hg19_v2_chr1_-_32801825_32801980	3.67809	ZIC3_ZIC4	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr14_+_31343747_31343778	2.58788	ZIC3_ZIC4	ENST00000216361.4|COCH|ENSG00000100473.11|cochlin 	ENST00000396618.3|COCH|ENSG00000100473.11|cochlin 	ENST00000475087.1|COCH|ENSG00000100473.11|cochlin
hg19_v2_chr5_+_75699149_75699180	2.53514	ZIC3_ZIC4	ENST00000379730.3|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr16_-_88717482_88717560	2.47189	ZIC3_ZIC4	ENST00000261623.3|CYBA|ENSG00000051523.6|cytochrome b-245, alpha polypeptide
hg19_v2_chr5_+_75699040_75699090	2.36037	ZIC3_ZIC4	ENST00000274364.6|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr20_+_34203794_34203818	2.13126	ZIC3_ZIC4	ENST00000374273.3|SPAG4|ENSG00000061656.5|sperm associated antigen 4
hg19_v2_chr4_-_40631859_40631889	1.75844	ZIC3_ZIC4	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr20_+_35201857_35201891	1.31894	ZIC3_ZIC4	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr20_+_35201993_35202050	1.19128	ZIC3_ZIC4	ENST00000373872.4|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr9_-_130742792_130742821	1.07811	ZIC3_ZIC4	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chrX_-_78622805_78622877	1.0673	ZIC3_ZIC4	ENST00000373298.2|ITM2A|ENSG00000078596.6|integral membrane protein 2A
hg19_v2_chr11_-_78128811_78128916	0.917173	ZIC3_ZIC4	ENST00000530915.1|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2 	ENST00000361507.4|GAB2|ENSG00000033327.8|GRB2-associated binding protein 2
hg19_v2_chr1_-_114355083_114355123	0.887645	ZIC3_ZIC4	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr7_+_149571045_149571145	0.877348	ZIC3_ZIC4	ENST00000479613.1|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2 	ENST00000606024.1|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2 	ENST00000464662.1|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2 	ENST00000425642.2|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2
hg19_v2_chr7_-_994302_994333	0.777865	ZIC3_ZIC4	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr5_+_121647877_121647913	0.777063	ZIC3_ZIC4	ENST00000514497.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000261367.7|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr17_-_38721711_38721730	0.774662	ZIC3_ZIC4	ENST00000578085.1|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7 	ENST00000246657.2|CCR7|ENSG00000126353.3|chemokine (C-C motif) receptor 7
hg19_v2_chr11_+_22688150_22688192	0.761156	ZIC3_ZIC4	ENST00000454584.2|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr5_+_121647764_121647876	0.744847	ZIC3_ZIC4	ENST00000261368.8|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379533.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379536.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379538.3|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr16_-_58231782_58231856	0.721777	ZIC3_ZIC4	ENST00000565188.1|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide 	ENST00000262506.3|CSNK2A2|ENSG00000070770.4|casein kinase 2, alpha prime polypeptide
hg19_v2_chr3_-_17783990_17784155	0.710565	ZIC3_ZIC4	ENST00000429383.4|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000446863.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000414349.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000428355.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000425944.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000445294.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000444471.1|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5 	ENST00000415814.2|TBC1D5|ENSG00000131374.10|TBC1 domain family, member 5
hg19_v2_chr12_-_48398104_48398269	0.703136	ZIC3_ZIC4	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr15_+_75074385_75074405	0.693829	ZIC3_ZIC4	ENST00000220003.9|CSK|ENSG00000103653.12|c-src tyrosine kinase
hg19_v2_chr7_+_99775366_99775518	0.68861	ZIC3_ZIC4	ENST00000394018.2|STAG3|ENSG00000066923.13|stromal antigen 3 	ENST00000416412.1|STAG3|ENSG00000066923.13|stromal antigen 3
hg19_v2_chr15_+_75074410_75074506	0.688358	ZIC3_ZIC4	ENST00000439220.2|CSK|ENSG00000103653.12|c-src tyrosine kinase
hg19_v2_chr6_-_29595779_29595829	0.65776	ZIC3_ZIC4	ENST00000355973.3|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000377012.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr7_+_99775520_99775578	0.645653	ZIC3_ZIC4	ENST00000317296.5|STAG3|ENSG00000066923.13|stromal antigen 3 	ENST00000422690.1|STAG3|ENSG00000066923.13|stromal antigen 3 	ENST00000439782.1|STAG3|ENSG00000066923.13|stromal antigen 3
hg19_v2_chr10_+_21823079_21823102	0.609672	ZIC3_ZIC4	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr10_+_35416223_35416405	0.604447	ZIC3_ZIC4	ENST00000489321.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000427847.2|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000345491.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000395895.2|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000374728.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000487132.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr5_+_137688285_137688429	0.597797	ZIC3_ZIC4	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr16_+_2039946_2040158	0.595915	ZIC3_ZIC4	ENST00000248121.2|SYNGR3|ENSG00000127561.10|synaptogyrin 3 	ENST00000568896.1|SYNGR3|ENSG00000127561.10|synaptogyrin 3
hg19_v2_chr22_+_23134974_23134990	0.593576	ZIC3_ZIC4	ENST00000390314.2|IGLV2-11|ENSG00000211668.2|immunoglobulin lambda variable 2-11
hg19_v2_chr4_+_154387480_154387536	0.580155	ZIC3_ZIC4	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr13_+_35516390_35516496	0.57734	ZIC3_ZIC4	ENST00000540320.1|NBEA|ENSG00000172915.14|neurobeachin 	ENST00000400445.3|NBEA|ENSG00000172915.14|neurobeachin 	ENST00000310336.4|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr11_+_33563821_33563877	0.56519	ZIC3_ZIC4	ENST00000321505.4|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000265654.5|KIAA1549L|ENSG00000110427.10|KIAA1549-like 	ENST00000389726.3|KIAA1549L|ENSG00000110427.10|KIAA1549-like
hg19_v2_chr19_-_48753104_48753123	0.553012	ZIC3_ZIC4	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr1_-_25256368_25256476	0.546379	ZIC3_ZIC4	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr5_+_121647924_121647940	0.543971	ZIC3_ZIC4	ENST00000414317.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr11_-_73694346_73694357	0.541848	ZIC3_ZIC4	ENST00000310473.3|UCP2|ENSG00000175567.4|uncoupling protein 2 (mitochondrial, proton carrier)
hg19_v2_chr17_-_40428359_40428462	0.538406	ZIC3_ZIC4	ENST00000293328.3|STAT5B|ENSG00000173757.5|signal transducer and activator of transcription 5B
hg19_v2_chr14_-_21994525_21994634	0.532288	ZIC3_ZIC4	ENST00000538754.1|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr19_-_48752812_48752925	0.529202	ZIC3_ZIC4	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr7_-_105925558_105925638	0.526352	ZIC3_ZIC4	ENST00000222553.3|NAMPT|ENSG00000105835.7|nicotinamide phosphoribosyltransferase
hg19_v2_chr11_-_407103_407195	0.52335	ZIC3_ZIC4	ENST00000526395.1|SIGIRR|ENSG00000185187.8|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
hg19_v2_chr22_-_20368028_20368028	0.500269	ZIC3_ZIC4	ENST00000404912.1|GGTLC3|ENSG00000183038.9|gamma-glutamyltransferase light chain 3
hg19_v2_chr2_+_8822113_8822196	0.496067	ZIC3_ZIC4	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr1_-_212873267_212873332	0.482131	ZIC3_ZIC4	ENST00000243440.1|BATF3|ENSG00000123685.4|basic leucine zipper transcription factor, ATF-like 3
hg19_v2_chr7_+_150758304_150758344	0.463063	ZIC3_ZIC4	ENST00000482950.1|SLC4A2|ENSG00000164889.8|solute carrier family 4 (anion exchanger), member 2 	ENST00000463414.1|SLC4A2|ENSG00000164889.8|solute carrier family 4 (anion exchanger), member 2 	ENST00000310317.5|SLC4A2|ENSG00000164889.8|solute carrier family 4 (anion exchanger), member 2
hg19_v2_chr15_-_70388599_70388776	0.462654	ZIC3_ZIC4	ENST00000560996.1|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) 	ENST00000558201.1|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v2_chr22_-_47134077_47134216	0.460008	ZIC3_ZIC4	ENST00000541677.1|CERK|ENSG00000100422.9|ceramide kinase 	ENST00000216264.8|CERK|ENSG00000100422.9|ceramide kinase
hg19_v2_chr9_-_98279241_98279339	0.45557	ZIC3_ZIC4	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr10_+_21823243_21823290	0.433289	ZIC3_ZIC4	ENST00000307729.7|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377091.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr5_+_169064245_169064303	0.428869	ZIC3_ZIC4	ENST00000256935.8|DOCK2|ENSG00000134516.11|dedicator of cytokinesis 2
hg19_v2_chr3_-_129035120_129035136	0.427284	ZIC3_ZIC4	ENST00000333762.4|H1FX|ENSG00000184897.4|H1 histone family, member X
hg19_v2_chr2_+_128180842_128180878	0.420041	ZIC3_ZIC4	ENST00000402125.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr5_-_151304337_151304405	0.41988	ZIC3_ZIC4	ENST00000455880.2|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1 	ENST00000545569.1|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1 	ENST00000274576.4|GLRA1|ENSG00000145888.6|glycine receptor, alpha 1
hg19_v2_chr20_-_62680984_62680999	0.417266	ZIC3_ZIC4	ENST00000340356.7|SOX18|ENSG00000203883.5|SRY (sex determining region Y)-box 18
hg19_v2_chr9_+_4490394_4490446	0.414391	ZIC3_ZIC4	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr1_-_55680762_55680786	0.405534	ZIC3_ZIC4	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr1_+_52195542_52195706	0.405291	ZIC3_ZIC4	ENST00000462759.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000486942.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr16_+_67596310_67596353	0.397929	ZIC3_ZIC4	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr17_-_4890649_4890665	0.395018	ZIC3_ZIC4	ENST00000361571.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chrX_-_151903184_151903211	0.393816	ZIC3_ZIC4	ENST00000357916.4|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12 	ENST00000393869.3|MAGEA12|ENSG00000213401.4|melanoma antigen family A, 12
hg19_v2_chr17_-_5026397_5026422	0.38176	ZIC3_ZIC4	ENST00000250076.3|ZNF232|ENSG00000167840.9|zinc finger protein 232
hg19_v2_chr12_-_51785182_51785220	0.381027	ZIC3_ZIC4	ENST00000356317.3|GALNT6|ENSG00000139629.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) 	ENST00000603188.1|GALNT6|ENSG00000139629.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) 	ENST00000604847.1|GALNT6|ENSG00000139629.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) 	ENST00000604506.1|GALNT6|ENSG00000139629.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)
hg19_v2_chr1_-_38273840_38273888	0.38063	ZIC3_ZIC4	ENST00000373044.2|YRDC|ENSG00000196449.3|yrdC N(6)-threonylcarbamoyltransferase domain containing
hg19_v2_chr5_-_111091948_111091994	0.380558	ZIC3_ZIC4	ENST00000447165.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr17_+_38599693_38599713	0.37756	ZIC3_ZIC4	ENST00000542955.1|IGFBP4|ENSG00000141753.5|insulin-like growth factor binding protein 4 	ENST00000269593.4|IGFBP4|ENSG00000141753.5|insulin-like growth factor binding protein 4
hg19_v2_chr1_+_52195480_52195540	0.377302	ZIC3_ZIC4	ENST00000531828.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000361556.5|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000481937.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr8_-_27462822_27462856	0.367885	ZIC3_ZIC4	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr9_-_124989804_124989865	0.366932	ZIC3_ZIC4	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr17_-_76124812_76124863	0.366184	ZIC3_ZIC4	ENST00000592063.1|TMC6|ENSG00000141524.11|transmembrane channel-like 6 	ENST00000589271.1|TMC6|ENSG00000141524.11|transmembrane channel-like 6 	ENST00000322933.4|TMC6|ENSG00000141524.11|transmembrane channel-like 6 	ENST00000589553.1|TMC6|ENSG00000141524.11|transmembrane channel-like 6
hg19_v2_chr22_+_19467261_19467480	0.365927	ZIC3_ZIC4	ENST00000455750.1|CDC45|ENSG00000093009.5|cell division cycle 45 	ENST00000437685.2|CDC45|ENSG00000093009.5|cell division cycle 45 	ENST00000263201.1|CDC45|ENSG00000093009.5|cell division cycle 45 	ENST00000404724.3|CDC45|ENSG00000093009.5|cell division cycle 45
hg19_v2_chr19_+_45409011_45409069	0.363401	ZIC3_ZIC4	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr15_-_69113218_69113250	0.362546	ZIC3_ZIC4	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr4_-_57301748_57301791	0.359155	ZIC3_ZIC4	ENST00000264220.2|PPAT|ENSG00000128059.4|phosphoribosyl pyrophosphate amidotransferase
hg19_v2_chr16_+_30205754_30205820	0.35113	ZIC3_ZIC4	ENST00000354723.6|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 	ENST00000355544.5|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
hg19_v2_chr16_-_1993260_1993327	0.346917	ZIC3_ZIC4	ENST00000361871.3|MSRB1|ENSG00000198736.7|methionine sulfoxide reductase B1
hg19_v2_chr8_-_70745575_70745625	0.340418	ZIC3_ZIC4	ENST00000524945.1|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr7_-_44924939_44924993	0.335894	ZIC3_ZIC4	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr4_-_140098339_140098392	0.333324	ZIC3_ZIC4	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr2_-_96811170_96811186	0.330219	ZIC3_ZIC4	ENST00000288943.4|DUSP2|ENSG00000158050.4|dual specificity phosphatase 2
hg19_v2_chr17_-_39191107_39191127	0.329569	ZIC3_ZIC4	ENST00000344363.5|KRTAP1-3|ENSG00000221880.2|keratin associated protein 1-3
hg19_v2_chr8_+_90770008_90770092	0.320964	ZIC3_ZIC4	ENST00000540020.1|RIPK2|ENSG00000104312.6|receptor-interacting serine-threonine kinase 2
hg19_v2_chr6_+_134274322_134274342	0.320862	ZIC3_ZIC4	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr9_+_134269439_134269506	0.317264	ZIC3_ZIC4	ENST00000405995.1|PRRC2B|ENSG00000130723.13|proline-rich coiled-coil 2B
hg19_v2_chrX_+_23352133_23352229	0.314793	ZIC3_ZIC4	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr6_+_36410762_36410858	0.314176	ZIC3_ZIC4	ENST00000483557.1|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20 	ENST00000498267.1|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20 	ENST00000544295.1|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20 	ENST00000449081.2|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20 	ENST00000536244.1|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20 	ENST00000460983.1|KCTD20|ENSG00000112078.9|potassium channel tetramerization domain containing 20
hg19_v2_chr1_+_3370990_3371159	0.311943	ZIC3_ZIC4	ENST00000378378.4|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16
hg19_v2_chrX_-_131352152_131352204	0.310952	ZIC3_ZIC4	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr2_+_65216462_65216567	0.309135	ZIC3_ZIC4	ENST00000234256.3|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr5_-_37835010_37835010	0.304326	ZIC3_ZIC4	ENST00000510177.1|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor
hg19_v2_chr11_-_60719213_60719257	0.30251	ZIC3_ZIC4	ENST00000227880.3|SLC15A3|ENSG00000110446.5|solute carrier family 15 (oligopeptide transporter), member 3
hg19_v2_chr3_-_50540854_50540887	0.301939	ZIC3_ZIC4	ENST00000423994.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000424201.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000479441.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000429770.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg19_v2_chr3_+_184097836_184097861	0.298011	ZIC3_ZIC4	ENST00000204604.1|CHRD|ENSG00000090539.11|chordin 	ENST00000310236.3|CHRD|ENSG00000090539.11|chordin
hg19_v2_chrX_+_41192595_41192651	0.297599	ZIC3_ZIC4	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr17_-_78194147_78194199	0.294944	ZIC3_ZIC4	ENST00000534910.1|SGSH|ENSG00000181523.8|N-sulfoglucosamine sulfohydrolase 	ENST00000326317.6|SGSH|ENSG00000181523.8|N-sulfoglucosamine sulfohydrolase
hg19_v2_chr11_-_64510409_64510445	0.293021	ZIC3_ZIC4	ENST00000394429.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated) 	ENST00000394428.1|RASGRP2|ENSG00000068831.14|RAS guanyl releasing protein 2 (calcium and DAG-regulated)
hg19_v2_chr22_+_19466980_19467005	0.289327	ZIC3_ZIC4	ENST00000407835.1|CDC45|ENSG00000093009.5|cell division cycle 45 	ENST00000438587.1|CDC45|ENSG00000093009.5|cell division cycle 45
hg19_v2_chr14_+_103243813_103243955	0.28832	ZIC3_ZIC4	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr19_+_5823813_5823813	0.287781	ZIC3_ZIC4	ENST00000303212.2|NRTN|ENSG00000171119.2|neurturin
hg19_v2_chr3_-_194991876_194991901	0.287486	ZIC3_ZIC4	ENST00000310380.6|XXYLT1|ENSG00000173950.11|xyloside xylosyltransferase 1
hg19_v2_chr11_+_64781575_64781655	0.284896	ZIC3_ZIC4	ENST00000246747.4|ARL2|ENSG00000213465.3|ADP-ribosylation factor-like 2 	ENST00000529384.1|ARL2|ENSG00000213465.3|ADP-ribosylation factor-like 2
hg19_v2_chr11_+_64781657_64781706	0.284017	ZIC3_ZIC4	ENST00000533729.1|ARL2|ENSG00000213465.3|ADP-ribosylation factor-like 2
hg19_v2_chr22_-_26986045_26986127	0.27811	ZIC3_ZIC4	ENST00000442495.1|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2 	ENST00000440953.1|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2 	ENST00000450022.1|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2 	ENST00000338754.4|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2
hg19_v2_chr3_+_184097905_184097995	0.278073	ZIC3_ZIC4	ENST00000450923.1|CHRD|ENSG00000090539.11|chordin
hg19_v2_chr2_+_10183651_10183713	0.269906	ZIC3_ZIC4	ENST00000305883.1|KLF11|ENSG00000172059.6|Kruppel-like factor 11
hg19_v2_chr17_-_41738931_41739040	0.265817	ZIC3_ZIC4	ENST00000329168.3|MEOX1|ENSG00000005102.8|mesenchyme homeobox 1 	ENST00000549132.1|MEOX1|ENSG00000005102.8|mesenchyme homeobox 1
hg19_v2_chr10_+_88854926_88854985	0.265648	ZIC3_ZIC4	ENST00000298784.1|FAM35A|ENSG00000122376.7|family with sequence similarity 35, member A 	ENST00000298786.4|FAM35A|ENSG00000122376.7|family with sequence similarity 35, member A
hg19_v2_chr5_+_102455968_102456013	0.265173	ZIC3_ZIC4	ENST00000358359.3|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr8_+_90769967_90769997	0.264216	ZIC3_ZIC4	ENST00000220751.4|RIPK2|ENSG00000104312.6|receptor-interacting serine-threonine kinase 2
hg19_v2_chr7_+_128577972_128578047	0.262652	ZIC3_ZIC4	ENST00000357234.5|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000477535.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000479582.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000464557.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000402030.2|IRF5|ENSG00000128604.14|interferon regulatory factor 5
hg19_v2_chr6_+_143857949_143858067	0.256881	ZIC3_ZIC4	ENST00000367584.4|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr12_-_51419924_51420066	0.253817	ZIC3_ZIC4	ENST00000541174.2|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr16_+_29818857_29819023	0.247303	ZIC3_ZIC4	ENST00000567444.1|MAZ|ENSG00000103495.9|MYC-associated zinc finger protein (purine-binding transcription factor)
hg19_v2_chr17_-_4890919_4890985	0.245448	ZIC3_ZIC4	ENST00000572543.1|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000381311.5|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000348066.3|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2 	ENST00000358183.4|CAMTA2|ENSG00000108509.16|calmodulin binding transcription activator 2
hg19_v2_chr22_+_22735135_22735208	0.243599	ZIC3_ZIC4	ENST00000390297.2|IGLV1-44|ENSG00000211651.2|immunoglobulin lambda variable 1-44
hg19_v2_chr21_+_45285050_45285069	0.243387	ZIC3_ZIC4	ENST00000291572.8|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chrX_+_123095155_123095179	0.243077	ZIC3_ZIC4	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr19_-_50063907_50063948	0.242714	ZIC3_ZIC4	ENST00000598296.1|NOSIP|ENSG00000142546.9|nitric oxide synthase interacting protein
hg19_v2_chr4_-_149363662_149363688	0.236236	ZIC3_ZIC4	ENST00000355292.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2 	ENST00000358102.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chrX_+_24711997_24712075	0.234024	ZIC3_ZIC4	ENST00000379068.3|POLA1|ENSG00000101868.6|polymerase (DNA directed), alpha 1, catalytic subunit 	ENST00000379059.3|POLA1|ENSG00000101868.6|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v2_chr6_+_89791507_89791559	0.233035	ZIC3_ZIC4	ENST00000354922.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr9_+_100745615_100745648	0.23286	ZIC3_ZIC4	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chr9_-_88356789_88356944	0.232238	ZIC3_ZIC4	ENST00000357081.3|AGTPBP1|ENSG00000135049.11|ATP/GTP binding protein 1 	ENST00000376081.4|AGTPBP1|ENSG00000135049.11|ATP/GTP binding protein 1 	ENST00000337006.4|AGTPBP1|ENSG00000135049.11|ATP/GTP binding protein 1 	ENST00000376109.3|AGTPBP1|ENSG00000135049.11|ATP/GTP binding protein 1
hg19_v2_chr20_+_3869423_3869486	0.230127	ZIC3_ZIC4	ENST00000497424.1|PANK2|ENSG00000125779.17|pantothenate kinase 2
hg19_v2_chr9_+_100174232_100174318	0.228128	ZIC3_ZIC4	ENST00000355295.4|TDRD7|ENSG00000196116.6|tudor domain containing 7
hg19_v2_chr8_+_67976593_67976645	0.225214	ZIC3_ZIC4	ENST00000262210.5|CSPP1|ENSG00000104218.9|centrosome and spindle pole associated protein 1 	ENST00000412460.1|CSPP1|ENSG00000104218.9|centrosome and spindle pole associated protein 1
hg19_v2_chrX_-_130423386_130423403	0.223027	ZIC3_ZIC4	ENST00000370903.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr20_+_3870024_3870072	0.222279	ZIC3_ZIC4	ENST00000610179.1|PANK2|ENSG00000125779.17|pantothenate kinase 2
hg19_v2_chr2_+_134877740_134877762	0.221531	ZIC3_ZIC4	ENST00000409645.1|MGAT5|ENSG00000152127.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
hg19_v2_chr14_-_64971288_64971316	0.221267	ZIC3_ZIC4	ENST00000394715.1|ZBTB25|ENSG00000089775.7|zinc finger and BTB domain containing 25
hg19_v2_chr9_-_34662651_34662689	0.220209	ZIC3_ZIC4	ENST00000259631.4|CCL27|ENSG00000213927.3|chemokine (C-C motif) ligand 27
hg19_v2_chr12_+_121163538_121163599	0.218442	ZIC3_ZIC4	ENST00000242592.4|ACADS|ENSG00000122971.4|acyl-CoA dehydrogenase, C-2 to C-3 short chain
hg19_v2_chr10_+_127408263_127408308	0.217481	ZIC3_ZIC4	ENST00000337623.3|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr1_-_161147275_161147322	0.216317	ZIC3_ZIC4	ENST00000319769.5|B4GALT3|ENSG00000158850.10|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 	ENST00000367998.1|B4GALT3|ENSG00000158850.10|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
hg19_v2_chr16_+_2570340_2570426	0.215683	ZIC3_ZIC4	ENST00000568263.1|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2 	ENST00000293971.6|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2 	ENST00000302956.4|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2 	ENST00000413459.3|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2 	ENST00000566706.1|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2 	ENST00000569879.1|AMDHD2|ENSG00000162066.10|amidohydrolase domain containing 2
hg19_v2_chr10_-_105212141_105212183	0.21497	ZIC3_ZIC4	ENST00000369788.3|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr2_+_74781828_74781898	0.213962	ZIC3_ZIC4	ENST00000340004.6|DOK1|ENSG00000115325.9|docking protein 1, 62kDa (downstream of tyrosine kinase 1)
hg19_v2_chr7_-_140178726_140178774	0.213223	ZIC3_ZIC4	ENST00000480552.1|MKRN1|ENSG00000133606.6|makorin ring finger protein 1
hg19_v2_chrX_-_130423240_130423288	0.213029	ZIC3_ZIC4	ENST00000370910.1|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1 	ENST00000370901.4|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr15_-_66790146_66790161	0.212825	ZIC3_ZIC4	ENST00000316634.5|SNAPC5|ENSG00000174446.8|small nuclear RNA activating complex, polypeptide 5, 19kDa
hg19_v2_chr3_+_38495333_38495422	0.212702	ZIC3_ZIC4	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr12_-_48213568_48213695	0.211822	ZIC3_ZIC4	ENST00000080059.7|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000354334.3|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000430670.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000552960.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000440293.1|HDAC7|ENSG00000061273.13|histone deacetylase 7
hg19_v2_chr19_+_59055814_59055840	0.209285	ZIC3_ZIC4	ENST00000594806.1|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000253024.5|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000341753.6|TRIM28|ENSG00000130726.7|tripartite motif containing 28
hg19_v2_chr14_+_24641062_24641246	0.208686	ZIC3_ZIC4	ENST00000311457.3|REC8|ENSG00000100918.8|REC8 meiotic recombination protein 	ENST00000557806.1|REC8|ENSG00000100918.8|REC8 meiotic recombination protein 	ENST00000559919.1|REC8|ENSG00000100918.8|REC8 meiotic recombination protein
hg19_v2_chr2_+_79740118_79740210	0.20787	ZIC3_ZIC4	ENST00000496558.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2 	ENST00000451966.1|CTNNA2|ENSG00000066032.14|catenin (cadherin-associated protein), alpha 2
hg19_v2_chr14_+_105886150_105886229	0.206624	ZIC3_ZIC4	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr12_-_51420108_51420124	0.205958	ZIC3_ZIC4	ENST00000547198.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr20_-_62129163_62129193	0.203032	ZIC3_ZIC4	ENST00000298049.7|EEF1A2|ENSG00000101210.6|eukaryotic translation elongation factor 1 alpha 2
hg19_v2_chr4_+_115519577_115519631	0.202491	ZIC3_ZIC4	ENST00000310836.6|UGT8|ENSG00000174607.6|UDP glycosyltransferase 8
hg19_v2_chr3_-_9811595_9811666	0.202443	ZIC3_ZIC4	ENST00000256460.3|CAMK1|ENSG00000134072.6|calcium/calmodulin-dependent protein kinase I
hg19_v2_chr2_-_11484710_11484812	0.202421	ZIC3_ZIC4	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr10_+_14920843_14920921	0.201498	ZIC3_ZIC4	ENST00000433779.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000378325.3|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000354919.6|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000313519.5|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila) 	ENST00000420416.1|SUV39H2|ENSG00000152455.11|suppressor of variegation 3-9 homolog 2 (Drosophila)
hg19_v2_chr4_+_2819883_2819948	0.201182	ZIC3_ZIC4	ENST00000511747.1|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2 	ENST00000503393.2|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2
hg19_v2_chr11_-_57004658_57004739	0.197099	ZIC3_ZIC4	ENST00000606794.1|APLNR|ENSG00000134817.9|apelin receptor
hg19_v2_chr12_-_48152853_48152879	0.194549	ZIC3_ZIC4	ENST00000171000.4|RAPGEF3|ENSG00000079337.11|Rap guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr16_+_58497567_58497586	0.191403	ZIC3_ZIC4	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr14_-_95942173_95942173	0.186482	ZIC3_ZIC4	ENST00000334258.5|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3 	ENST00000557275.1|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3 	ENST00000553340.1|SYNE3|ENSG00000176438.8|spectrin repeat containing, nuclear envelope family member 3
hg19_v2_chr19_+_10362882_10362952	0.185997	ZIC3_ZIC4	ENST00000393733.2|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000588502.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4
hg19_v2_chr1_+_3607228_3607250	0.185322	ZIC3_ZIC4	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr13_-_41345277_41345350	0.183119	ZIC3_ZIC4	ENST00000323563.6|MRPS31|ENSG00000102738.6|mitochondrial ribosomal protein S31
hg19_v2_chr20_-_62601218_62601291	0.183023	ZIC3_ZIC4	ENST00000369888.1|ZNF512B|ENSG00000196700.3|zinc finger protein 512B
hg19_v2_chr4_-_121993673_121993698	0.182424	ZIC3_ZIC4	ENST00000379692.4|NDNF|ENSG00000173376.9|neuron-derived neurotrophic factor
hg19_v2_chr1_+_28995231_28995250	0.181667	ZIC3_ZIC4	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr3_+_38179969_38180192	0.181127	ZIC3_ZIC4	ENST00000396334.3|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000417037.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000424893.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000495303.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000443433.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000421516.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88
hg19_v2_chrX_+_51927919_51927991	0.18102	ZIC3_ZIC4	ENST00000416960.1|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr6_+_44238203_44238222	0.179601	ZIC3_ZIC4	ENST00000451188.2|TMEM151B|ENSG00000178233.13|transmembrane protein 151B
hg19_v2_chr14_+_91580357_91580454	0.178489	ZIC3_ZIC4	ENST00000298858.4|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521081.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000520328.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000256324.10|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000524232.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522170.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000519950.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523879.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521077.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000518665.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr14_+_91580708_91580730	0.17792	ZIC3_ZIC4	ENST00000518868.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr19_-_12992244_12992272	0.177189	ZIC3_ZIC4	ENST00000538460.1|DNASE2|ENSG00000105612.4|deoxyribonuclease II, lysosomal
hg19_v2_chr6_+_15246501_15246527	0.176611	ZIC3_ZIC4	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr15_-_91565770_91565840	0.176327	ZIC3_ZIC4	ENST00000535906.1|VPS33B|ENSG00000184056.10|vacuolar protein sorting 33 homolog B (yeast) 	ENST00000333371.3|VPS33B|ENSG00000184056.10|vacuolar protein sorting 33 homolog B (yeast)
hg19_v2_chr4_-_168155169_168155214	0.174971	ZIC3_ZIC4	ENST00000534949.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000535728.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr16_+_58059470_58059470	0.173692	ZIC3_ZIC4	ENST00000219271.3|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr19_+_589893_589911	0.172696	ZIC3_ZIC4	ENST00000251287.2|HCN2|ENSG00000099822.2|hyperpolarization activated cyclic nucleotide-gated potassium channel 2
hg19_v2_chr17_-_4871085_4871167	0.170829	ZIC3_ZIC4	ENST00000575142.1|SPAG7|ENSG00000091640.3|sperm associated antigen 7 	ENST00000206020.3|SPAG7|ENSG00000091640.3|sperm associated antigen 7
hg19_v2_chr21_+_45725050_45725211	0.170088	ZIC3_ZIC4	ENST00000403390.1|PFKL|ENSG00000141959.12|phosphofructokinase, liver
hg19_v2_chr12_-_12503156_12503216	0.170055	ZIC3_ZIC4	ENST00000543314.1|MANSC1|ENSG00000111261.9|MANSC domain containing 1 	ENST00000396349.3|MANSC1|ENSG00000111261.9|MANSC domain containing 1
hg19_v2_chr1_+_114471809_114471855	0.169937	ZIC3_ZIC4	ENST00000426820.2|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr4_+_81951957_81952119	0.169657	ZIC3_ZIC4	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr10_-_105212059_105212110	0.169603	ZIC3_ZIC4	ENST00000260743.5|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr7_+_150020329_150020359	0.169488	ZIC3_ZIC4	ENST00000323078.7|LRRC61|ENSG00000127399.10|leucine rich repeat containing 61
hg19_v2_chr2_+_48757278_48757337	0.169281	ZIC3_ZIC4	ENST00000404752.1|STON1|ENSG00000243244.1|stonin 1 	ENST00000406226.1|STON1|ENSG00000243244.1|stonin 1
hg19_v2_chr12_-_121734489_121734564	0.168746	ZIC3_ZIC4	ENST00000412367.2|CAMKK2|ENSG00000110931.14|calcium/calmodulin-dependent protein kinase kinase 2, beta 	ENST00000402834.4|CAMKK2|ENSG00000110931.14|calcium/calmodulin-dependent protein kinase kinase 2, beta 	ENST00000404169.3|CAMKK2|ENSG00000110931.14|calcium/calmodulin-dependent protein kinase kinase 2, beta
hg19_v2_chr1_+_146714291_146714420	0.168377	ZIC3_ZIC4	ENST00000431239.1|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369259.3|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369258.4|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000361293.5|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like
hg19_v2_chr19_-_49314269_49314293	0.167649	ZIC3_ZIC4	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr7_+_73498118_73498270	0.166761	ZIC3_ZIC4	ENST00000336180.2|LIMK1|ENSG00000106683.10|LIM domain kinase 1
hg19_v2_chr16_+_29465822_29465883	0.164345	ZIC3_ZIC4	ENST00000330181.5|SLX1B|ENSG00000181625.13|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) 	ENST00000351581.4|SLX1B|ENSG00000181625.13|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)
hg19_v2_chr9_-_140351928_140351989	0.1619	ZIC3_ZIC4	ENST00000339554.3|NSMF|ENSG00000165802.15|NMDA receptor synaptonuclear signaling and neuronal migration factor
hg19_v2_chr14_+_91580777_91580793	0.161837	ZIC3_ZIC4	ENST00000525393.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000428926.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517362.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chrX_-_153881842_153881853	0.158076	ZIC3_ZIC4	ENST00000369585.3|CTAG2|ENSG00000126890.13|cancer/testis antigen 2 	ENST00000247306.4|CTAG2|ENSG00000126890.13|cancer/testis antigen 2
hg19_v2_chrX_+_123094672_123094729	0.157485	ZIC3_ZIC4	ENST00000354548.5|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000458700.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr11_+_47291193_47291267	0.15736	ZIC3_ZIC4	ENST00000428807.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000402799.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000406482.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000349238.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000311027.5|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000407859.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000395344.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000444117.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chr1_+_28995258_28995322	0.156908	ZIC3_ZIC4	ENST00000361872.4|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1 	ENST00000294409.2|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr2_-_64881018_64881064	0.155706	ZIC3_ZIC4	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr22_-_31328881_31328881	0.154881	ZIC3_ZIC4	ENST00000445980.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr17_-_73178599_73178714	0.154206	ZIC3_ZIC4	ENST00000578238.1|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2
hg19_v2_chr22_+_19705928_19706048	0.153277	ZIC3_ZIC4	ENST00000383045.3|SEPT5|ENSG00000184702.13|septin 5 	ENST00000438754.2|SEPT5|ENSG00000184702.13|septin 5
hg19_v2_chr3_-_194090460_194090479	0.15262	ZIC3_ZIC4	ENST00000428839.1|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15 	ENST00000347624.3|LRRC15|ENSG00000172061.7|leucine rich repeat containing 15
hg19_v2_chr6_-_693074_693150	0.152522	ZIC3_ZIC4	ENST00000230449.4|EXOC2|ENSG00000112685.9|exocyst complex component 2 	ENST00000443083.1|EXOC2|ENSG00000112685.9|exocyst complex component 2 	ENST00000448181.3|EXOC2|ENSG00000112685.9|exocyst complex component 2
hg19_v2_chr14_+_105886275_105886299	0.1524	ZIC3_ZIC4	ENST00000405646.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr7_+_150020363_150020477	0.152084	ZIC3_ZIC4	ENST00000359623.4|LRRC61|ENSG00000127399.10|leucine rich repeat containing 61 	ENST00000493307.1|LRRC61|ENSG00000127399.10|leucine rich repeat containing 61
hg19_v2_chr19_+_54926601_54926619	0.151847	ZIC3_ZIC4	ENST00000301194.4|TTYH1|ENSG00000167614.9|tweety family member 1
hg19_v2_chr17_-_42297092_42297118	0.151463	ZIC3_ZIC4	ENST00000393606.3|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr14_+_91580732_91580746	0.151067	ZIC3_ZIC4	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chrX_-_54070607_54070726	0.149533	ZIC3_ZIC4	ENST00000338154.6|PHF8|ENSG00000172943.14|PHD finger protein 8 	ENST00000338946.6|PHF8|ENSG00000172943.14|PHD finger protein 8
hg19_v2_chr19_+_10362577_10362686	0.14923	ZIC3_ZIC4	ENST00000592514.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000307422.5|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000253099.6|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000590150.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000590669.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4
hg19_v2_chr16_-_29466285_29466285	0.149061	ZIC3_ZIC4	ENST00000330978.3|BOLA2|ENSG00000183336.7|bolA family member 2
hg19_v2_chr22_-_19165917_19166034	0.14804	ZIC3_ZIC4	ENST00000451283.1|SLC25A1|ENSG00000100075.5|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
hg19_v2_chr11_+_129245796_129245835	0.147817	ZIC3_ZIC4	ENST00000281437.4|BARX2|ENSG00000043039.5|BARX homeobox 2
hg19_v2_chrX_+_123095546_123095644	0.142749	ZIC3_ZIC4	ENST00000371157.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371145.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371144.3|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr3_+_184098065_184098119	0.142664	ZIC3_ZIC4	ENST00000348986.3|CHRD|ENSG00000090539.11|chordin
hg19_v2_chr16_+_30205225_30205238	0.14201	ZIC3_ZIC4	ENST00000345535.4|SLX1A|ENSG00000132207.13|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae) 	ENST00000251303.6|SLX1A|ENSG00000132207.13|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)
hg19_v2_chr20_-_3154162_3154232	0.141824	ZIC3_ZIC4	ENST00000360342.3|LZTS3|ENSG00000088899.10|Homo sapiens leucine zipper, putative tumor suppressor family member 3 (LZTS3), mRNA.
hg19_v2_chr20_-_47894936_47895010	0.140392	ZIC3_ZIC4	ENST00000371754.4|ZNFX1|ENSG00000124201.10|zinc finger, NFX1-type containing 1
hg19_v2_chr15_+_65822756_65822893	0.140318	ZIC3_ZIC4	ENST00000562901.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000261875.5|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000442729.2|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000565299.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000568793.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr1_-_235814048_235814067	0.140209	ZIC3_ZIC4	ENST00000450593.1|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4 	ENST00000366598.4|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4
hg19_v2_chr10_+_28966271_28966437	0.139496	ZIC3_ZIC4	ENST00000375533.3|BAMBI|ENSG00000095739.7|BMP and activin membrane-bound inhibitor
hg19_v2_chr10_+_71561704_71561874	0.138262	ZIC3_ZIC4	ENST00000520267.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr15_-_91565743_91565764	0.138034	ZIC3_ZIC4	ENST00000535843.1|VPS33B|ENSG00000184056.10|vacuolar protein sorting 33 homolog B (yeast)
hg19_v2_chrX_+_152783131_152783151	0.137024	ZIC3_ZIC4	ENST00000349466.2|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3 	ENST00000370186.1|ATP2B3|ENSG00000067842.13|ATPase, Ca++ transporting, plasma membrane 3
hg19_v2_chr16_-_402639_402707	0.136538	ZIC3_ZIC4	ENST00000262320.3|AXIN1|ENSG00000103126.10|axin 1
hg19_v2_chr19_+_41313017_41313148	0.134218	ZIC3_ZIC4	ENST00000595621.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2 	ENST00000595051.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2
hg19_v2_chr10_-_43903217_43903267	0.133824	ZIC3_ZIC4	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr11_+_1074870_1074902	0.133747	ZIC3_ZIC4	ENST00000441003.2|MUC2|ENSG00000198788.7|mucin 2, oligomeric mucus/gel-forming 	ENST00000359061.5|MUC2|ENSG00000198788.7|mucin 2, oligomeric mucus/gel-forming
hg19_v2_chr7_+_37888199_37888212	0.133527	ZIC3_ZIC4	ENST00000199447.4|NME8|ENSG00000086288.7|NME/NM23 family member 8 	ENST00000455500.1|NME8|ENSG00000086288.7|NME/NM23 family member 8
hg19_v2_chr3_-_133614597_133614681	0.13193	ZIC3_ZIC4	ENST00000285208.4|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family 	ENST00000460865.3|RAB6B|ENSG00000154917.6|RAB6B, member RAS oncogene family
hg19_v2_chr10_-_13390021_13390040	0.131384	ZIC3_ZIC4	ENST00000537130.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr19_-_49314169_49314194	0.130508	ZIC3_ZIC4	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr17_+_79761997_79762034	0.130354	ZIC3_ZIC4	ENST00000400723.3|GCGR|ENSG00000215644.5|glucagon receptor 	ENST00000570996.1|GCGR|ENSG00000215644.5|glucagon receptor
hg19_v2_chr17_+_45331184_45331263	0.127643	ZIC3_ZIC4	ENST00000559488.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000571680.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000435993.2|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
hg19_v2_chr11_-_67272794_67272855	0.123568	ZIC3_ZIC4	ENST00000436757.2|PITPNM1|ENSG00000110697.8|phosphatidylinositol transfer protein, membrane-associated 1 	ENST00000356404.3|PITPNM1|ENSG00000110697.8|phosphatidylinositol transfer protein, membrane-associated 1
hg19_v2_chr1_+_26737292_26737322	0.123323	ZIC3_ZIC4	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr9_+_19230433_19230519	0.122613	ZIC3_ZIC4	ENST00000434457.2|DENND4C|ENSG00000137145.16|DENN/MADD domain containing 4C 	ENST00000602925.1|DENND4C|ENSG00000137145.16|DENN/MADD domain containing 4C
hg19_v2_chr4_-_110624564_110624739	0.122416	ZIC3_ZIC4	ENST00000352981.3|CASP6|ENSG00000138794.5|caspase 6, apoptosis-related cysteine peptidase 	ENST00000265164.2|CASP6|ENSG00000138794.5|caspase 6, apoptosis-related cysteine peptidase 	ENST00000505486.1|CASP6|ENSG00000138794.5|caspase 6, apoptosis-related cysteine peptidase
hg19_v2_chr11_+_86748863_86748948	0.122031	ZIC3_ZIC4	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr8_-_41522779_41522804	0.120384	ZIC3_ZIC4	ENST00000522231.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000314214.8|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000348036.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000457297.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000522543.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr10_+_51572339_51572376	0.11934	ZIC3_ZIC4	ENST00000344348.6|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr12_-_57400227_57400245	0.117691	ZIC3_ZIC4	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr7_-_100808843_100808874	0.117553	ZIC3_ZIC4	ENST00000249330.2|VGF|ENSG00000128564.5|VGF nerve growth factor inducible
hg19_v2_chr14_+_100848311_100848337	0.117468	ZIC3_ZIC4	ENST00000542471.2|WDR25|ENSG00000176473.9|WD repeat domain 25
hg19_v2_chr11_-_65430554_65430579	0.117401	ZIC3_ZIC4	ENST00000308639.9|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000406246.3|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr1_-_235813290_235813323	0.116781	ZIC3_ZIC4	ENST00000391854.2|GNG4|ENSG00000168243.6|guanine nucleotide binding protein (G protein), gamma 4
hg19_v2_chr19_-_18385221_18385245	0.116658	ZIC3_ZIC4	ENST00000595654.2|KIAA1683|ENSG00000130518.12|KIAA1683 	ENST00000593659.1|KIAA1683|ENSG00000130518.12|KIAA1683 	ENST00000599528.1|KIAA1683|ENSG00000130518.12|KIAA1683
hg19_v2_chr9_+_100174344_100174474	0.116391	ZIC3_ZIC4	ENST00000422139.2|TDRD7|ENSG00000196116.6|tudor domain containing 7
hg19_v2_chr5_-_132948216_132948255	0.115495	ZIC3_ZIC4	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr3_+_12330560_12330579	0.114191	ZIC3_ZIC4	ENST00000397026.2|PPARG|ENSG00000132170.15|peroxisome proliferator-activated receptor gamma
hg19_v2_chr11_+_120382417_120382511	0.114087	ZIC3_ZIC4	ENST00000527524.2|GRIK4|ENSG00000149403.7|glutamate receptor, ionotropic, kainate 4 	ENST00000375081.2|AP002348.1|ENSG00000204306.2|Uncharacterized protein
hg19_v2_chr3_-_33759699_33759848	0.112882	ZIC3_ZIC4	ENST00000399362.4|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000359576.5|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000307312.7|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr19_+_49122785_49122799	0.112599	ZIC3_ZIC4	ENST00000598088.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr17_-_74137374_74137385	0.112009	ZIC3_ZIC4	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr14_+_64971292_64971415	0.111365	ZIC3_ZIC4	ENST00000358738.3|ZBTB1|ENSG00000126804.9|zinc finger and BTB domain containing 1 	ENST00000394712.2|ZBTB1|ENSG00000126804.9|zinc finger and BTB domain containing 1
hg19_v2_chr17_-_50236039_50236087	0.110276	ZIC3_ZIC4	ENST00000451037.2|CA10|ENSG00000154975.9|carbonic anhydrase X
hg19_v2_chr7_-_150020578_150020682	0.109835	ZIC3_ZIC4	ENST00000478393.1|ACTR3C|ENSG00000106526.6|ARP3 actin-related protein 3 homolog C (yeast)
hg19_v2_chr11_+_121322832_121322912	0.109637	ZIC3_ZIC4	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr1_-_151119087_151119114	0.108082	ZIC3_ZIC4	ENST00000341697.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENST00000368914.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v2_chr12_+_132312931_132313085	0.106801	ZIC3_ZIC4	ENST00000360564.1|MMP17|ENSG00000198598.2|matrix metallopeptidase 17 (membrane-inserted) 	ENST00000545671.1|MMP17|ENSG00000198598.2|matrix metallopeptidase 17 (membrane-inserted) 	ENST00000545790.1|MMP17|ENSG00000198598.2|matrix metallopeptidase 17 (membrane-inserted)
hg19_v2_chr21_-_45681765_45681773	0.10646	ZIC3_ZIC4	ENST00000431166.1|DNMT3L|ENSG00000142182.4|DNA (cytosine-5-)-methyltransferase 3-like
hg19_v2_chr4_-_2965052_2965162	0.105881	ZIC3_ZIC4	ENST00000398071.4|NOP14|ENSG00000087269.11|NOP14 nucleolar protein 	ENST00000502735.1|NOP14|ENSG00000087269.11|NOP14 nucleolar protein 	ENST00000314262.6|NOP14|ENSG00000087269.11|NOP14 nucleolar protein 	ENST00000416614.2|NOP14|ENSG00000087269.11|NOP14 nucleolar protein
hg19_v2_chr2_+_109150850_109150869	0.105292	ZIC3_ZIC4	ENST00000544547.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr11_-_71159458_71159481	0.104375	ZIC3_ZIC4	ENST00000355527.3|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase
hg19_v2_chr19_+_49122548_49122777	0.104184	ZIC3_ZIC4	ENST00000245222.4|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000340932.3|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000601712.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000600537.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr1_+_26737253_26737269	0.103628	ZIC3_ZIC4	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr3_-_33759541_33759573	0.103625	ZIC3_ZIC4	ENST00000468888.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr20_-_2644832_2644870	0.103102	ZIC3_ZIC4	ENST00000380851.5|IDH3B|ENSG00000101365.16|isocitrate dehydrogenase 3 (NAD+) beta 	ENST00000380843.4|IDH3B|ENSG00000101365.16|isocitrate dehydrogenase 3 (NAD+) beta
hg19_v2_chr11_-_67275542_67275562	0.103051	ZIC3_ZIC4	ENST00000531506.1|CDK2AP2|ENSG00000167797.3|cyclin-dependent kinase 2 associated protein 2
hg19_v2_chr1_+_3569129_3569150	0.102175	ZIC3_ZIC4	ENST00000354437.4|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000357733.3|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000346387.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr19_+_54926621_54926700	0.102084	ZIC3_ZIC4	ENST00000376530.3|TTYH1|ENSG00000167614.9|tweety family member 1 	ENST00000445095.1|TTYH1|ENSG00000167614.9|tweety family member 1 	ENST00000391739.3|TTYH1|ENSG00000167614.9|tweety family member 1 	ENST00000376531.3|TTYH1|ENSG00000167614.9|tweety family member 1
hg19_v2_chr11_-_32457075_32457095	0.101309	ZIC3_ZIC4	ENST00000448076.3|WT1|ENSG00000184937.8|Wilms tumor 1
hg19_v2_chr17_-_42276574_42276742	0.100616	ZIC3_ZIC4	ENST00000589805.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr16_-_30205627_30205627	0.0954607	ZIC3_ZIC4	ENST00000305321.4|BOLA2B|ENSG00000169627.7|bolA family member 2B
hg19_v2_chr16_-_8962544_8962584	0.0938796	ZIC3_ZIC4	ENST00000570125.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa
hg19_v2_chr13_-_95131923_95131944	0.0926521	ZIC3_ZIC4	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr19_-_48894762_48894830	0.0922026	ZIC3_ZIC4	ENST00000600980.1|KDELR1|ENSG00000105438.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 	ENST00000330720.2|KDELR1|ENSG00000105438.4|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1
hg19_v2_chr11_+_76092353_76092400	0.0921241	ZIC3_ZIC4	ENST00000530460.1|RP11-111M22.2|ENSG00000179240.4|Homo sapiens putative uncharacterized protein FLJ37770-like (LOC100506127), mRNA. 	ENST00000321844.4|RP11-111M22.2|ENSG00000179240.4|Homo sapiens putative uncharacterized protein FLJ37770-like (LOC100506127), mRNA.
hg19_v2_chr1_-_45308616_45308735	0.0913945	ZIC3_ZIC4	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr5_+_133707252_133707295	0.0910073	ZIC3_ZIC4	ENST00000506787.1|UBE2B|ENSG00000119048.3|ubiquitin-conjugating enzyme E2B 	ENST00000507277.1|UBE2B|ENSG00000119048.3|ubiquitin-conjugating enzyme E2B
hg19_v2_chr7_-_752577_752844	0.0898425	ZIC3_ZIC4	ENST00000544935.1|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta 	ENST00000430040.1|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta 	ENST00000456696.2|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta 	ENST00000406797.1|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta
hg19_v2_chr12_+_58176525_58176601	0.0882089	ZIC3_ZIC4	ENST00000543727.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000540550.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000323833.8|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000350762.5|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000550559.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000548851.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000434359.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000457189.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial
hg19_v2_chr3_+_11196206_11196220	0.0880995	ZIC3_ZIC4	ENST00000431010.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr19_-_6424783_6424805	0.0872433	ZIC3_ZIC4	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr10_+_50818343_50818362	0.0860205	ZIC3_ZIC4	ENST00000374115.3|SLC18A3|ENSG00000187714.5|solute carrier family 18 (vesicular acetylcholine transporter), member 3
hg19_v2_chr1_-_11866034_11866115	0.085105	ZIC3_ZIC4	ENST00000376590.3|MTHFR|ENSG00000177000.6|methylenetetrahydrofolate reductase (NAD(P)H)
hg19_v2_chr17_-_56065484_56065513	0.0847672	ZIC3_ZIC4	ENST00000581208.1|VEZF1|ENSG00000136451.4|vascular endothelial zinc finger 1
hg19_v2_chr5_+_154092396_154092462	0.0838639	ZIC3_ZIC4	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr7_-_752074_752209	0.0837951	ZIC3_ZIC4	ENST00000360274.4|PRKAR1B|ENSG00000188191.10|protein kinase, cAMP-dependent, regulatory, type I, beta
hg19_v2_chr4_-_85419603_85419603	0.0825144	ZIC3_ZIC4	ENST00000295886.4|NKX6-1|ENSG00000163623.5|NK6 homeobox 1
hg19_v2_chrX_-_153599578_153599656	0.082304	ZIC3_ZIC4	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr17_-_27893990_27894155	0.0822035	ZIC3_ZIC4	ENST00000307201.4|ABHD15|ENSG00000168792.4|abhydrolase domain containing 15
hg19_v2_chr11_-_74109422_74109518	0.0821723	ZIC3_ZIC4	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr5_-_126366500_126366547	0.0810413	ZIC3_ZIC4	ENST00000308660.5|MARCH3|ENSG00000173926.5|membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
hg19_v2_chr2_-_70529180_70529222	0.0807288	ZIC3_ZIC4	ENST00000450256.1|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A 	ENST00000037869.3|FAM136A|ENSG00000035141.3|family with sequence similarity 136, member A
hg19_v2_chr1_-_43232649_43232755	0.0789492	ZIC3_ZIC4	ENST00000372526.2|LEPRE1|ENSG00000117385.11|leucine proline-enriched proteoglycan (leprecan) 1 	ENST00000236040.4|LEPRE1|ENSG00000117385.11|leucine proline-enriched proteoglycan (leprecan) 1 	ENST00000296388.5|LEPRE1|ENSG00000117385.11|leucine proline-enriched proteoglycan (leprecan) 1 	ENST00000397054.3|LEPRE1|ENSG00000117385.11|leucine proline-enriched proteoglycan (leprecan) 1
hg19_v2_chr15_+_65823092_65823143	0.0788182	ZIC3_ZIC4	ENST00000566074.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr19_-_3062465_3062574	0.0782543	ZIC3_ZIC4	ENST00000327141.4|AES|ENSG00000104964.10|amino-terminal enhancer of split
hg19_v2_chr19_-_14316980_14316999	0.0776917	ZIC3_ZIC4	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr11_-_96239990_96240092	0.0776438	ZIC3_ZIC4	ENST00000511243.2|JRKL-AS1|ENSG00000255679.1|JRKL antisense RNA 1
hg19_v2_chr2_-_99552620_99552722	0.077342	ZIC3_ZIC4	ENST00000428096.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000397899.2|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000420294.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like
hg19_v2_chr20_-_4982132_4982164	0.0766724	ZIC3_ZIC4	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr8_+_38758737_38758763	0.0766715	ZIC3_ZIC4	ENST00000521746.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 	ENST00000420274.1|PLEKHA2|ENSG00000169499.10|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
hg19_v2_chr8_-_70747205_70747299	0.0761233	ZIC3_ZIC4	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr17_-_73179046_73179078	0.076115	ZIC3_ZIC4	ENST00000314523.7|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2 	ENST00000420826.2|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2
hg19_v2_chr11_-_66139199_66139291	0.0758032	ZIC3_ZIC4	ENST00000357440.2|SLC29A2|ENSG00000174669.7|solute carrier family 29 (equilibrative nucleoside transporter), member 2
hg19_v2_chr13_-_52378281_52378315	0.074962	ZIC3_ZIC4	ENST00000218981.1|DHRS12|ENSG00000102796.6|dehydrogenase/reductase (SDR family) member 12
hg19_v2_chr4_-_492891_492968	0.0741349	ZIC3_ZIC4	ENST00000338977.5|ZNF721|ENSG00000182903.11|zinc finger protein 721 	ENST00000511833.2|ZNF721|ENSG00000182903.11|zinc finger protein 721
hg19_v2_chr15_+_80351910_80351955	0.0739924	ZIC3_ZIC4	ENST00000261749.6|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561060.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr10_+_105253661_105253736	0.072936	ZIC3_ZIC4	ENST00000369780.4|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr10_-_13390270_13390316	0.0725546	ZIC3_ZIC4	ENST00000378614.4|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000545675.1|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1 	ENST00000327347.5|SEPHS1|ENSG00000086475.10|selenophosphate synthetase 1
hg19_v2_chr2_-_109605663_109605828	0.0719042	ZIC3_ZIC4	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr20_-_32274179_32274213	0.0711484	ZIC3_ZIC4	ENST00000343380.5|E2F1|ENSG00000101412.9|E2F transcription factor 1
hg19_v2_chr19_-_51587502_51587502	0.0703271	ZIC3_ZIC4	ENST00000156499.2|KLK14|ENSG00000129437.5|kallikrein-related peptidase 14 	ENST00000391802.1|KLK14|ENSG00000129437.5|kallikrein-related peptidase 14
hg19_v2_chr19_-_12992274_12992332	0.069714	ZIC3_ZIC4	ENST00000592506.1|DNASE2|ENSG00000105612.4|deoxyribonuclease II, lysosomal 	ENST00000222219.3|DNASE2|ENSG00000105612.4|deoxyribonuclease II, lysosomal
hg19_v2_chr4_-_168155300_168155324	0.0690189	ZIC3_ZIC4	ENST00000541637.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr1_+_3569072_3569093	0.0689817	ZIC3_ZIC4	ENST00000378295.4|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000604074.1|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr17_-_79481666_79481785	0.0685818	ZIC3_ZIC4	ENST00000575659.1|ACTG1|ENSG00000184009.5|actin, gamma 1
hg19_v2_chrX_+_70503433_70503517	0.0684649	ZIC3_ZIC4	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr2_-_197791441_197791525	0.0683037	ZIC3_ZIC4	ENST00000409475.1|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000354764.4|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1 	ENST00000374738.3|PGAP1|ENSG00000197121.10|post-GPI attachment to proteins 1
hg19_v2_chr22_+_46731596_46731658	0.0675151	ZIC3_ZIC4	ENST00000381019.3|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chr7_-_96654133_96654409	0.0673677	ZIC3_ZIC4	ENST00000486603.2|DLX5|ENSG00000105880.4|distal-less homeobox 5 	ENST00000222598.4|DLX5|ENSG00000105880.4|distal-less homeobox 5
hg19_v2_chr12_-_323689_323719	0.0663465	ZIC3_ZIC4	ENST00000428720.1|SLC6A12|ENSG00000111181.8|solute carrier family 6 (neurotransmitter transporter), member 12
hg19_v2_chr10_+_118350522_118350642	0.065525	ZIC3_ZIC4	ENST00000530319.1|PNLIPRP1|ENSG00000187021.10|pancreatic lipase-related protein 1 	ENST00000527980.1|PNLIPRP1|ENSG00000187021.10|pancreatic lipase-related protein 1 	ENST00000471549.1|PNLIPRP1|ENSG00000187021.10|pancreatic lipase-related protein 1 	ENST00000534537.1|PNLIPRP1|ENSG00000187021.10|pancreatic lipase-related protein 1
hg19_v2_chr8_+_90914073_90914087	0.0653801	ZIC3_ZIC4	ENST00000297438.2|OSGIN2|ENSG00000164823.5|oxidative stress induced growth inhibitor family member 2
hg19_v2_chr10_+_70939983_70940044	0.0652787	ZIC3_ZIC4	ENST00000359655.4|SUPV3L1|ENSG00000156502.9|suppressor of var1, 3-like 1 (S. cerevisiae) 	ENST00000422378.1|SUPV3L1|ENSG00000156502.9|suppressor of var1, 3-like 1 (S. cerevisiae)
hg19_v2_chr2_+_20646824_20646844	0.0648237	ZIC3_ZIC4	ENST00000272233.4|RHOB|ENSG00000143878.8|ras homolog family member B
hg19_v2_chr16_-_74808710_74808735	0.0645481	ZIC3_ZIC4	ENST00000219368.3|FA2H|ENSG00000103089.4|fatty acid 2-hydroxylase 	ENST00000544337.1|FA2H|ENSG00000103089.4|fatty acid 2-hydroxylase
hg19_v2_chr5_+_176873446_176873516	0.0642633	ZIC3_ZIC4	ENST00000507881.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr3_-_33686743_33686807	0.0640084	ZIC3_ZIC4	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr11_-_71159380_71159449	0.0639945	ZIC3_ZIC4	ENST00000525346.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000531364.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000529990.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000527316.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000407721.2|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase
hg19_v2_chr10_+_28821674_28821715	0.063328	ZIC3_ZIC4	ENST00000526722.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil 	ENST00000375646.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil
hg19_v2_chr7_+_37888555_37888621	0.0618661	ZIC3_ZIC4	ENST00000444718.1|NME8|ENSG00000086288.7|NME/NM23 family member 8 	ENST00000440017.1|NME8|ENSG00000086288.7|NME/NM23 family member 8
hg19_v2_chr1_+_33352036_33352054	0.0616802	ZIC3_ZIC4	ENST00000373467.3|HPCA|ENSG00000121905.5|hippocalcin
hg19_v2_chr14_+_29236269_29236287	0.0615286	ZIC3_ZIC4	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr19_+_17186577_17186637	0.0608103	ZIC3_ZIC4	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr16_+_1128781_1128869	0.0591728	ZIC3_ZIC4	ENST00000293897.4|SSTR5|ENSG00000162009.7|somatostatin receptor 5 	ENST00000562758.1|SSTR5|ENSG00000162009.7|somatostatin receptor 5
hg19_v2_chr12_+_56618102_56618211	0.0589109	ZIC3_ZIC4	ENST00000267023.4|NABP2|ENSG00000139579.8|nucleic acid binding protein 2 	ENST00000380198.2|NABP2|ENSG00000139579.8|nucleic acid binding protein 2 	ENST00000341463.5|NABP2|ENSG00000139579.8|nucleic acid binding protein 2
hg19_v2_chr5_+_176873789_176873853	0.0586499	ZIC3_ZIC4	ENST00000323249.3|PRR7|ENSG00000131188.7|proline rich 7 (synaptic) 	ENST00000502922.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr3_-_132441209_132441286	0.0585251	ZIC3_ZIC4	ENST00000383282.2|NPHP3|ENSG00000113971.14|nephronophthisis 3 (adolescent) 	ENST00000326682.8|NPHP3|ENSG00000113971.14|nephronophthisis 3 (adolescent) 	ENST00000343113.4|NPHP3|ENSG00000113971.14|nephronophthisis 3 (adolescent) 	ENST00000337331.5|NPHP3|ENSG00000113971.14|nephronophthisis 3 (adolescent)
hg19_v2_chr20_+_61340179_61340195	0.058258	ZIC3_ZIC4	ENST00000370501.3|NTSR1|ENSG00000101188.4|neurotensin receptor 1 (high affinity)
hg19_v2_chr13_-_24007815_24007872	0.0581031	ZIC3_ZIC4	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr19_+_47759716_47759824	0.0571905	ZIC3_ZIC4	ENST00000221922.6|CCDC9|ENSG00000105321.8|coiled-coil domain containing 9
hg19_v2_chr12_-_99038732_99038891	0.0564599	ZIC3_ZIC4	ENST00000393042.3|IKBIP|ENSG00000166130.10|IKBKB interacting protein 	ENST00000420861.1|IKBIP|ENSG00000166130.10|IKBKB interacting protein 	ENST00000299157.4|IKBIP|ENSG00000166130.10|IKBKB interacting protein 	ENST00000342502.2|IKBIP|ENSG00000166130.10|IKBKB interacting protein
hg19_v2_chr2_+_219824357_219824401	0.0558854	ZIC3_ZIC4	ENST00000302625.4|CDK5R2|ENSG00000171450.4|cyclin-dependent kinase 5, regulatory subunit 2 (p39)
hg19_v2_chr17_-_1083078_1083294	0.0551778	ZIC3_ZIC4	ENST00000574266.1|ABR|ENSG00000159842.10|active BCR-related 	ENST00000302538.5|ABR|ENSG00000159842.10|active BCR-related
hg19_v2_chr8_-_41522719_41522732	0.0548727	ZIC3_ZIC4	ENST00000335651.6|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr2_-_73869508_73869524	0.0545111	ZIC3_ZIC4	ENST00000272425.3|NAT8|ENSG00000144035.3|N-acetyltransferase 8 (GCN5-related, putative)
hg19_v2_chr12_+_20848486_20848542	0.0538652	ZIC3_ZIC4	ENST00000545102.1|SLCO1C1|ENSG00000139155.4|solute carrier organic anion transporter family, member 1C1
hg19_v2_chr1_+_113051400_113051400	0.0531425	ZIC3_ZIC4	ENST00000369684.4|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr13_-_52733510_52733564	0.0530849	ZIC3_ZIC4	ENST00000378101.2|NEK3|ENSG00000136098.12|NIMA-related kinase 3
hg19_v2_chr4_-_168155417_168155483	0.0511253	ZIC3_ZIC4	ENST00000511269.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000506697.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512042.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr11_+_128761220_128761257	0.0507299	ZIC3_ZIC4	ENST00000529694.1|KCNJ5|ENSG00000120457.7|potassium inwardly-rectifying channel, subfamily J, member 5
hg19_v2_chr11_-_66139617_66139685	0.0497004	ZIC3_ZIC4	ENST00000544554.1|SLC29A2|ENSG00000174669.7|solute carrier family 29 (equilibrative nucleoside transporter), member 2 	ENST00000546034.1|SLC29A2|ENSG00000174669.7|solute carrier family 29 (equilibrative nucleoside transporter), member 2
hg19_v2_chr4_-_17513851_17513862	0.0496491	ZIC3_ZIC4	ENST00000281243.5|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr16_-_8962853_8962878	0.0495902	ZIC3_ZIC4	ENST00000565287.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa 	ENST00000311052.5|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa
hg19_v2_chr14_+_56046914_56046973	0.0494791	ZIC3_ZIC4	ENST00000413890.2|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000395309.3|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000554567.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000555498.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr15_+_76196200_76196227	0.0491227	ZIC3_ZIC4	ENST00000308275.3|FBXO22|ENSG00000167196.9|F-box protein 22 	ENST00000453211.2|FBXO22|ENSG00000167196.9|F-box protein 22
hg19_v2_chrX_+_13707235_13707286	0.0490059	ZIC3_ZIC4	ENST00000464506.1|RAB9A|ENSG00000123595.5|RAB9A, member RAS oncogene family
hg19_v2_chr1_+_150954493_150954528	0.0489503	ZIC3_ZIC4	ENST00000368947.4|ANXA9|ENSG00000143412.5|annexin A9
hg19_v2_chr11_+_124492749_124492795	0.0459578	ZIC3_ZIC4	ENST00000531667.1|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1 	ENST00000441174.3|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1 	ENST00000375005.4|TBRG1|ENSG00000154144.8|transforming growth factor beta regulator 1
hg19_v2_chr1_-_36930012_36930038	0.0456616	ZIC3_ZIC4	ENST00000373116.5|MRPS15|ENSG00000116898.7|mitochondrial ribosomal protein S15
hg19_v2_chr18_+_43914159_43914222	0.0446341	ZIC3_ZIC4	ENST00000588679.1|RNF165|ENSG00000141622.9|ring finger protein 165 	ENST00000269439.7|RNF165|ENSG00000141622.9|ring finger protein 165 	ENST00000543885.1|RNF165|ENSG00000141622.9|ring finger protein 165
hg19_v2_chr5_-_148033693_148033716	0.0426372	ZIC3_ZIC4	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr20_+_34129770_34129879	0.0422835	ZIC3_ZIC4	ENST00000348547.2|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000357394.4|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000447986.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000279052.6|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000416206.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000411577.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3 	ENST00000413587.1|ERGIC3|ENSG00000125991.14|ERGIC and golgi 3
hg19_v2_chr20_+_60962143_60962172	0.0418998	ZIC3_ZIC4	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chr5_-_180076613_180076634	0.0418987	ZIC3_ZIC4	ENST00000261937.6|FLT4|ENSG00000037280.11|fms-related tyrosine kinase 4 	ENST00000393347.3|FLT4|ENSG00000037280.11|fms-related tyrosine kinase 4
hg19_v2_chr22_-_38966172_38966291	0.041565	ZIC3_ZIC4	ENST00000216024.2|DMC1|ENSG00000100206.5|DNA meiotic recombinase 1
hg19_v2_chr18_-_51750948_51751059	0.0415428	ZIC3_ZIC4	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr1_-_154928562_154928629	0.041156	ZIC3_ZIC4	ENST00000368463.3|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000539880.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000542459.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000368460.3|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1 	ENST00000368465.1|PBXIP1|ENSG00000163346.12|pre-B-cell leukemia homeobox interacting protein 1
hg19_v2_chr10_+_127408110_127408145	0.0406427	ZIC3_ZIC4	ENST00000356792.4|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr5_-_179498703_179498784	0.039651	ZIC3_ZIC4	ENST00000522208.2|RNF130|ENSG00000113269.9|ring finger protein 130
hg19_v2_chr20_+_49411523_49411535	0.0388872	ZIC3_ZIC4	ENST00000371608.2|BCAS4|ENSG00000124243.13|breast carcinoma amplified sequence 4
hg19_v2_chr11_-_66139570_66139591	0.0387896	ZIC3_ZIC4	ENST00000311161.7|SLC29A2|ENSG00000174669.7|solute carrier family 29 (equilibrative nucleoside transporter), member 2
hg19_v2_chr3_+_155838337_155838382	0.0382086	ZIC3_ZIC4	ENST00000490337.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENST00000389636.5|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr11_+_73019282_73019355	0.0379636	ZIC3_ZIC4	ENST00000263674.3|ARHGEF17|ENSG00000110237.3|Rho guanine nucleotide exchange factor (GEF) 17
hg19_v2_chr11_-_116968987_116969166	0.0376161	ZIC3_ZIC4	ENST00000434315.2|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000292055.4|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375288.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000542607.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000445177.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000375300.1|SIK3|ENSG00000160584.11|SIK family kinase 3 	ENST00000446921.2|SIK3|ENSG00000160584.11|SIK family kinase 3
hg19_v2_chr1_+_11866270_11866317	0.0368926	ZIC3_ZIC4	ENST00000376497.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000376487.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6 	ENST00000376496.3|CLCN6|ENSG00000011021.17|chloride channel, voltage-sensitive 6
hg19_v2_chr4_-_860950_861082	0.036874	ZIC3_ZIC4	ENST00000511980.1|GAK|ENSG00000178950.12|cyclin G associated kinase 	ENST00000510799.1|GAK|ENSG00000178950.12|cyclin G associated kinase
hg19_v2_chr1_-_92951607_92951661	0.0366921	ZIC3_ZIC4	ENST00000427103.1|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr7_+_106809406_106809460	0.0365292	ZIC3_ZIC4	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr6_+_32006159_32006194	0.0364825	ZIC3_ZIC4	ENST00000478281.1|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2 	ENST00000471671.1|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2 	ENST00000435122.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr16_+_2198604_2198644	0.0358114	ZIC3_ZIC4	ENST00000210187.6|RAB26|ENSG00000167964.8|RAB26, member RAS oncogene family
hg19_v2_chr17_+_59477233_59477263	0.0356305	ZIC3_ZIC4	ENST00000240328.3|TBX2|ENSG00000121068.9|T-box 2
hg19_v2_chr19_+_33685490_33685490	0.0354433	ZIC3_ZIC4	ENST00000253193.7|LRP3|ENSG00000130881.9|low density lipoprotein receptor-related protein 3
hg19_v2_chrX_+_106871713_106871793	0.0351778	ZIC3_ZIC4	ENST00000372435.4|PRPS1|ENSG00000147224.6|phosphoribosyl pyrophosphate synthetase 1 	ENST00000372428.4|PRPS1|ENSG00000147224.6|phosphoribosyl pyrophosphate synthetase 1 	ENST00000372419.3|PRPS1|ENSG00000147224.6|phosphoribosyl pyrophosphate synthetase 1 	ENST00000543248.1|PRPS1|ENSG00000147224.6|phosphoribosyl pyrophosphate synthetase 1
hg19_v2_chr4_-_168155577_168155661	0.035092	ZIC3_ZIC4	ENST00000541354.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000509854.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512681.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000421836.2|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510741.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510403.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chrX_+_2746850_2746863	0.0343773	ZIC3_ZIC4	ENST00000381163.3|GYG2|ENSG00000056998.14|glycogenin 2 	ENST00000338623.5|GYG2|ENSG00000056998.14|glycogenin 2 	ENST00000542787.1|GYG2|ENSG00000056998.14|glycogenin 2
hg19_v2_chr12_+_111471828_111471975	0.0343523	ZIC3_ZIC4	ENST00000261726.6|CUX2|ENSG00000111249.9|cut-like homeobox 2
hg19_v2_chr16_+_58035277_58035361	0.0335091	ZIC3_ZIC4	ENST00000219281.3|USB1|ENSG00000103005.7|U6 snRNA biogenesis 1 	ENST00000539737.2|USB1|ENSG00000103005.7|U6 snRNA biogenesis 1 	ENST00000423271.3|USB1|ENSG00000103005.7|U6 snRNA biogenesis 1 	ENST00000561568.1|USB1|ENSG00000103005.7|U6 snRNA biogenesis 1 	ENST00000563149.1|USB1|ENSG00000103005.7|U6 snRNA biogenesis 1
hg19_v2_chr19_-_1174226_1174287	0.0330148	ZIC3_ZIC4	ENST00000587024.1|SBNO2|ENSG00000064932.11|strawberry notch homolog 2 (Drosophila) 	ENST00000361757.3|SBNO2|ENSG00000064932.11|strawberry notch homolog 2 (Drosophila)
hg19_v2_chr16_-_8962200_8962258	0.0327189	ZIC3_ZIC4	ENST00000562843.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa 	ENST00000561530.1|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa 	ENST00000396593.2|CARHSP1|ENSG00000153048.6|calcium regulated heat stable protein 1, 24kDa
hg19_v2_chr5_-_14871866_14871916	0.032465	ZIC3_ZIC4	ENST00000284268.6|ANKH|ENSG00000154122.8|ANKH inorganic pyrophosphate transport regulator
hg19_v2_chr1_-_40105617_40105617	0.0318515	ZIC3_ZIC4	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr15_-_66790047_66790132	0.0315365	ZIC3_ZIC4	ENST00000566658.1|SNAPC5|ENSG00000174446.8|small nuclear RNA activating complex, polypeptide 5, 19kDa 	ENST00000563480.2|SNAPC5|ENSG00000174446.8|small nuclear RNA activating complex, polypeptide 5, 19kDa 	ENST00000395589.2|SNAPC5|ENSG00000174446.8|small nuclear RNA activating complex, polypeptide 5, 19kDa 	ENST00000307979.7|SNAPC5|ENSG00000174446.8|small nuclear RNA activating complex, polypeptide 5, 19kDa
hg19_v2_chr2_+_103236004_103236166	0.0309167	ZIC3_ZIC4	ENST00000233969.2|SLC9A2|ENSG00000115616.2|solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
hg19_v2_chr10_+_85954377_85954438	0.0305807	ZIC3_ZIC4	ENST00000332904.3|CDHR1|ENSG00000148600.10|cadherin-related family member 1 	ENST00000372117.3|CDHR1|ENSG00000148600.10|cadherin-related family member 1
hg19_v2_chr19_+_47523058_47523114	0.0296314	ZIC3_ZIC4	ENST00000602212.1|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1 	ENST00000602189.1|NPAS1|ENSG00000130751.5|neuronal PAS domain protein 1
hg19_v2_chr9_+_131843377_131843413	0.0295475	ZIC3_ZIC4	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr16_+_56623433_56623452	0.0287242	ZIC3_ZIC4	ENST00000570176.1|MT3|ENSG00000087250.4|metallothionein 3
hg19_v2_chr14_-_93651186_93651273	0.0287152	ZIC3_ZIC4	ENST00000556883.1|MOAP1|ENSG00000165943.4|modulator of apoptosis 1 	ENST00000298894.4|MOAP1|ENSG00000165943.4|modulator of apoptosis 1
hg19_v2_chr10_+_71561630_71561644	0.0284269	ZIC3_ZIC4	ENST00000398974.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398971.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398968.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398966.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398964.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398969.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000356340.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398972.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398973.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr8_-_67976509_67976509	0.0277881	ZIC3_ZIC4	ENST00000518747.1|COPS5|ENSG00000121022.9|COP9 signalosome subunit 5
hg19_v2_chr5_-_179499086_179499105	0.0273885	ZIC3_ZIC4	ENST00000261947.4|RNF130|ENSG00000113269.9|ring finger protein 130
hg19_v2_chr18_+_9913977_9914088	0.0271357	ZIC3_ZIC4	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr16_-_67840442_67840555	0.0270301	ZIC3_ZIC4	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr14_+_56046990_56047042	0.025472	ZIC3_ZIC4	ENST00000438792.2|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000395314.3|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000395308.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr19_-_49122384_49122447	0.0241096	ZIC3_ZIC4	ENST00000550973.1|RPL18|ENSG00000063177.8|ribosomal protein L18 	ENST00000550645.1|RPL18|ENSG00000063177.8|ribosomal protein L18 	ENST00000549273.1|RPL18|ENSG00000063177.8|ribosomal protein L18 	ENST00000552588.1|RPL18|ENSG00000063177.8|ribosomal protein L18
hg19_v2_chr11_+_637246_637307	0.0240602	ZIC3_ZIC4	ENST00000176183.5|DRD4|ENSG00000069696.6|dopamine receptor D4
hg19_v2_chr15_+_73976715_73976843	0.0239984	ZIC3_ZIC4	ENST00000558689.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000560786.2|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561213.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000563584.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561416.1|CD276|ENSG00000103855.13|CD276 molecule
hg19_v2_chr16_+_69345243_69345312	0.0237188	ZIC3_ZIC4	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr16_+_28996572_28996739	0.0231813	ZIC3_ZIC4	ENST00000360872.5|LAT|ENSG00000213658.6|linker for activation of T cells 	ENST00000566177.1|LAT|ENSG00000213658.6|linker for activation of T cells 	ENST00000354453.4|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr2_-_51259229_51259279	0.0231264	ZIC3_ZIC4	ENST00000405472.3|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr3_+_50712672_50712703	0.0228126	ZIC3_ZIC4	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr19_+_49617581_49617607	0.0227902	ZIC3_ZIC4	ENST00000391864.3|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr16_-_11681023_11681145	0.022697	ZIC3_ZIC4	ENST00000570904.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000574701.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr11_+_128761363_128761382	0.0225528	ZIC3_ZIC4	ENST00000338350.4|KCNJ5|ENSG00000120457.7|potassium inwardly-rectifying channel, subfamily J, member 5
hg19_v2_chr20_-_56100155_56100163	0.0218098	ZIC3_ZIC4	ENST00000423479.3|CTCFL|ENSG00000124092.8|CCCTC-binding factor (zinc finger protein)-like 	ENST00000502686.2|CTCFL|ENSG00000124092.8|CCCTC-binding factor (zinc finger protein)-like 	ENST00000433949.3|CTCFL|ENSG00000124092.8|CCCTC-binding factor (zinc finger protein)-like 	ENST00000539382.1|CTCFL|ENSG00000124092.8|CCCTC-binding factor (zinc finger protein)-like 	ENST00000608903.1|CTCFL|ENSG00000124092.8|CCCTC-binding factor (zinc finger protein)-like
hg19_v2_chr2_-_172750733_172750762	0.0217611	ZIC3_ZIC4	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr21_+_46825032_46825091	0.0216616	ZIC3_ZIC4	ENST00000400337.2|COL18A1|ENSG00000182871.10|collagen, type XVIII, alpha 1
hg19_v2_chr15_-_71407806_71407827	0.0214034	ZIC3_ZIC4	ENST00000566432.1|CT62|ENSG00000225362.4|cancer/testis antigen 62 	ENST00000567117.1|CT62|ENSG00000225362.4|cancer/testis antigen 62
hg19_v2_chr13_-_52378231_52378277	0.0213673	ZIC3_ZIC4	ENST00000280056.2|DHRS12|ENSG00000102796.6|dehydrogenase/reductase (SDR family) member 12 	ENST00000444610.2|DHRS12|ENSG00000102796.6|dehydrogenase/reductase (SDR family) member 12
hg19_v2_chr2_-_219925189_219925189	0.0198454	ZIC3_ZIC4	ENST00000295731.6|IHH|ENSG00000163501.6|indian hedgehog
hg19_v2_chr19_+_17858509_17858529	0.0197142	ZIC3_ZIC4	ENST00000594202.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000252771.7|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000389133.4|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr15_-_71407833_71407846	0.0192255	ZIC3_ZIC4	ENST00000449977.2|CT62|ENSG00000225362.4|cancer/testis antigen 62
hg19_v2_chrX_-_49056635_49056718	0.0189528	ZIC3_ZIC4	ENST00000472598.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000538567.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000479808.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000263233.4|SYP|ENSG00000102003.6|synaptophysin
hg19_v2_chr17_+_48638371_48638449	0.0188001	ZIC3_ZIC4	ENST00000360761.4|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENST00000352832.5|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENST00000354983.4|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v2_chr10_-_61122220_61122358	0.0187256	ZIC3_ZIC4	ENST00000422313.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000435852.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000442566.3|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000373868.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000277705.6|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000373867.3|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000419214.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C
hg19_v2_chr9_-_33402506_33402643	0.0179658	ZIC3_ZIC4	ENST00000377425.4|AQP7|ENSG00000165269.8|aquaporin 7 	ENST00000537089.1|AQP7|ENSG00000165269.8|aquaporin 7 	ENST00000297988.1|AQP7|ENSG00000165269.8|aquaporin 7 	ENST00000539936.1|AQP7|ENSG00000165269.8|aquaporin 7 	ENST00000541274.1|AQP7|ENSG00000165269.8|aquaporin 7
hg19_v2_chr11_-_113345995_113346016	0.016943	ZIC3_ZIC4	ENST00000355319.2|DRD2|ENSG00000149295.9|dopamine receptor D2 	ENST00000542616.1|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr6_+_32006042_32006084	0.0164986	ZIC3_ZIC4	ENST00000418967.2|CYP21A2|ENSG00000231852.2|cytochrome P450, family 21, subfamily A, polypeptide 2
hg19_v2_chr9_+_131580734_131580764	0.0161974	ZIC3_ZIC4	ENST00000372642.4|ENDOG|ENSG00000167136.6|endonuclease G
hg19_v2_chr8_-_80993010_80993073	0.0155907	ZIC3_ZIC4	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr21_-_45682099_45682265	0.0150421	ZIC3_ZIC4	ENST00000270172.3|DNMT3L|ENSG00000142182.4|DNA (cytosine-5-)-methyltransferase 3-like 	ENST00000418993.1|DNMT3L|ENSG00000142182.4|DNA (cytosine-5-)-methyltransferase 3-like
hg19_v2_chr10_+_134145614_134145724	0.0148498	ZIC3_ZIC4	ENST00000368615.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000392638.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000344079.5|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000356571.4|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000368614.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr6_+_144904334_144904368	0.0141941	ZIC3_ZIC4	ENST00000367526.4|UTRN|ENSG00000152818.14|utrophin
hg19_v2_chr10_-_88854518_88854634	0.0140973	ZIC3_ZIC4	ENST00000277865.4|GLUD1|ENSG00000148672.7|glutamate dehydrogenase 1
hg19_v2_chr5_-_179499108_179499147	0.0133915	ZIC3_ZIC4	ENST00000521389.1|RNF130|ENSG00000113269.9|ring finger protein 130
hg19_v2_chr18_+_46065483_46065540	0.0131577	ZIC3_ZIC4	ENST00000382998.4|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr19_-_18717627_18717660	0.0128528	ZIC3_ZIC4	ENST00000392386.3|CRLF1|ENSG00000006016.6|cytokine receptor-like factor 1
hg19_v2_chr9_-_114246635_114246676	0.0122889	ZIC3_ZIC4	ENST00000338205.5|KIAA0368|ENSG00000136813.10|KIAA0368
hg19_v2_chr7_-_100808394_100808436	0.0111127	ZIC3_ZIC4	ENST00000445482.2|VGF|ENSG00000128564.5|VGF nerve growth factor inducible
hg19_v2_chr16_-_69364467_69364516	0.00971901	ZIC3_ZIC4	ENST00000288022.1|PDF|ENSG00000258429.1|peptide deformylase (mitochondrial)
hg19_v2_chr4_-_113437328_113437337	0.00945836	ZIC3_ZIC4	ENST00000313341.3|NEUROG2|ENSG00000178403.3|neurogenin 2
hg19_v2_chr12_-_125052010_125052172	0.00935952	ZIC3_ZIC4	ENST00000458234.1|NCOR2|ENSG00000196498.9|nuclear receptor corepressor 2
hg19_v2_chr3_+_54156570_54156627	0.00882678	ZIC3_ZIC4	ENST00000415676.2|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr1_-_146644122_146644176	0.00828718	ZIC3_ZIC4	ENST00000254101.3|PRKAB2|ENSG00000131791.6|protein kinase, AMP-activated, beta 2 non-catalytic subunit
hg19_v2_chr11_+_2466218_2466255	0.00819192	ZIC3_ZIC4	ENST00000155840.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr3_+_54156664_54156694	0.00762944	ZIC3_ZIC4	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr17_-_3182268_3182268	0.00688034	ZIC3_ZIC4	ENST00000408891.2|OR3A2|ENSG00000221882.2|olfactory receptor, family 3, subfamily A, member 2
hg19_v2_chr10_+_71561649_71561703	0.00687849	ZIC3_ZIC4	ENST00000398978.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000354547.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000357811.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr17_-_74733404_74733456	0.00682591	ZIC3_ZIC4	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr17_+_7531281_7531320	0.00632641	ZIC3_ZIC4	ENST00000575729.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000340624.5|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr7_-_44580861_44580914	0.00582271	ZIC3_ZIC4	ENST00000546276.1|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000289547.4|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000381160.3|NPC1L1|ENSG00000015520.10|NPC1-like 1 	ENST00000423141.1|NPC1L1|ENSG00000015520.10|NPC1-like 1
hg19_v2_chr12_+_20848377_20848399	0.0056174	ZIC3_ZIC4	ENST00000540354.1|SLCO1C1|ENSG00000139155.4|solute carrier organic anion transporter family, member 1C1 	ENST00000266509.2|SLCO1C1|ENSG00000139155.4|solute carrier organic anion transporter family, member 1C1 	ENST00000381552.1|SLCO1C1|ENSG00000139155.4|solute carrier organic anion transporter family, member 1C1
hg19_v2_chr19_+_56165480_56165518	0.00557805	ZIC3_ZIC4	ENST00000450554.2|U2AF2|ENSG00000063244.8|U2 small nuclear RNA auxiliary factor 2
hg19_v2_chr19_+_55105085_55105136	0.00549839	ZIC3_ZIC4	ENST00000251372.3|LILRA1|ENSG00000104974.6|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1 	ENST00000453777.1|LILRA1|ENSG00000104974.6|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1
hg19_v2_chr2_-_98280383_98280570	0.00436145	ZIC3_ZIC4	ENST00000289228.5|ACTR1B|ENSG00000115073.6|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
hg19_v2_chr9_+_88556036_88556101	0.00325066	ZIC3_ZIC4	ENST00000361671.5|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENST00000416045.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr7_+_115850547_115850626	0.00131148	ZIC3_ZIC4	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr1_-_151798546_151798590	0.000357447	ZIC3_ZIC4	ENST00000356728.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr4_-_24586140_24586188	5.70967e-05	ZIC3_ZIC4	ENST00000336812.4|DHX15|ENSG00000109606.8|DEAH (Asp-Glu-Ala-His) box helicase 15
hg19_v2_chrX_+_135579238_135579416	2.54574e-05	ZIC3_ZIC4	ENST00000535601.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000448450.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1 	ENST00000425695.1|HTATSF1|ENSG00000102241.7|HIV-1 Tat specific factor 1
