hg19_v2_chr3_+_158787041_158787074	2.89282	HOXD4	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr4_-_143226979_143226990	2.24674	HOXD4	ENST00000514525.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr18_-_21891460_21891506	2.23925	HOXD4	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr3_-_149095652_149095652	2.19646	HOXD4	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr4_+_169753156_169753192	2.1248	HOXD4	ENST00000393726.3|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein 	ENST00000507735.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr9_+_470288_470336	2.02999	HOXD4	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr4_+_169418195_169418217	1.98186	HOXD4	ENST00000261509.6|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein 	ENST00000335742.7|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr4_-_143227088_143227105	1.65652	HOXD4	ENST00000511838.1|INPP4B|ENSG00000109452.8|inositol polyphosphate-4-phosphatase, type II, 105kDa
hg19_v2_chr11_+_101983176_101983245	1.59262	HOXD4	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr13_+_73629107_73629148	1.37409	HOXD4	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr18_+_29027696_29027774	1.31409	HOXD4	ENST00000257189.4|DSG3|ENSG00000134757.4|desmoglein 3
hg19_v2_chr4_+_169418255_169418278	1.16554	HOXD4	ENST00000505667.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein 	ENST00000511948.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr1_+_186798073_186798147	1.16076	HOXD4	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chrX_-_13835147_13835224	1.09233	HOXD4	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr7_+_16793160_16793160	1.08627	HOXD4	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chrX_-_10645773_10645795	1.06326	HOXD4	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr8_-_18871159_18871201	1.00594	HOXD4	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr1_+_144146808_144146812	0.924781	HOXD4	ENST00000369190.5|NBPF8|ENSG00000162825.12|neuroblastoma breakpoint family, member 8 	ENST00000412624.2|NBPF8|ENSG00000162825.12|neuroblastoma breakpoint family, member 8 	ENST00000369365.3|NBPF8|ENSG00000162825.12|neuroblastoma breakpoint family, member 8
hg19_v2_chr2_-_165424973_165425010	0.897584	HOXD4	ENST00000543549.1|GRB14|ENSG00000115290.5|growth factor receptor-bound protein 14
hg19_v2_chr11_+_12766583_12766592	0.876138	HOXD4	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr6_+_53659746_53659817	0.870624	HOXD4	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr2_-_31361543_31361592	0.857153	HOXD4	ENST00000349752.5|GALNT14|ENSG00000158089.10|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v2_chr3_-_149293990_149294039	0.79624	HOXD4	ENST00000472417.1|WWTR1|ENSG00000018408.10|WW domain containing transcription regulator 1
hg19_v2_chr3_-_126327398_126327398	0.612767	HOXD4	ENST00000383572.2|TXNRD3NB|ENSG00000206483.4|thioredoxin reductase 3 neighbor
hg19_v2_chr17_-_10452929_10452946	0.594262	HOXD4	ENST00000532183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000397183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000420805.1|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult
hg19_v2_chr12_-_91505608_91505608	0.548761	HOXD4	ENST00000266718.4|LUM|ENSG00000139329.4|lumican
hg19_v2_chr21_-_27423339_27423352	0.525251	HOXD4	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr3_-_18480260_18480269	0.511413	HOXD4	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr15_-_56209306_56209344	0.493705	HOXD4	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr5_+_140743859_140743898	0.48815	HOXD4	ENST00000518069.1|PCDHGA5|ENSG00000253485.1|protocadherin gamma subfamily A, 5
hg19_v2_chr1_+_84630645_84630652	0.476166	HOXD4	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr17_-_64225508_64225539	0.460558	HOXD4	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr2_+_109237717_109237729	0.451505	HOXD4	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr14_+_90863327_90863356	0.447706	HOXD4	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr11_-_89224508_89224563	0.444901	HOXD4	ENST00000525196.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr18_-_61311485_61311532	0.396541	HOXD4	ENST00000436264.1|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4 	ENST00000356424.6|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4 	ENST00000341074.5|SERPINB4|ENSG00000206073.6|serpin peptidase inhibitor, clade B (ovalbumin), member 4
hg19_v2_chr2_-_190927447_190927466	0.393033	HOXD4	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr5_+_140762268_140762467	0.390769	HOXD4	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr11_-_89224638_89224653	0.374668	HOXD4	ENST00000535633.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000263317.4|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr4_+_155484155_155484178	0.366149	HOXD4	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr2_+_234590556_234590584	0.36207	HOXD4	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr4_+_70796784_70796799	0.35942	HOXD4	ENST00000246891.4|CSN1S1|ENSG00000126545.9|casein alpha s1 	ENST00000444405.3|CSN1S1|ENSG00000126545.9|casein alpha s1
hg19_v2_chr11_-_89224139_89224162	0.35232	HOXD4	ENST00000413594.2|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr4_+_155484103_155484147	0.336941	HOXD4	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr11_-_89223883_89223904	0.335271	HOXD4	ENST00000528341.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr8_-_27941380_27941403	0.334488	HOXD4	ENST00000413272.2|NUGGC|ENSG00000189233.7|nuclear GTPase, germinal center associated 	ENST00000341513.6|NUGGC|ENSG00000189233.7|nuclear GTPase, germinal center associated
hg19_v2_chr7_-_137028534_137028611	0.332678	HOXD4	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr2_-_160473114_160473203	0.327831	HOXD4	ENST00000392783.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr11_-_89224299_89224466	0.320653	HOXD4	ENST00000343727.5|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000531342.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000375979.3|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr11_-_89224488_89224507	0.319024	HOXD4	ENST00000534731.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000527626.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr5_-_179499086_179499105	0.311946	HOXD4	ENST00000261947.4|RNF130|ENSG00000113269.9|ring finger protein 130
hg19_v2_chr12_+_26348246_26348310	0.311414	HOXD4	ENST00000422622.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr5_-_179499108_179499147	0.304782	HOXD4	ENST00000521389.1|RNF130|ENSG00000113269.9|ring finger protein 130
hg19_v2_chrX_-_92928557_92928613	0.299238	HOXD4	ENST00000373079.3|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3 	ENST00000475430.2|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3
hg19_v2_chr19_+_50016610_50016658	0.298623	HOXD4	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr6_+_142468361_142468382	0.294982	HOXD4	ENST00000367630.4|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr17_+_66521936_66522026	0.288273	HOXD4	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr12_+_16109519_16109568	0.27883	HOXD4	ENST00000526530.1|DERA|ENSG00000023697.8|deoxyribose-phosphate aldolase (putative)
hg19_v2_chr1_-_235814048_235814067	0.269494	HOXD4	ENST00000450593.1|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4 	ENST00000366598.4|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4
hg19_v2_chr5_+_66300446_66300463	0.268575	HOXD4	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr15_-_65809991_65810037	0.265239	HOXD4	ENST00000559526.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000358939.4|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000560665.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000321118.7|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000339244.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000300141.6|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr3_-_124774802_124774852	0.233324	HOXD4	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr2_+_204571375_204571432	0.232088	HOXD4	ENST00000374478.4|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr17_-_73844722_73844751	0.228608	HOXD4	ENST00000586257.1|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr6_-_87804815_87804830	0.226745	HOXD4	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chr6_-_36515177_36515270	0.223395	HOXD4	ENST00000229812.7|STK38|ENSG00000112079.8|serine/threonine kinase 38
hg19_v2_chr7_-_137028498_137028520	0.203883	HOXD4	ENST00000393083.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr5_-_137475071_137475122	0.198546	HOXD4	ENST00000265191.2|NME5|ENSG00000112981.3|NME/NM23 family member 5
hg19_v2_chr2_+_234826016_234826050	0.191698	HOXD4	ENST00000324695.4|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8 	ENST00000433712.2|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8
hg19_v2_chr3_+_197518100_197518150	0.190954	HOXD4	ENST00000438796.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000414675.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000441090.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000334859.4|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3 	ENST00000425562.2|LRCH3|ENSG00000186001.8|leucine-rich repeats and calponin homology (CH) domain containing 3
hg19_v2_chr5_+_101569696_101569696	0.184484	HOXD4	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr2_-_183291741_183291771	0.175527	HOXD4	ENST00000351439.5|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000409365.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr19_-_5903714_5903809	0.168181	HOXD4	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chr16_-_21663919_21663936	0.167174	HOXD4	ENST00000569602.1|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr3_-_11623804_11623865	0.163824	HOXD4	ENST00000451674.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr1_-_101360331_101360373	0.162588	HOXD4	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr18_+_22040620_22040693	0.15285	HOXD4	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr10_+_95848824_95848852	0.152581	HOXD4	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr1_-_151762943_151763012	0.145424	HOXD4	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr14_-_99947168_99947232	0.136842	HOXD4	ENST00000331768.5|SETD3|ENSG00000183576.8|SET domain containing 3
hg19_v2_chr2_-_207024233_207024327	0.13422	HOXD4	ENST00000423725.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000233190.6|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v2_chr11_-_64684672_64684722	0.123287	HOXD4	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr2_-_99279928_99279942	0.119069	HOXD4	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr1_-_87379785_87379830	0.118311	HOXD4	ENST00000401030.3|SEP15|ENSG00000183291.11|Homo sapiens 15 kDa selenoprotein (SEP15), transcript variant 2, mRNA. 	ENST00000370554.1|SEP15|ENSG00000183291.11|Homo sapiens 15 kDa selenoprotein (SEP15), transcript variant 2, mRNA.
hg19_v2_chr2_+_207024306_207024392	0.112061	HOXD4	ENST00000236957.5|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000392221.1|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000392222.2|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000445505.1|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2
hg19_v2_chr18_+_22040593_22040616	0.108183	HOXD4	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr1_+_149754227_149754246	0.0988252	HOXD4	ENST00000444948.1|FCGR1A|ENSG00000150337.9|Fc fragment of IgG, high affinity Ia, receptor (CD64) 	ENST00000369168.4|FCGR1A|ENSG00000150337.9|Fc fragment of IgG, high affinity Ia, receptor (CD64)
hg19_v2_chrX_+_37850026_37850070	0.0920397	HOXD4	ENST00000341016.3|CXorf27|ENSG00000187516.5|chromosome X open reading frame 27
hg19_v2_chr17_-_29624343_29624429	0.0901349	HOXD4	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr2_+_171034646_171034706	0.0897031	HOXD4	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr18_-_51750948_51751059	0.0851689	HOXD4	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr5_-_55412774_55412784	0.0794847	HOXD4	ENST00000434982.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr2_-_166060571_166060582	0.0788007	HOXD4	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr18_-_19994830_19994830	0.0709797	HOXD4	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr3_+_142342228_142342236	0.0682306	HOXD4	ENST00000337777.3|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr2_+_88047606_88047606	0.0636918	HOXD4	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr14_-_101036119_101036131	0.0616114	HOXD4	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr6_-_136847099_136847124	0.0563891	HOXD4	ENST00000438100.2|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr1_-_36948879_36948879	0.0557569	HOXD4	ENST00000373106.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000373104.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000373103.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte)
hg19_v2_chr3_-_195310802_195310818	0.0531454	HOXD4	ENST00000421243.1|APOD|ENSG00000189058.4|apolipoprotein D 	ENST00000453131.1|APOD|ENSG00000189058.4|apolipoprotein D
hg19_v2_chr15_-_88799661_88799755	0.0488098	HOXD4	ENST00000360948.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000357724.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000355254.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3 	ENST00000317501.3|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3
hg19_v2_chr8_-_72274467_72274490	0.045534	HOXD4	ENST00000340726.3|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr5_+_179921344_179921423	0.0445054	HOXD4	ENST00000261951.4|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr2_-_166060552_166060566	0.039311	HOXD4	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr3_-_170744498_170744542	0.0372303	HOXD4	ENST00000382808.4|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2 	ENST00000314251.3|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v2_chr14_-_24911971_24912015	0.0370806	HOXD4	ENST00000555365.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000399395.3|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr20_+_18447771_18447771	0.0365988	HOXD4	ENST00000377603.4|POLR3F|ENSG00000132664.7|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
hg19_v2_chr14_+_23067146_23067160	0.0364627	HOXD4	ENST00000428304.2|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr17_+_3118915_3118915	0.0282482	HOXD4	ENST00000304094.1|OR1A1|ENSG00000172146.1|olfactory receptor, family 1, subfamily A, member 1
hg19_v2_chr4_-_46996424_46996424	0.025391	HOXD4	ENST00000264318.3|GABRA4|ENSG00000109158.6|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v2_chr15_+_80364901_80364932	0.0251615	HOXD4	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr17_+_41132564_41132600	0.0246983	HOXD4	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr2_-_160472952_160473080	0.0243764	HOXD4	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr14_-_64761078_64761128	0.0243107	HOXD4	ENST00000341099.4|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000556275.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000542956.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000353772.3|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000357782.2|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000267525.6|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta)
hg19_v2_chr14_-_24911868_24911902	0.0233937	HOXD4	ENST00000554698.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr16_-_21663950_21663981	0.0178786	HOXD4	ENST00000268389.4|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr2_-_228497888_228498036	0.0175795	HOXD4	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chr12_-_91451758_91451763	0.0138657	HOXD4	ENST00000266719.3|KERA|ENSG00000139330.5|keratocan
hg19_v2_chr1_-_120935894_120935950	0.0137227	HOXD4	ENST00000369383.4|FCGR1B|ENSG00000198019.8|Fc fragment of IgG, high affinity Ib, receptor (CD64) 	ENST00000369384.4|FCGR1B|ENSG00000198019.8|Fc fragment of IgG, high affinity Ib, receptor (CD64)
hg19_v2_chr19_+_48828582_48828637	0.0125764	HOXD4	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr15_-_50558223_50558263	0.00549421	HOXD4	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr10_-_17171817_17171830	0.00486165	HOXD4	ENST00000377833.4|CUBN|ENSG00000107611.10|cubilin (intrinsic factor-cobalamin receptor)
hg19_v2_chr11_-_77790865_77790934	0.00218824	HOXD4	ENST00000534029.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000525085.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000527806.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000528251.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough 	ENST00000528164.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000530054.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough
hg19_v2_chr12_+_9980113_9980133	0.00124378	HOXD4	ENST00000537723.1|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr8_+_24151620_24151647	0.00113544	HOXD4	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr11_-_104972158_104972190	0.001078	HOXD4	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
