hg19_v2_chr2_+_8822113_8822196	1.22392	NKX1-1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr1_-_221915418_221915518	0.558644	NKX1-1	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr7_-_86849883_86849910	0.529119	NKX1-1	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr7_+_26331541_26331647	0.522853	NKX1-1	ENST00000416246.1|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000338523.4|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000412416.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr3_-_105588231_105588396	0.425316	NKX1-1	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr4_+_128554081_128554121	0.391992	NKX1-1	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr8_+_26371763_26371791	0.316066	NKX1-1	ENST00000521913.1|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr1_+_174843548_174843609	0.246862	NKX1-1	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr2_-_239197238_239197256	0.219532	NKX1-1	ENST00000254657.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr18_-_33709268_33709380	0.200501	NKX1-1	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr3_+_57261743_57261824	0.196232	NKX1-1	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr17_-_61777459_61777502	0.188778	NKX1-1	ENST00000578993.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000583211.1|LIMD2|ENSG00000136490.4|LIM domain containing 2 	ENST00000259006.3|LIMD2|ENSG00000136490.4|LIM domain containing 2
hg19_v2_chr2_-_239197201_239197212	0.183228	NKX1-1	ENST00000254658.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr14_-_24711865_24711880	0.173022	NKX1-1	ENST00000399423.4|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000267415.7|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr3_-_105587879_105587892	0.166242	NKX1-1	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr14_-_24711806_24711861	0.162965	NKX1-1	ENST00000540705.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000538777.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558566.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000559019.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr17_-_8113886_8113916	0.161284	NKX1-1	ENST00000577833.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000534871.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000583915.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000316199.6|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000581511.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000585124.1|AURKB|ENSG00000178999.8|aurora kinase B
hg19_v2_chr12_-_6961050_6961230	0.15315	NKX1-1	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr12_+_7014126_7014192	0.149177	NKX1-1	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr12_+_7014064_7014075	0.129714	NKX1-1	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr17_-_45266542_45266683	0.127019	NKX1-1	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr8_+_98656693_98656774	0.126077	NKX1-1	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr7_+_50348268_50348366	0.12556	NKX1-1	ENST00000438033.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000439701.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr12_+_7013897_7014045	0.116436	NKX1-1	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr8_+_98656336_98656535	0.109326	NKX1-1	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr15_-_78526855_78526916	0.105826	NKX1-1	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr3_+_23851928_23851951	0.0974717	NKX1-1	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr1_+_46972668_46972669	0.0949956	NKX1-1	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr17_-_44657017_44657088	0.084935	NKX1-1	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr17_-_44439084_44439130	0.082494	NKX1-1	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr14_-_24711470_24711494	0.0808195	NKX1-1	ENST00000559969.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr11_-_111741994_111742058	0.0717914	NKX1-1	ENST00000398006.2|ALG9|ENSG00000086848.10|ALG9, alpha-1,2-mannosyltransferase
hg19_v2_chr11_-_71823715_71823792	0.0694743	NKX1-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr11_-_62494821_62494953	0.0694061	NKX1-1	ENST00000301785.5|HNRNPUL2|ENSG00000214753.2|heterogeneous nuclear ribonucleoprotein U-like 2
hg19_v2_chr11_-_71823796_71823826	0.065635	NKX1-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr1_-_51796226_51796260	0.0642051	NKX1-1	ENST00000451380.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A 	ENST00000371747.3|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A 	ENST00000439482.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr1_-_108507631_108507809	0.0641177	NKX1-1	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr19_-_6424783_6424805	0.0613382	NKX1-1	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr12_+_102513950_102513996	0.0573655	NKX1-1	ENST00000378128.3|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000327680.2|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000541394.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000543784.1|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr19_+_36249057_36249102	0.0570586	NKX1-1	ENST00000301165.5|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000536950.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000537459.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000421853.2|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55
hg19_v2_chr4_-_103682145_103682157	0.0551265	NKX1-1	ENST00000226578.4|MANBA|ENSG00000109323.4|mannosidase, beta A, lysosomal
hg19_v2_chr4_-_8873531_8873543	0.0547911	NKX1-1	ENST00000400677.3|HMX1|ENSG00000215612.5|H6 family homeobox 1
hg19_v2_chr14_+_32798462_32798539	0.0528862	NKX1-1	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr1_+_62439037_62439047	0.0498164	NKX1-1	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr9_+_139780942_139780977	0.0491275	NKX1-1	ENST00000247668.2|TRAF2|ENSG00000127191.13|TNF receptor-associated factor 2 	ENST00000359662.3|TRAF2|ENSG00000127191.13|TNF receptor-associated factor 2
hg19_v2_chr19_+_45504688_45504782	0.0468718	NKX1-1	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr2_+_187371440_187371567	0.0444876	NKX1-1	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr17_-_8055747_8055758	0.0431709	NKX1-1	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr17_-_27418537_27418537	0.043005	NKX1-1	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr1_-_51796987_51797018	0.0425342	NKX1-1	ENST00000262676.5|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr10_-_1095050_1095110	0.0344441	NKX1-1	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr22_-_39151463_39151639	0.0340123	NKX1-1	ENST00000405510.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000433561.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2
hg19_v2_chr12_-_23737534_23737550	0.0326515	NKX1-1	ENST00000396007.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr12_+_2921788_2921872	0.0289379	NKX1-1	ENST00000228799.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000419778.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000542548.1|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2
hg19_v2_chr6_-_82957433_82957477	0.0278676	NKX1-1	ENST00000306270.7|IBTK|ENSG00000005700.10|inhibitor of Bruton agammaglobulinemia tyrosine kinase
hg19_v2_chr10_+_120789223_120789231	0.027534	NKX1-1	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr12_-_91451758_91451763	0.0265273	NKX1-1	ENST00000266719.3|KERA|ENSG00000139330.5|keratocan
hg19_v2_chr15_+_64386261_64386322	0.0254016	NKX1-1	ENST00000560829.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chrX_-_47509887_47509990	0.0237939	NKX1-1	ENST00000247161.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000592066.1|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000376983.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chr3_+_186560476_186560505	0.019943	NKX1-1	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr3_+_186560462_186560473	0.0196076	NKX1-1	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr13_-_36050819_36050834	0.0183478	NKX1-1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr17_-_40337470_40337470	0.0179164	NKX1-1	ENST00000293330.1|HCRT|ENSG00000161610.1|hypocretin (orexin) neuropeptide precursor
hg19_v2_chr4_-_66536196_66536216	0.0151549	NKX1-1	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr19_-_8070474_8070564	0.0135156	NKX1-1	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr12_+_28410128_28410133	0.0128246	NKX1-1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr7_+_144052381_144052509	0.0108071	NKX1-1	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr20_-_50722183_50722217	0.00950919	NKX1-1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr4_-_66536057_66536071	0.00947448	NKX1-1	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chrX_-_153363125_153363182	0.00941256	NKX1-1	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chrX_+_55026763_55026831	0.00868806	NKX1-1	ENST00000374987.3|APEX2|ENSG00000169188.4|APEX nuclease (apurinic/apyrimidinic endonuclease) 2
hg19_v2_chr17_-_10372875_10372876	0.00800153	NKX1-1	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chr11_+_72983246_72983253	0.00696979	NKX1-1	ENST00000393590.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chr1_-_190446759_190446774	0.00551505	NKX1-1	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr15_-_78526942_78527049	0.00312778	NKX1-1	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
