hg19_v2_chr8_-_49833978_49833996	0.910491	UGAAAUG	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr5_+_82767284_82767310	0.819034	UGAAAUG	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr8_-_41166953_41167016	0.807986	UGAAAUG	ENST00000220772.3|SFRP1|ENSG00000104332.7|secreted frizzled-related protein 1
hg19_v2_chr2_-_227664474_227664508	0.701955	UGAAAUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr7_-_83824169_83824217	0.61946	UGAAAUG	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr12_-_76425368_76425384	0.530287	UGAAAUG	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr21_-_28338732_28338832	0.484284	UGAAAUG	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chrX_+_73641286_73641400	0.470605	UGAAAUG	ENST00000587091.1|SLC16A2|ENSG00000147100.5|solute carrier family 16, member 2 (thyroid hormone transporter)
hg19_v2_chr18_-_21977748_21977823	0.462097	UGAAAUG	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr7_-_87849340_87849395	0.460738	UGAAAUG	ENST00000419179.1|SRI|ENSG00000075142.9|sorcin 	ENST00000265729.2|SRI|ENSG00000075142.9|sorcin
hg19_v2_chr10_-_105845674_105845760	0.384486	UGAAAUG	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr8_-_18871159_18871201	0.378553	UGAAAUG	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr21_+_39628655_39628672	0.358475	UGAAAUG	ENST00000398925.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000398928.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000328656.4|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000443341.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr16_-_17564738_17564834	0.333741	UGAAAUG	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr7_-_41742697_41742714	0.323568	UGAAAUG	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr2_-_217560248_217560278	0.290323	UGAAAUG	ENST00000233813.4|IGFBP5|ENSG00000115461.4|insulin-like growth factor binding protein 5
hg19_v2_chr7_-_99006443_99006454	0.289824	UGAAAUG	ENST00000350498.3|PDAP1|ENSG00000106244.8|PDGFA associated protein 1
hg19_v2_chr21_-_39288743_39288765	0.286274	UGAAAUG	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr5_-_9546180_9546195	0.286236	UGAAAUG	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr6_+_71998506_71998522	0.281391	UGAAAUG	ENST00000370435.4|OGFRL1|ENSG00000119900.7|opioid growth factor receptor-like 1
hg19_v2_chr12_-_110318263_110318320	0.278503	UGAAAUG	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr1_+_178062855_178062903	0.274662	UGAAAUG	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr20_+_56884752_56884799	0.273727	UGAAAUG	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr10_+_112257596_112257634	0.272013	UGAAAUG	ENST00000369583.3|DUSP5|ENSG00000138166.5|dual specificity phosphatase 5
hg19_v2_chr18_+_42260861_42260882	0.271284	UGAAAUG	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr3_-_123304017_123304040	0.257157	UGAAAUG	ENST00000383657.5|PTPLB|ENSG00000206527.5|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
hg19_v2_chr1_-_52456352_52456436	0.251897	UGAAAUG	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr4_+_123747834_123747863	0.24772	UGAAAUG	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr12_-_109125285_109125372	0.24373	UGAAAUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr11_+_10471836_10471868	0.23941	UGAAAUG	ENST00000444303.2|AMPD3|ENSG00000133805.11|adenosine monophosphate deaminase 3
hg19_v2_chr5_-_39425068_39425098	0.231376	UGAAAUG	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr4_+_174089904_174089921	0.231004	UGAAAUG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr2_+_69969106_69969243	0.221379	UGAAAUG	ENST00000409920.1|ANXA4|ENSG00000196975.10|annexin A4 	ENST00000394295.4|ANXA4|ENSG00000196975.10|annexin A4 	ENST00000536030.1|ANXA4|ENSG00000196975.10|annexin A4
hg19_v2_chr18_+_54318616_54318640	0.220907	UGAAAUG	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr3_-_123603137_123603203	0.216115	UGAAAUG	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr10_+_52751010_52751118	0.208856	UGAAAUG	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr9_+_114659046_114659102	0.208667	UGAAAUG	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr14_+_85996471_85996497	0.202538	UGAAAUG	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr12_+_27485823_27485868	0.199792	UGAAAUG	ENST00000395901.2|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2 	ENST00000546179.1|ARNTL2|ENSG00000029153.10|aryl hydrocarbon receptor nuclear translocator-like 2
hg19_v2_chr6_-_57087042_57087128	0.198105	UGAAAUG	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr8_-_25315905_25315983	0.193831	UGAAAUG	ENST00000221200.4|KCTD9|ENSG00000104756.11|potassium channel tetramerization domain containing 9
hg19_v2_chr4_+_142557717_142557757	0.192328	UGAAAUG	ENST00000320650.4|IL15|ENSG00000164136.12|interleukin 15 	ENST00000296545.7|IL15|ENSG00000164136.12|interleukin 15
hg19_v2_chr1_-_201438282_201438365	0.18788	UGAAAUG	ENST00000367311.3|PHLDA3|ENSG00000174307.5|pleckstrin homology-like domain, family A, member 3 	ENST00000367309.1|PHLDA3|ENSG00000174307.5|pleckstrin homology-like domain, family A, member 3
hg19_v2_chr14_-_99737565_99737617	0.185254	UGAAAUG	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr4_+_55095264_55095390	0.184809	UGAAAUG	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr2_-_9770706_9770753	0.181244	UGAAAUG	ENST00000381844.4|YWHAQ|ENSG00000134308.9|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
hg19_v2_chr5_+_148521046_148521076	0.181059	UGAAAUG	ENST00000326685.7|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3 	ENST00000356541.3|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3 	ENST00000309868.7|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr15_+_92396920_92396987	0.175387	UGAAAUG	ENST00000318445.6|SLCO3A1|ENSG00000176463.9|solute carrier organic anion transporter family, member 3A1
hg19_v2_chr7_+_155089486_155089599	0.173523	UGAAAUG	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr6_+_146864829_146864881	0.173504	UGAAAUG	ENST00000367495.3|RAB32|ENSG00000118508.4|RAB32, member RAS oncogene family
hg19_v2_chr19_+_30433110_30433214	0.168147	UGAAAUG	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr4_+_38869410_38869437	0.159161	UGAAAUG	ENST00000358869.2|FAM114A1|ENSG00000197712.7|family with sequence similarity 114, member A1
hg19_v2_chr11_+_35639735_35639735	0.157445	UGAAAUG	ENST00000317811.4|FJX1|ENSG00000179431.5|four jointed box 1 (Drosophila)
hg19_v2_chr10_-_105677886_105677995	0.156085	UGAAAUG	ENST00000224950.3|OBFC1|ENSG00000107960.6|oligonucleotide/oligosaccharide-binding fold containing 1
hg19_v2_chr1_+_64239657_64239724	0.154821	UGAAAUG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr6_+_143772060_143772117	0.15357	UGAAAUG	ENST00000367591.4|PEX3|ENSG00000034693.10|peroxisomal biogenesis factor 3
hg19_v2_chr1_+_77333117_77333139	0.153519	UGAAAUG	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr11_+_13299186_13299432	0.153006	UGAAAUG	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr1_-_57045228_57045242	0.152369	UGAAAUG	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chrX_-_112084043_112084071	0.152117	UGAAAUG	ENST00000304758.1|AMOT|ENSG00000126016.9|angiomotin
hg19_v2_chr4_-_71705590_71705662	0.149224	UGAAAUG	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr5_+_49961727_49961740	0.146053	UGAAAUG	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr10_+_1095416_1095482	0.137409	UGAAAUG	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr18_+_22006580_22006614	0.135389	UGAAAUG	ENST00000284202.4|IMPACT|ENSG00000154059.5|impact RWD domain protein
hg19_v2_chr4_-_70826725_70826725	0.134557	UGAAAUG	ENST00000353151.3|CSN2|ENSG00000135222.6|casein beta
hg19_v2_chr5_-_148930960_148931013	0.133755	UGAAAUG	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr19_-_40791302_40791443	0.13309	UGAAAUG	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr1_+_213123915_213123955	0.131869	UGAAAUG	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr10_+_105036909_105036920	0.131048	UGAAAUG	ENST00000369849.4|INA|ENSG00000148798.5|internexin neuronal intermediate filament protein, alpha
hg19_v2_chr5_-_95297678_95297775	0.128951	UGAAAUG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr3_+_150321068_150321123	0.128252	UGAAAUG	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr2_+_148602058_148602185	0.126834	UGAAAUG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr17_-_29641104_29641130	0.125835	UGAAAUG	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr12_-_54673871_54673925	0.122144	UGAAAUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr11_-_65686586_65686597	0.122022	UGAAAUG	ENST00000438576.2|C11orf68|ENSG00000175573.6|chromosome 11 open reading frame 68
hg19_v2_chr10_+_20105157_20105184	0.120179	UGAAAUG	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr4_+_52709229_52709345	0.120165	UGAAAUG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr9_+_125133315_125133359	0.119552	UGAAAUG	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr4_+_148402069_148402099	0.11922	UGAAAUG	ENST00000358556.4|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000339690.5|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000511804.1|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000324300.5|EDNRA|ENSG00000151617.11|endothelin receptor type A
hg19_v2_chr4_+_75858290_75858305	0.113435	UGAAAUG	ENST00000513238.1|PARM1|ENSG00000169116.7|prostate androgen-regulated mucin-like protein 1
hg19_v2_chr12_+_67663056_67663067	0.108741	UGAAAUG	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr3_+_61547585_61547585	0.108306	UGAAAUG	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr9_+_32384617_32384709	0.107207	UGAAAUG	ENST00000379923.1|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000309951.6|ACO1|ENSG00000122729.14|aconitase 1, soluble 	ENST00000541043.1|ACO1|ENSG00000122729.14|aconitase 1, soluble
hg19_v2_chr2_+_46769798_46769867	0.105049	UGAAAUG	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr5_-_132299313_132299334	0.0973276	UGAAAUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr14_-_75643296_75643341	0.0940956	UGAAAUG	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr10_+_76586348_76586400	0.0926973	UGAAAUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr9_-_14314066_14314075	0.0923172	UGAAAUG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr8_-_119124045_119124097	0.0920023	UGAAAUG	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr9_-_27529726_27529827	0.0917553	UGAAAUG	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr8_+_95732095_95732159	0.0875039	UGAAAUG	ENST00000414645.2|DPY19L4|ENSG00000156162.12|dpy-19-like 4 (C. elegans)
hg19_v2_chr12_-_51477333_51477426	0.0872805	UGAAAUG	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr2_+_231577532_231577639	0.0868955	UGAAAUG	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr12_-_6580094_6580153	0.0864635	UGAAAUG	ENST00000361716.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr3_+_130569429_130569479	0.0845187	UGAAAUG	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr14_+_58666824_58666902	0.0839471	UGAAAUG	ENST00000254286.4|ACTR10|ENSG00000131966.9|actin-related protein 10 homolog (S. cerevisiae)
hg19_v2_chr11_-_106889250_106889264	0.0817848	UGAAAUG	ENST00000526355.2|GUCY1A2|ENSG00000152402.6|guanylate cyclase 1, soluble, alpha 2
hg19_v2_chr12_-_120687948_120687971	0.0796531	UGAAAUG	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr14_+_69865401_69865426	0.0781926	UGAAAUG	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr3_-_179754706_179754732	0.0781468	UGAAAUG	ENST00000465751.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like 	ENST00000467460.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr9_-_19786926_19786926	0.077441	UGAAAUG	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr4_+_155665123_155665158	0.0764014	UGAAAUG	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr3_-_178790057_178790072	0.0757395	UGAAAUG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr3_-_114790179_114790222	0.0741582	UGAAAUG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr11_+_34073195_34073266	0.0728747	UGAAAUG	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chr15_+_66679155_66679258	0.0728172	UGAAAUG	ENST00000307102.5|MAP2K1|ENSG00000169032.5|mitogen-activated protein kinase kinase 1
hg19_v2_chr1_+_19923454_19923561	0.0727774	UGAAAUG	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr7_+_17338239_17338262	0.0726157	UGAAAUG	ENST00000242057.4|AHR|ENSG00000106546.8|aryl hydrocarbon receptor
hg19_v2_chr11_-_130298888_130298888	0.0714095	UGAAAUG	ENST00000257359.6|ADAMTS8|ENSG00000134917.9|ADAM metallopeptidase with thrombospondin type 1 motif, 8
hg19_v2_chr11_-_117186946_117186981	0.0708157	UGAAAUG	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr10_-_79686284_79686527	0.0675164	UGAAAUG	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr4_-_185747188_185747273	0.0668873	UGAAAUG	ENST00000507295.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000504900.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000281455.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000454703.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr14_+_56585048_56585150	0.0661041	UGAAAUG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr6_-_132834184_132834337	0.0634266	UGAAAUG	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr17_-_5389477_5389537	0.0626752	UGAAAUG	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr1_+_86046433_86046453	0.061045	UGAAAUG	ENST00000451137.2|CYR61|ENSG00000142871.11|cysteine-rich, angiogenic inducer, 61
hg19_v2_chrX_+_64708615_64708615	0.060142	UGAAAUG	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr15_+_69591235_69591299	0.0594983	UGAAAUG	ENST00000395407.2|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V 	ENST00000558684.1|PAQR5|ENSG00000137819.9|progestin and adipoQ receptor family member V
hg19_v2_chr3_+_133293278_133293492	0.0572179	UGAAAUG	ENST00000508481.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000420115.2|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000504867.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000507408.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000511392.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse) 	ENST00000515421.1|CDV3|ENSG00000091527.11|CDV3 homolog (mouse)
hg19_v2_chr3_-_125094093_125094198	0.0560253	UGAAAUG	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr17_+_45727204_45727220	0.0557602	UGAAAUG	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr22_-_45636650_45636714	0.0553057	UGAAAUG	ENST00000336156.5|KIAA0930|ENSG00000100364.14|KIAA0930
hg19_v2_chr11_-_10562710_10562782	0.0551762	UGAAAUG	ENST00000528665.1|RNF141|ENSG00000110315.2|ring finger protein 141 	ENST00000265981.2|RNF141|ENSG00000110315.2|ring finger protein 141
hg19_v2_chr5_-_66492562_66492635	0.0536818	UGAAAUG	ENST00000256447.4|CD180|ENSG00000134061.4|CD180 molecule
hg19_v2_chr4_-_41216619_41216637	0.0536632	UGAAAUG	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr1_+_182992545_182992630	0.0533822	UGAAAUG	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr15_+_67358163_67358192	0.0533406	UGAAAUG	ENST00000327367.4|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chrX_-_106959631_106959775	0.0530566	UGAAAUG	ENST00000486554.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372390.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr12_-_102513843_102513908	0.0529067	UGAAAUG	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr20_+_6748311_6748352	0.0527611	UGAAAUG	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr7_-_14942944_14942997	0.0491112	UGAAAUG	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr1_+_26798955_26799010	0.0466911	UGAAAUG	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr20_-_49575081_49575092	0.0460972	UGAAAUG	ENST00000371588.5|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit 	ENST00000371582.4|DPM1|ENSG00000000419.8|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
hg19_v2_chr2_-_197036289_197036314	0.0448541	UGAAAUG	ENST00000263955.4|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr2_+_192542850_192542872	0.0436739	UGAAAUG	ENST00000410026.2|NABP1|ENSG00000173559.8|nucleic acid binding protein 1
hg19_v2_chr15_-_45670924_45670991	0.0423273	UGAAAUG	ENST00000396659.3|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr9_-_115818951_115819011	0.0421024	UGAAAUG	ENST00000553380.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein 	ENST00000374227.3|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr7_+_66386204_66386249	0.0414538	UGAAAUG	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr6_-_52859046_52859201	0.0411361	UGAAAUG	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr14_+_23775971_23776000	0.0406002	UGAAAUG	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr20_+_49126881_49126936	0.0398462	UGAAAUG	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr1_-_23670817_23670829	0.0387141	UGAAAUG	ENST00000478691.1|HNRNPR|ENSG00000125944.14|heterogeneous nuclear ribonucleoprotein R
hg19_v2_chr14_+_60715928_60716007	0.0380782	UGAAAUG	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr16_-_53737795_53737850	0.0377816	UGAAAUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr12_+_62654119_62654142	0.0370369	UGAAAUG	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr6_-_100912785_100912822	0.0352647	UGAAAUG	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr2_+_28974668_28974729	0.0330596	UGAAAUG	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr4_-_111119804_111119832	0.0329097	UGAAAUG	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_-_57678772_57678838	0.0327138	UGAAAUG	ENST00000311128.5|DENND6A|ENSG00000174839.8|DENN/MADD domain containing 6A
hg19_v2_chr1_+_117910047_117910131	0.0326626	UGAAAUG	ENST00000356554.3|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr10_-_735553_735683	0.0321824	UGAAAUG	ENST00000280886.6|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila) 	ENST00000423550.1|DIP2C|ENSG00000151240.11|DIP2 disco-interacting protein 2 homolog C (Drosophila)
hg19_v2_chr8_+_41386761_41386787	0.0308801	UGAAAUG	ENST00000523277.2|GINS4|ENSG00000147536.7|GINS complex subunit 4 (Sld5 homolog)
hg19_v2_chr9_+_107526443_107526477	0.0303118	UGAAAUG	ENST00000374762.3|NIPSNAP3B|ENSG00000165028.7|nipsnap homolog 3B (C. elegans)
hg19_v2_chr13_-_67804445_67804475	0.0298059	UGAAAUG	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr17_+_30677136_30677205	0.029671	UGAAAUG	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chrX_-_77395186_77395203	0.0291264	UGAAAUG	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr15_+_50716576_50716624	0.028436	UGAAAUG	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr13_-_21476900_21476949	0.0284155	UGAAAUG	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr3_-_15374033_15374136	0.0283507	UGAAAUG	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr1_-_203320617_203320617	0.0282914	UGAAAUG	ENST00000354955.4|FMOD|ENSG00000122176.10|fibromodulin
hg19_v2_chrX_-_41782249_41782287	0.0282737	UGAAAUG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr5_+_52083730_52083821	0.0282235	UGAAAUG	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr20_-_48099182_48099214	0.0281046	UGAAAUG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr10_-_120514720_120514758	0.0280619	UGAAAUG	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr16_+_11762270_11762344	0.0276661	UGAAAUG	ENST00000329565.5|SNN|ENSG00000184602.5|stannin
hg19_v2_chr17_+_45973516_45973618	0.0275927	UGAAAUG	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr1_+_113161778_113161820	0.02712	UGAAAUG	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr5_-_121413974_121413986	0.0259154	UGAAAUG	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr1_-_38019878_38019905	0.0259026	UGAAAUG	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr12_+_57984965_57985059	0.0257544	UGAAAUG	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr5_-_179719048_179719099	0.0254614	UGAAAUG	ENST00000523583.1|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9 	ENST00000393360.3|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9 	ENST00000455781.1|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9 	ENST00000347470.4|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9 	ENST00000452135.2|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9 	ENST00000343111.6|MAPK9|ENSG00000050748.13|mitogen-activated protein kinase 9
hg19_v2_chr1_+_224301787_224301836	0.0248915	UGAAAUG	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr1_+_181452678_181452716	0.0247667	UGAAAUG	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr11_-_46722117_46722183	0.0246722	UGAAAUG	ENST00000311956.4|ARHGAP1|ENSG00000175220.7|Rho GTPase activating protein 1
hg19_v2_chr7_-_42276612_42276782	0.0246372	UGAAAUG	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr15_+_79165151_79165218	0.0244302	UGAAAUG	ENST00000331268.5|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr15_-_42749711_42749754	0.02435	UGAAAUG	ENST00000565611.1|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000263805.4|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000565948.1|ZNF106|ENSG00000103994.12|zinc finger protein 106
hg19_v2_chr5_+_76506706_76506787	0.0235327	UGAAAUG	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chrX_+_153524024_153524157	0.0225517	UGAAAUG	ENST00000369915.3|TKTL1|ENSG00000007350.12|transketolase-like 1 	ENST00000217905.7|TKTL1|ENSG00000007350.12|transketolase-like 1
hg19_v2_chr3_+_139654018_139654039	0.0224062	UGAAAUG	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr9_+_37422663_37422743	0.0219579	UGAAAUG	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chr9_-_128003606_128003631	0.021661	UGAAAUG	ENST00000324460.6|HSPA5|ENSG00000044574.7|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v2_chr15_+_85923856_85923987	0.0211667	UGAAAUG	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr13_-_53422640_53422780	0.0209599	UGAAAUG	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr3_-_141868357_141868393	0.0208787	UGAAAUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr6_+_116892530_116892592	0.0205664	UGAAAUG	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr1_+_207070775_207070797	0.0204055	UGAAAUG	ENST00000391929.3|IL24|ENSG00000162892.11|interleukin 24 	ENST00000294984.2|IL24|ENSG00000162892.11|interleukin 24 	ENST00000367093.3|IL24|ENSG00000162892.11|interleukin 24
hg19_v2_chr12_+_53774423_53774658	0.0200572	UGAAAUG	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr10_-_98273668_98273688	0.0198358	UGAAAUG	ENST00000357947.3|TLL2|ENSG00000095587.8|tolloid-like 2
hg19_v2_chr1_+_112162381_112162431	0.0194658	UGAAAUG	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr14_+_79745746_79745762	0.0194498	UGAAAUG	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr14_-_74181106_74181128	0.0182829	UGAAAUG	ENST00000316836.3|PNMA1|ENSG00000176903.3|paraneoplastic Ma antigen 1
hg19_v2_chr12_+_72233487_72233563	0.0181722	UGAAAUG	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr3_-_194119083_194119083	0.0178889	UGAAAUG	ENST00000401815.1|GP5|ENSG00000178732.4|glycoprotein V (platelet)
hg19_v2_chrX_-_119603138_119603220	0.0173821	UGAAAUG	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr3_-_113465065_113465147	0.0164593	UGAAAUG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chrX_+_16804544_16804613	0.015255	UGAAAUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr15_+_27111510_27111644	0.0152271	UGAAAUG	ENST00000335625.5|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chr11_-_76091986_76092038	0.0143214	UGAAAUG	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr15_+_59063478_59063561	0.0137962	UGAAAUG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr6_-_55740352_55740362	0.0137486	UGAAAUG	ENST00000370830.3|BMP5|ENSG00000112175.6|bone morphogenetic protein 5
hg19_v2_chr20_+_33814457_33814506	0.0135832	UGAAAUG	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr3_-_171178157_171178225	0.0130557	UGAAAUG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr2_-_54087066_54087297	0.0128688	UGAAAUG	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr2_+_223725652_223725705	0.0126818	UGAAAUG	ENST00000357430.3|ACSL3|ENSG00000123983.9|acyl-CoA synthetase long-chain family member 3 	ENST00000392066.3|ACSL3|ENSG00000123983.9|acyl-CoA synthetase long-chain family member 3
hg19_v2_chr11_-_60674037_60674079	0.0125238	UGAAAUG	ENST00000541371.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19 	ENST00000227524.4|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr14_-_27066636_27066701	0.0114582	UGAAAUG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr2_+_46926048_46926095	0.0111951	UGAAAUG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr1_-_153935983_153936048	0.0110793	UGAAAUG	ENST00000537590.1|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1 	ENST00000356205.4|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1
hg19_v2_chr16_-_20911641_20911720	0.0108806	UGAAAUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr12_+_104458235_104458344	0.0108312	UGAAAUG	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr1_+_199996702_199996732	0.0105713	UGAAAUG	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr7_-_107204337_107204485	0.0104932	UGAAAUG	ENST00000605888.1|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5 	ENST00000347053.3|COG5|ENSG00000164597.9|component of oligomeric golgi complex 5
hg19_v2_chr10_-_121356007_121356147	0.0100314	UGAAAUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chrX_-_15872914_15873054	0.00965785	UGAAAUG	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr11_+_34642656_34642682	0.00913112	UGAAAUG	ENST00000257831.3|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000450654.2|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr4_+_146402925_146402957	0.0090277	UGAAAUG	ENST00000302085.4|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr17_-_39637392_39637404	0.00895944	UGAAAUG	ENST00000246639.2|KRT35|ENSG00000197079.4|keratin 35 	ENST00000393989.1|KRT35|ENSG00000197079.4|keratin 35
hg19_v2_chr2_+_45168875_45168916	0.00893476	UGAAAUG	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chrX_-_102942961_102943011	0.00888233	UGAAAUG	ENST00000434230.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000418819.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000360458.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr17_+_56315787_56315927	0.00791446	UGAAAUG	ENST00000262290.4|LPO|ENSG00000167419.6|lactoperoxidase 	ENST00000421678.2|LPO|ENSG00000167419.6|lactoperoxidase
hg19_v2_chr12_+_54891495_54891526	0.00789595	UGAAAUG	ENST00000293373.6|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chrX_+_44732757_44732860	0.00784017	UGAAAUG	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chrX_+_113818545_113818566	0.00747881	UGAAAUG	ENST00000371951.1|HTR2C|ENSG00000147246.5|5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled 	ENST00000276198.1|HTR2C|ENSG00000147246.5|5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled 	ENST00000371950.3|HTR2C|ENSG00000147246.5|5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
hg19_v2_chr21_+_34915337_34915397	0.00707081	UGAAAUG	ENST00000290239.6|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381692.2|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000300278.4|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381679.4|SON|ENSG00000159140.13|SON DNA binding protein
hg19_v2_chr1_-_85040090_85040168	0.00666133	UGAAAUG	ENST00000370630.5|CTBS|ENSG00000117151.8|chitobiase, di-N-acetyl-
hg19_v2_chr17_+_36508111_36508128	0.00629046	UGAAAUG	ENST00000331159.5|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7 	ENST00000577233.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr11_+_119076745_119076792	0.0062309	UGAAAUG	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr17_-_21117902_21117937	0.00587991	UGAAAUG	ENST00000317635.5|TMEM11|ENSG00000178307.5|transmembrane protein 11
hg19_v2_chr10_-_1779663_1779676	0.00532062	UGAAAUG	ENST00000381312.1|ADARB2|ENSG00000185736.11|adenosine deaminase, RNA-specific, B2 (non-functional)
hg19_v2_chr1_+_35734562_35734573	0.00526371	UGAAAUG	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr15_+_40987327_40987397	0.00455084	UGAAAUG	ENST00000423169.2|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000267868.3|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000557850.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000532743.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000382643.3|RAD51|ENSG00000051180.12|RAD51 recombinase
hg19_v2_chr12_+_32655048_32655108	0.00427944	UGAAAUG	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr14_+_57735614_57735629	0.00385639	UGAAAUG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chrX_+_147582130_147582147	0.00373807	UGAAAUG	ENST00000370460.2|AFF2|ENSG00000155966.9|AF4/FMR2 family, member 2 	ENST00000370457.5|AFF2|ENSG00000155966.9|AF4/FMR2 family, member 2
hg19_v2_chr9_-_13279589_13279629	0.00321604	UGAAAUG	ENST00000319217.7|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr12_+_62860581_62860629	0.00316332	UGAAAUG	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr12_-_117319236_117319252	0.00274823	UGAAAUG	ENST00000257572.5|HRK|ENSG00000135116.5|harakiri, BCL2 interacting protein (contains only BH3 domain)
hg19_v2_chr15_+_57210818_57210930	0.00258774	UGAAAUG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr5_-_139422654_139422898	0.00209304	UGAAAUG	ENST00000289409.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000358522.3|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000378238.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000289422.7|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000361474.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000545385.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000394770.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000541337.1|NRG2|ENSG00000158458.15|neuregulin 2
hg19_v2_chr12_+_124118366_124118392	0.00208253	UGAAAUG	ENST00000539994.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000538845.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000228955.7|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000543341.2|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa 	ENST00000536375.1|GTF2H3|ENSG00000111358.9|general transcription factor IIH, polypeptide 3, 34kDa
hg19_v2_chrX_+_46433193_46433237	0.0018815	UGAAAUG	ENST00000276055.3|CHST7|ENSG00000147119.3|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
hg19_v2_chr17_-_77770830_77770915	0.00154975	UGAAAUG	ENST00000269385.4|CBX8|ENSG00000141570.6|chromobox homolog 8
hg19_v2_chr18_+_49866496_49866548	0.00148499	UGAAAUG	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr10_-_27443155_27443288	0.00116314	UGAAAUG	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr15_-_79383102_79383127	0.000809619	UGAAAUG	ENST00000558480.2|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1 	ENST00000419573.3|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1
hg19_v2_chr6_-_157744531_157744633	0.000658943	UGAAAUG	ENST00000400788.4|TMEM242|ENSG00000215712.6|transmembrane protein 242 	ENST00000367144.4|TMEM242|ENSG00000215712.6|transmembrane protein 242
hg19_v2_chr3_-_52713729_52713784	0.000336564	UGAAAUG	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr19_-_17799008_17799122	0.000320033	UGAAAUG	ENST00000519716.2|UNC13A|ENSG00000130477.10|unc-13 homolog A (C. elegans)
