hg19_v2_chr18_+_55888767_55888809	0.637876	NKX2-2	ENST00000431212.2|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000586268.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000587190.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr4_+_74269956_74270025	0.620851	NKX2-2	ENST00000295897.4|ALB|ENSG00000163631.12|albumin 	ENST00000415165.2|ALB|ENSG00000163631.12|albumin 	ENST00000503124.1|ALB|ENSG00000163631.12|albumin 	ENST00000509063.1|ALB|ENSG00000163631.12|albumin 	ENST00000401494.3|ALB|ENSG00000163631.12|albumin
hg19_v2_chr12_-_54689532_54689551	0.598566	NKX2-2	ENST00000540264.2|NFE2|ENSG00000123405.9|nuclear factor, erythroid 2 	ENST00000312156.4|NFE2|ENSG00000123405.9|nuclear factor, erythroid 2
hg19_v2_chr1_-_227505289_227505415	0.51541	NKX2-2	ENST00000366765.3|CDC42BPA|ENSG00000143776.14|CDC42 binding protein kinase alpha (DMPK-like)
hg19_v2_chrX_+_152953505_152953554	0.487319	NKX2-2	ENST00000253122.5|SLC6A8|ENSG00000130821.11|solute carrier family 6 (neurotransmitter transporter), member 8
hg19_v2_chr16_+_30212378_30212378	0.470988	NKX2-2	ENST00000569485.1|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
hg19_v2_chr16_+_30212050_30212050	0.462297	NKX2-2	ENST00000563322.1|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
hg19_v2_chr15_+_58702742_58702777	0.458556	NKX2-2	ENST00000356113.6|LIPC|ENSG00000166035.6|lipase, hepatic 	ENST00000414170.3|LIPC|ENSG00000166035.6|lipase, hepatic
hg19_v2_chr5_+_135394840_135394875	0.457082	NKX2-2	ENST00000503087.1|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa
hg19_v2_chr17_+_52978107_52978118	0.430674	NKX2-2	ENST00000445275.2|TOM1L1|ENSG00000141198.9|target of myb1 (chicken)-like 1
hg19_v2_chrX_+_115567767_115567790	0.404927	NKX2-2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr13_-_67802549_67802707	0.372286	NKX2-2	ENST00000328454.5|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377865.2|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr8_+_97597148_97597173	0.347103	NKX2-2	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr4_-_111563076_111563172	0.341563	NKX2-2	ENST00000354925.2|PITX2|ENSG00000164093.11|paired-like homeodomain 2 	ENST00000511990.1|PITX2|ENSG00000164093.11|paired-like homeodomain 2
hg19_v2_chr17_+_53342311_53342400	0.329705	NKX2-2	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr15_-_56209306_56209344	0.321307	NKX2-2	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr6_+_158733692_158733692	0.317856	NKX2-2	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr6_+_32121789_32121872	0.315964	NKX2-2	ENST00000437001.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000375137.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr17_+_74372662_74372742	0.314537	NKX2-2	ENST00000591651.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1 	ENST00000545180.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1
hg19_v2_chr9_-_99382065_99382151	0.299927	NKX2-2	ENST00000265659.2|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375241.1|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375236.1|CDC14B|ENSG00000081377.12|cell division cycle 14B
hg19_v2_chr2_+_170655322_170655405	0.294132	NKX2-2	ENST00000260956.4|SSB|ENSG00000138385.11|Sjogren syndrome antigen B (autoantigen La) 	ENST00000417292.1|SSB|ENSG00000138385.11|Sjogren syndrome antigen B (autoantigen La)
hg19_v2_chr1_+_54359854_54359884	0.293555	NKX2-2	ENST00000361921.3|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000322679.6|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000532493.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000525202.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000524406.1|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I 	ENST00000388876.3|DIO1|ENSG00000211452.6|deiodinase, iodothyronine, type I
hg19_v2_chr6_+_32121218_32121354	0.273508	NKX2-2	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr1_-_202936394_202936408	0.247647	NKX2-2	ENST00000367249.4|CYB5R1|ENSG00000159348.8|cytochrome b5 reductase 1
hg19_v2_chrX_-_154033661_154033676	0.243754	NKX2-2	ENST00000393531.1|MPP1|ENSG00000130830.10|membrane protein, palmitoylated 1, 55kDa
hg19_v2_chr12_-_28124903_28124957	0.241406	NKX2-2	ENST00000395872.1|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000354417.3|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000201015.4|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone
hg19_v2_chr5_+_108083517_108083576	0.236788	NKX2-2	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr5_+_82767487_82767510	0.236583	NKX2-2	ENST00000343200.5|VCAN|ENSG00000038427.11|versican 	ENST00000342785.4|VCAN|ENSG00000038427.11|versican
hg19_v2_chr8_+_77593448_77593471	0.233948	NKX2-2	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr4_+_155484155_155484178	0.233807	NKX2-2	ENST00000509493.1|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr3_-_114790179_114790222	0.232648	NKX2-2	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr4_+_88720698_88720733	0.217862	NKX2-2	ENST00000226284.5|IBSP|ENSG00000029559.5|integrin-binding sialoprotein
hg19_v2_chr2_+_17721230_17721255	0.213921	NKX2-2	ENST00000457525.1|VSNL1|ENSG00000163032.7|visinin-like 1
hg19_v2_chr5_+_82767583_82767744	0.211513	NKX2-2	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr12_-_8803128_8803164	0.210153	NKX2-2	ENST00000543467.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr13_-_36429763_36429779	0.208412	NKX2-2	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr4_+_80584903_80584915	0.199948	NKX2-2	ENST00000506460.1|RP11-452C8.1|ENSG00000248408.1|RP11-452C8.1
hg19_v2_chr16_-_20556492_20556492	0.198118	NKX2-2	ENST00000568098.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr3_-_196911002_196911116	0.186897	NKX2-2	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr14_+_39734482_39734542	0.184186	NKX2-2	ENST00000554392.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000555716.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000341749.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000557038.1|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr11_-_128894053_128894123	0.182129	NKX2-2	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr17_+_61086917_61086921	0.177476	NKX2-2	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr15_+_65843130_65843157	0.177374	NKX2-2	ENST00000569894.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr8_-_49833978_49833996	0.174118	NKX2-2	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr9_+_131447342_131447362	0.172567	NKX2-2	ENST00000409104.3|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr11_-_72432950_72433073	0.172026	NKX2-2	ENST00000426523.1|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 	ENST00000429686.1|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr8_-_141810634_141810662	0.170339	NKX2-2	ENST00000521986.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000523539.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000538769.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr7_+_2394445_2394550	0.164143	NKX2-2	ENST00000360876.4|EIF3B|ENSG00000106263.13|eukaryotic translation initiation factor 3, subunit B 	ENST00000413917.1|EIF3B|ENSG00000106263.13|eukaryotic translation initiation factor 3, subunit B 	ENST00000397011.2|EIF3B|ENSG00000106263.13|eukaryotic translation initiation factor 3, subunit B
hg19_v2_chr17_+_75315534_75315612	0.163843	NKX2-2	ENST00000590294.1|SEPT9|ENSG00000184640.13|septin 9 	ENST00000329047.8|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr8_+_77593474_77593612	0.163282	NKX2-2	ENST00000455469.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4 	ENST00000050961.6|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr10_+_13203543_13203587	0.161897	NKX2-2	ENST00000378714.3|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000479669.1|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000484800.2|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10
hg19_v2_chr13_+_50656307_50656405	0.159178	NKX2-2	ENST00000378180.4|DLEU1|ENSG00000176124.7|deleted in lymphocytic leukemia 1 (non-protein coding)
hg19_v2_chr8_-_49834299_49834446	0.158949	NKX2-2	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr3_-_33686743_33686807	0.157091	NKX2-2	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr11_-_77850629_77850706	0.155736	NKX2-2	ENST00000376156.3|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525870.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000530454.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525755.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000527099.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000525761.1|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase 	ENST00000299626.5|ALG8|ENSG00000159063.8|ALG8, alpha-1,3-glucosyltransferase
hg19_v2_chr1_-_153363452_153363664	0.155259	NKX2-2	ENST00000368732.1|S100A8|ENSG00000143546.5|S100 calcium binding protein A8 	ENST00000368733.3|S100A8|ENSG00000143546.5|S100 calcium binding protein A8
hg19_v2_chr11_+_9406169_9406210	0.154269	NKX2-2	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr13_+_50570019_50570028	0.150408	NKX2-2	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr19_-_14889349_14889381	0.150129	NKX2-2	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr4_+_155484103_155484147	0.147636	NKX2-2	ENST00000302068.4|FGB|ENSG00000171564.7|fibrinogen beta chain
hg19_v2_chr17_+_66521936_66522026	0.141633	NKX2-2	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chrX_-_70474910_70475154	0.140489	NKX2-2	ENST00000373988.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373998.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr17_+_48823896_48823936	0.13987	NKX2-2	ENST00000511974.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr22_-_36220420_36220447	0.139174	NKX2-2	ENST00000473487.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr5_+_159848854_159848917	0.138276	NKX2-2	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr3_-_170744498_170744542	0.136924	NKX2-2	ENST00000382808.4|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2 	ENST00000314251.3|SLC2A2|ENSG00000163581.9|solute carrier family 2 (facilitated glucose transporter), member 2
hg19_v2_chrM_+_4431_4475	0.131496	NKX2-2	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr2_+_103035102_103035149	0.131211	NKX2-2	ENST00000264260.2|IL18RAP|ENSG00000115607.5|interleukin 18 receptor accessory protein
hg19_v2_chrX_-_32173579_32173593	0.1285	NKX2-2	ENST00000359836.1|DMD|ENSG00000198947.10|dystrophin 	ENST00000343523.2|DMD|ENSG00000198947.10|dystrophin 	ENST00000378707.3|DMD|ENSG00000198947.10|dystrophin 	ENST00000541735.1|DMD|ENSG00000198947.10|dystrophin 	ENST00000474231.1|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr5_+_148206156_148206201	0.125831	NKX2-2	ENST00000305988.4|ADRB2|ENSG00000169252.4|adrenoceptor beta 2, surface
hg19_v2_chr2_-_145275228_145275464	0.123456	NKX2-2	ENST00000427902.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000409487.3|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000470879.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2 	ENST00000435831.1|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr12_-_102591604_102591623	0.121949	NKX2-2	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr4_+_41937131_41937211	0.120354	NKX2-2	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr5_-_78281603_78281617	0.120244	NKX2-2	ENST00000264914.4|ARSB|ENSG00000113273.11|arylsulfatase B
hg19_v2_chr8_-_18666360_18666410	0.119754	NKX2-2	ENST00000286485.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr4_-_76957214_76957350	0.117532	NKX2-2	ENST00000306621.3|CXCL11|ENSG00000169248.8|chemokine (C-X-C motif) ligand 11
hg19_v2_chr4_-_10686475_10686490	0.11463	NKX2-2	ENST00000226951.6|CLNK|ENSG00000109684.10|cytokine-dependent hematopoietic cell linker
hg19_v2_chr12_-_10978957_10978957	0.114507	NKX2-2	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr9_+_92219919_92219953	0.114311	NKX2-2	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr4_+_95376396_95376421	0.113811	NKX2-2	ENST00000508216.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000514743.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chrX_+_123095546_123095644	0.113268	NKX2-2	ENST00000371157.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371145.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371144.3|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr8_-_141774467_141774622	0.111352	NKX2-2	ENST00000520151.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519024.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519465.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr1_-_244006528_244006588	0.110906	NKX2-2	ENST00000336199.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3 	ENST00000263826.5|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr1_-_36615065_36615109	0.106819	NKX2-2	ENST00000373166.3|TRAPPC3|ENSG00000054116.7|trafficking protein particle complex 3 	ENST00000373159.1|TRAPPC3|ENSG00000054116.7|trafficking protein particle complex 3 	ENST00000373162.1|TRAPPC3|ENSG00000054116.7|trafficking protein particle complex 3
hg19_v2_chr6_+_32936353_32936437	0.106735	NKX2-2	ENST00000374825.4|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr3_-_123339343_123339401	0.105952	NKX2-2	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr8_-_102181718_102181857	0.104309	NKX2-2	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
hg19_v2_chr20_-_13765526_13765578	0.102111	NKX2-2	ENST00000202816.1|ESF1|ENSG00000089048.10|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
hg19_v2_chr12_+_41831485_41831555	0.10147	NKX2-2	ENST00000539469.2|PDZRN4|ENSG00000165966.10|PDZ domain containing ring finger 4 	ENST00000298919.7|PDZRN4|ENSG00000165966.10|PDZ domain containing ring finger 4
hg19_v2_chr19_-_18433910_18434084	0.100284	NKX2-2	ENST00000594828.3|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000593829.1|LSM4|ENSG00000130520.6|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr10_+_73156664_73156716	0.0997113	NKX2-2	ENST00000398809.4|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000398842.3|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000461841.3|CDH23|ENSG00000107736.15|cadherin-related 23 	ENST00000299366.7|CDH23|ENSG00000107736.15|cadherin-related 23
hg19_v2_chr3_-_123339418_123339473	0.0993076	NKX2-2	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chrX_+_47092314_47092431	0.0990626	NKX2-2	ENST00000218348.3|USP11|ENSG00000102226.5|ubiquitin specific peptidase 11
hg19_v2_chr1_+_117963209_117963245	0.0975561	NKX2-2	ENST00000449370.2|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr16_+_10837643_10837714	0.0971571	NKX2-2	ENST00000574334.1|NUBP1|ENSG00000103274.6|nucleotide binding protein 1 	ENST00000283027.5|NUBP1|ENSG00000103274.6|nucleotide binding protein 1 	ENST00000433392.2|NUBP1|ENSG00000103274.6|nucleotide binding protein 1
hg19_v2_chr1_-_36615051_36615062	0.0952017	NKX2-2	ENST00000373163.1|TRAPPC3|ENSG00000054116.7|trafficking protein particle complex 3
hg19_v2_chr5_-_179047881_179047960	0.095196	NKX2-2	ENST00000521173.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr11_-_72433346_72433409	0.0951361	NKX2-2	ENST00000334211.8|ARAP1|ENSG00000186635.10|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
hg19_v2_chr2_+_120436733_120436759	0.0945414	NKX2-2	ENST00000401466.1|TMEM177|ENSG00000144120.8|transmembrane protein 177 	ENST00000424086.1|TMEM177|ENSG00000144120.8|transmembrane protein 177 	ENST00000272521.6|TMEM177|ENSG00000144120.8|transmembrane protein 177
hg19_v2_chr2_-_24270217_24270232	0.0935033	NKX2-2	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr5_+_167718604_167718746	0.0916047	NKX2-2	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chr8_-_121457332_121457350	0.0905316	NKX2-2	ENST00000518918.1|MRPL13|ENSG00000172172.3|mitochondrial ribosomal protein L13
hg19_v2_chrM_+_12331_12348	0.0903018	NKX2-2	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr15_-_56757329_56757342	0.0902133	NKX2-2	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr22_-_42086477_42086508	0.0892189	NKX2-2	ENST00000402458.1|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v2_chr5_+_159848807_159848847	0.0889185	NKX2-2	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr8_+_110552337_110552423	0.0887238	NKX2-2	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr5_+_125758865_125758876	0.0885687	NKX2-2	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr12_-_71551652_71551679	0.0854384	NKX2-2	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr1_+_202431859_202431871	0.0842798	NKX2-2	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr21_-_36421401_36421462	0.0838541	NKX2-2	ENST00000486278.2|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr2_-_27558270_27558295	0.0788999	NKX2-2	ENST00000454704.1|GTF3C2|ENSG00000115207.9|general transcription factor IIIC, polypeptide 2, beta 110kDa
hg19_v2_chr7_+_102715315_102715380	0.0778918	NKX2-2	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr5_-_11588907_11588967	0.0772976	NKX2-2	ENST00000513598.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000503622.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr5_-_58335281_58335339	0.0766387	NKX2-2	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr12_+_14572070_14572164	0.0765638	NKX2-2	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr1_+_15272271_15272415	0.0764833	NKX2-2	ENST00000400797.3|KAZN|ENSG00000189337.11|kazrin, periplakin interacting protein
hg19_v2_chr15_-_42840961_42841005	0.0751207	NKX2-2	ENST00000563454.1|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000397130.3|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000570160.1|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57 	ENST00000323443.2|LRRC57|ENSG00000180979.5|leucine rich repeat containing 57
hg19_v2_chr6_-_11779014_11779065	0.0747205	NKX2-2	ENST00000229583.5|ADTRP|ENSG00000111863.8|androgen-dependent TFPI-regulating protein
hg19_v2_chr5_+_125758813_125758845	0.0744162	NKX2-2	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr17_-_2966901_2966901	0.0741403	NKX2-2	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr7_-_22233442_22233527	0.0733999	NKX2-2	ENST00000401957.2|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr4_-_110723335_110723356	0.0730628	NKX2-2	ENST00000394634.2|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr6_-_150067632_150067693	0.0723987	NKX2-2	ENST00000460354.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367404.4|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000543637.1|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr18_-_60985914_60986045	0.0693717	NKX2-2	ENST00000589955.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr20_+_30697510_30697547	0.0682318	NKX2-2	ENST00000217315.5|TM9SF4|ENSG00000101337.11|transmembrane 9 superfamily protein member 4
hg19_v2_chr14_-_50154921_50155140	0.0679549	NKX2-2	ENST00000553805.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000554396.1|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000216367.5|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000539565.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit
hg19_v2_chr17_+_48823975_48824003	0.0664019	NKX2-2	ENST00000513969.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000503728.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr6_+_44355257_44355315	0.0639728	NKX2-2	ENST00000371477.3|CDC5L|ENSG00000096401.7|cell division cycle 5-like
hg19_v2_chr16_+_22501658_22501658	0.0635948	NKX2-2	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr11_-_11374904_11374904	0.0632527	NKX2-2	ENST00000528848.2|CSNK2A3|ENSG00000254598.2|casein kinase 2, alpha 3 polypeptide
hg19_v2_chr17_+_7591639_7591672	0.0632116	NKX2-2	ENST00000396463.2|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr6_-_150067696_150067814	0.0631965	NKX2-2	ENST00000340413.2|NUP43|ENSG00000120253.9|nucleoporin 43kDa 	ENST00000367403.3|NUP43|ENSG00000120253.9|nucleoporin 43kDa
hg19_v2_chr20_+_30697298_30697330	0.0622967	NKX2-2	ENST00000398022.2|TM9SF4|ENSG00000101337.11|transmembrane 9 superfamily protein member 4
hg19_v2_chr2_+_162087577_162087697	0.0620293	NKX2-2	ENST00000439442.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr1_+_150898812_150898957	0.0606794	NKX2-2	ENST00000271640.5|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000448029.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368962.2|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000534805.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368969.4|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368963.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000498193.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1
hg19_v2_chr8_-_133637624_133637635	0.0606361	NKX2-2	ENST00000522789.1|LRRC6|ENSG00000129295.4|leucine rich repeat containing 6
hg19_v2_chr19_+_47634039_47634157	0.0585362	NKX2-2	ENST00000597808.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000413379.3|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000600706.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000540850.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000598840.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000600753.1|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000270225.7|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1 	ENST00000392776.3|SAE1|ENSG00000142230.7|SUMO1 activating enzyme subunit 1
hg19_v2_chr6_+_45296391_45296464	0.0582863	NKX2-2	ENST00000371436.6|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000576263.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr8_-_22526597_22526661	0.0580122	NKX2-2	ENST00000519513.1|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000276416.6|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000520292.1|BIN3|ENSG00000147439.7|bridging integrator 3 	ENST00000522268.1|BIN3|ENSG00000147439.7|bridging integrator 3
hg19_v2_chr1_-_31538517_31538632	0.0575828	NKX2-2	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr14_+_39703084_39703110	0.0560279	NKX2-2	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr7_-_107443652_107443675	0.0550969	NKX2-2	ENST00000340010.5|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000422236.2|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3 	ENST00000453332.1|SLC26A3|ENSG00000091138.8|solute carrier family 26 (anion exchanger), member 3
hg19_v2_chr19_-_39881669_39881773	0.0550654	NKX2-2	ENST00000221266.7|PAF1|ENSG00000006712.10|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
hg19_v2_chr5_+_40909354_40909354	0.0548919	NKX2-2	ENST00000313164.9|C7|ENSG00000112936.14|complement component 7
hg19_v2_chr13_+_25875785_25875808	0.0547747	NKX2-2	ENST00000381747.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr18_-_60986613_60986662	0.0540278	NKX2-2	ENST00000444484.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr9_+_123970052_123970086	0.0534702	NKX2-2	ENST00000373823.3|GSN|ENSG00000148180.12|gelsolin
hg19_v2_chr12_+_52056548_52056602	0.0530554	NKX2-2	ENST00000545061.1|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit 	ENST00000355133.3|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr2_+_162272605_162272753	0.0524617	NKX2-2	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr13_+_25875662_25875782	0.0522301	NKX2-2	ENST00000381736.3|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000463407.1|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000381718.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr5_-_58652788_58652840	0.051409	NKX2-2	ENST00000405755.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr13_+_102104952_102104966	0.0510721	NKX2-2	ENST00000376180.3|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr20_+_56964169_56964182	0.0505936	NKX2-2	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr7_-_22234381_22234430	0.05034	NKX2-2	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr8_+_110552831_110552867	0.050262	NKX2-2	ENST00000530629.1|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr14_-_25078864_25078905	0.0499403	NKX2-2	ENST00000216338.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000557220.2|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX) 	ENST00000382548.4|GZMH|ENSG00000100450.8|granzyme H (cathepsin G-like 2, protein h-CCPX)
hg19_v2_chr2_+_171034646_171034706	0.0491288	NKX2-2	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr2_+_152266392_152266482	0.0486961	NKX2-2	ENST00000444746.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000453091.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000428287.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000433166.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000420714.3|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000243326.5|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast) 	ENST00000414861.2|RIF1|ENSG00000080345.13|RAP1 interacting factor homolog (yeast)
hg19_v2_chr2_-_217724767_217724795	0.0485634	NKX2-2	ENST00000236979.2|TNP1|ENSG00000118245.2|transition protein 1 (during histone to protamine replacement)
hg19_v2_chr1_+_224301787_224301836	0.0473902	NKX2-2	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr6_+_20534672_20534745	0.0473833	NKX2-2	ENST00000274695.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1 	ENST00000378624.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1
hg19_v2_chr17_+_38171681_38171740	0.0465129	NKX2-2	ENST00000225474.2|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000331769.2|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394148.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000577675.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr17_-_42143963_42144103	0.0443648	NKX2-2	ENST00000585388.1|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae) 	ENST00000293406.3|LSM12|ENSG00000161654.5|LSM12 homolog (S. cerevisiae)
hg19_v2_chr1_+_171217622_171217676	0.0441407	NKX2-2	ENST00000433267.1|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1 	ENST00000367750.3|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr7_+_32535060_32535322	0.0435221	NKX2-2	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr1_-_160231451_160231592	0.0432494	NKX2-2	ENST00000495887.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr18_+_9103957_9104080	0.0431601	NKX2-2	ENST00000400033.1|NDUFV2|ENSG00000178127.8|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa
hg19_v2_chr1_+_211433275_211433335	0.0428915	NKX2-2	ENST00000367005.4|RCOR3|ENSG00000117625.9|REST corepressor 3
hg19_v2_chr17_+_7591747_7591809	0.0424742	NKX2-2	ENST00000534050.1|WRAP53|ENSG00000141499.12|WD repeat containing, antisense to TP53
hg19_v2_chr4_+_113739244_113739320	0.0419729	NKX2-2	ENST00000503271.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000503423.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000506722.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr9_-_86593238_86593367	0.0416297	NKX2-2	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chrX_-_70473957_70474049	0.041535	NKX2-2	ENST00000373984.3|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000314425.5|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3 	ENST00000373982.1|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr7_+_93535866_93535906	0.0414334	NKX2-2	ENST00000429473.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000430875.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 	ENST00000428834.1|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr8_-_122653630_122653661	0.0398889	NKX2-2	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr17_+_38171614_38171635	0.0392357	NKX2-2	ENST00000583218.1|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte) 	ENST00000394149.3|CSF3|ENSG00000108342.8|colony stimulating factor 3 (granulocyte)
hg19_v2_chr8_-_121457608_121457650	0.0390626	NKX2-2	ENST00000306185.3|MRPL13|ENSG00000172172.3|mitochondrial ribosomal protein L13
hg19_v2_chr5_-_11589131_11589169	0.0389172	NKX2-2	ENST00000511377.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr5_-_98262240_98262240	0.0385278	NKX2-2	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr9_+_71944241_71944241	0.0375838	NKX2-2	ENST00000257515.8|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr2_-_40739501_40739582	0.0365967	NKX2-2	ENST00000403092.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000402441.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000448531.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr4_+_144303093_144303132	0.0357809	NKX2-2	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_+_45296048_45296106	0.035604	NKX2-2	ENST00000465038.2|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000352853.5|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000541979.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2 	ENST00000371438.1|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr9_+_37753795_37753820	0.0353274	NKX2-2	ENST00000377753.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000537911.1|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000377754.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000297994.3|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae)
hg19_v2_chrX_-_153363188_153363212	0.0349855	NKX2-2	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr3_-_113897899_113897899	0.0348258	NKX2-2	ENST00000383673.2|DRD3|ENSG00000151577.8|dopamine receptor D3 	ENST00000295881.7|DRD3|ENSG00000151577.8|dopamine receptor D3
hg19_v2_chr5_+_140552218_140552244	0.0344054	NKX2-2	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr4_+_95679072_95679125	0.0343767	NKX2-2	ENST00000515059.1|BMPR1B|ENSG00000138696.6|bone morphogenetic protein receptor, type IB
hg19_v2_chr6_+_55039050_55039050	0.0336761	NKX2-2	ENST00000370862.3|HCRTR2|ENSG00000137252.5|hypocretin (orexin) receptor 2
hg19_v2_chr7_+_93535817_93535822	0.0336112	NKX2-2	ENST00000248572.5|GNGT1|ENSG00000127928.8|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1
hg19_v2_chr12_-_120315074_120315097	0.033144	NKX2-2	ENST00000261833.7|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21) 	ENST00000392521.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chrX_-_130037198_130037234	0.0331335	NKX2-2	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr8_-_134072593_134072606	0.0331102	NKX2-2	ENST00000427060.2|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr1_+_50459990_50459990	0.0327379	NKX2-2	ENST00000448346.1|AL645730.2|ENSG00000227839.1|AL645730.2
hg19_v2_chr1_-_110155671_110155685	0.0324217	NKX2-2	ENST00000351050.3|GNAT2|ENSG00000134183.7|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
hg19_v2_chr5_+_34757309_34757417	0.0321739	NKX2-2	ENST00000397449.1|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr3_+_189507523_189507590	0.0318806	NKX2-2	ENST00000437221.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392463.2|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392461.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000449992.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000456148.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr1_-_115259337_115259515	0.0318757	NKX2-2	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr5_+_140602904_140603078	0.0315037	NKX2-2	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr9_-_95166841_95166867	0.0313473	NKX2-2	ENST00000262551.4|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chr9_+_37667978_37668028	0.0306174	NKX2-2	ENST00000539465.1|FRMPD1|ENSG00000070601.5|FERM and PDZ domain containing 1
hg19_v2_chr7_-_44265492_44265523	0.0301732	NKX2-2	ENST00000425809.1|CAMK2B|ENSG00000058404.15|calcium/calmodulin-dependent protein kinase II beta
hg19_v2_chr1_-_154150651_154150691	0.0290716	NKX2-2	ENST00000302206.5|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr5_-_41261540_41261575	0.0275382	NKX2-2	ENST00000263413.3|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr7_+_123488124_123488124	0.0268621	NKX2-2	ENST00000476325.1|HYAL4|ENSG00000106302.5|hyaluronoglucosaminidase 4
hg19_v2_chr11_+_107879459_107879702	0.0266364	NKX2-2	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr22_-_50523760_50523787	0.0256488	NKX2-2	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr14_+_22962898_22962925	0.0254373	NKX2-2	ENST00000390492.1|TRAJ45|ENSG00000211844.1|T cell receptor alpha joining 45
hg19_v2_chr8_+_76452097_76452126	0.0244529	NKX2-2	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr18_+_29671812_29671892	0.0242524	NKX2-2	ENST00000261593.3|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase 	ENST00000578914.1|RNF138|ENSG00000134758.9|ring finger protein 138, E3 ubiquitin protein ligase
hg19_v2_chr3_+_63953415_63953430	0.0238423	NKX2-2	ENST00000484332.1|ATXN7|ENSG00000163635.13|ataxin 7
hg19_v2_chr15_+_42841008_42841061	0.0234561	NKX2-2	ENST00000260372.3|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000568876.1|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000568846.2|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2 	ENST00000562398.1|HAUS2|ENSG00000137814.5|HAUS augmin-like complex, subunit 2
hg19_v2_chr14_+_96968707_96968788	0.0228751	NKX2-2	ENST00000216277.8|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557320.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557471.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr11_+_22689648_22689665	0.0224879	NKX2-2	ENST00000278187.3|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr6_-_26027480_26027522	0.0224254	NKX2-2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr9_-_95166884_95166908	0.0220899	NKX2-2	ENST00000375561.5|OGN|ENSG00000106809.6|osteoglycin
hg19_v2_chrX_-_19988382_19988416	0.0213689	NKX2-2	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr13_-_36944307_36944322	0.020752	NKX2-2	ENST00000355182.4|SPG20|ENSG00000133104.8|spastic paraplegia 20 (Troyer syndrome)
hg19_v2_chr5_-_58571935_58571951	0.0206626	NKX2-2	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr1_+_180601139_180601180	0.0201046	NKX2-2	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr12_+_101988774_101988849	0.0197943	NKX2-2	ENST00000545503.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000536007.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000541119.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361466.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000551300.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000550270.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chr13_+_102104980_102105050	0.018876	NKX2-2	ENST00000545560.2|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chr11_-_128712362_128712429	0.0175377	NKX2-2	ENST00000392664.2|KCNJ1|ENSG00000151704.11|potassium inwardly-rectifying channel, subfamily J, member 1
hg19_v2_chr1_+_171217677_171217703	0.0174633	NKX2-2	ENST00000402921.2|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr3_+_142838091_142838173	0.0170221	NKX2-2	ENST00000309575.3|CHST2|ENSG00000175040.4|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
hg19_v2_chr4_+_128802016_128802095	0.0168188	NKX2-2	ENST00000270861.5|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000515069.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000513090.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000507249.1|PLK4|ENSG00000142731.6|polo-like kinase 4
hg19_v2_chr3_+_189507432_189507459	0.0160894	NKX2-2	ENST00000354600.5|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr3_+_38206975_38207101	0.0155067	NKX2-2	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr17_-_38859996_38860010	0.0141716	NKX2-2	ENST00000264651.2|KRT24|ENSG00000167916.4|keratin 24
hg19_v2_chrX_-_11308598_11308610	0.013797	NKX2-2	ENST00000380717.3|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr1_+_241695424_241695440	0.0132897	NKX2-2	ENST00000366558.3|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 	ENST00000366559.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chrX_-_70474499_70474564	0.0130861	NKX2-2	ENST00000353904.2|ZMYM3|ENSG00000147130.10|zinc finger, MYM-type 3
hg19_v2_chr5_+_140800638_140800795	0.0128534	NKX2-2	ENST00000398587.2|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11 	ENST00000518882.1|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11
hg19_v2_chr1_+_120049826_120049941	0.0128256	NKX2-2	ENST00000369413.3|HSD3B1|ENSG00000203857.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 	ENST00000235547.6|HSD3B1|ENSG00000203857.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 	ENST00000528909.1|HSD3B1|ENSG00000203857.5|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
hg19_v2_chr12_-_111926342_111926416	0.0120602	NKX2-2	ENST00000389154.3|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr1_-_223308098_223308225	0.0115281	NKX2-2	ENST00000342210.6|TLR5|ENSG00000187554.7|toll-like receptor 5
hg19_v2_chr20_-_60573188_60573243	0.0108117	NKX2-2	ENST00000474089.1|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr5_+_118812294_118812324	0.0105818	NKX2-2	ENST00000509514.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr8_+_128426535_128426535	0.0101981	NKX2-2	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr19_-_44174330_44174502	0.00991507	NKX2-2	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr2_+_224822121_224822190	0.00990623	NKX2-2	ENST00000258383.3|MRPL44|ENSG00000135900.3|mitochondrial ribosomal protein L44
hg19_v2_chr1_+_241695670_241695705	0.00982919	NKX2-2	ENST00000366557.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr3_-_150920979_150921009	0.00952628	NKX2-2	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr5_+_159343688_159343790	0.00939905	NKX2-2	ENST00000306675.3|ADRA1B|ENSG00000170214.3|adrenoceptor alpha 1B
hg19_v2_chr3_-_167191814_167191842	0.00911756	NKX2-2	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr6_-_73935163_73935175	0.00862485	NKX2-2	ENST00000370388.3|KHDC1L|ENSG00000256980.4|KH homology domain containing 1-like
hg19_v2_chr5_+_118812237_118812251	0.00830276	NKX2-2	ENST00000513628.1|HSD17B4|ENSG00000133835.10|hydroxysteroid (17-beta) dehydrogenase 4
hg19_v2_chr7_-_99149715_99149757	0.00709288	NKX2-2	ENST00000449309.1|FAM200A|ENSG00000221909.2|family with sequence similarity 200, member A
hg19_v2_chr12_-_10955226_10955226	0.0064995	NKX2-2	ENST00000240687.2|TAS2R7|ENSG00000121377.2|taste receptor, type 2, member 7
hg19_v2_chr14_-_20801427_20801457	0.00644844	NKX2-2	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chr17_-_3496171_3496171	0.0060889	NKX2-2	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr2_-_239198743_239198784	0.00592183	NKX2-2	ENST00000440245.1|PER2|ENSG00000132326.7|period circadian clock 2 	ENST00000431832.1|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr8_-_101719159_101719226	0.00571057	NKX2-2	ENST00000520868.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522658.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr1_-_155880672_155880715	0.004936	NKX2-2	ENST00000609492.1|RIT1|ENSG00000143622.6|Ras-like without CAAX 1 	ENST00000368322.3|RIT1|ENSG00000143622.6|Ras-like without CAAX 1
hg19_v2_chrX_-_15333736_15333767	0.00285931	NKX2-2	ENST00000380470.3|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr4_+_87928140_87928165	0.00124865	NKX2-2	ENST00000307808.6|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr19_-_51568324_51568371	0.00104482	NKX2-2	ENST00000595547.1|KLK13|ENSG00000167759.8|kallikrein-related peptidase 13 	ENST00000335422.3|KLK13|ENSG00000167759.8|kallikrein-related peptidase 13 	ENST00000595793.1|KLK13|ENSG00000167759.8|kallikrein-related peptidase 13 	ENST00000596955.1|KLK13|ENSG00000167759.8|kallikrein-related peptidase 13
hg19_v2_chr9_-_98079965_98080008	0.00102531	NKX2-2	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr8_+_26150628_26150749	0.000454789	NKX2-2	ENST00000523925.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000315985.7|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chrX_+_83116142_83116164	0.000306728	NKX2-2	ENST00000329312.4|CYLC1|ENSG00000183035.8|cylicin, basic protein of sperm head cytoskeleton 1
hg19_v2_chr1_-_216978709_216978728	7.39233e-05	NKX2-2	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
