hg19_v2_chr9_-_14180778_14180808	3.80315	NKX3-1	ENST00000380924.1|NFIB|ENSG00000147862.10|nuclear factor I/B 	ENST00000543693.1|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr18_+_61445007_61445021	3.7327	NKX3-1	ENST00000447428.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7 	ENST00000546027.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr20_-_56285595_56285656	3.60069	NKX3-1	ENST00000395816.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000347215.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr9_+_706842_706889	3.37987	NKX3-1	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr20_-_56286479_56286541	3.26202	NKX3-1	ENST00000265626.4|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr8_-_49834299_49834446	3.25606	NKX3-1	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr16_+_3068393_3068446	3.07449	NKX3-1	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr8_-_49833978_49833996	3.06505	NKX3-1	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr8_+_30300119_30300137	2.69416	NKX3-1	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr17_+_48609903_48609947	2.61942	NKX3-1	ENST00000268933.3|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr3_+_158991025_158991083	2.41641	NKX3-1	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr7_+_79765071_79765103	2.38608	NKX3-1	ENST00000457358.2|GNAI1|ENSG00000127955.11|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
hg19_v2_chr7_+_121513143_121513153	2.10783	NKX3-1	ENST00000393386.2|PTPRZ1|ENSG00000106278.7|protein tyrosine phosphatase, receptor-type, Z polypeptide 1
hg19_v2_chr1_+_186798073_186798147	2.06299	NKX3-1	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chrX_-_107681633_107681692	1.89161	NKX3-1	ENST00000394872.2|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6 	ENST00000334504.7|COL4A6|ENSG00000197565.11|collagen, type IV, alpha 6
hg19_v2_chr11_+_101983176_101983245	1.88203	NKX3-1	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr11_+_114168085_114168222	1.82557	NKX3-1	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chrX_+_114795489_114795582	1.73972	NKX3-1	ENST00000355899.3|PLS3|ENSG00000102024.13|plastin 3 	ENST00000537301.1|PLS3|ENSG00000102024.13|plastin 3 	ENST00000289290.3|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr9_+_90341024_90341055	1.67899	NKX3-1	ENST00000340342.6|CTSL|ENSG00000135047.10|cathepsin L 	ENST00000342020.5|CTSL|ENSG00000135047.10|cathepsin L
hg19_v2_chr19_-_44174330_44174502	1.63848	NKX3-1	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr4_-_90757364_90757396	1.63091	NKX3-1	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr2_+_102456277_102456290	1.5652	NKX3-1	ENST00000421882.1|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr1_-_32169920_32169988	1.55934	NKX3-1	ENST00000373672.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1 	ENST00000373668.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chrX_-_153637612_153637628	1.55601	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr1_-_32169761_32169776	1.53694	NKX3-1	ENST00000271069.6|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr5_+_125758865_125758876	1.24322	NKX3-1	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr5_+_125758813_125758845	1.20882	NKX3-1	ENST00000285689.3|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000515200.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr1_-_208417620_208417680	1.17326	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr4_-_90756769_90756846	1.15278	NKX3-1	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr17_-_7307358_7307456	1.09313	NKX3-1	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr5_+_96211643_96211697	1.03057	NKX3-1	ENST00000437043.3|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2 	ENST00000510373.1|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr17_+_48610074_48610107	1.02752	NKX3-1	ENST00000503690.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000514874.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000537145.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000541226.1|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr3_-_48632593_48632770	0.974088	NKX3-1	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr4_-_170924888_170924950	0.960708	NKX3-1	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr17_+_2699697_2699776	0.946228	NKX3-1	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr19_-_44174305_44174329	0.938021	NKX3-1	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr5_+_96038476_96038517	0.86786	NKX3-1	ENST00000511049.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000309190.5|CAST|ENSG00000153113.19|calpastatin 	ENST00000510156.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000509903.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000511782.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000504465.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr3_-_18480260_18480269	0.848963	NKX3-1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chrX_-_114253536_114253561	0.838347	NKX3-1	ENST00000371936.1|IL13RA2|ENSG00000123496.3|interleukin 13 receptor, alpha 2
hg19_v2_chr4_-_141677267_141677291	0.818509	NKX3-1	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr9_+_116263639_116263707	0.791401	NKX3-1	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr1_-_6445809_6445885	0.698916	NKX3-1	ENST00000377855.2|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr3_+_100428188_100428222	0.696419	NKX3-1	ENST00000418917.2|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000490574.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr4_+_56719782_56719963	0.692187	NKX3-1	ENST00000381295.2|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000346134.7|EXOC1|ENSG00000090989.13|exocyst complex component 1 	ENST00000349598.6|EXOC1|ENSG00000090989.13|exocyst complex component 1
hg19_v2_chr1_-_153066998_153067008	0.679963	NKX3-1	ENST00000368750.3|SPRR2E|ENSG00000203785.4|small proline-rich protein 2E
hg19_v2_chr1_-_153113927_153113972	0.662747	NKX3-1	ENST00000368752.4|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr16_-_69760409_69760571	0.633176	NKX3-1	ENST00000561500.1|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000439109.2|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000564043.1|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000379046.2|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1 	ENST00000379047.3|NQO1|ENSG00000181019.8|NAD(P)H dehydrogenase, quinone 1
hg19_v2_chr6_+_143999072_143999170	0.604988	NKX3-1	ENST00000440869.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000367582.3|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000451827.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr3_+_100428316_100428471	0.583782	NKX3-1	ENST00000479672.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000476228.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000463568.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr12_+_110011571_110011644	0.569194	NKX3-1	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr3_+_100428268_100428287	0.568064	NKX3-1	ENST00000240851.4|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr17_-_76870126_76870201	0.556927	NKX3-1	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr6_-_159240415_159240444	0.556539	NKX3-1	ENST00000367075.3|EZR|ENSG00000092820.13|ezrin
hg19_v2_chr5_-_176889381_176889432	0.543253	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr17_-_76870222_76870242	0.530231	NKX3-1	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr13_+_115000556_115000573	0.530149	NKX3-1	ENST00000252458.6|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr3_+_52489503_52489540	0.526948	NKX3-1	ENST00000345716.4|NISCH|ENSG00000010322.11|nischarin
hg19_v2_chr8_-_38034192_38034217	0.516545	NKX3-1	ENST00000520755.1|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr6_+_63921399_63921462	0.495444	NKX3-1	ENST00000356170.3|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr1_-_21377447_21377487	0.48176	NKX3-1	ENST00000374937.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000264211.8|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr1_-_60392452_60392499	0.480056	NKX3-1	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
hg19_v2_chr12_-_53298841_53298867	0.469508	NKX3-1	ENST00000293308.6|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr7_-_2883928_2883993	0.457024	NKX3-1	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr10_-_32345305_32345376	0.439775	NKX3-1	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr4_-_70626314_70626325	0.426974	NKX3-1	ENST00000510821.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr7_+_5938351_5938379	0.42563	NKX3-1	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr1_-_153085984_153085999	0.421378	NKX3-1	ENST00000468739.1|SPRR2F|ENSG00000244094.1|small proline-rich protein 2F
hg19_v2_chr14_-_23388338_23388393	0.419873	NKX3-1	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr8_-_38034234_38034258	0.418709	NKX3-1	ENST00000311351.4|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr13_+_50570019_50570028	0.414675	NKX3-1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr11_-_64684672_64684722	0.401721	NKX3-1	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr19_+_17970677_17970686	0.395512	NKX3-1	ENST00000222247.5|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr19_+_17970693_17970741	0.39367	NKX3-1	ENST00000600147.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a 	ENST00000599898.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr17_+_42422662_42422678	0.375054	NKX3-1	ENST00000593167.1|GRN|ENSG00000030582.12|granulin 	ENST00000585512.1|GRN|ENSG00000030582.12|granulin 	ENST00000591740.1|GRN|ENSG00000030582.12|granulin 	ENST00000592783.1|GRN|ENSG00000030582.12|granulin 	ENST00000587387.1|GRN|ENSG00000030582.12|granulin 	ENST00000588237.1|GRN|ENSG00000030582.12|granulin 	ENST00000589265.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chrX_-_153236819_153236978	0.370415	NKX3-1	ENST00000354233.3|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr17_-_37009882_37010096	0.363012	NKX3-1	ENST00000378096.3|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394332.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000394333.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000577407.1|RPL23|ENSG00000125691.8|ribosomal protein L23 	ENST00000479035.2|RPL23|ENSG00000125691.8|ribosomal protein L23
hg19_v2_chr5_+_150404904_150404928	0.357153	NKX3-1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr12_-_89920030_89920039	0.353148	NKX3-1	ENST00000413530.1|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) 	ENST00000547474.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr15_+_44084503_44084575	0.351089	NKX3-1	ENST00000409960.2|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409646.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000594896.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000339624.5|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409291.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000402131.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000403425.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000430901.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr6_-_144385698_144385742	0.349906	NKX3-1	ENST00000444202.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000437412.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr6_-_33285505_33285529	0.341917	NKX3-1	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr5_-_43412418_43412499	0.339013	NKX3-1	ENST00000537013.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28 	ENST00000361115.4|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr14_-_65409438_65409479	0.338838	NKX3-1	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr5_+_140723601_140723601	0.33594	NKX3-1	ENST00000253812.6|PCDHGA3|ENSG00000254245.1|protocadherin gamma subfamily A, 3
hg19_v2_chr11_+_71791693_71791799	0.334382	NKX3-1	ENST00000289488.2|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000447974.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr7_+_5938386_5938433	0.334053	NKX3-1	ENST00000537980.1|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr12_-_89919965_89919978	0.331336	NKX3-1	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr17_+_66521936_66522026	0.329948	NKX3-1	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr1_-_48866517_48866534	0.329076	NKX3-1	ENST00000371841.1|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr2_+_64069459_64069579	0.328522	NKX3-1	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr2_+_64068844_64068997	0.328054	NKX3-1	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr2_+_173686303_173686325	0.32245	NKX3-1	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr3_+_98482175_98482197	0.320089	NKX3-1	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr16_-_3074231_3074313	0.313794	NKX3-1	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr6_-_57087042_57087128	0.305555	NKX3-1	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr7_+_77325738_77325789	0.304436	NKX3-1	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr12_-_125398654_125398687	0.300361	NKX3-1	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr11_+_65337901_65338153	0.297076	NKX3-1	ENST00000309328.3|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000531405.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000527920.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526877.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000533115.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526433.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1
hg19_v2_chr12_+_111051902_111051975	0.296976	NKX3-1	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr17_-_29624343_29624429	0.295018	NKX3-1	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr11_+_67798090_67798101	0.291298	NKX3-1	ENST00000313468.5|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chrX_-_153237258_153237295	0.284386	NKX3-1	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr7_-_6865826_6865826	0.278748	NKX3-1	ENST00000538180.1|CCZ1B|ENSG00000146574.11|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
hg19_v2_chr17_+_42422637_42422655	0.278483	NKX3-1	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr15_+_85147127_85147142	0.273087	NKX3-1	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr17_-_64187973_64188043	0.270071	NKX3-1	ENST00000583358.1|CEP112|ENSG00000154240.12|centrosomal protein 112kDa 	ENST00000392769.2|CEP112|ENSG00000154240.12|centrosomal protein 112kDa
hg19_v2_chr19_-_15544099_15544156	0.26914	NKX3-1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr4_-_122791583_122791657	0.265738	NKX3-1	ENST00000506636.1|BBS7|ENSG00000138686.5|Bardet-Biedl syndrome 7 	ENST00000264499.4|BBS7|ENSG00000138686.5|Bardet-Biedl syndrome 7
hg19_v2_chr12_-_10562356_10562356	0.263857	NKX3-1	ENST00000309384.1|KLRC4|ENSG00000183542.4|killer cell lectin-like receptor subfamily C, member 4
hg19_v2_chr1_+_158223923_158223927	0.261477	NKX3-1	ENST00000289429.5|CD1A|ENSG00000158477.6|CD1a molecule
hg19_v2_chrX_+_153237740_153237778	0.257813	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr16_-_66864806_66864900	0.257556	NKX3-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr11_+_8704748_8704792	0.244021	NKX3-1	ENST00000526562.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a 	ENST00000525981.1|RPL27A|ENSG00000166441.8|ribosomal protein L27a
hg19_v2_chr16_+_1832902_1833008	0.243651	NKX3-1	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr1_+_22962948_22962999	0.236911	NKX3-1	ENST00000374642.3|C1QA|ENSG00000173372.12|complement component 1, q subcomponent, A chain
hg19_v2_chr9_+_36572851_36572932	0.234214	NKX3-1	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr4_-_10118469_10118521	0.230834	NKX3-1	ENST00000499869.2|WDR1|ENSG00000071127.12|WD repeat domain 1
hg19_v2_chr16_+_22501658_22501658	0.229385	NKX3-1	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr11_+_67798114_67798227	0.227224	NKX3-1	ENST00000453471.2|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000528492.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000526339.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000525419.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr20_+_123010_123152	0.222593	NKX3-1	ENST00000382398.3|DEFB126|ENSG00000125788.5|defensin, beta 126
hg19_v2_chr20_+_2821340_2821365	0.21724	NKX3-1	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr15_+_44084040_44084155	0.205953	NKX3-1	ENST00000249786.4|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr10_-_104953009_104953061	0.197509	NKX3-1	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr12_+_111051832_111051873	0.195993	NKX3-1	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr17_-_7145475_7145774	0.193328	NKX3-1	ENST00000571129.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000571253.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein 	ENST00000573928.1|GABARAP|ENSG00000170296.5|GABA(A) receptor-associated protein
hg19_v2_chr12_-_125398602_125398625	0.191763	NKX3-1	ENST00000541272.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000535131.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr2_+_113672770_113672770	0.190172	NKX3-1	ENST00000311328.2|IL37|ENSG00000125571.5|interleukin 37
hg19_v2_chr1_+_158323244_158323269	0.18855	NKX3-1	ENST00000434258.1|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chr7_+_7222233_7222327	0.187217	NKX3-1	ENST00000436587.2|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr6_+_43266063_43266097	0.183466	NKX3-1	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr8_-_93029865_93029904	0.183137	NKX3-1	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr17_-_2966901_2966901	0.18303	NKX3-1	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr13_+_115000521_115000536	0.18101	NKX3-1	ENST00000252457.5|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375308.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr1_-_77685084_77685122	0.179972	NKX3-1	ENST00000370812.3|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000359130.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000445065.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000370813.5|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K
hg19_v2_chr19_-_1592652_1592762	0.174824	NKX3-1	ENST00000156825.1|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3 	ENST00000434436.3|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3
hg19_v2_chr1_-_216978709_216978728	0.174555	NKX3-1	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr1_+_173793777_173793829	0.17172	NKX3-1	ENST00000239457.5|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr2_-_79313973_79314059	0.169102	NKX3-1	ENST00000454188.1|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chrX_-_24665353_24665382	0.158661	NKX3-1	ENST00000379144.2|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr17_+_80674559_80674663	0.151065	NKX3-1	ENST00000269373.6|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000535965.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000577128.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein 	ENST00000573158.1|FN3KRP|ENSG00000141560.10|fructosamine 3 kinase related protein
hg19_v2_chr14_-_74551172_74551196	0.147085	NKX3-1	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr10_+_135204338_135204338	0.143964	NKX3-1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr20_-_34330129_34330234	0.142978	NKX3-1	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr7_+_110731062_110731155	0.140035	NKX3-1	ENST00000308478.5|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000451085.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000422987.3|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000421101.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3
hg19_v2_chr21_-_46964306_46964332	0.139344	NKX3-1	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr16_+_56969284_56969314	0.139148	NKX3-1	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr4_+_88529681_88529681	0.139014	NKX3-1	ENST00000399271.1|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr3_+_132316081_132316102	0.138747	NKX3-1	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr1_+_171217622_171217676	0.138192	NKX3-1	ENST00000433267.1|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1 	ENST00000367750.3|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chrX_+_13671225_13671327	0.129895	NKX3-1	ENST00000545566.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000544987.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000314720.4|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing
hg19_v2_chr7_-_138794394_138794473	0.128509	NKX3-1	ENST00000242351.5|ZC3HAV1|ENSG00000105939.8|zinc finger CCCH-type, antiviral 1 	ENST00000471652.1|ZC3HAV1|ENSG00000105939.8|zinc finger CCCH-type, antiviral 1
hg19_v2_chr11_+_67798363_67798433	0.126046	NKX3-1	ENST00000525628.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr9_-_104145795_104145806	0.117371	NKX3-1	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr2_-_187367356_187367356	0.116198	NKX3-1	ENST00000595956.1|AC018867.2|ENSG00000268846.1|AC018867.2
hg19_v2_chr1_-_160232197_160232284	0.11038	NKX3-1	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr11_+_7506713_7506773	0.105601	NKX3-1	ENST00000329293.3|OLFML1|ENSG00000183801.3|olfactomedin-like 1 	ENST00000534244.1|OLFML1|ENSG00000183801.3|olfactomedin-like 1
hg19_v2_chr11_+_9482551_9482604	0.101676	NKX3-1	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr7_-_112430647_112430776	0.0962788	NKX3-1	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr10_-_28571015_28571067	0.0937506	NKX3-1	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr1_-_160232291_160232304	0.0921109	NKX3-1	ENST00000368074.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000447377.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr19_-_14889349_14889381	0.0920075	NKX3-1	ENST00000315576.3|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000392967.2|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000346057.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353876.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2 	ENST00000353005.1|EMR2|ENSG00000127507.13|egf-like module containing, mucin-like, hormone receptor-like 2
hg19_v2_chr1_+_151372010_151372055	0.0910447	NKX3-1	ENST00000290541.6|PSMB4|ENSG00000159377.6|proteasome (prosome, macropain) subunit, beta type, 4
hg19_v2_chr7_+_141463897_141463897	0.0907183	NKX3-1	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr1_+_158323486_158323540	0.0903022	NKX3-1	ENST00000444681.2|CD1E|ENSG00000158488.11|CD1e molecule 	ENST00000368167.3|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chr12_+_4829507_4829601	0.0885676	NKX3-1	ENST00000252318.2|GALNT8|ENSG00000130035.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg19_v2_chr12_+_81110684_81110700	0.0828319	NKX3-1	ENST00000228644.3|MYF5|ENSG00000111049.3|myogenic factor 5
hg19_v2_chr14_-_65409502_65409531	0.0819891	NKX3-1	ENST00000389614.5|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr2_+_216974020_216974091	0.0783595	NKX3-1	ENST00000392132.2|XRCC5|ENSG00000079246.11|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 	ENST00000417391.1|XRCC5|ENSG00000079246.11|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
hg19_v2_chr16_-_21436459_21436643	0.0735493	NKX3-1	ENST00000448012.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000504841.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000419180.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr19_-_55791563_55791749	0.0731498	NKX3-1	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_-_69373396_69373570	0.0646542	NKX3-1	ENST00000562595.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000562081.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000306875.4|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8
hg19_v2_chr13_+_27998681_27998826	0.0632891	NKX3-1	ENST00000381140.4|GTF3A|ENSG00000122034.8|general transcription factor IIIA
hg19_v2_chrX_-_38186775_38186802	0.0615945	NKX3-1	ENST00000339363.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000309513.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000338898.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000342811.3|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator 	ENST00000378505.2|RPGR|ENSG00000156313.8|retinitis pigmentosa GTPase regulator
hg19_v2_chr6_+_52930237_52930257	0.060184	NKX3-1	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr15_-_31393910_31393936	0.0584348	NKX3-1	ENST00000397795.2|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000256552.6|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000559179.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr12_-_4553385_4553385	0.054539	NKX3-1	ENST00000543077.1|FGF6|ENSG00000111241.2|fibroblast growth factor 6
hg19_v2_chr8_-_97247759_97247862	0.0528478	NKX3-1	ENST00000518406.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000523920.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000287022.5|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein
hg19_v2_chr16_+_69373323_69373371	0.0495264	NKX3-1	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr5_+_64920826_64920891	0.0484746	NKX3-1	ENST00000438419.2|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000231526.4|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000505553.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000545191.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13
hg19_v2_chr22_-_50523760_50523787	0.04206	NKX3-1	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr12_-_57039739_57039798	0.0403597	NKX3-1	ENST00000552959.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000551020.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000553007.2|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552919.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552104.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000262030.3|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr17_-_34257731_34257766	0.0379584	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr12_-_54978086_54978100	0.0370425	NKX3-1	ENST00000553113.1|PPP1R1A|ENSG00000135447.12|protein phosphatase 1, regulatory (inhibitor) subunit 1A
hg19_v2_chr7_+_100303676_100303719	0.0339887	NKX3-1	ENST00000303151.4|POP7|ENSG00000172336.4|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr12_+_12966250_12966302	0.0337369	NKX3-1	ENST00000352940.4|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000358007.3|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000544400.1|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
hg19_v2_chr12_-_125398850_125399198	0.0334342	NKX3-1	ENST00000535859.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546271.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540700.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000546120.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr12_+_113229452_113229461	0.0317507	NKX3-1	ENST00000389385.4|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr11_-_71823715_71823792	0.0306605	NKX3-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr11_-_101454234_101454255	0.0293054	NKX3-1	ENST00000348423.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000360497.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000532133.1|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr9_+_117350009_117350111	0.0241608	NKX3-1	ENST00000374050.3|ATP6V1G1|ENSG00000136888.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v2_chr11_-_71823796_71823826	0.019848	NKX3-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr1_+_171217677_171217703	0.0188696	NKX3-1	ENST00000402921.2|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr1_-_35497506_35497574	0.0179831	NKX3-1	ENST00000317538.5|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000373340.2|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6 	ENST00000357182.4|ZMYM6|ENSG00000163867.12|zinc finger, MYM-type 6
hg19_v2_chr4_+_159131630_159131647	0.01752	NKX3-1	ENST00000504569.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000509278.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000514558.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000503200.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr11_+_8040739_8040815	0.0148779	NKX3-1	ENST00000534099.1|TUB|ENSG00000166402.4|tubby bipartite transcription factor
hg19_v2_chr6_+_42928485_42928496	0.0137269	NKX3-1	ENST00000372808.3|GNMT|ENSG00000124713.5|glycine N-methyltransferase
hg19_v2_chr1_+_173793641_173793739	0.013246	NKX3-1	ENST00000361951.4|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr17_+_7358889_7358913	0.00873709	NKX3-1	ENST00000575379.1|CHRNB1|ENSG00000170175.6|cholinergic receptor, nicotinic, beta 1 (muscle)
hg19_v2_chr6_-_31648150_31648154	0.00844017	NKX3-1	ENST00000375858.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000383237.4|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chrX_-_102757802_102757810	0.00631726	NKX3-1	ENST00000372633.1|RAB40A|ENSG00000172476.3|RAB40A, member RAS oncogene family
hg19_v2_chr19_-_55791431_55791508	0.00320207	NKX3-1	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_+_89628778_89628803	0.00264635	NKX3-1	ENST00000472354.1|RPL13|ENSG00000167526.9|ribosomal protein L13
hg19_v2_chr8_-_16035454_16035497	0.00236119	NKX3-1	ENST00000355282.2|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
