hg19_v2_chr6_+_116601265_116601288	3.96534	UGCAUAG	ENST00000452085.3|DSE|ENSG00000111817.12|dermatan sulfate epimerase
hg19_v2_chr7_+_69064300_69064342	3.1468	UGCAUAG	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr5_-_157002775_157002790	2.87311	UGCAUAG	ENST00000257527.4|ADAM19|ENSG00000135074.11|ADAM metallopeptidase domain 19
hg19_v2_chr13_-_107187462_107187462	2.60517	UGCAUAG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr13_-_110438914_110438937	2.50933	UGCAUAG	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr4_+_174089904_174089921	2.34626	UGCAUAG	ENST00000265000.4|GALNT7|ENSG00000109586.7|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)
hg19_v2_chr15_-_52821247_52821295	2.108	UGCAUAG	ENST00000399231.3|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin) 	ENST00000399233.2|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin)
hg19_v2_chr6_-_84140757_84140803	2.05867	UGCAUAG	ENST00000541327.1|ME1|ENSG00000065833.7|malic enzyme 1, NADP(+)-dependent, cytosolic 	ENST00000369705.3|ME1|ENSG00000065833.7|malic enzyme 1, NADP(+)-dependent, cytosolic 	ENST00000543031.1|ME1|ENSG00000065833.7|malic enzyme 1, NADP(+)-dependent, cytosolic
hg19_v2_chr13_+_73632897_73632930	1.92191	UGCAUAG	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr12_-_85306594_85306655	1.76762	UGCAUAG	ENST00000266682.5|SLC6A15|ENSG00000072041.12|solute carrier family 6 (neutral amino acid transporter), member 15
hg19_v2_chr12_+_4382917_4382938	1.71628	UGCAUAG	ENST00000261254.3|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr14_+_85996471_85996497	1.69952	UGCAUAG	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr4_+_26585538_26585680	1.66032	UGCAUAG	ENST00000264866.4|TBC1D19|ENSG00000109680.6|TBC1 domain family, member 19
hg19_v2_chr5_+_86564739_86564791	1.63783	UGCAUAG	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chrX_+_12993202_12993239	1.60377	UGCAUAG	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr5_+_140772381_140772381	1.53219	UGCAUAG	ENST00000398604.2|PCDHGA8|ENSG00000253767.1|protocadherin gamma subfamily A, 8
hg19_v2_chr12_-_106641728_106641805	1.51684	UGCAUAG	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr1_+_160175117_160175136	1.50643	UGCAUAG	ENST00000360472.4|PEA15|ENSG00000162734.8|phosphoprotein enriched in astrocytes 15
hg19_v2_chr10_+_74033672_74033688	1.47097	UGCAUAG	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr4_-_102268628_102268693	1.41275	UGCAUAG	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr5_+_140864649_140864741	1.41095	UGCAUAG	ENST00000306593.1|PCDHGC4|ENSG00000242419.1|protocadherin gamma subfamily C, 4
hg19_v2_chr2_-_1748214_1748295	1.37649	UGCAUAG	ENST00000433670.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000425171.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000252804.4|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila)
hg19_v2_chr5_+_140797296_140797427	1.36666	UGCAUAG	ENST00000398594.2|PCDHGB7|ENSG00000254122.1|protocadherin gamma subfamily B, 7
hg19_v2_chr1_-_95392635_95392834	1.33285	UGCAUAG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr2_-_208030647_208030689	1.30054	UGCAUAG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr8_-_116681221_116681236	1.29044	UGCAUAG	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr7_-_41742697_41742714	1.24762	UGCAUAG	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr5_+_140868717_140868808	1.23902	UGCAUAG	ENST00000252087.1|PCDHGC5|ENSG00000240764.2|protocadherin gamma subfamily C, 5
hg19_v2_chr5_+_140743859_140743898	1.17722	UGCAUAG	ENST00000518069.1|PCDHGA5|ENSG00000253485.1|protocadherin gamma subfamily A, 5
hg19_v2_chr5_+_140753444_140753651	1.16947	UGCAUAG	ENST00000517434.1|PCDHGA6|ENSG00000253731.1|protocadherin gamma subfamily A, 6
hg19_v2_chr18_-_61034743_61034768	1.14633	UGCAUAG	ENST00000406396.3|KDSR|ENSG00000119537.11|3-ketodihydrosphingosine reductase
hg19_v2_chr5_+_140762268_140762467	1.12796	UGCAUAG	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr5_+_140749803_140749831	1.12532	UGCAUAG	ENST00000576222.1|PCDHGB3|ENSG00000262209.1|protocadherin gamma subfamily B, 3
hg19_v2_chr5_+_140718396_140718539	1.10911	UGCAUAG	ENST00000394576.2|PCDHGA2|ENSG00000081853.13|protocadherin gamma subfamily A, 2
hg19_v2_chr5_+_140739537_140739703	1.10323	UGCAUAG	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chr5_+_140729649_140729828	1.09122	UGCAUAG	ENST00000523390.1|PCDHGB1|ENSG00000254221.1|protocadherin gamma subfamily B, 1
hg19_v2_chr2_-_166651191_166651213	1.09081	UGCAUAG	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr15_-_73925651_73925773	1.06864	UGCAUAG	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr9_-_14314066_14314075	1.05364	UGCAUAG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr16_-_17564738_17564834	1.04298	UGCAUAG	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr1_-_244013384_244013430	1.03626	UGCAUAG	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr21_-_27542972_27543138	1.03598	UGCAUAG	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr5_+_140810132_140810214	1.02797	UGCAUAG	ENST00000252085.3|PCDHGA12|ENSG00000253159.1|protocadherin gamma subfamily A, 12
hg19_v2_chr12_+_79258547_79258607	1.01777	UGCAUAG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr1_+_182992545_182992630	1.00253	UGCAUAG	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr5_+_140767452_140767452	1.0005	UGCAUAG	ENST00000519479.1|PCDHGB4|ENSG00000253953.1|protocadherin gamma subfamily B, 4
hg19_v2_chr5_+_140734570_140734768	0.960967	UGCAUAG	ENST00000571252.1|PCDHGA4|ENSG00000262576.1|protocadherin gamma subfamily A, 4
hg19_v2_chr2_+_5832799_5832799	0.95316	UGCAUAG	ENST00000322002.3|SOX11|ENSG00000176887.5|SRY (sex determining region Y)-box 11
hg19_v2_chr1_+_213123915_213123955	0.938363	UGCAUAG	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr8_+_98881268_98881382	0.932885	UGCAUAG	ENST00000254898.5|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000524308.1|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000522025.2|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr15_+_31619013_31619095	0.932536	UGCAUAG	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr8_-_25315905_25315983	0.846642	UGCAUAG	ENST00000221200.4|KCTD9|ENSG00000104756.11|potassium channel tetramerization domain containing 9
hg19_v2_chr3_+_111717511_111717589	0.83388	UGCAUAG	ENST00000478951.1|TAGLN3|ENSG00000144834.8|transgelin 3 	ENST00000393917.2|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr4_-_41216619_41216637	0.829792	UGCAUAG	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr19_+_39138271_39138310	0.821543	UGCAUAG	ENST00000252699.2|ACTN4|ENSG00000130402.7|actinin, alpha 4
hg19_v2_chr8_+_24772455_24772535	0.785198	UGCAUAG	ENST00000433454.2|NEFM|ENSG00000104722.9|neurofilament, medium polypeptide
hg19_v2_chr10_+_11206925_11206993	0.778926	UGCAUAG	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr8_+_28351707_28351781	0.761228	UGCAUAG	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr1_+_78470530_78470551	0.760278	UGCAUAG	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr3_-_123304017_123304040	0.758302	UGCAUAG	ENST00000383657.5|PTPLB|ENSG00000206527.5|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b
hg19_v2_chr12_+_72666407_72666463	0.729053	UGCAUAG	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr16_+_69221028_69221092	0.721691	UGCAUAG	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr3_+_30648066_30648167	0.716284	UGCAUAG	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr2_-_222436988_222437031	0.707297	UGCAUAG	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chr5_+_34656331_34656351	0.703572	UGCAUAG	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr13_+_113951532_113951594	0.690682	UGCAUAG	ENST00000332556.4|LAMP1|ENSG00000185896.9|lysosomal-associated membrane protein 1
hg19_v2_chr5_+_67511524_67511628	0.687175	UGCAUAG	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr7_-_6312206_6312308	0.682551	UGCAUAG	ENST00000350796.3|CYTH3|ENSG00000008256.11|cytohesin 3
hg19_v2_chr5_-_114880533_114880591	0.682051	UGCAUAG	ENST00000274457.3|FEM1C|ENSG00000145780.6|fem-1 homolog c (C. elegans)
hg19_v2_chr4_-_170924888_170924950	0.678099	UGCAUAG	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr8_-_105601134_105601252	0.67789	UGCAUAG	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chr9_-_34637718_34637791	0.677525	UGCAUAG	ENST00000378892.1|SIGMAR1|ENSG00000147955.12|sigma non-opioid intracellular receptor 1 	ENST00000277010.4|SIGMAR1|ENSG00000147955.12|sigma non-opioid intracellular receptor 1
hg19_v2_chr2_+_74881355_74881397	0.648415	UGCAUAG	ENST00000357877.2|SEMA4F|ENSG00000135622.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
hg19_v2_chr1_+_203595903_203595934	0.641253	UGCAUAG	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr3_+_179065474_179065530	0.634432	UGCAUAG	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr9_-_23821273_23821313	0.608269	UGCAUAG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr5_+_140723601_140723601	0.594672	UGCAUAG	ENST00000253812.6|PCDHGA3|ENSG00000254245.1|protocadherin gamma subfamily A, 3
hg19_v2_chr8_-_57906362_57906452	0.578993	UGCAUAG	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr18_-_53255766_53255860	0.577211	UGCAUAG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr5_+_140227048_140227048	0.575795	UGCAUAG	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr5_-_179780312_179780387	0.574985	UGCAUAG	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr5_-_148930960_148931013	0.572761	UGCAUAG	ENST00000261798.5|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1 	ENST00000377843.2|CSNK1A1|ENSG00000113712.12|casein kinase 1, alpha 1
hg19_v2_chr3_-_133969437_133969670	0.571091	UGCAUAG	ENST00000460933.1|RYK|ENSG00000163785.8|receptor-like tyrosine kinase 	ENST00000296084.4|RYK|ENSG00000163785.8|receptor-like tyrosine kinase
hg19_v2_chr12_-_54673871_54673925	0.567473	UGCAUAG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr2_-_175499294_175499339	0.543989	UGCAUAG	ENST00000392547.2|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr3_+_128444965_128444985	0.541665	UGCAUAG	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr17_-_4269768_4269835	0.538143	UGCAUAG	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr7_-_558876_559046	0.535739	UGCAUAG	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr1_-_154943212_154943230	0.531698	UGCAUAG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr3_+_130569429_130569479	0.530344	UGCAUAG	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr2_+_148602058_148602185	0.529641	UGCAUAG	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr7_+_7606497_7606595	0.525663	UGCAUAG	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr20_+_9494987_9495027	0.512377	UGCAUAG	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr5_-_39425068_39425098	0.493549	UGCAUAG	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr8_-_119124045_119124097	0.49215	UGCAUAG	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr4_-_90758227_90758379	0.491321	UGCAUAG	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr2_+_85766280_85766299	0.488664	UGCAUAG	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr3_+_88188254_88188254	0.465941	UGCAUAG	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr1_+_15736359_15736463	0.46516	UGCAUAG	ENST00000375980.4|EFHD2|ENSG00000142634.8|EF-hand domain family, member D2
hg19_v2_chr4_+_184426147_184426237	0.459942	UGCAUAG	ENST00000302327.3|ING2|ENSG00000168556.5|inhibitor of growth family, member 2
hg19_v2_chr1_+_64239657_64239724	0.440885	UGCAUAG	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr10_-_119806085_119806114	0.43799	UGCAUAG	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr20_-_32308028_32308125	0.422405	UGCAUAG	ENST00000409299.3|PXMP4|ENSG00000101417.7|peroxisomal membrane protein 4, 24kDa 	ENST00000217398.3|PXMP4|ENSG00000101417.7|peroxisomal membrane protein 4, 24kDa 	ENST00000344022.3|PXMP4|ENSG00000101417.7|peroxisomal membrane protein 4, 24kDa
hg19_v2_chrX_+_40944871_40944888	0.422085	UGCAUAG	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr2_+_235860616_235860645	0.420361	UGCAUAG	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chr7_+_115850547_115850626	0.399541	UGCAUAG	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr1_+_43148059_43148111	0.39228	UGCAUAG	ENST00000321358.7|YBX1|ENSG00000065978.13|Y box binding protein 1 	ENST00000332220.6|YBX1|ENSG00000065978.13|Y box binding protein 1
hg19_v2_chr8_-_74884511_74884546	0.381119	UGCAUAG	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr5_+_140855495_140855580	0.379193	UGCAUAG	ENST00000308177.3|PCDHGC3|ENSG00000240184.2|protocadherin gamma subfamily C, 3
hg19_v2_chr4_+_77870856_77870919	0.378715	UGCAUAG	ENST00000264893.6|SEPT11|ENSG00000138758.7|septin 11 	ENST00000502584.1|SEPT11|ENSG00000138758.7|septin 11 	ENST00000510641.1|SEPT11|ENSG00000138758.7|septin 11
hg19_v2_chr4_-_5894777_5894799	0.374488	UGCAUAG	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr12_+_60083118_60083157	0.359421	UGCAUAG	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr10_+_64564469_64564535	0.341583	UGCAUAG	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr1_+_218519577_218519594	0.338498	UGCAUAG	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr5_-_132299313_132299334	0.338185	UGCAUAG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr19_+_3359561_3359681	0.337011	UGCAUAG	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr11_+_13299186_13299432	0.332087	UGCAUAG	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr10_+_180987_181009	0.328237	UGCAUAG	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr7_-_124405681_124405709	0.326103	UGCAUAG	ENST00000303921.2|GPR37|ENSG00000170775.2|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v2_chr5_+_140248518_140248689	0.325057	UGCAUAG	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr8_+_94929168_94929235	0.323416	UGCAUAG	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr3_-_18466787_18466861	0.323114	UGCAUAG	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr5_+_140306478_140306478	0.322609	UGCAUAG	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr18_-_18691739_18691812	0.322324	UGCAUAG	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr12_-_46662772_46662835	0.321704	UGCAUAG	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr18_-_60987220_60987386	0.318874	UGCAUAG	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr5_+_140782351_140782520	0.315761	UGCAUAG	ENST00000573521.1|PCDHGA9|ENSG00000261934.1|protocadherin gamma subfamily A, 9
hg19_v2_chr17_+_48423453_48423505	0.315234	UGCAUAG	ENST00000017003.2|XYLT2|ENSG00000015532.5|xylosyltransferase II 	ENST00000509778.1|XYLT2|ENSG00000015532.5|xylosyltransferase II 	ENST00000507602.1|XYLT2|ENSG00000015532.5|xylosyltransferase II
hg19_v2_chr19_+_18794470_18794512	0.314085	UGCAUAG	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr3_-_52931557_52931623	0.30586	UGCAUAG	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr12_+_67663056_67663067	0.304362	UGCAUAG	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr3_+_107241783_107241850	0.300899	UGCAUAG	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr5_+_140213815_140213969	0.300277	UGCAUAG	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr14_+_71374122_71374193	0.299578	UGCAUAG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr1_+_40505891_40505995	0.297344	UGCAUAG	ENST00000372797.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372802.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000449311.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast)
hg19_v2_chr7_-_112430647_112430776	0.294041	UGCAUAG	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr14_-_53417732_53417815	0.292125	UGCAUAG	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr14_+_55518349_55518423	0.290606	UGCAUAG	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr12_+_54402790_54402832	0.29044	UGCAUAG	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr20_-_10654639_10654694	0.286824	UGCAUAG	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr3_+_152879985_152880038	0.283322	UGCAUAG	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr5_-_150948414_150948505	0.283231	UGCAUAG	ENST00000261800.5|FAT2|ENSG00000086570.8|FAT atypical cadherin 2
hg19_v2_chr5_+_140220769_140220907	0.281419	UGCAUAG	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr5_+_155753745_155753782	0.280804	UGCAUAG	ENST00000435422.3|SGCD|ENSG00000170624.9|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 	ENST00000337851.4|SGCD|ENSG00000170624.9|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 	ENST00000447401.1|SGCD|ENSG00000170624.9|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
hg19_v2_chr14_-_91526922_91527001	0.271542	UGCAUAG	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr13_-_36705425_36705445	0.266545	UGCAUAG	ENST00000255448.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000360631.3|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000379892.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr5_+_140792614_140792743	0.259678	UGCAUAG	ENST00000398610.2|PCDHGA10|ENSG00000253846.1|protocadherin gamma subfamily A, 10
hg19_v2_chr2_-_202316260_202316308	0.255725	UGCAUAG	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr1_+_110091189_110091268	0.251815	UGCAUAG	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr3_-_160283348_160283376	0.251573	UGCAUAG	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr1_-_150552006_150552093	0.244666	UGCAUAG	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr5_+_96271141_96271168	0.240782	UGCAUAG	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr3_-_113465065_113465147	0.239663	UGCAUAG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr12_+_111843749_111843763	0.239018	UGCAUAG	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr21_-_19191703_19191718	0.237658	UGCAUAG	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr20_+_10199468_10199516	0.237137	UGCAUAG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr11_+_125034586_125034604	0.234303	UGCAUAG	ENST00000298282.9|PKNOX2|ENSG00000165495.11|PBX/knotted 1 homeobox 2
hg19_v2_chr2_-_182545603_182545603	0.231928	UGCAUAG	ENST00000295108.3|NEUROD1|ENSG00000162992.3|neuronal differentiation 1
hg19_v2_chr5_+_140345820_140345820	0.231824	UGCAUAG	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr10_+_86088381_86088436	0.227539	UGCAUAG	ENST00000224756.8|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2 	ENST00000372088.2|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr8_+_37654424_37654436	0.227394	UGCAUAG	ENST00000315215.7|GPR124|ENSG00000020181.13|G protein-coupled receptor 124
hg19_v2_chr5_+_140710061_140710252	0.226776	UGCAUAG	ENST00000517417.1|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1 	ENST00000378105.3|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1
hg19_v2_chr5_+_112043186_112043225	0.22517	UGCAUAG	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr14_+_51706886_51707006	0.220439	UGCAUAG	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr6_-_106773491_106773559	0.21849	UGCAUAG	ENST00000360666.4|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chrX_+_44732757_44732860	0.216943	UGCAUAG	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr5_+_140165876_140165876	0.216833	UGCAUAG	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr21_-_43346790_43346823	0.200063	UGCAUAG	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chrX_+_135067576_135067634	0.199489	UGCAUAG	ENST00000370701.1|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370698.3|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 	ENST00000370695.4|SLC9A6|ENSG00000198689.5|solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6
hg19_v2_chr17_+_59477233_59477263	0.197744	UGCAUAG	ENST00000240328.3|TBX2|ENSG00000121068.9|T-box 2
hg19_v2_chr6_-_139695757_139695795	0.1968	UGCAUAG	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr9_-_95055956_95056004	0.19242	UGCAUAG	ENST00000375629.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000447699.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000375643.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000395554.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr1_+_202317815_202317854	0.190227	UGCAUAG	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr18_-_30050395_30050495	0.189137	UGCAUAG	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr17_-_43568062_43568110	0.189037	UGCAUAG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr20_-_48099182_48099214	0.186569	UGCAUAG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr15_+_101142722_101142816	0.18386	UGCAUAG	ENST00000332783.7|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000558747.1|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000343276.4|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7
hg19_v2_chr4_+_72204755_72204778	0.183808	UGCAUAG	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr5_+_140254884_140255058	0.178707	UGCAUAG	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr1_-_222885770_222885866	0.177778	UGCAUAG	ENST00000355727.2|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated 	ENST00000340020.6|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated
hg19_v2_chr1_+_100435315_100435345	0.170807	UGCAUAG	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr12_+_113659234_113659300	0.170442	UGCAUAG	ENST00000551096.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000551099.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000335509.6|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000552897.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000550785.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000549279.1|TPCN1|ENSG00000186815.8|two pore segment channel 1
hg19_v2_chr19_-_2050852_2050895	0.165346	UGCAUAG	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr11_+_114270752_114270856	0.163602	UGCAUAG	ENST00000540163.1|RBM7|ENSG00000076053.6|RNA binding motif protein 7
hg19_v2_chr12_+_104458235_104458344	0.162636	UGCAUAG	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr22_+_29469012_29469066	0.16053	UGCAUAG	ENST00000400335.4|KREMEN1|ENSG00000183762.8|kringle containing transmembrane protein 1 	ENST00000400338.2|KREMEN1|ENSG00000183762.8|kringle containing transmembrane protein 1
hg19_v2_chr8_+_79578282_79578334	0.156625	UGCAUAG	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chr14_+_57735614_57735629	0.154846	UGCAUAG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chrX_-_48824793_48824793	0.154838	UGCAUAG	ENST00000376477.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr13_-_53422640_53422780	0.153516	UGCAUAG	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr1_-_109584608_109584712	0.149791	UGCAUAG	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr10_+_75757863_75757897	0.148186	UGCAUAG	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr2_+_45168875_45168916	0.147931	UGCAUAG	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chrX_+_12156582_12156603	0.146003	UGCAUAG	ENST00000380682.1|FRMPD4|ENSG00000169933.8|FERM and PDZ domain containing 4
hg19_v2_chr12_+_111471828_111471975	0.14552	UGCAUAG	ENST00000261726.6|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr17_-_4046257_4046349	0.143351	UGCAUAG	ENST00000381638.2|ZZEF1|ENSG00000074755.10|zinc finger, ZZ-type with EF-hand domain 1
hg19_v2_chr13_-_79979919_79979945	0.142932	UGCAUAG	ENST00000267229.7|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr4_-_69215699_69215815	0.137945	UGCAUAG	ENST00000510746.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000344157.4|YTHDC1|ENSG00000083896.8|YTH domain containing 1 	ENST00000355665.3|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr2_-_37193606_37193633	0.137915	UGCAUAG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr3_-_178790057_178790072	0.136727	UGCAUAG	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr12_+_4918342_4918475	0.136485	UGCAUAG	ENST00000280684.3|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6 	ENST00000433855.1|KCNA6|ENSG00000151079.6|potassium voltage-gated channel, shaker-related subfamily, member 6
hg19_v2_chr1_-_214724566_214724566	0.134073	UGCAUAG	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr9_+_125703282_125703337	0.132302	UGCAUAG	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr4_+_89513574_89513670	0.132233	UGCAUAG	ENST00000402738.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000431413.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000422770.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000407637.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3
hg19_v2_chr5_+_119799927_119800064	0.130201	UGCAUAG	ENST00000407149.2|PRR16|ENSG00000184838.10|proline rich 16 	ENST00000379551.2|PRR16|ENSG00000184838.10|proline rich 16
hg19_v2_chr4_+_99916765_99916776	0.129609	UGCAUAG	ENST00000296411.6|METAP1|ENSG00000164024.7|methionyl aminopeptidase 1
hg19_v2_chr18_-_44497308_44497499	0.127262	UGCAUAG	ENST00000585916.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000324794.7|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000545673.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2
hg19_v2_chr16_-_3930724_3930735	0.125498	UGCAUAG	ENST00000262367.5|CREBBP|ENSG00000005339.8|CREB binding protein
hg19_v2_chr1_+_50574585_50574638	0.124096	UGCAUAG	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr6_+_41040678_41040722	0.123237	UGCAUAG	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr18_-_23670546_23670605	0.123201	UGCAUAG	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr4_-_76439596_76439643	0.116409	UGCAUAG	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr11_+_33278811_33279133	0.113238	UGCAUAG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr12_+_110719032_110719113	0.105375	UGCAUAG	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr1_+_179851410_179851447	0.104542	UGCAUAG	ENST00000271583.3|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1 	ENST00000606911.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr17_-_56084578_56084707	0.104165	UGCAUAG	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr10_+_52751010_52751118	0.101466	UGCAUAG	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr12_-_67072714_67072925	0.101166	UGCAUAG	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr2_-_166060571_166060582	0.100523	UGCAUAG	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr11_-_130298888_130298888	0.100127	UGCAUAG	ENST00000257359.6|ADAMTS8|ENSG00000134917.9|ADAM metallopeptidase with thrombospondin type 1 motif, 8
hg19_v2_chrX_-_41782249_41782287	0.098753	UGCAUAG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chrX_-_54384425_54384495	0.097779	UGCAUAG	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr7_+_5085452_5085553	0.0968996	UGCAUAG	ENST00000353796.3|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger 	ENST00000396904.2|RBAK-RBAKDN|ENSG00000272968.1|RBAK-RBAKDN readthrough 	ENST00000396912.1|RBAK|ENSG00000146587.13|RB-associated KRAB zinc finger
hg19_v2_chr3_-_125094093_125094198	0.096566	UGCAUAG	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr22_-_39096661_39096681	0.0960802	UGCAUAG	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr3_+_52444651_52444697	0.0954108	UGCAUAG	ENST00000327906.3|PHF7|ENSG00000010318.15|PHD finger protein 7
hg19_v2_chr5_-_95297678_95297775	0.0953104	UGCAUAG	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr1_-_149982624_149982719	0.0949676	UGCAUAG	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr5_+_140180635_140180783	0.0884313	UGCAUAG	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr1_-_38325256_38325292	0.0878278	UGCAUAG	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr14_+_70078303_70078321	0.085689	UGCAUAG	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr7_-_98741642_98741713	0.0854434	UGCAUAG	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr1_-_39339777_39339777	0.0840223	UGCAUAG	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr5_+_140186647_140186773	0.0839818	UGCAUAG	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr6_+_44238203_44238222	0.0791334	UGCAUAG	ENST00000451188.2|TMEM151B|ENSG00000178233.13|transmembrane protein 151B
hg19_v2_chr15_-_51914996_51915035	0.0777395	UGCAUAG	ENST00000251076.5|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr2_-_214014959_214015058	0.076763	UGCAUAG	ENST00000442445.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000457361.1|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000342002.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr4_+_39699664_39699772	0.0743623	UGCAUAG	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr10_-_125851961_125851970	0.0732323	UGCAUAG	ENST00000346248.5|CHST15|ENSG00000182022.13|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
hg19_v2_chr10_-_114206649_114206688	0.0731704	UGCAUAG	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr1_-_37499726_37499850	0.0715121	UGCAUAG	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr12_+_109915179_109915220	0.0709543	UGCAUAG	ENST00000434735.2|UBE3B|ENSG00000151148.9|ubiquitin protein ligase E3B
hg19_v2_chr1_+_159141397_159141549	0.0696923	UGCAUAG	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr12_+_93965451_93965494	0.0680264	UGCAUAG	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr1_+_41249539_41249766	0.0656547	UGCAUAG	ENST00000347132.5|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4 	ENST00000509682.2|KCNQ4|ENSG00000117013.10|potassium voltage-gated channel, KQT-like subfamily, member 4
hg19_v2_chr12_+_54366894_54366922	0.0619312	UGCAUAG	ENST00000546378.1|HOXC11|ENSG00000123388.4|homeobox C11 	ENST00000243082.4|HOXC11|ENSG00000123388.4|homeobox C11
hg19_v2_chr22_-_28315115_28315260	0.0570243	UGCAUAG	ENST00000455418.3|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000436663.1|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000320996.10|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta 	ENST00000335272.5|PITPNB|ENSG00000180957.13|phosphatidylinositol transfer protein, beta
hg19_v2_chr16_-_31021921_31022044	0.0570235	UGCAUAG	ENST00000215095.5|STX1B|ENSG00000099365.5|syntaxin 1B
hg19_v2_chr9_+_129567282_129567353	0.0546482	UGCAUAG	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr5_+_14143728_14143829	0.0543935	UGCAUAG	ENST00000344204.4|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor 	ENST00000537187.1|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor
hg19_v2_chr6_-_91006461_91006517	0.0542392	UGCAUAG	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr6_+_45389893_45389914	0.0530653	UGCAUAG	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr8_-_70747205_70747299	0.0527724	UGCAUAG	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chrX_+_16804544_16804613	0.0523212	UGCAUAG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr18_-_57027194_57027194	0.0495024	UGCAUAG	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr6_-_24721054_24721074	0.0487927	UGCAUAG	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr13_+_25875662_25875782	0.048736	UGCAUAG	ENST00000381736.3|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000463407.1|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000381718.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr5_-_32313019_32313081	0.0469318	UGCAUAG	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr8_-_93115445_93115462	0.0467114	UGCAUAG	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr7_-_138666053_138666146	0.046037	UGCAUAG	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr6_+_117002339_117002400	0.0431867	UGCAUAG	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr14_-_27066636_27066701	0.0415036	UGCAUAG	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr6_+_101846664_101846702	0.0408062	UGCAUAG	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr20_+_1246908_1246999	0.037823	UGCAUAG	ENST00000381873.3|SNPH|ENSG00000101298.9|syntaphilin 	ENST00000381867.1|SNPH|ENSG00000101298.9|syntaphilin
hg19_v2_chr3_-_171178157_171178225	0.0361442	UGCAUAG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr1_+_244816237_244816357	0.0356132	UGCAUAG	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr3_-_114790179_114790222	0.0349512	UGCAUAG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr2_+_207308220_207308267	0.0326152	UGCAUAG	ENST00000264377.3|ADAM23|ENSG00000114948.8|ADAM metallopeptidase domain 23
hg19_v2_chr4_+_140222609_140222742	0.031875	UGCAUAG	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr21_-_38362497_38362541	0.0313947	UGCAUAG	ENST00000427746.1|HLCS|ENSG00000159267.10|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 	ENST00000336648.4|HLCS|ENSG00000159267.10|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
hg19_v2_chr3_-_141868357_141868393	0.0302698	UGCAUAG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr10_-_15210666_15210707	0.0301538	UGCAUAG	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr17_-_31620006_31620006	0.029861	UGCAUAG	ENST00000225823.2|ASIC2|ENSG00000108684.10|acid-sensing (proton-gated) ion channel 2
hg19_v2_chr4_-_89205879_89205921	0.0298272	UGCAUAG	ENST00000608933.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000315194.4|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000514204.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K
hg19_v2_chr19_+_36208877_36208921	0.0288378	UGCAUAG	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chrX_-_20159934_20159976	0.0277168	UGCAUAG	ENST00000379593.1|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked 	ENST00000379607.5|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked
hg19_v2_chr10_+_45455207_45455279	0.0265183	UGCAUAG	ENST00000334940.6|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000374417.2|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000340258.5|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000427758.1|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4
hg19_v2_chr19_-_1174226_1174287	0.0259612	UGCAUAG	ENST00000587024.1|SBNO2|ENSG00000064932.11|strawberry notch homolog 2 (Drosophila) 	ENST00000361757.3|SBNO2|ENSG00000064932.11|strawberry notch homolog 2 (Drosophila)
hg19_v2_chr8_+_98656336_98656535	0.0247742	UGCAUAG	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr2_-_178128528_178128574	0.0216672	UGCAUAG	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr4_-_96470350_96470373	0.0214525	UGCAUAG	ENST00000504962.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans) 	ENST00000453304.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans) 	ENST00000506749.1|UNC5C|ENSG00000182168.10|unc-5 homolog C (C. elegans)
hg19_v2_chr1_-_39347255_39347303	0.0207722	UGCAUAG	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr14_-_93799360_93799438	0.0185549	UGCAUAG	ENST00000334746.5|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000554565.1|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000298896.3|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7
hg19_v2_chr5_+_31193847_31193887	0.0174368	UGCAUAG	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr12_+_62860581_62860629	0.016233	UGCAUAG	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr1_-_154928562_154928629	0.0130552	UGCAUAG	ENST00000368463.3|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000539880.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000542459.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000368460.3|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000368465.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1
hg19_v2_chr5_-_59189545_59189625	0.0125643	UGCAUAG	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr17_+_16593539_16593639	0.0123979	UGCAUAG	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr2_-_69870835_69870853	0.011439	UGCAUAG	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr19_+_49122548_49122777	0.0100261	UGCAUAG	ENST00000245222.4|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000340932.3|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000601712.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000600537.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr1_+_171810606_171810649	0.00962718	UGCAUAG	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr15_-_52861394_52861436	0.00906225	UGCAUAG	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr15_-_30114622_30114706	0.00881098	UGCAUAG	ENST00000495972.2|TJP1|ENSG00000104067.12|tight junction protein 1 	ENST00000346128.6|TJP1|ENSG00000104067.12|tight junction protein 1
hg19_v2_chr10_+_102505468_102505546	0.00619247	UGCAUAG	ENST00000361791.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000355243.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000428433.1|PAX2|ENSG00000075891.17|paired box 2 	ENST00000370296.2|PAX2|ENSG00000075891.17|paired box 2
hg19_v2_chr1_-_236445251_236445319	0.00573517	UGCAUAG	ENST00000354619.5|ERO1LB|ENSG00000086619.9|ERO1-like beta (S. cerevisiae) 	ENST00000327333.8|ERO1LB|ENSG00000086619.9|ERO1-like beta (S. cerevisiae)
hg19_v2_chr5_+_179125907_179126038	0.00476108	UGCAUAG	ENST00000247461.4|CANX|ENSG00000127022.10|calnexin 	ENST00000452673.2|CANX|ENSG00000127022.10|calnexin 	ENST00000502498.1|CANX|ENSG00000127022.10|calnexin 	ENST00000507307.1|CANX|ENSG00000127022.10|calnexin 	ENST00000513246.1|CANX|ENSG00000127022.10|calnexin 	ENST00000502673.1|CANX|ENSG00000127022.10|calnexin 	ENST00000506654.1|CANX|ENSG00000127022.10|calnexin 	ENST00000512607.2|CANX|ENSG00000127022.10|calnexin 	ENST00000510810.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr12_+_107168342_107168393	0.00458913	UGCAUAG	ENST00000392837.4|RIC8B|ENSG00000111785.14|RIC8 guanine nucleotide exchange factor B
hg19_v2_chr5_+_140800638_140800795	0.00380763	UGCAUAG	ENST00000398587.2|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11 	ENST00000518882.1|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11
hg19_v2_chr11_+_121322832_121322912	0.00335189	UGCAUAG	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr5_+_140787600_140787770	0.00205825	UGCAUAG	ENST00000520790.1|PCDHGB6|ENSG00000253305.1|protocadherin gamma subfamily B, 6
