hg19_v2_chr4_+_74301880_74301964	2.47291	LHX3	ENST00000395792.2|AFP|ENSG00000081051.3|alpha-fetoprotein 	ENST00000226359.2|AFP|ENSG00000081051.3|alpha-fetoprotein
hg19_v2_chr17_-_39093672_39093738	2.33369	LHX3	ENST00000209718.3|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible) 	ENST00000436344.3|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible) 	ENST00000485751.1|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible)
hg19_v2_chr17_-_64225508_64225539	1.98094	LHX3	ENST00000205948.6|APOH|ENSG00000091583.6|apolipoprotein H (beta-2-glycoprotein I)
hg19_v2_chr4_-_41884620_41884663	1.86487	LHX3	ENST00000504870.1|LINC00682|ENSG00000245870.2|long intergenic non-protein coding RNA 682
hg19_v2_chr16_-_28634874_28634907	1.82517	LHX3	ENST00000395609.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 	ENST00000350842.4|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr1_-_150208320_150208338	1.78002	LHX3	ENST00000534220.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr4_+_155484155_155484178	1.76108	LHX3	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr5_-_78809950_78810040	1.70527	LHX3	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr7_-_87342564_87342617	1.69446	LHX3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr16_+_15489603_15489627	1.45635	LHX3	ENST00000568766.1|RP11-1021N1.1|ENSG00000261130.1|Uncharacterized protein  	ENST00000287594.7|MPV17L|ENSG00000156968.8|MPV17 mitochondrial membrane protein-like
hg19_v2_chrX_-_55057403_55057497	1.4537	LHX3	ENST00000396198.3|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000335854.4|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000455688.1|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000330807.5|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2
hg19_v2_chr11_+_59824060_59824106	1.43655	LHX3	ENST00000395032.2|MS4A3|ENSG00000149516.9|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) 	ENST00000358152.2|MS4A3|ENSG00000149516.9|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v2_chr17_+_1674982_1675041	1.38634	LHX3	ENST00000572048.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 	ENST00000573763.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
hg19_v2_chr11_+_59824127_59824161	1.37333	LHX3	ENST00000278865.3|MS4A3|ENSG00000149516.9|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v2_chr5_-_1882858_1883003	1.31641	LHX3	ENST00000511126.1|IRX4|ENSG00000113430.5|iroquois homeobox 4 	ENST00000231357.2|IRX4|ENSG00000113430.5|iroquois homeobox 4
hg19_v2_chr4_+_155484103_155484147	1.25632	LHX3	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr1_-_24126023_24126049	1.15268	LHX3	ENST00000429356.1|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase
hg19_v2_chr6_+_26104104_26104169	1.1521	LHX3	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr1_-_150208291_150208309	1.14339	LHX3	ENST00000533654.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr14_-_21566731_21566836	1.14271	LHX3	ENST00000360947.3|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr4_-_23891693_23891706	1.10123	LHX3	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr2_-_166930131_166930149	1.09466	LHX3	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr14_+_39583427_39583542	0.927024	LHX3	ENST00000308317.6|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000396249.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000250379.8|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000534684.2|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2 	ENST00000527381.1|GEMIN2|ENSG00000092208.12|gem (nuclear organelle) associated protein 2
hg19_v2_chr12_+_49740700_49740821	0.856301	LHX3	ENST00000549441.2|DNAJC22|ENSG00000178401.10|DnaJ (Hsp40) homolog, subfamily C, member 22 	ENST00000395069.3|DNAJC22|ENSG00000178401.10|DnaJ (Hsp40) homolog, subfamily C, member 22
hg19_v2_chr1_-_150208363_150208386	0.851943	LHX3	ENST00000436748.2|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr12_-_10282742_10282817	0.847839	LHX3	ENST00000298523.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000396484.2|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000310002.4|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr3_+_157827841_157827916	0.835907	LHX3	ENST00000295930.3|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000471994.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000464171.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000312179.6|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000475278.2|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1
hg19_v2_chr4_-_185275104_185275133	0.831194	LHX3	ENST00000317596.3|RP11-290F5.2|ENSG00000180712.3|RP11-290F5.2
hg19_v2_chr3_+_63953415_63953430	0.80138	LHX3	ENST00000484332.1|ATXN7|ENSG00000163635.13|ataxin 7
hg19_v2_chr15_+_65843130_65843157	0.788305	LHX3	ENST00000569894.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chrX_-_110655306_110655330	0.779955	LHX3	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr17_-_27418537_27418537	0.760403	LHX3	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr3_-_141747950_141748004	0.750367	LHX3	ENST00000497579.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chrX_+_9431324_9431371	0.712416	LHX3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr16_+_28565230_28565257	0.706267	LHX3	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr17_-_60142609_60142657	0.699594	LHX3	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr3_-_47517302_47517451	0.678828	LHX3	ENST00000441517.2|SCAP|ENSG00000114650.14|SREBF chaperone 	ENST00000545718.1|SCAP|ENSG00000114650.14|SREBF chaperone
hg19_v2_chr12_+_64798095_64798162	0.669471	LHX3	ENST00000332707.5|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr4_+_41937131_41937211	0.639194	LHX3	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr14_-_21567009_21567173	0.638792	LHX3	ENST00000556174.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000554478.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000553980.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000421093.2|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr7_-_140482926_140482957	0.624081	LHX3	ENST00000496384.2|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chr5_+_59783540_59783584	0.60714	LHX3	ENST00000515734.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr3_-_141719195_141719215	0.599677	LHX3	ENST00000397991.4|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr4_+_158142750_158142836	0.571142	LHX3	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr2_-_99279928_99279942	0.57069	LHX3	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr17_-_72772462_72772511	0.570587	LHX3	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr1_-_92952433_92952489	0.554669	LHX3	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr2_+_234826016_234826050	0.553892	LHX3	ENST00000324695.4|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8 	ENST00000433712.2|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8
hg19_v2_chr19_+_48949030_48949086	0.532352	LHX3	ENST00000253237.5|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chr11_-_128894053_128894123	0.529674	LHX3	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr3_+_69812877_69812962	0.514378	LHX3	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chrX_+_107288197_107288212	0.495912	LHX3	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr1_-_150208412_150208467	0.494982	LHX3	ENST00000532744.1|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369114.5|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369115.2|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 	ENST00000369116.4|ANP32E|ENSG00000143401.10|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
hg19_v2_chr4_+_158141899_158141980	0.489421	LHX3	ENST00000264426.9|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000506284.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr16_+_89334512_89334512	0.489112	LHX3	ENST00000602042.1|AC137932.1|ENSG00000268218.1|AC137932.1
hg19_v2_chr18_+_72201829_72201845	0.486676	LHX3	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr12_-_53994805_53994817	0.478115	LHX3	ENST00000328463.7|ATF7|ENSG00000170653.14|activating transcription factor 7
hg19_v2_chr17_-_10372875_10372876	0.469674	LHX3	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chr8_-_57123815_57123867	0.444807	LHX3	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr9_-_100000957_100001043	0.417908	LHX3	ENST00000366109.2|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5	ENST00000607322.1|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5
hg19_v2_chr19_-_43969796_43969813	0.415742	LHX3	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr8_+_105352050_105352056	0.398848	LHX3	ENST00000297581.2|DCSTAMP|ENSG00000164935.2|dendrocyte expressed seven transmembrane protein
hg19_v2_chr12_-_10282836_10282863	0.37767	LHX3	ENST00000304084.8|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000353231.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000525605.1|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr5_+_59783941_59784066	0.375135	LHX3	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr12_+_4385230_4385295	0.365505	LHX3	ENST00000536537.1|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr10_-_115904361_115904375	0.350724	LHX3	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr19_-_49149553_49149602	0.34128	LHX3	ENST00000084798.4|CA11|ENSG00000063180.4|carbonic anhydrase XI
hg19_v2_chr5_-_39274617_39274636	0.332907	LHX3	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr7_+_39017504_39017598	0.324658	LHX3	ENST00000403058.1|POU6F2|ENSG00000106536.15|POU class 6 homeobox 2
hg19_v2_chr4_+_113568207_113568367	0.323512	LHX3	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr1_+_168250194_168250278	0.317253	LHX3	ENST00000367821.3|TBX19|ENSG00000143178.8|T-box 19
hg19_v2_chrX_+_24167746_24167811	0.312695	LHX3	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr4_+_158141843_158141895	0.298084	LHX3	ENST00000509417.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000296526.7|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr12_-_86650045_86650076	0.294163	LHX3	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr19_-_51920952_51921057	0.284087	LHX3	ENST00000356298.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000339313.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000529627.1|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000439889.2|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000353836.5|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10 	ENST00000432469.2|SIGLEC10|ENSG00000142512.10|sialic acid binding Ig-like lectin 10
hg19_v2_chr12_-_86650077_86650095	0.283823	LHX3	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr5_+_67586465_67586534	0.273554	LHX3	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chrX_+_107288239_107288259	0.270189	LHX3	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr14_-_36990354_36990397	0.264688	LHX3	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chrX_+_108779004_108779015	0.263443	LHX3	ENST00000218004.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr17_-_39623681_39623681	0.259187	LHX3	ENST00000225899.3|KRT32|ENSG00000108759.3|keratin 32
hg19_v2_chr12_-_52761262_52761267	0.243819	LHX3	ENST00000257901.3|KRT85|ENSG00000135443.4|keratin 85
hg19_v2_chrX_+_84258832_84258915	0.242357	LHX3	ENST00000373173.2|APOOL|ENSG00000155008.9|apolipoprotein O-like
hg19_v2_chr7_-_25268104_25268106	0.240633	LHX3	ENST00000222674.2|NPVF|ENSG00000105954.2|neuropeptide VF precursor
hg19_v2_chr7_+_97361388_97361405	0.234962	LHX3	ENST00000350485.4|TAC1|ENSG00000006128.7|tachykinin, precursor 1 	ENST00000346867.4|TAC1|ENSG00000006128.7|tachykinin, precursor 1
hg19_v2_chr17_-_8263538_8263538	0.229849	LHX3	ENST00000535173.1|AC135178.1|ENSG00000198150.2|HCG1985372; Uncharacterized protein; cDNA FLJ37541 fis, clone BRCAN2026340
hg19_v2_chr20_+_30063067_30063117	0.220036	LHX3	ENST00000201979.2|REM1|ENSG00000088320.3|RAS (RAD and GEM)-like GTP-binding 1
hg19_v2_chr14_-_101295407_101295537	0.213329	LHX3	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr3_+_138340049_138340056	0.195635	LHX3	ENST00000464668.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr1_-_160549235_160549306	0.179405	LHX3	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr8_-_25281747_25281779	0.1771	LHX3	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr9_-_128246769_128246780	0.172066	LHX3	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr2_-_228582709_228582754	0.157018	LHX3	ENST00000541617.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409456.2|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409287.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000258403.3|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3
hg19_v2_chr19_-_6279932_6280000	0.155536	LHX3	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr1_-_45988542_45988719	0.149836	LHX3	ENST00000424390.1|PRDX1|ENSG00000117450.9|peroxiredoxin 1
hg19_v2_chr19_+_49199209_49199284	0.146226	LHX3	ENST00000522966.1|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000425340.2|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000391876.4|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included)
hg19_v2_chr8_+_119294456_119294486	0.141845	LHX3	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr17_-_4938712_4938733	0.132729	LHX3	ENST00000254853.5|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1 	ENST00000424747.1|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1
hg19_v2_chr1_+_197237352_197237543	0.128187	LHX3	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr12_-_42631529_42631602	0.123741	LHX3	ENST00000548917.1|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chrX_+_24167828_24167907	0.109271	LHX3	ENST00000379188.3|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000419690.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000379177.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000304543.5|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr1_+_115572415_115572451	0.108884	LHX3	ENST00000256592.1|TSHB|ENSG00000134200.2|thyroid stimulating hormone, beta
hg19_v2_chr5_-_88119580_88119605	0.100906	LHX3	ENST00000539796.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr4_-_120243545_120243562	0.0976951	LHX3	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr6_+_72926145_72926245	0.0934314	LHX3	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr3_-_167191814_167191842	0.0900008	LHX3	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr14_+_29241910_29242013	0.075943	LHX3	ENST00000399387.4|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23 	ENST00000552957.1|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23 	ENST00000548213.1|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23
hg19_v2_chr15_+_75970672_75970672	0.073094	LHX3	ENST00000435356.1|AC105020.1|ENSG00000203392.2|Uncharacterized protein; cDNA FLJ12988 fis, clone NT2RP3000080
hg19_v2_chr13_-_70682590_70682601	0.0568692	LHX3	ENST00000377844.4|KLHL1|ENSG00000150361.7|kelch-like family member 1
hg19_v2_chr18_+_616672_616681	0.0551193	LHX3	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr5_+_140557371_140557371	0.0523937	LHX3	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr22_+_23487513_23487707	0.0461084	LHX3	ENST00000263116.2|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family 	ENST00000341989.4|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family
hg19_v2_chr3_+_138340067_138340080	0.0362552	LHX3	ENST00000479848.1|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr5_-_59783882_59783910	0.0269534	LHX3	ENST00000505507.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000502484.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr4_+_3344141_3344178	0.0209538	LHX3	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr11_+_5009424_5009424	0.00834912	LHX3	ENST00000300762.1|MMP26|ENSG00000167346.3|matrix metallopeptidase 26
