hg19_v2_chr8_-_23261589_23261753	1.32978	PAX1_PAX9	ENST00000524168.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000523833.2|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000519243.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000389131.3|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr4_+_123747834_123747863	0.849518	PAX1_PAX9	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr2_-_175712270_175712316	0.785018	PAX1_PAX9	ENST00000295497.7|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000444394.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr8_-_101965559_101965570	0.784916	PAX1_PAX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr4_+_75230853_75230871	0.769655	PAX1_PAX9	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr4_+_123747979_123747994	0.663578	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr18_+_39766626_39766668	0.656926	PAX1_PAX9	ENST00000593234.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585627.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591199.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000586990.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593051.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593316.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591381.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585639.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000589068.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907
hg19_v2_chrX_-_153707545_153707596	0.632226	PAX1_PAX9	ENST00000357360.4|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr9_+_33750515_33750648	0.575875	PAX1_PAX9	ENST00000361005.5|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr9_+_33750667_33750819	0.559616	PAX1_PAX9	ENST00000457896.1|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000342836.4|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000429677.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chrX_-_153707246_153707306	0.553273	PAX1_PAX9	ENST00000407062.1|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr8_-_101965146_101965236	0.487648	PAX1_PAX9	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr9_+_33795533_33795562	0.426234	PAX1_PAX9	ENST00000379405.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr7_-_19157248_19157295	0.403276	PAX1_PAX9	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr17_+_15848231_15848231	0.385429	PAX1_PAX9	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr9_-_104249400_104249512	0.292429	PAX1_PAX9	ENST00000374848.3|TMEM246|ENSG00000165152.4|transmembrane protein 246
hg19_v2_chr8_+_84824920_84824948	0.278119	PAX1_PAX9	ENST00000523678.1|RP11-120I21.2|ENSG00000254202.1|RP11-120I21.2
hg19_v2_chr6_+_34857019_34857117	0.258604	PAX1_PAX9	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr15_+_63569731_63569783	0.209319	PAX1_PAX9	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr11_+_6947720_6947812	0.194153	PAX1_PAX9	ENST00000414517.2|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr15_+_63569785_63569824	0.172681	PAX1_PAX9	ENST00000380343.4|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit 	ENST00000560353.1|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chrX_-_148669116_148669116	0.171715	PAX1_PAX9	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chr1_-_213031418_213031449	0.171102	PAX1_PAX9	ENST00000356684.3|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head) 	ENST00000426161.1|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head) 	ENST00000424044.1|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head)
hg19_v2_chr13_+_21141270_21141349	0.162535	PAX1_PAX9	ENST00000319980.6|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000537103.1|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000389373.3|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chr6_+_74104471_74104528	0.159253	PAX1_PAX9	ENST00000370336.4|DDX43|ENSG00000080007.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
hg19_v2_chr17_-_39968406_39968451	0.145423	PAX1_PAX9	ENST00000393928.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr14_+_24540046_24540132	0.125688	PAX1_PAX9	ENST00000397016.2|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000537691.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000560356.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000558450.1|CPNE6|ENSG00000100884.5|copine VI (neuronal)
hg19_v2_chr6_-_132945414_132945414	0.123181	PAX1_PAX9	ENST00000367931.1|TAAR2|ENSG00000146378.5|trace amine associated receptor 2 	ENST00000537809.1|TAAR2|ENSG00000146378.5|trace amine associated receptor 2
hg19_v2_chr9_-_21142144_21142144	0.12285	PAX1_PAX9	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr13_+_21141208_21141265	0.121566	PAX1_PAX9	ENST00000351808.5|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chrX_+_148622513_148622612	0.114773	PAX1_PAX9	ENST00000393985.3|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423421.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423540.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000434353.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000514208.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A
hg19_v2_chr1_+_26758790_26758847	0.111049	PAX1_PAX9	ENST00000427245.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525682.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000236342.7|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000526219.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000374185.3|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000360009.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr7_+_142457315_142457330	0.11061	PAX1_PAX9	ENST00000486171.1|PRSS1|ENSG00000204983.8|protease, serine, 1 (trypsin 1) 	ENST00000311737.7|PRSS1|ENSG00000204983.8|protease, serine, 1 (trypsin 1)
hg19_v2_chr11_+_6947647_6947698	0.104239	PAX1_PAX9	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr19_-_40791302_40791443	0.0989758	PAX1_PAX9	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr3_+_15247686_15247784	0.0776252	PAX1_PAX9	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr19_-_40791211_40791269	0.0696607	PAX1_PAX9	ENST00000579047.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr3_+_127771212_127771316	0.0620415	PAX1_PAX9	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr12_-_101801505_101801598	0.0578184	PAX1_PAX9	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr12_+_57828521_57828543	0.0470111	PAX1_PAX9	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr10_-_99393242_99393344	0.0438466	PAX1_PAX9	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr17_-_39968855_39968880	0.0423168	PAX1_PAX9	ENST00000355468.3|LEPREL4|ENSG00000141696.8|leprecan-like 4 	ENST00000590496.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr2_+_119699864_119699905	0.0417273	PAX1_PAX9	ENST00000541757.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure 	ENST00000412481.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chr10_-_43904608_43904640	0.0353944	PAX1_PAX9	ENST00000337970.3|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr22_+_39745930_39746012	0.0346553	PAX1_PAX9	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr19_-_5838768_5838836	0.032101	PAX1_PAX9	ENST00000527106.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000531199.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000529165.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr14_+_39703112_39703135	0.0294986	PAX1_PAX9	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr6_-_137366163_137366298	0.0292012	PAX1_PAX9	ENST00000367748.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr10_-_99393208_99393237	0.00857248	PAX1_PAX9	ENST00000307450.6|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr4_+_619347_619382	0.00528852	PAX1_PAX9	ENST00000255622.6|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
