529.1|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000392991.4|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000371793.3|OLFM1|ENSG00000130558.14|olfactomedin 1
hg19_v2_chr15_-_90222642_90222658	0.167903	HOXC9	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr6_-_83903600_83903655	0.158234	HOXC9	ENST00000506587.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000507554.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3
hg19_v2_chr1_+_157963063_157963094	0.155955	HOXC9	ENST00000360089.4|KIRREL|ENSG00000183853.13|kin of IRRE like (Drosophila) 	ENST00000368173.3|KIRREL|ENSG00000183853.13|kin of IRRE like (Drosophila) 	ENST00000392272.2|KIRREL|ENSG00000183853.13|kin of IRRE like (Drosophila)
hg19_v2_chr1_+_35734562_35734573	0.155936	HOXC9	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr2_+_202047843_202047918	0.149389	HOXC9	ENST00000272879.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000374650.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000346817.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000313728.7|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000448480.1|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr5_-_125930929_125931110	0.146219	HOXC9	ENST00000553117.1|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000447989.2|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1 	ENST00000409134.3|ALDH7A1|ENSG00000164904.11|aldehyde dehydrogenase 7 family, member A1
hg19_v2_chr19_-_48894104_48894170	0.145217	HOXC9	ENST00000597017.1|KDELR1|ENSG00000105438.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
hg19_v2_chr16_-_66584059_66584315	0.138815	HOXC9	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr9_+_131549483_131549606	0.13215	HOXC9	ENST00000372648.5|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13 	ENST00000539497.1|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr7_-_44122063_44122139	0.129892	HOXC9	ENST00000335195.6|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000395831.3|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000414235.1|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000452049.1|POLM|ENSG00000122678.10|polymerase (DNA directed), mu 	ENST00000242248.5|POLM|ENSG00000122678.10|polymerase (DNA directed), mu
hg19_v2_chr1_-_148347506_148347506	0.129884	HOXC9	ENST00000369189.3|NBPF20|ENSG00000203832.6|neuroblastoma breakpoint family, member 20
hg19_v2_chr17_+_68071389_68071426	0.127786	HOXC9	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr1_-_147599549_147599549	0.126583	HOXC9	ENST00000369228.5|NBPF24|ENSG00000203836.7|neuroblastoma breakpoint family, member 24
hg19_v2_chrX_-_135338503_135338641	0.126004	HOXC9	ENST00000370663.5|MAP7D3|ENSG00000129680.11|MAP7 domain containing 3
hg19_v2_chr2_+_161993465_161993481	0.124732	HOXC9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr9_-_98079965_98080008	0.124195	HOXC9	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr3_-_48130707_48130789	0.12359	HOXC9	ENST00000360240.6|MAP4|ENSG00000047849.17|microtubule-associated protein 4 	ENST00000383737.4|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr1_+_151735431_151735446	0.123524	HOXC9	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr22_+_32149927_32150081	0.122404	HOXC9	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chrX_-_130423200_130423228	0.113958	HOXC9	ENST00000361420.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr19_-_46105411_46105481	0.113299	HOXC9	ENST00000323040.4|GPR4|ENSG00000177464.4|G protein-coupled receptor 4 	ENST00000544371.1|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr19_+_21106081_21106207	0.111614	HOXC9	ENST00000300540.3|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000595854.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000601284.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000328178.8|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000599885.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000596476.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000345030.6|ZNF85|ENSG00000105750.10|zinc finger protein 85
hg19_v2_chr3_+_138340049_138340056	0.109624	HOXC9	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr15_+_45003675_45003724	0.105861	HOXC9	ENST00000558401.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000559916.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000544417.1|B2M|ENSG00000166710.13|beta-2-microglobulin
hg19_v2_chr17_-_40288449_40288502	0.10578	HOXC9	ENST00000552162.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000550504.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr2_-_225811747_225811796	0.102456	HOXC9	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr20_+_57414795_57414811	0.100426	HOXC9	ENST00000371098.2|GNAS|ENSG00000087460.19|GNAS complex locus 	ENST00000371075.3|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr16_+_71560023_71560052	0.0999932	HOXC9	ENST00000572450.1|CHST4|ENSG00000140835.8|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
hg19_v2_chr16_+_71560154_71560170	0.0970571	HOXC9	ENST00000539698.3|CHST4|ENSG00000140835.8|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
hg19_v2_chr2_-_209010874_209010892	0.0940089	HOXC9	ENST00000260988.4|CRYGB|ENSG00000182187.3|crystallin, gamma B
hg19_v2_chr2_-_69664586_69664760	0.0918645	HOXC9	ENST00000303698.3|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000394305.1|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000410022.2|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
hg19_v2_chr14_+_21359558_21359580	0.0912661	HOXC9	ENST00000304639.3|RNASE3|ENSG00000169397.3|ribonuclease, RNase A family, 3
hg19_v2_chr4_+_70916119_70916167	0.0911543	HOXC9	ENST00000246896.3|HTN1|ENSG00000126550.4|histatin 1 	ENST00000511674.1|HTN1|ENSG00000126550.4|histatin 1
hg19_v2_chr17_+_68071458_68071481	0.0904849	HOXC9	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr8_+_24241969_24241999	0.0892018	HOXC9	ENST00000522298.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr10_+_74927875_74927924	0.0886587	HOXC9	ENST00000242505.6|FAM149B1|ENSG00000138286.10|family with sequence similarity 149, member B1
hg19_v2_chr2_-_224467093_224467221	0.0870363	HOXC9	ENST00000305409.2|SCG2|ENSG00000171951.4|secretogranin II
hg19_v2_chr22_-_32767017_32767063	0.083798	HOXC9	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr20_-_23860373_23860397	0.0828838	HOXC9	ENST00000304710.4|CST5|ENSG00000170367.4|cystatin D
hg19_v2_chr1_-_19426149_19426221	0.0809735	HOXC9	ENST00000429347.2|UBR4|ENSG00000127481.10|ubiquitin protein ligase E3 component n-recognin 4
hg19_v2_chr4_+_155484155_155484178	0.0794123	HOXC9	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr4_+_123844225_123844277	0.0791868	HOXC9	ENST00000274008.4|SPATA5|ENSG00000145375.7|spermatogenesis associated 5
hg19_v2_chr16_-_66583701_66583783	0.0750591	HOXC9	ENST00000527800.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000525974.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000563369.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr16_+_25228242_25228273	0.073405	HOXC9	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr4_-_103749205_103749228	0.073381	HOXC9	ENST00000508249.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr16_+_72090053_72090060	0.0693239	HOXC9	ENST00000576168.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000567185.3|HP|ENSG00000257017.4|haptoglobin 	ENST00000567612.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr8_+_24241789_24241802	0.0682671	HOXC9	ENST00000256412.4|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1 	ENST00000538205.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr1_+_22962948_22962999	0.0667322	HOXC9	ENST00000374642.3|C1QA|ENSG00000173372.12|complement component 1, q subcomponent, A chain
hg19_v2_chr12_+_20963647_20963666	0.0666035	HOXC9	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr19_+_16940198_16940237	0.0643279	HOXC9	ENST00000248054.5|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000596802.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B 	ENST00000379803.1|SIN3B|ENSG00000127511.5|SIN3 transcription regulator family member B
hg19_v2_chr22_-_32766972_32766996	0.0615288	HOXC9	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr1_+_26798955_26799010	0.0595408	HOXC9	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr5_+_175288631_175288690	0.0566307	HOXC9	ENST00000509837.1|CPLX2|ENSG00000145920.10|complexin 2
hg19_v2_chrX_+_65382433_65382486	0.0539197	HOXC9	ENST00000374727.3|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr17_-_66951474_66951550	0.0513029	HOXC9	ENST00000269080.2|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chrX_-_68385274_68385350	0.0504759	HOXC9	ENST00000374584.3|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase 	ENST00000590146.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr19_+_55014085_55014123	0.0502893	HOXC9	ENST00000351841.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr12_+_20963632_20963645	0.048171	HOXC9	ENST00000540853.1|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3 	ENST00000261196.2|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr4_-_103749105_103749177	0.0477413	HOXC9	ENST00000394801.4|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000394804.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chrX_-_68385354_68385369	0.0476606	HOXC9	ENST00000361478.1|PJA1|ENSG00000181191.11|praja ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr9_-_21187598_21187598	0.04723	HOXC9	ENST00000421715.1|IFNA4|ENSG00000236637.1|interferon, alpha 4
hg19_v2_chr14_+_53173890_53173907	0.0468626	HOXC9	ENST00000445930.2|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr20_-_48782639_48782743	0.0464189	HOXC9	ENST00000435301.2|RP11-112L6.3|ENSG00000237595.2|RP11-112L6.3
hg19_v2_chr19_-_54850417_54850439	0.0445911	HOXC9	ENST00000291759.4|LILRA4|ENSG00000239961.2|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
hg19_v2_chr8_+_132916318_132916401	0.0434642	HOXC9	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr14_+_53173910_53173940	0.0413936	HOXC9	ENST00000606149.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000555339.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000556813.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr16_+_56485402_56485490	0.0407878	HOXC9	ENST00000566157.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000562150.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000561646.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000568397.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg19_v2_chr1_-_197115818_197115829	0.0404984	HOXC9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr19_+_55014013_55014052	0.0398508	HOXC9	ENST00000301202.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr12_-_10959892_10959892	0.039207	HOXC9	ENST00000240615.2|TAS2R8|ENSG00000121314.2|taste receptor, type 2, member 8
hg19_v2_chr4_-_103749179_103749195	0.037804	HOXC9	ENST00000502690.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr4_-_103749313_103749331	0.0377739	HOXC9	ENST00000394803.5|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr4_+_71248795_71248854	0.0369304	HOXC9	ENST00000304915.3|SMR3B|ENSG00000171201.6|submaxillary gland androgen regulated protein 3B
hg19_v2_chr8_-_30670384_30670394	0.0363754	HOXC9	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr9_+_131062367_131062367	0.0361409	HOXC9	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr1_-_226926864_226927038	0.0361406	HOXC9	ENST00000429204.1|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B 	ENST00000366784.1|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B
hg19_v2_chr8_-_110986918_110986959	0.0360644	HOXC9	ENST00000297404.1|KCNV1|ENSG00000164794.4|potassium channel, subfamily V, member 1
hg19_v2_chr2_+_27719697_27719723	0.035179	HOXC9	ENST00000264717.2|GCKR|ENSG00000084734.4|glucokinase (hexokinase 4) regulator 	ENST00000424318.2|GCKR|ENSG00000084734.4|glucokinase (hexokinase 4) regulator
hg19_v2_chr7_-_36764004_36764059	0.0350674	HOXC9	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr6_-_146057144_146057164	0.0341909	HOXC9	ENST00000367519.3|EPM2A|ENSG00000112425.9|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
hg19_v2_chr17_+_33914276_33914386	0.0331055	HOXC9	ENST00000592545.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000538556.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000312678.8|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000589344.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr5_-_148033693_148033716	0.031817	HOXC9	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr17_+_67498538_67498570	0.031349	HOXC9	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr17_+_48823975_48824003	0.0301235	HOXC9	ENST00000513969.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000503728.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr3_+_69812701_69812729	0.0290037	HOXC9	ENST00000472437.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr5_+_156696362_156696374	0.0282994	HOXC9	ENST00000377576.3|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr1_+_16370271_16370303	0.0276133	HOXC9	ENST00000375679.4|CLCNKB|ENSG00000184908.13|chloride channel, voltage-sensitive Kb
hg19_v2_chr3_+_125687987_125688057	0.0269765	HOXC9	ENST00000514116.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000251776.4|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000504401.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000513830.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000508088.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr1_+_16348366_16348486	0.0266545	HOXC9	ENST00000375692.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka 	ENST00000420078.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka
hg19_v2_chr3_+_112709804_112709850	0.0252473	HOXC9	ENST00000383677.3|GTPBP8|ENSG00000163607.10|GTP-binding protein 8 (putative)
hg19_v2_chr17_+_45286706_45286766	0.0252389	HOXC9	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr16_+_28505955_28506001	0.0245844	HOXC9	ENST00000564831.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000328423.5|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000431282.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor
hg19_v2_chr1_+_16348497_16348509	0.0243337	HOXC9	ENST00000439316.2|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka
hg19_v2_chr3_-_38992052_38992052	0.0238455	HOXC9	ENST00000302328.3|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000450244.1|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000444237.2|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v2_chr12_-_10605929_10605982	0.0237804	HOXC9	ENST00000347831.5|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1 	ENST00000359151.3|KLRC1|ENSG00000134545.9|killer cell lectin-like receptor subfamily C, member 1
hg19_v2_chr4_-_103748880_103749047	0.0227486	HOXC9	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr8_-_62602327_62602408	0.0220101	HOXC9	ENST00000445642.3|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517847.2|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000389204.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517661.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517903.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522603.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522349.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522835.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000541428.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518306.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr13_+_21714711_21714754	0.0217786	HOXC9	ENST00000607003.1|SAP18|ENSG00000150459.8|Sin3A-associated protein, 18kDa 	ENST00000492245.1|SAP18|ENSG00000150459.8|Sin3A-associated protein, 18kDa
hg19_v2_chr2_+_70121075_70121102	0.0217778	HOXC9	ENST00000409116.1|SNRNP27|ENSG00000124380.6|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
hg19_v2_chr15_-_41836441_41836475	0.0213425	HOXC9	ENST00000567866.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000561603.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000304330.4|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000566863.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1
hg19_v2_chrX_-_73512177_73512213	0.0203629	HOXC9	ENST00000603672.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000418855.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr4_+_70894130_70894188	0.0188708	HOXC9	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chrX_+_140982452_140982452	0.0188315	HOXC9	ENST00000544766.1|MAGEC3|ENSG00000165509.9|melanoma antigen family C, 3
hg19_v2_chr4_+_155484103_155484147	0.0186978	HOXC9	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr2_+_233390890_233390903	0.0177234	HOXC9	ENST00000258385.3|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000536614.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000457943.2|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr11_-_128894053_128894123	0.0176467	HOXC9	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr12_-_124118296_124118313	0.0162691	HOXC9	ENST00000424014.2|EIF2B1|ENSG00000111361.8|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa 	ENST00000537073.1|EIF2B1|ENSG00000111361.8|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa
hg19_v2_chr14_+_72399833_72399952	0.0158233	HOXC9	ENST00000553530.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6 	ENST00000556437.1|RGS6|ENSG00000182732.12|regulator of G-protein signaling 6
hg19_v2_chr12_-_11091862_11091862	0.0157753	HOXC9	ENST00000537503.1|TAS2R14|ENSG00000212127.5|taste receptor, type 2, member 14
hg19_v2_chr2_+_106468204_106468312	0.015528	HOXC9	ENST00000425756.1|NCK2|ENSG00000071051.9|NCK adaptor protein 2 	ENST00000393349.2|NCK2|ENSG00000071051.9|NCK adaptor protein 2
hg19_v2_chr20_+_56964169_56964182	0.0154138	HOXC9	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr12_+_58176525_58176601	0.0144827	HOXC9	ENST00000543727.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000540550.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000323833.8|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000350762.5|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000550559.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000548851.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000434359.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000457189.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial
hg19_v2_chr6_-_22297730_22297730	0.013968	HOXC9	ENST00000306482.1|PRL|ENSG00000172179.7|prolactin
hg19_v2_chr11_-_114466471_114466474	0.0135597	HOXC9	ENST00000424261.2|NXPE4|ENSG00000137634.5|neurexophilin and PC-esterase domain family, member 4
hg19_v2_chr17_+_7348658_7348866	0.0131439	HOXC9	ENST00000570557.1|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle) 	ENST00000536404.2|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle) 	ENST00000576360.1|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle)
hg19_v2_chr9_-_15472730_15472753	0.0125147	HOXC9	ENST00000481862.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chrX_-_73512411_73512444	0.0114348	HOXC9	ENST00000602576.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000429124.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr2_-_208031943_208031991	0.0114234	HOXC9	ENST00000421199.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous) 	ENST00000457962.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr22_+_22676808_22676828	0.0109895	HOXC9	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr7_+_100551239_100551256	0.0103913	HOXC9	ENST00000319509.7|MUC3A|ENSG00000169894.13|mucin 3A, cell surface associated
hg19_v2_chr10_-_71169031_71169044	0.0102583	HOXC9	ENST00000373307.1|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr5_-_135290705_135290723	0.00953264	HOXC9	ENST00000274507.1|LECT2|ENSG00000145826.4|leukocyte cell-derived chemotaxin 2
hg19_v2_chr2_+_133174147_133174235	0.00784581	HOXC9	ENST00000329321.3|GPR39|ENSG00000183840.5|G protein-coupled receptor 39
hg19_v2_chr9_+_103947311_103947326	0.00599328	HOXC9	ENST00000395056.2|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr9_+_82187630_82187722	0.00552597	HOXC9	ENST00000265284.6|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr8_-_16050142_16050168	0.00439631	HOXC9	ENST00000536385.1|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1 	ENST00000381998.4|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chrX_+_65384052_65384112	0.00360666	HOXC9	ENST00000336279.5|HEPH|ENSG00000089472.12|hephaestin 	ENST00000458621.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr9_+_77112244_77112281	0.00335119	HOXC9	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr4_-_69215467_69215532	0.00259476	HOXC9	ENST00000579690.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chrX_+_144908928_144908928	0.00253924	HOXC9	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr4_-_70826725_70826725	0.00194105	HOXC9	ENST00000353151.3|CSN2|ENSG00000135222.6|casein beta
hg19_v2_chr10_+_5238793_5238807	0.00143989	HOXC9	ENST00000263126.1|AKR1C4|ENSG00000198610.6|aldo-keto reductase family 1, member C4
hg19_v2_chr10_-_127505167_127505201	0.000197812	HOXC9	ENST00000368786.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
