hg19_v2_chr10_+_70847852_70847874	2.91994	PAX8	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chrX_-_151938171_151938240	2.70357	PAX8	ENST00000393902.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000417212.1|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3 	ENST00000370278.3|MAGEA3|ENSG00000221867.4|melanoma antigen family A, 3
hg19_v2_chr6_+_135502408_135502459	2.34264	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr6_+_135502466_135502489	2.2973	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr15_-_35088340_35088340	2.25881	PAX8	ENST00000290378.4|ACTC1|ENSG00000159251.6|actin, alpha, cardiac muscle 1
hg19_v2_chrX_+_151867214_151867284	1.77656	PAX8	ENST00000329342.5|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000412733.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6 	ENST00000457643.1|MAGEA6|ENSG00000197172.6|melanoma antigen family A, 6
hg19_v2_chr1_-_27952741_27952753	1.73479	PAX8	ENST00000399173.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr19_-_7766991_7767038	1.52658	PAX8	ENST00000597921.1|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23) 	ENST00000346664.5|FCER2|ENSG00000104921.10|Fc fragment of IgE, low affinity II, receptor for (CD23)
hg19_v2_chrX_-_151903184_151903211	1.38246	PAX8	ENST00000357916.4|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12 	ENST00000393869.3|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12
hg19_v2_chr11_+_60223225_60223297	1.37819	PAX8	ENST00000524807.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000345732.4|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chr11_+_60223312_60223353	1.3774	PAX8	ENST00000532491.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000532073.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000534668.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000528313.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1 	ENST00000533306.1|MS4A1|ENSG00000156738.13|membrane-spanning 4-domains, subfamily A, member 1
hg19_v2_chrX_+_151903207_151903234	1.3589	PAX8	ENST00000370287.3|CSAG1|ENSG00000198930.8|chondrosarcoma associated gene 1
hg19_v2_chr14_-_106054659_106054732	1.34656	PAX8	ENST00000390539.2|IGHA2|ENSG00000211890.3|immunoglobulin heavy constant alpha 2 (A2m marker)
hg19_v2_chr4_-_145061788_145061904	1.25894	PAX8	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr10_+_35484793_35484937	1.13868	PAX8	ENST00000488741.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000474931.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000468236.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000344351.5|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000490511.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr7_-_144533074_144533153	1.03868	PAX8	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr1_+_160709029_160709047	1.02168	PAX8	ENST00000444090.2|SLAMF7|ENSG00000026751.12|SLAM family member 7 	ENST00000441662.2|SLAMF7|ENSG00000026751.12|SLAM family member 7
hg19_v2_chr11_+_7618413_7618427	1.00863	PAX8	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr2_-_211179883_211179914	0.995694	PAX8	ENST00000352451.3|MYL1|ENSG00000168530.11|myosin, light chain 1, alkali; skeletal, fast
hg19_v2_chr3_-_8811288_8811314	0.99191	PAX8	ENST00000316793.3|OXTR|ENSG00000180914.6|oxytocin receptor 	ENST00000431493.1|OXTR|ENSG00000180914.6|oxytocin receptor
hg19_v2_chr6_+_135502501_135502652	0.972367	PAX8	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr2_-_179672142_179672157	0.970442	PAX8	ENST00000342992.6|TTN|ENSG00000155657.19|titin 	ENST00000360870.5|TTN|ENSG00000155657.19|titin 	ENST00000460472.2|TTN|ENSG00000155657.19|titin 	ENST00000589042.1|TTN|ENSG00000155657.19|titin 	ENST00000591111.1|TTN|ENSG00000155657.19|titin 	ENST00000342175.6|TTN|ENSG00000155657.19|titin 	ENST00000359218.5|TTN|ENSG00000155657.19|titin
hg19_v2_chr6_+_14117872_14118012	0.957769	PAX8	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chrX_+_151883090_151883174	0.94657	PAX8	ENST00000370293.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000423993.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000447530.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000458057.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000331220.2|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000422085.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000453150.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B 	ENST00000409560.1|MAGEA2B|ENSG00000183305.9|melanoma antigen family A, 2B
hg19_v2_chr7_+_7606497_7606595	0.922844	PAX8	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr3_-_141719195_141719215	0.908485	PAX8	ENST00000397991.4|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr1_-_184006829_184006911	0.888159	PAX8	ENST00000361927.4|COLGALT2|ENSG00000198756.6|collagen beta(1-O)galactosyltransferase 2
hg19_v2_chr1_-_25256368_25256476	0.884588	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr6_-_44233361_44233500	0.879099	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr1_-_119682812_119682947	0.858128	PAX8	ENST00000537870.1|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr11_+_117857063_117857121	0.855879	PAX8	ENST00000227752.3|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000541785.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000545409.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha
hg19_v2_chr13_+_31309645_31309726	0.828265	PAX8	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chr13_+_51483814_51483935	0.824613	PAX8	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr4_-_144826682_144826716	0.803184	PAX8	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr1_-_119683251_119683298	0.765413	PAX8	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr7_-_97501706_97501727	0.763378	PAX8	ENST00000455086.1|ASNS|ENSG00000070669.12|asparagine synthetase (glutamine-hydrolyzing) 	ENST00000453600.1|ASNS|ENSG00000070669.12|asparagine synthetase (glutamine-hydrolyzing)
hg19_v2_chr5_+_43603229_43603356	0.731274	PAX8	ENST00000344920.4|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase 	ENST00000512996.2|NNT|ENSG00000112992.12|nicotinamide nucleotide transhydrogenase
hg19_v2_chr21_-_43816052_43816116	0.692346	PAX8	ENST00000398405.1|TMPRSS3|ENSG00000160183.9|transmembrane protease, serine 3
hg19_v2_chr7_+_107531580_107531647	0.665507	PAX8	ENST00000537148.1|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase 	ENST00000440410.1|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase 	ENST00000437604.2|DLD|ENSG00000091140.8|dihydrolipoamide dehydrogenase
hg19_v2_chr1_-_182573514_182573543	0.656499	PAX8	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr6_-_32784687_32784839	0.648359	PAX8	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr12_+_26348582_26348606	0.645096	PAX8	ENST00000535504.1|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr3_+_121796697_121796750	0.632292	PAX8	ENST00000482356.1|CD86|ENSG00000114013.11|CD86 molecule 	ENST00000393627.2|CD86|ENSG00000114013.11|CD86 molecule
hg19_v2_chr1_-_222763240_222763284	0.620159	PAX8	ENST00000352967.4|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000391882.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 	ENST00000543857.1|TAF1A|ENSG00000143498.13|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
hg19_v2_chr1_+_15943995_15944014	0.61972	PAX8	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr9_-_128246769_128246780	0.611613	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr16_-_87350970_87351006	0.601768	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chr7_+_75677354_75677459	0.588551	PAX8	ENST00000461263.2|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000315758.5|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000443006.1|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial)
hg19_v2_chr10_+_12391685_12391734	0.587328	PAX8	ENST00000378845.1|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr12_-_54652060_54652211	0.578111	PAX8	ENST00000552562.1|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr17_+_1665345_1665406	0.571563	PAX8	ENST00000576406.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 	ENST00000571149.1|SERPINF1|ENSG00000132386.6|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
hg19_v2_chr11_+_7626950_7626971	0.569203	PAX8	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr2_-_128615681_128615737	0.563834	PAX8	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr1_+_100818156_100818210	0.559623	PAX8	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr18_-_53068911_53068935	0.553361	PAX8	ENST00000537856.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr11_-_47869865_47869914	0.544707	PAX8	ENST00000530326.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa 	ENST00000532747.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chrX_-_23926004_23926072	0.535772	PAX8	ENST00000379226.4|APOO|ENSG00000184831.9|apolipoprotein O 	ENST00000379220.3|APOO|ENSG00000184831.9|apolipoprotein O
hg19_v2_chr2_-_234763147_234763212	0.525724	PAX8	ENST00000411486.2|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000432087.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000441687.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein 	ENST00000414924.1|HJURP|ENSG00000123485.7|Holliday junction recognition protein
hg19_v2_chr1_-_71513471_71513506	0.522668	PAX8	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr2_+_90198535_90198535	0.517294	PAX8	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chrX_+_129535937_129535994	0.498885	PAX8	ENST00000305536.6|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2 	ENST00000370947.1|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2
hg19_v2_chr15_+_89631647_89631725	0.483319	PAX8	ENST00000569550.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565066.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2 	ENST00000565973.1|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr8_+_124429006_124429076	0.482104	PAX8	ENST00000522194.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523356.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr2_-_152590982_152591001	0.481223	PAX8	ENST00000409198.1|NEB|ENSG00000183091.15|nebulin 	ENST00000397345.3|NEB|ENSG00000183091.15|nebulin 	ENST00000427231.2|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr12_-_6960407_6960464	0.477237	PAX8	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr19_-_51538148_51538203	0.474909	PAX8	ENST00000319590.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12 	ENST00000250351.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr19_-_51538118_51538134	0.473184	PAX8	ENST00000529888.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr11_-_62457371_62457371	0.467406	PAX8	ENST00000317449.4|LRRN4CL|ENSG00000177363.4|LRRN4 C-terminal like
hg19_v2_chr14_-_23288930_23289020	0.460744	PAX8	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr11_-_47870019_47870033	0.454709	PAX8	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr11_-_62609281_62609282	0.451245	PAX8	ENST00000525239.1|WDR74|ENSG00000133316.11|WD repeat domain 74 	ENST00000538098.2|WDR74|ENSG00000133316.11|WD repeat domain 74
hg19_v2_chr6_-_27858570_27858611	0.435343	PAX8	ENST00000359303.2|HIST1H3J|ENSG00000197153.3|histone cluster 1, H3j
hg19_v2_chr12_-_56236734_56236788	0.434085	PAX8	ENST00000548629.1|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chr11_-_47870091_47870121	0.424585	PAX8	ENST00000526870.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr15_-_89010607_89010650	0.404735	PAX8	ENST00000312475.4|MRPL46|ENSG00000259494.1|mitochondrial ribosomal protein L46
hg19_v2_chr10_-_43892668_43892794	0.393936	PAX8	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr2_-_152590946_152590960	0.380672	PAX8	ENST00000172853.10|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr5_-_176943917_176943943	0.372975	PAX8	ENST00000330503.7|DDX41|ENSG00000183258.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
hg19_v2_chr9_-_134955246_134955295	0.358313	PAX8	ENST00000357028.2|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000474263.1|MED27|ENSG00000160563.9|mediator complex subunit 27 	ENST00000292035.5|MED27|ENSG00000160563.9|mediator complex subunit 27
hg19_v2_chrX_-_71458802_71458897	0.355132	PAX8	ENST00000373657.1|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like 	ENST00000334463.3|ERCC6L|ENSG00000186871.5|excision repair cross-complementing rodent repair deficiency, complementation group 6-like
hg19_v2_chr4_-_152682129_152682175	0.354543	PAX8	ENST00000512306.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000508611.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000515812.1|PET112|ENSG00000059691.7|PET112 homolog (yeast) 	ENST00000263985.6|PET112|ENSG00000059691.7|PET112 homolog (yeast)
hg19_v2_chr5_-_140027357_140027370	0.332431	PAX8	ENST00000252102.4|NDUFA2|ENSG00000131495.4|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
hg19_v2_chr12_+_53689309_53689366	0.331991	PAX8	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr14_+_75230011_75230120	0.327429	PAX8	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr4_-_46911223_46911230	0.32313	PAX8	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr1_+_182419261_182419285	0.314965	PAX8	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr7_+_140396465_140396548	0.314488	PAX8	ENST00000476279.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000247866.4|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000461457.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000465506.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000204307.5|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000464566.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr2_-_84686552_84686624	0.31439	PAX8	ENST00000393868.2|SUCLG1|ENSG00000163541.7|succinate-CoA ligase, alpha subunit
hg19_v2_chr11_-_2170786_2170833	0.313861	PAX8	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr18_-_29264467_29264551	0.313151	PAX8	ENST00000383131.3|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 	ENST00000237019.7|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr18_-_29264669_29264717	0.310373	PAX8	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr4_+_123747834_123747863	0.306692	PAX8	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr13_-_103426112_103426164	0.306691	PAX8	ENST00000376032.4|TEX30|ENSG00000151287.12|testis expressed 30 	ENST00000376029.3|TEX30|ENSG00000151287.12|testis expressed 30
hg19_v2_chr13_-_107214291_107214305	0.301389	PAX8	ENST00000375926.1|ARGLU1|ENSG00000134884.9|arginine and glutamate rich 1
hg19_v2_chr17_+_30771279_30771536	0.294971	PAX8	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chr1_+_40915725_40915808	0.289758	PAX8	ENST00000484445.1|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000411995.2|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B 	ENST00000361584.3|ZFP69B|ENSG00000187801.10|ZFP69 zinc finger protein B
hg19_v2_chr19_+_12862604_12862625	0.287267	PAX8	ENST00000553030.1|BEST2|ENSG00000039987.2|bestrophin 2
hg19_v2_chr19_-_52133588_52133588	0.278123	PAX8	ENST00000570106.2|SIGLEC5|ENSG00000105501.7|sialic acid binding Ig-like lectin 5
hg19_v2_chr12_-_6961050_6961230	0.269555	PAX8	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr22_+_22730353_22730360	0.264632	PAX8	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chr10_+_17686124_17686192	0.260996	PAX8	ENST00000377524.3|STAM|ENSG00000136738.10|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
hg19_v2_chr3_-_137851220_137851236	0.255182	PAX8	ENST00000236709.3|A4GNT|ENSG00000118017.3|alpha-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr12_-_57410304_57410325	0.245045	PAX8	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr19_-_55791431_55791508	0.243725	PAX8	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr5_-_133510456_133510499	0.242801	PAX8	ENST00000520417.1|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr15_+_89631381_89631391	0.242589	PAX8	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr9_-_21228221_21228221	0.241369	PAX8	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr4_-_168155169_168155214	0.234336	PAX8	ENST00000534949.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000535728.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr1_+_159409512_159409512	0.231175	PAX8	ENST00000423932.3|OR10J1|ENSG00000196184.7|olfactory receptor, family 10, subfamily J, member 1
hg19_v2_chr6_-_31628512_31628566	0.231059	PAX8	ENST00000375911.1|C6orf47|ENSG00000204439.3|chromosome 6 open reading frame 47
hg19_v2_chr19_-_55791540_55791549	0.228316	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr2_+_169312350_169312372	0.227593	PAX8	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr2_+_90248739_90248739	0.225934	PAX8	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr2_+_191334212_191334242	0.223066	PAX8	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr7_+_107384142_107384173	0.221638	PAX8	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr5_+_69321074_69321200	0.217466	PAX8	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr15_-_43785303_43785369	0.215902	PAX8	ENST00000382039.3|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000450115.2|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000382044.4|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr9_-_21239978_21239978	0.215802	PAX8	ENST00000380222.2|IFNA14|ENSG00000228083.1|interferon, alpha 14
hg19_v2_chr2_+_90192768_90192768	0.214703	PAX8	ENST00000390275.2|IGKV1D-13|ENSG00000211630.2|immunoglobulin kappa variable 1D-13
hg19_v2_chrX_+_99839799_99839938	0.213789	PAX8	ENST00000373031.4|TNMD|ENSG00000000005.5|tenomodulin
hg19_v2_chr1_-_173176452_173176477	0.208875	PAX8	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr14_-_107114267_107114277	0.206894	PAX8	ENST00000454421.2|IGHV3-64|ENSG00000223648.2|immunoglobulin heavy variable 3-64
hg19_v2_chr2_+_161993465_161993481	0.205128	PAX8	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr17_-_44439084_44439130	0.201844	PAX8	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr14_+_22931924_22931924	0.196395	PAX8	ENST00000390477.2|TRDC|ENSG00000211829.2|T cell receptor delta constant
hg19_v2_chr15_-_38519066_38519111	0.195911	PAX8	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chr11_+_17281900_17281906	0.191761	PAX8	ENST00000530527.1|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr17_-_44657017_44657088	0.19048	PAX8	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr8_-_66546439_66546451	0.189097	PAX8	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr8_+_27168988_27169021	0.185944	PAX8	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr9_-_98269481_98269691	0.183597	PAX8	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr19_-_51537982_51537997	0.182647	PAX8	ENST00000525263.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr5_+_140027355_140027476	0.180688	PAX8	ENST00000417647.2|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II 	ENST00000507593.1|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II 	ENST00000508301.1|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II
hg19_v2_chr3_+_190105909_190105966	0.179026	PAX8	ENST00000456423.1|CLDN16|ENSG00000113946.3|claudin 16
hg19_v2_chr11_+_9482512_9482534	0.178162	PAX8	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr7_-_112430647_112430776	0.174594	PAX8	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr1_+_171227069_171227096	0.169774	PAX8	ENST00000354841.4|FMO1|ENSG00000010932.11|flavin containing monooxygenase 1
hg19_v2_chr2_-_79386786_79386886	0.169406	PAX8	ENST00000393878.1|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000305165.2|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha 	ENST00000409839.3|REG3A|ENSG00000172016.11|regenerating islet-derived 3 alpha
hg19_v2_chr7_+_140396756_140396804	0.165551	PAX8	ENST00000460088.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000472695.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr16_+_2083265_2083303	0.160771	PAX8	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr16_+_33006369_33006369	0.154384	PAX8	ENST00000425181.3|IGHV3OR16-10|ENSG00000233732.5|immunoglobulin heavy variable 3/OR16-10 (non-functional)
hg19_v2_chr2_+_219524473_219524495	0.148386	PAX8	ENST00000439945.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000431802.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr7_-_137686791_137686821	0.142968	PAX8	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr1_-_165668100_165668100	0.14258	PAX8	ENST00000354775.4|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr8_+_133787586_133787673	0.137927	PAX8	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr17_-_74023291_74023312	0.135094	PAX8	ENST00000586740.1|EVPL|ENSG00000167880.3|envoplakin
hg19_v2_chr22_-_44258360_44258402	0.132958	PAX8	ENST00000330884.4|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1 	ENST00000249130.5|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr12_-_50294033_50294044	0.132797	PAX8	ENST00000552669.1|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr16_-_20367584_20367628	0.131134	PAX8	ENST00000570689.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr19_-_55791563_55791749	0.127497	PAX8	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr19_-_7812446_7812473	0.122423	PAX8	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr11_+_107461948_107462009	0.120145	PAX8	ENST00000265840.7|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1 	ENST00000443271.2|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr7_+_95115210_95115217	0.119453	PAX8	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr3_-_127842612_127842680	0.119334	PAX8	ENST00000417360.1|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1 	ENST00000322623.5|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1
hg19_v2_chr6_+_72926145_72926245	0.118732	PAX8	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_197382957_197382964	0.116828	PAX8	ENST00000367397.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr3_-_49158312_49158373	0.113787	PAX8	ENST00000398892.3|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000453664.1|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19 	ENST00000398888.2|USP19|ENSG00000172046.14|ubiquitin specific peptidase 19
hg19_v2_chr19_+_782755_782833	0.112092	PAX8	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr22_-_31324215_31324215	0.111531	PAX8	ENST00000429468.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr19_-_7812397_7812426	0.109687	PAX8	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr8_-_21771182_21771208	0.107395	PAX8	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr17_+_67410832_67410871	0.100156	PAX8	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr19_+_17865011_17865123	0.0974604	PAX8	ENST00000596462.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596865.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598960.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000539407.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr22_-_32651326_32651340	0.0959077	PAX8	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr5_+_140235469_140235634	0.0934295	PAX8	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr19_-_40228657_40228674	0.0930223	PAX8	ENST00000221804.4|CLC|ENSG00000105205.6|Charcot-Leyden crystal galectin
hg19_v2_chr11_+_63742050_63742104	0.0876397	PAX8	ENST00000314133.3|COX8A|ENSG00000176340.3|cytochrome c oxidase subunit VIIIA (ubiquitous) 	ENST00000535431.1|AP000721.4|ENSG00000256100.1|Uncharacterized protein
hg19_v2_chr1_+_203734296_203734318	0.0821646	PAX8	ENST00000442561.2|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1 	ENST00000367217.5|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1
hg19_v2_chr17_+_7461613_7461645	0.0775788	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr12_-_56236690_56236706	0.0747696	PAX8	ENST00000322569.4|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chr7_+_140396946_140397024	0.0734023	PAX8	ENST00000476470.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 	ENST00000471136.1|NDUFB2|ENSG00000090266.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa
hg19_v2_chr7_-_142176790_142176842	0.0715694	PAX8	ENST00000390369.2|TRBV7-4|ENSG00000253409.1|T cell receptor beta variable 7-4 (gene/pseudogene)
hg19_v2_chr17_+_7461580_7461610	0.0670276	PAX8	ENST00000483039.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000396542.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr8_+_59323823_59323947	0.066947	PAX8	ENST00000399598.2|UBXN2B|ENSG00000215114.3|UBX domain protein 2B
hg19_v2_chr14_-_91710852_91710893	0.0612927	PAX8	ENST00000535815.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000529102.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr9_+_42704004_42704004	0.058324	PAX8	ENST00000457288.1|CBWD7|ENSG00000215126.6|COBW domain containing 7
hg19_v2_chr11_+_113185292_113185325	0.0561378	PAX8	ENST00000429951.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000442859.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000531164.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000529850.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000314756.3|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000525965.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12
hg19_v2_chr12_+_57828521_57828543	0.0499614	PAX8	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr11_+_64323156_64323165	0.046049	PAX8	ENST00000377585.3|SLC22A11|ENSG00000168065.11|solute carrier family 22 (organic anion/urate transporter), member 11
hg19_v2_chr12_-_86650045_86650076	0.0388695	PAX8	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr1_+_13359819_13359819	0.0326139	PAX8	ENST00000376168.1|PRAMEF5|ENSG00000204502.2|PRAME family member 5
hg19_v2_chr13_-_95131923_95131944	0.0288159	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr8_+_124428959_124428971	0.0283901	PAX8	ENST00000287387.2|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523984.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr2_-_87248975_87248975	0.0274448	PAX8	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chr9_+_131549610_131549629	0.0254243	PAX8	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr6_+_52285046_52285124	0.0252242	PAX8	ENST00000371068.5|EFHC1|ENSG00000096093.10|EF-hand domain (C-terminal) containing 1
hg19_v2_chr6_+_72922505_72922516	0.024224	PAX8	ENST00000401910.3|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr12_-_86650077_86650095	0.0240558	PAX8	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr22_+_23029188_23029205	0.0235307	PAX8	ENST00000390305.2|IGLV3-25|ENSG00000211659.2|immunoglobulin lambda variable 3-25
hg19_v2_chr6_+_30131318_30131462	0.0228807	PAX8	ENST00000376688.1|TRIM15|ENSG00000204610.8|tripartite motif containing 15
hg19_v2_chr17_-_19648916_19648993	0.0220728	PAX8	ENST00000444455.1|ALDH3A1|ENSG00000108602.13|aldehyde dehydrogenase 3 family, member A1 	ENST00000439102.2|ALDH3A1|ENSG00000108602.13|aldehyde dehydrogenase 3 family, member A1
hg19_v2_chr5_+_128300810_128300821	0.0203137	PAX8	ENST00000262462.4|SLC27A6|ENSG00000113396.8|solute carrier family 27 (fatty acid transporter), member 6
hg19_v2_chr2_+_171036635_171036673	0.0191469	PAX8	ENST00000484338.2|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000334231.6|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr4_+_156680153_156680242	0.0187959	PAX8	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr16_+_57496299_57496299	0.0151754	PAX8	ENST00000219252.5|POLR2C|ENSG00000102978.8|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
hg19_v2_chr18_-_58040000_58040015	0.00872389	PAX8	ENST00000299766.3|MC4R|ENSG00000166603.3|melanocortin 4 receptor
hg19_v2_chr4_+_71600144_71600159	0.00828688	PAX8	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr3_+_186435137_186435158	0.00824948	PAX8	ENST00000447445.1|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr17_-_42100474_42100589	0.00820855	PAX8	ENST00000585950.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000592127.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000589334.1|TMEM101|ENSG00000091947.5|transmembrane protein 101
hg19_v2_chr3_-_178969403_178969418	0.00428944	PAX8	ENST00000314235.5|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000392685.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chrM_+_4431_4475	0.00409752	PAX8	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
