hg19_v2_chrX_+_64887512_64887537	0.104375	UGACCUA	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr1_+_101702417_101702481	0.0828206	UGACCUA	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr9_+_137533615_137533660	0.0463709	UGACCUA	ENST00000371817.3|COL5A1|ENSG00000130635.11|collagen, type V, alpha 1
hg19_v2_chrX_+_119737806_119737835	0.0434382	UGACCUA	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chr2_-_235405679_235405739	0.0418675	UGACCUA	ENST00000390645.2|ARL4C|ENSG00000188042.5|ADP-ribosylation factor-like 4C
hg19_v2_chr18_+_54318616_54318640	0.0379516	UGACCUA	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr8_+_42010464_42010662	0.0366748	UGACCUA	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr1_+_84543734_84543775	0.0357411	UGACCUA	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr1_+_233749739_233749761	0.0330044	UGACCUA	ENST00000366621.3|KCNK1|ENSG00000135750.10|potassium channel, subfamily K, member 1
hg19_v2_chr13_+_58206655_58206655	0.0328065	UGACCUA	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr1_+_150122034_150122170	0.0323729	UGACCUA	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr5_+_49961727_49961740	0.0297885	UGACCUA	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr1_+_63833261_63833282	0.0274984	UGACCUA	ENST00000371108.4|ALG6|ENSG00000088035.11|ALG6, alpha-1,3-glucosyltransferase
hg19_v2_chr1_+_181057638_181057692	0.0257978	UGACCUA	ENST00000367577.4|IER5|ENSG00000162783.8|immediate early response 5
hg19_v2_chr6_+_146864829_146864881	0.0235752	UGACCUA	ENST00000367495.3|RAB32|ENSG00000118508.4|RAB32, member RAS oncogene family
hg19_v2_chr20_-_36156125_36156250	0.0232901	UGACCUA	ENST00000397135.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein 	ENST00000397137.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr5_-_73937244_73937274	0.023129	UGACCUA	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr3_-_113465065_113465147	0.0220145	UGACCUA	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr13_-_21476900_21476949	0.0214483	UGACCUA	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr3_+_105085734_105085760	0.0200667	UGACCUA	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr3_-_160283348_160283376	0.0198613	UGACCUA	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr12_+_56137064_56137183	0.0197249	UGACCUA	ENST00000257868.5|GDF11|ENSG00000135414.5|growth differentiation factor 11 	ENST00000546799.1|GDF11|ENSG00000135414.5|growth differentiation factor 11
hg19_v2_chr14_+_57735614_57735629	0.0168709	UGACCUA	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr3_-_9291063_9291136	0.0168613	UGACCUA	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr8_+_48920960_48921011	0.0168599	UGACCUA	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr8_-_89339705_89339721	0.016318	UGACCUA	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr12_+_85673868_85673885	0.0150469	UGACCUA	ENST00000316824.3|ALX1|ENSG00000180318.3|ALX homeobox 1
hg19_v2_chr15_-_72410109_72410161	0.0137128	UGACCUA	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr20_-_58515344_58515366	0.0131067	UGACCUA	ENST00000370996.3|PPP1R3D|ENSG00000132825.5|protein phosphatase 1, regulatory subunit 3D
hg19_v2_chr14_+_73704201_73704277	0.0123903	UGACCUA	ENST00000340738.5|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein 	ENST00000427855.1|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein 	ENST00000381166.3|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein
hg19_v2_chrX_+_95939711_95939786	0.0104437	UGACCUA	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr3_+_11314099_11314122	0.0100296	UGACCUA	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr8_-_93115445_93115462	0.00955497	UGACCUA	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr3_-_32022733_32022809	0.00934936	UGACCUA	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr1_+_28995231_28995250	0.00898488	UGACCUA	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr11_+_119076745_119076792	0.00800643	UGACCUA	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr22_-_22221900_22221970	0.00750908	UGACCUA	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr2_-_25475120_25475180	0.00730616	UGACCUA	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr20_+_42086525_42086568	0.00669125	UGACCUA	ENST00000244020.3|SRSF6|ENSG00000124193.10|serine/arginine-rich splicing factor 6
hg19_v2_chr8_+_110346546_110346619	0.00567283	UGACCUA	ENST00000521662.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000521688.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000520147.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila)
hg19_v2_chr10_+_70661014_70661090	0.00539896	UGACCUA	ENST00000373585.3|DDX50|ENSG00000107625.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
hg19_v2_chr10_-_99052382_99052413	0.00489865	UGACCUA	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr21_-_36260980_36261011	0.00475423	UGACCUA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr1_+_179851410_179851447	0.00448344	UGACCUA	ENST00000271583.3|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1 	ENST00000606911.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr3_-_42846021_42846032	0.00444982	UGACCUA	ENST00000321331.7|HIGD1A|ENSG00000181061.9|HIG1 hypoxia inducible domain family, member 1A
hg19_v2_chr21_-_39288743_39288765	0.00443649	UGACCUA	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr16_+_67596310_67596353	0.0040963	UGACCUA	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr19_+_30863271_30863338	0.00377051	UGACCUA	ENST00000355537.3|ZNF536|ENSG00000198597.4|zinc finger protein 536
hg19_v2_chr9_-_127533519_127533576	0.00343469	UGACCUA	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr7_+_97736197_97736211	0.00329395	UGACCUA	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chr1_-_100715372_100715400	0.00300869	UGACCUA	ENST00000370131.3|DBT|ENSG00000137992.10|dihydrolipoamide branched chain transacylase E2 	ENST00000370132.4|DBT|ENSG00000137992.10|dihydrolipoamide branched chain transacylase E2
hg19_v2_chr2_+_109204909_109204928	0.0028531	UGACCUA	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr7_+_77469439_77469497	0.00268433	UGACCUA	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr1_+_179262905_179262986	0.00246585	UGACCUA	ENST00000539888.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000540564.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000535686.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000367619.3|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1
hg19_v2_chr20_-_41818373_41818527	0.00244541	UGACCUA	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr5_-_140998616_140998639	0.00195576	UGACCUA	ENST00000389054.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398562.2|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000389057.5|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398566.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398557.4|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000253811.6|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1
hg19_v2_chr18_+_49866496_49866548	0.00116646	UGACCUA	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr18_-_33709268_33709380	0.000721127	UGACCUA	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
